Lcy02g004240 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy02g004240
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	60S ribosomal protein L31
Location	Chr02: 5604053 .. 5605897 (+)
RNA-Seq Expression	Lcy02g004240
Synteny	Lcy02g004240

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTTGCTAGGGTTTATCTTCAGCGGCAGAGGGTCAGTTTGCAGAGCCGCGAGCAAAAATGGCGGATAAATCAGCTAAGGCAAGAAAAAGTGAGGTCGTAACCAGGGAGTACACCATCAATCTCCACAAACGCTTGCACGGATGGTAACTCTCTCTCTCTCTCTCTCTCTGATATGCCGTTTAGATCTGGTGAAAAGTGTAGACGAAGACGATTTAACTTAAGTTCAGTTCTCTGGCTCCTTTATTTGGTTCGTCATGTTTTAAGTAGAAACTTCAGCTGTAGGTTGTTTCATCGGCATGAATTTGGTCCTTCTGGTGATTTAATTTCAAAGTTTAACTATGCGAACCCACTGTTTCGGTTTCAAGTCGTCAGATATGAAAATAAGGTTTTGTTAAATAGCATATCTTTGAATTTAATCTTCTGTTCATGGGCTGTGTTGTTGAAGTGACATATTATTGCCTATTGTGATTGTTGATTCGACTGAATTGGTGGGATTGAGGGGGGCTCGATGATCTTTATTGTTGTTAGTAGTTTGTGTAATTTGGGTTGTTGGGAGTGTAGTTGCTTGTGGCACTGTTAATTTTGCTTTCCATGATAGGAGTTTTGGTTCTTAACGAACAACTGATGTGATTATATGTCACATTACATCTGCAAGGGCTTCTAGGCTACACAAGGTTCTCATAGTTCATCTTGAAAGGCCTATATCTTCAATTTTATGGTCCTAGAAAAATATCCATACGAGTAGCTATGTGTTCATATTAGTATTCATTTGCTTTCTTGAGAGATAATTGACACTTTCGTGCTGTTTCTGAACCTGTGTGCATGTTTGAACCGCAACATATCATTGGTAAATCAACGTGTTCTCAATATGTTCGCTTCACTTTTTGTCTCTATTTGGTTTATTCAATAGATAGATGAATTTCTAATTTGGTGCTGGCTTCTGTCCCTGCATTCCCTTCCCTGCTTTGTTTCTGATGGAATCAAACTGTACTTTCTTATGACAAAATGTCGTTATTAATAATATTTTGACGTGCCAATTGAAGAAGTTTCTAGCTAGTGTCATTGATAATGGCTTAGAACTAATGAAATGAACTGATTCTCATTTGTCATGTATTCTTATTTACTGGAAAACAGTGTAAGTTCTAGAAAAGATATCTTTTTCCCAATGGTAGCATTCTCGTTTTTAAGCATGACTGACTCAGCTTCAATCTCTCTTTTTTTTTGAATTTTGTTGCCTTGGAATTAGTCCTTGATTCCAATTCCTTGTATTTTTAATCTTGTTGTATGCATTTTGTTTTCTTGATTGCTTTTAGCGACTCCTTATTCTCAATCCTTCTTATGCAGCACATTCAAGAAGAAGGCACCGAAGGCTATTAAAGAACTCAGAAAGTTTGCTCAGAATGCTATGGGTACCACTGATGTTAGAGTGGACGTGAAACTTAACAAGCATATATGGAGTCGTGGAATTAGAAGTGTGCCAAGGAGGGTCCGTGTCCGCATTGCACGGAAGCGTAACGATGAGGAAGATGCCACGGAGGAATTCTATTCCTTAGTAACTGTAGCAGATGTACCTGCAGAGGGATTGAAGGGCTTGGGTACCAAGGTCATTGATGAAGAGGACTAGATTAGCTTGCGAAAACTAGGTAAATTTTTGTTATGTTATTGTCTCACAGATCCATTTTTAGTTGAGGTTTTTTTGCAACTTTAGCGAAGAAATTGTTTATTTCAACCATTAATGAGTTTTGTATTGAACTTCATGTGATTTATACTTTCAGTGATTCATGTGTCATGTTATGGATTCTGACGTAGACCATCAATCTGATATAGAAAAATGATCACTGATGC

mRNA sequence

GTTTGCTAGGGTTTATCTTCAGCGGCAGAGGGTCAGTTTGCAGAGCCGCGAGCAAAAATGGCGGATAAATCAGCTAAGGCAAGAAAAAGTGAGGTCGTAACCAGGGAGTACACCATCAATCTCCACAAACGCTTGCACGGATGCACATTCAAGAAGAAGGCACCGAAGGCTATTAAAGAACTCAGAAAGTTTGCTCAGAATGCTATGGGTACCACTGATGTTAGAGTGGACGTGAAACTTAACAAGCATATATGGAGTCGTGGAATTAGAAGTGTGCCAAGGAGGGTCCGTGTCCGCATTGCACGGAAGCGTAACGATGAGGAAGATGCCACGGAGGAATTCTATTCCTTAGTAACTGTAGCAGATGTACCTGCAGAGGGATTGAAGGGCTTGGGTACCAAGGTCATTGATGAAGAGGACTAGATTAGCTTGCGAAAACTAGGTAAATTTTTGTTATGTTATTGTCTCACAGATCCATTTTTAGTTGAGGTTTTTTTGCAACTTTAGCGAAGAAATTGTTTATTTCAACCATTAATGAGTTTTGTATTGAACTTCATGTGATTTATACTTTCAGTGATTCATGTGTCATGTTATGGATTCTGACGTAGACCATCAATCTGATATAGAAAAATGATCACTGATGC

Coding sequence (CDS)

ATGGCGGATAAATCAGCTAAGGCAAGAAAAAGTGAGGTCGTAACCAGGGAGTACACCATCAATCTCCACAAACGCTTGCACGGATGCACATTCAAGAAGAAGGCACCGAAGGCTATTAAAGAACTCAGAAAGTTTGCTCAGAATGCTATGGGTACCACTGATGTTAGAGTGGACGTGAAACTTAACAAGCATATATGGAGTCGTGGAATTAGAAGTGTGCCAAGGAGGGTCCGTGTCCGCATTGCACGGAAGCGTAACGATGAGGAAGATGCCACGGAGGAATTCTATTCCTTAGTAACTGTAGCAGATGTACCTGCAGAGGGATTGAAGGGCTTGGGTACCAAGGTCATTGATGAAGAGGACTAG

Protein sequence

MADKSAKARKSEVVTREYTINLHKRLHGCTFKKKAPKAIKELRKFAQNAMGTTDVRVDVKLNKHIWSRGIRSVPRRVRVRIARKRNDEEDATEEFYSLVTVADVPAEGLKGLGTKVIDEED

Homology

[Close]

BLAST of Lcy02g004240 vs. ExPASy Swiss-Prot
Match: Q9M573 (60S ribosomal protein L31 OS=Perilla frutescens OX=48386 GN=RPL31 PE=2 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 4.2e-54
Identity = 104/121 (85.95%), Postives = 113/121 (93.39%), Query Frame = 0


Query: 1   MADKSAKARKSEVVTREYTINLHKRLHGCTFKKKAPKAIKELRKFAQNAMGTTDVRVDVK 60
           MADK +K RK EVV+REYTINLHKRLHGCTFKKKAPKAIKE+RKFAQ AMGTTDVRVDVK
Sbjct: 1   MADKGSKPRKEEVVSREYTINLHKRLHGCTFKKKAPKAIKEIRKFAQKAMGTTDVRVDVK 60

Query: 61  LNKHIWSRGIRSVPRRVRVRIARKRNDEEDATEEFYSLVTVADVPAEGLKGLGTKVIDEE 120
           LNKHIWSRGIRSVPRR+RVRIARKRND+EDA EE YSLVTVA++P  GLKGLGT+VIDEE
Sbjct: 61  LNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPEGGLKGLGTQVIDEE 120

Query: 121 D 122
           +
Sbjct: 121 E 121

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BLAST of Lcy02g004240 vs. ExPASy Swiss-Prot
Match: P46290 (60S ribosomal protein L31 OS=Nicotiana glutinosa OX=35889 GN=RPL31 PE=2 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 5.6e-51
Identity = 101/121 (83.47%), Postives = 111/121 (91.74%), Query Frame = 0


Query: 1   MADKSAKARKSEVVTREYTINLHKRLHGCTFKKKAPKAIKELRKFAQNAMGTTDVRVDVK 60
           M+DK+ K RK EVVTREYTINLHKRLH CTFKKKAP AIKE+RKFAQ AMGT DVRVDVK
Sbjct: 1   MSDKT-KGRKEEVVTREYTINLHKRLHSCTFKKKAPTAIKEIRKFAQKAMGTKDVRVDVK 60

Query: 61  LNKHIWSRGIRSVPRRVRVRIARKRNDEEDATEEFYSLVTVADVPAEGLKGLGTKVIDEE 120
           LNK IWSRGIRSVPRRVRVRIARKRND+EDA EE YSLVTVA++PA+GLKGLGTK+I++E
Sbjct: 61  LNKQIWSRGIRSVPRRVRVRIARKRNDDEDAKEELYSLVTVAEIPAKGLKGLGTKIIEDE 120

Query: 121 D 122
           D
Sbjct: 121 D 120

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BLAST of Lcy02g004240 vs. ExPASy Swiss-Prot
Match: P51420 (60S ribosomal protein L31-3 OS=Arabidopsis thaliana OX=3702 GN=RPL31C PE=3 SV=2)

HSP 1 Score: 194.5 bits (493), Expect = 6.9e-49
Identity = 93/115 (80.87%), Postives = 105/115 (91.30%), Query Frame = 0


Query: 7   KARKSEVVTREYTINLHKRLHGCTFKKKAPKAIKELRKFAQNAMGTTDVRVDVKLNKHIW 66
           K RK EV+TREYTINLH+RLH CTFKKKAPKAIKE+RKFA+ AMGT DVRVDVKLNK IW
Sbjct: 5   KGRKEEVITREYTINLHRRLHKCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKQIW 64

Query: 67  SRGIRSVPRRVRVRIARKRNDEEDATEEFYSLVTVADVPAEGLKGLGTKVIDEED 122
           S+GIR  PRR+RVR+ARKRND+EDA EEF+SLVTVA++PAEGL GLGTKVI+EED
Sbjct: 65  SKGIRGPPRRIRVRVARKRNDDEDAKEEFFSLVTVAEIPAEGLSGLGTKVIEEED 119

[Close]

BLAST of Lcy02g004240 vs. ExPASy Swiss-Prot
Match: O65071 (60S ribosomal protein L31 OS=Picea mariana OX=3335 GN=RPL31 PE=2 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 9.0e-49
Identity = 92/118 (77.97%), Postives = 108/118 (91.53%), Query Frame = 0


Query: 4   KSAKARKSEVVTREYTINLHKRLHGCTFKKKAPKAIKELRKFAQNAMGTTDVRVDVKLNK 63
           +  K+R++EV TREYTINLH+RLHGCTFKK APKA+KE+RKFAQ AMGTTDVR+DVKLNK
Sbjct: 3   EKGKSRRNEVATREYTINLHRRLHGCTFKKMAPKAVKEIRKFAQKAMGTTDVRLDVKLNK 62

Query: 64  HIWSRGIRSVPRRVRVRIARKRNDEEDATEEFYSLVTVADVPAEGLKGLGTKVIDEED 122
            +WSRGIRSVPRR+RVRI+RKRNDEEDA +E YS+VTVA+VP EGL GLGTK+I+EED
Sbjct: 63  AVWSRGIRSVPRRMRVRISRKRNDEEDAKDELYSIVTVAEVPPEGLTGLGTKIIEEED 120

[Close]

BLAST of Lcy02g004240 vs. ExPASy Swiss-Prot
Match: Q9STR1 (60S ribosomal protein L31-2 OS=Arabidopsis thaliana OX=3702 GN=RPL31B PE=3 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 1.5e-48
Identity = 92/115 (80.00%), Postives = 104/115 (90.43%), Query Frame = 0


Query: 7   KARKSEVVTREYTINLHKRLHGCTFKKKAPKAIKELRKFAQNAMGTTDVRVDVKLNKHIW 66
           K RK EVVTREYTINLH+RLH CTFKKKAPKAIKE+RKFA+  MGT DVRVDVKLNK IW
Sbjct: 5   KGRKEEVVTREYTINLHRRLHSCTFKKKAPKAIKEIRKFAEKEMGTKDVRVDVKLNKQIW 64

Query: 67  SRGIRSVPRRVRVRIARKRNDEEDATEEFYSLVTVADVPAEGLKGLGTKVIDEED 122
           S+GIR  PRR+RVR+ARKRND+EDA EEF+SLVTVA++PAEGL GLGTK+I+EED
Sbjct: 65  SKGIRGPPRRIRVRVARKRNDDEDAKEEFFSLVTVAEIPAEGLSGLGTKIIEEED 119

[Close]

BLAST of Lcy02g004240 vs. ExPASy TrEMBL
Match: A0A6J1DGM1 (60S ribosomal protein L31 OS=Momordica charantia OX=3673 GN=LOC111020269 PE=3 SV=1)

HSP 1 Score: 228.4 bits (581), Expect = 1.6e-56
Identity = 115/121 (95.04%), Postives = 118/121 (97.52%), Query Frame = 0


Query: 1   MADKSAKARKSEVVTREYTINLHKRLHGCTFKKKAPKAIKELRKFAQNAMGTTDVRVDVK 60
           MADKSAKARKSEVVTREYT+NLHKRLHGCTFKKKAP AIKELRKFAQ AMGTTDVRVDVK
Sbjct: 1   MADKSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPNAIKELRKFAQKAMGTTDVRVDVK 60

Query: 61  LNKHIWSRGIRSVPRRVRVRIARKRNDEEDATEEFYSLVTVADVPAEGLKGLGTKVIDEE 120
           LNKHIWSRGIRSVPRRVRVRIA+KRNDEEDA EEFYSLVTVA+VPAEGLKGLGTKVIDEE
Sbjct: 61  LNKHIWSRGIRSVPRRVRVRIAQKRNDEEDAKEEFYSLVTVAEVPAEGLKGLGTKVIDEE 120

Query: 121 D 122
           D
Sbjct: 121 D 121

[Close]

BLAST of Lcy02g004240 vs. ExPASy TrEMBL
Match: A0A218X1Y2 (60S ribosomal protein L31 OS=Punica granatum OX=22663 GN=LOC116211037 PE=3 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 1.9e-54
Identity = 108/121 (89.26%), Postives = 115/121 (95.04%), Query Frame = 0


Query: 1   MADKSAKARKSEVVTREYTINLHKRLHGCTFKKKAPKAIKELRKFAQNAMGTTDVRVDVK 60
           MAD+ +K RK EVVTREYTINLHKRLHGCTFKKKAPKAIKE+RKFAQ AMGTTDVRVDVK
Sbjct: 1   MADRKSKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAQKAMGTTDVRVDVK 60

Query: 61  LNKHIWSRGIRSVPRRVRVRIARKRNDEEDATEEFYSLVTVADVPAEGLKGLGTKVIDEE 120
           LNKH+WSRGIRSVPRRVRVR+ARKRNDEEDA EEFYSLVTVA++P EGLKGLGTKVIDEE
Sbjct: 61  LNKHVWSRGIRSVPRRVRVRVARKRNDEEDAKEEFYSLVTVAEIPPEGLKGLGTKVIDEE 120

Query: 121 D 122
           D
Sbjct: 121 D 121

[Close]

BLAST of Lcy02g004240 vs. ExPASy TrEMBL
Match: I3NMM3 (60S ribosomal protein L31A OS=Hevea brasiliensis OX=3981 GN=RPL31A PE=2 SV=1)

HSP 1 Score: 219.9 bits (559), Expect = 5.7e-54
Identity = 109/121 (90.08%), Postives = 114/121 (94.21%), Query Frame = 0


Query: 1   MADKSAKARKSEVVTREYTINLHKRLHGCTFKKKAPKAIKELRKFAQNAMGTTDVRVDVK 60
           M +K+AK RK EVVTREYTINLHKRLHGCTFKKKAPKAIKE+RKFAQ AMGTTDVRVDVK
Sbjct: 1   MVEKAAKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAQKAMGTTDVRVDVK 60

Query: 61  LNKHIWSRGIRSVPRRVRVRIARKRNDEEDATEEFYSLVTVADVPAEGLKGLGTKVIDEE 120
           LNKHIWSRGIRSVPRRVRVRIARKRNDEEDA EEFYSLVTV +VP+EG KGLGTKVIDEE
Sbjct: 61  LNKHIWSRGIRSVPRRVRVRIARKRNDEEDAKEEFYSLVTVTEVPSEGFKGLGTKVIDEE 120

Query: 121 D 122
           D
Sbjct: 121 D 121

[Close]

BLAST of Lcy02g004240 vs. ExPASy TrEMBL
Match: A0A6P4A0Q9 (60S ribosomal protein L31 OS=Ziziphus jujuba OX=326968 GN=LOC107423246 PE=3 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 9.6e-54
Identity = 108/121 (89.26%), Postives = 114/121 (94.21%), Query Frame = 0


Query: 1   MADKSAKARKSEVVTREYTINLHKRLHGCTFKKKAPKAIKELRKFAQNAMGTTDVRVDVK 60
           M DK++K RK EVVTREYT+NLHKRLHGCTFKKKAPKAIKE+RKFAQ AMGTTDVRVDVK
Sbjct: 1   MVDKTSKGRKEEVVTREYTVNLHKRLHGCTFKKKAPKAIKEIRKFAQKAMGTTDVRVDVK 60

Query: 61  LNKHIWSRGIRSVPRRVRVRIARKRNDEEDATEEFYSLVTVADVPAEGLKGLGTKVIDEE 120
           LNKH+WSRGIRSVPRRVRVRIARKRNDEED  EEFYSLVTVA+VP EGLKGLGTKVIDEE
Sbjct: 61  LNKHLWSRGIRSVPRRVRVRIARKRNDEEDNKEEFYSLVTVAEVPPEGLKGLGTKVIDEE 120

Query: 121 D 122
           D
Sbjct: 121 D 121

[Close]

BLAST of Lcy02g004240 vs. ExPASy TrEMBL
Match: A0A7N2LCX9 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=3 SV=1)

HSP 1 Score: 218.4 bits (555), Expect = 1.6e-53
Identity = 107/121 (88.43%), Postives = 114/121 (94.21%), Query Frame = 0


Query: 1   MADKSAKARKSEVVTREYTINLHKRLHGCTFKKKAPKAIKELRKFAQNAMGTTDVRVDVK 60
           M DK +K RK EVVTREYTINLHKRLHGCTFKKKAPKAIKE+RKFAQ AMGTTDVRVDVK
Sbjct: 1   MVDKGSKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAQKAMGTTDVRVDVK 60

Query: 61  LNKHIWSRGIRSVPRRVRVRIARKRNDEEDATEEFYSLVTVADVPAEGLKGLGTKVIDEE 120
           LNKH+WSRGIRSVPRRVRVRIARKRNDEEDA EEF+SLVTVA++P EGLKGLGTKVI+EE
Sbjct: 61  LNKHVWSRGIRSVPRRVRVRIARKRNDEEDAKEEFFSLVTVAEIPPEGLKGLGTKVIEEE 120

Query: 121 D 122
           D
Sbjct: 121 D 121

[Close]

BLAST of Lcy02g004240 vs. NCBI nr
Match: XP_038903425.1 (60S ribosomal protein L31 [Benincasa hispida])

HSP 1 Score: 228.8 bits (582), Expect = 2.5e-56
Identity = 115/121 (95.04%), Postives = 119/121 (98.35%), Query Frame = 0


Query: 1   MADKSAKARKSEVVTREYTINLHKRLHGCTFKKKAPKAIKELRKFAQNAMGTTDVRVDVK 60
           MADKSAKARKSEVVTREYT+NLHKRLHGCTFKKKAPKAIKELRKFAQ AMGTTDVRVDVK
Sbjct: 1   MADKSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPKAIKELRKFAQKAMGTTDVRVDVK 60

Query: 61  LNKHIWSRGIRSVPRRVRVRIARKRNDEEDATEEFYSLVTVADVPAEGLKGLGTKVIDEE 120
           LNK+IWSRGIRSVPRRVRVRIARKRNDEEDA EEFYSL+TVA+VPAEGLKGLGTKVIDEE
Sbjct: 61  LNKNIWSRGIRSVPRRVRVRIARKRNDEEDAKEEFYSLITVAEVPAEGLKGLGTKVIDEE 120

Query: 121 D 122
           D
Sbjct: 121 D 121

[Close]

BLAST of Lcy02g004240 vs. NCBI nr
Match: XP_022152572.1 (60S ribosomal protein L31 [Momordica charantia])

HSP 1 Score: 228.4 bits (581), Expect = 3.3e-56
Identity = 115/121 (95.04%), Postives = 118/121 (97.52%), Query Frame = 0


Query: 1   MADKSAKARKSEVVTREYTINLHKRLHGCTFKKKAPKAIKELRKFAQNAMGTTDVRVDVK 60
           MADKSAKARKSEVVTREYT+NLHKRLHGCTFKKKAP AIKELRKFAQ AMGTTDVRVDVK
Sbjct: 1   MADKSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPNAIKELRKFAQKAMGTTDVRVDVK 60

Query: 61  LNKHIWSRGIRSVPRRVRVRIARKRNDEEDATEEFYSLVTVADVPAEGLKGLGTKVIDEE 120
           LNKHIWSRGIRSVPRRVRVRIA+KRNDEEDA EEFYSLVTVA+VPAEGLKGLGTKVIDEE
Sbjct: 61  LNKHIWSRGIRSVPRRVRVRIAQKRNDEEDAKEEFYSLVTVAEVPAEGLKGLGTKVIDEE 120

Query: 121 D 122
           D
Sbjct: 121 D 121

[Close]

BLAST of Lcy02g004240 vs. NCBI nr
Match: XP_023525745.1 (60S ribosomal protein L31-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 228.4 bits (581), Expect = 3.3e-56
Identity = 115/121 (95.04%), Postives = 118/121 (97.52%), Query Frame = 0


Query: 1   MADKSAKARKSEVVTREYTINLHKRLHGCTFKKKAPKAIKELRKFAQNAMGTTDVRVDVK 60
           MADKSAKARKSEVVTREYT+NLHKRLHGCTFKKKAPKAIKELRKFAQNAMGTTDVRVDVK
Sbjct: 1   MADKSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPKAIKELRKFAQNAMGTTDVRVDVK 60

Query: 61  LNKHIWSRGIRSVPRRVRVRIARKRNDEEDATEEFYSLVTVADVPAEGLKGLGTKVIDEE 120
           LNKHIWSRGIRSVPRRVRVRIARKRNDEEDA EEFYSLVTVA+VPAEG KGL TKVIDEE
Sbjct: 61  LNKHIWSRGIRSVPRRVRVRIARKRNDEEDAKEEFYSLVTVAEVPAEGFKGLDTKVIDEE 120

Query: 121 D 122
           +
Sbjct: 121 E 121

[Close]

BLAST of Lcy02g004240 vs. NCBI nr
Match: XP_031401093.1 (60S ribosomal protein L31 [Punica granatum] >OWM78362.1 hypothetical protein CDL15_Pgr016086 [Punica granatum] >PKI31655.1 hypothetical protein CRG98_047939 [Punica granatum])

HSP 1 Score: 221.5 bits (563), Expect = 4.0e-54
Identity = 108/121 (89.26%), Postives = 115/121 (95.04%), Query Frame = 0


Query: 1   MADKSAKARKSEVVTREYTINLHKRLHGCTFKKKAPKAIKELRKFAQNAMGTTDVRVDVK 60
           MAD+ +K RK EVVTREYTINLHKRLHGCTFKKKAPKAIKE+RKFAQ AMGTTDVRVDVK
Sbjct: 1   MADRKSKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAQKAMGTTDVRVDVK 60

Query: 61  LNKHIWSRGIRSVPRRVRVRIARKRNDEEDATEEFYSLVTVADVPAEGLKGLGTKVIDEE 120
           LNKH+WSRGIRSVPRRVRVR+ARKRNDEEDA EEFYSLVTVA++P EGLKGLGTKVIDEE
Sbjct: 61  LNKHVWSRGIRSVPRRVRVRVARKRNDEEDAKEEFYSLVTVAEIPPEGLKGLGTKVIDEE 120

Query: 121 D 122
           D
Sbjct: 121 D 121

[Close]

BLAST of Lcy02g004240 vs. NCBI nr
Match: XP_021658421.1 (60S ribosomal protein L31 [Hevea brasiliensis] >ADR71260.1 60S ribosomal protein L31A [Hevea brasiliensis])

HSP 1 Score: 219.9 bits (559), Expect = 1.2e-53
Identity = 109/121 (90.08%), Postives = 114/121 (94.21%), Query Frame = 0


Query: 1   MADKSAKARKSEVVTREYTINLHKRLHGCTFKKKAPKAIKELRKFAQNAMGTTDVRVDVK 60
           M +K+AK RK EVVTREYTINLHKRLHGCTFKKKAPKAIKE+RKFAQ AMGTTDVRVDVK
Sbjct: 1   MVEKAAKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAQKAMGTTDVRVDVK 60

Query: 61  LNKHIWSRGIRSVPRRVRVRIARKRNDEEDATEEFYSLVTVADVPAEGLKGLGTKVIDEE 120
           LNKHIWSRGIRSVPRRVRVRIARKRNDEEDA EEFYSLVTV +VP+EG KGLGTKVIDEE
Sbjct: 61  LNKHIWSRGIRSVPRRVRVRIARKRNDEEDAKEEFYSLVTVTEVPSEGFKGLGTKVIDEE 120

Query: 121 D 122
           D
Sbjct: 121 D 121

[Close]

BLAST of Lcy02g004240 vs. TAIR 10
Match: AT5G56710.1 (Ribosomal protein L31e family protein )

HSP 1 Score: 194.5 bits (493), Expect = 4.9e-50
Identity = 93/115 (80.87%), Postives = 105/115 (91.30%), Query Frame = 0


Query: 7   KARKSEVVTREYTINLHKRLHGCTFKKKAPKAIKELRKFAQNAMGTTDVRVDVKLNKHIW 66
           K RK EV+TREYTINLH+RLH CTFKKKAPKAIKE+RKFA+ AMGT DVRVDVKLNK IW
Sbjct: 5   KGRKEEVITREYTINLHRRLHKCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKQIW 64

Query: 67  SRGIRSVPRRVRVRIARKRNDEEDATEEFYSLVTVADVPAEGLKGLGTKVIDEED 122
           S+GIR  PRR+RVR+ARKRND+EDA EEF+SLVTVA++PAEGL GLGTKVI+EED
Sbjct: 65  SKGIRGPPRRIRVRVARKRNDDEDAKEEFFSLVTVAEIPAEGLSGLGTKVIEEED 119

[Close]

BLAST of Lcy02g004240 vs. TAIR 10
Match: AT4G26230.1 (Ribosomal protein L31e family protein )

HSP 1 Score: 193.4 bits (490), Expect = 1.1e-49
Identity = 92/115 (80.00%), Postives = 104/115 (90.43%), Query Frame = 0


Query: 7   KARKSEVVTREYTINLHKRLHGCTFKKKAPKAIKELRKFAQNAMGTTDVRVDVKLNKHIW 66
           K RK EVVTREYTINLH+RLH CTFKKKAPKAIKE+RKFA+  MGT DVRVDVKLNK IW
Sbjct: 5   KGRKEEVVTREYTINLHRRLHSCTFKKKAPKAIKEIRKFAEKEMGTKDVRVDVKLNKQIW 64

Query: 67  SRGIRSVPRRVRVRIARKRNDEEDATEEFYSLVTVADVPAEGLKGLGTKVIDEED 122
           S+GIR  PRR+RVR+ARKRND+EDA EEF+SLVTVA++PAEGL GLGTK+I+EED
Sbjct: 65  SKGIRGPPRRIRVRVARKRNDDEDAKEEFFSLVTVAEIPAEGLSGLGTKIIEEED 119

[Close]

BLAST of Lcy02g004240 vs. TAIR 10
Match: AT2G19740.1 (Ribosomal protein L31e family protein )

HSP 1 Score: 190.7 bits (483), Expect = 7.1e-49
Identity = 92/118 (77.97%), Postives = 104/118 (88.14%), Query Frame = 0


Query: 4   KSAKARKSEVVTREYTINLHKRLHGCTFKKKAPKAIKELRKFAQNAMGTTDVRVDVKLNK 63
           +  K RK EVVTREYTINLH+RLH CTFKKKAP AIKE+RKFA  AMGT DVRVDVKLNK
Sbjct: 2   EKGKGRKEEVVTREYTINLHRRLHSCTFKKKAPNAIKEIRKFALKAMGTKDVRVDVKLNK 61

Query: 64  HIWSRGIRSVPRRVRVRIARKRNDEEDATEEFYSLVTVADVPAEGLKGLGTKVIDEED 122
            IWS+GIR  PRR+RVR+ARKRND+EDA EEF+SLVTVA++PAEGL GLGTKVI+EE+
Sbjct: 62  QIWSKGIRGPPRRIRVRVARKRNDDEDAKEEFFSLVTVAEIPAEGLSGLGTKVIEEEE 119

[Close]

BLAST of Lcy02g004240 vs. TAIR 10
Match: AT5G56710.2 (Ribosomal protein L31e family protein )

HSP 1 Score: 124.0 bits (310), Expect = 8.1e-29
Identity = 67/115 (58.26%), Postives = 75/115 (65.22%), Query Frame = 0


Query: 7   KARKSEVVTREYTINLHKRLHGCTFKKKAPKAIKELRKFAQNAMGTTDVRVDVKLNKHIW 66
           K RK EV+TREYTINLH+RLH CTFKKKAPKAIKE+RKFA+ AMGT DVRVD        
Sbjct: 5   KGRKEEVITREYTINLHRRLHKCTFKKKAPKAIKEIRKFAEKAMGTKDVRVD-------- 64

Query: 67  SRGIRSVPRRVRVRIARKRNDEEDATEEFYSLVTVADVPAEGLKGLGTKVIDEED 122
                                     EEF+SLVTVA++PAEGL GLGTKVI+EED
Sbjct: 65  --------------------------EEFFSLVTVAEIPAEGLSGLGTKVIEEED 85

The following BLAST results are available for this feature:

BLAST of Lcy02g004240 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M573	4.2e-54	85.95	60S ribosomal protein L31 OS=Perilla frutescens OX=48386 GN=RPL31 PE=2 SV=1	[more]
P46290	5.6e-51	83.47	60S ribosomal protein L31 OS=Nicotiana glutinosa OX=35889 GN=RPL31 PE=2 SV=1	[more]
P51420	6.9e-49	80.87	60S ribosomal protein L31-3 OS=Arabidopsis thaliana OX=3702 GN=RPL31C PE=3 SV=2	[more]
O65071	9.0e-49	77.97	60S ribosomal protein L31 OS=Picea mariana OX=3335 GN=RPL31 PE=2 SV=1	[more]
Q9STR1	1.5e-48	80.00	60S ribosomal protein L31-2 OS=Arabidopsis thaliana OX=3702 GN=RPL31B PE=3 SV=1	[more]

BLAST of Lcy02g004240 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DGM1	1.6e-56	95.04	60S ribosomal protein L31 OS=Momordica charantia OX=3673 GN=LOC111020269 PE=3 SV...	[more]
A0A218X1Y2	1.9e-54	89.26	60S ribosomal protein L31 OS=Punica granatum OX=22663 GN=LOC116211037 PE=3 SV=1	[more]
I3NMM3	5.7e-54	90.08	60S ribosomal protein L31A OS=Hevea brasiliensis OX=3981 GN=RPL31A PE=2 SV=1	[more]
A0A6P4A0Q9	9.6e-54	89.26	60S ribosomal protein L31 OS=Ziziphus jujuba OX=326968 GN=LOC107423246 PE=3 SV=1	[more]
A0A7N2LCX9	1.6e-53	88.43	Uncharacterized protein OS=Quercus lobata OX=97700 PE=3 SV=1	[more]

BLAST of Lcy02g004240 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038903425.1	2.5e-56	95.04	60S ribosomal protein L31 [Benincasa hispida]	[more]
XP_022152572.1	3.3e-56	95.04	60S ribosomal protein L31 [Momordica charantia]	[more]
XP_023525745.1	3.3e-56	95.04	60S ribosomal protein L31-like [Cucurbita pepo subsp. pepo]	[more]
XP_031401093.1	4.0e-54	89.26	60S ribosomal protein L31 [Punica granatum] >OWM78362.1 hypothetical protein CDL...	[more]
XP_021658421.1	1.2e-53	90.08	60S ribosomal protein L31 [Hevea brasiliensis] >ADR71260.1 60S ribosomal protein...	[more]

BLAST of Lcy02g004240 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G56710.1	4.9e-50	80.87	Ribosomal protein L31e family protein	[more]
AT4G26230.1	1.1e-49	80.00	Ribosomal protein L31e family protein	[more]
AT2G19740.1	7.1e-49	77.97	Ribosomal protein L31e family protein	[more]
AT5G56710.2	8.1e-29	58.26	Ribosomal protein L31e family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000054	Ribosomal protein L31e	SMART	SM01380	Ribosomal_L31e_2	coord: 11..94 e-value: 1.0E-46 score: 171.2
IPR000054	Ribosomal protein L31e	PFAM	PF01198	Ribosomal_L31e	coord: 12..92 e-value: 7.5E-41 score: 138.2
IPR000054	Ribosomal protein L31e	PANTHER	PTHR10956	60S RIBOSOMAL PROTEIN L31	coord: 1..121
IPR000054	Ribosomal protein L31e	CDD	cd00463	Ribosomal_L31e	coord: 10..70 e-value: 1.75825E-25 score: 89.5508
IPR023621	Ribosomal protein L31e domain superfamily	GENE3D	3.10.440.10		coord: 8..121 e-value: 2.2E-48 score: 164.8
IPR023621	Ribosomal protein L31e domain superfamily	SUPERFAMILY	54575	Ribosomal protein L31e	coord: 12..92
None	No IPR available	PANTHER	PTHR10956:SF40	60S RIBOSOMAL PROTEIN L31	coord: 1..121
IPR020052	Ribosomal protein L31e, conserved site	PROSITE	PS01144	RIBOSOMAL_L31E	coord: 55..69

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy02g004240.1	Lcy02g004240.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0002181	cytoplasmic translation
biological_process	GO:0006412	translation
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003735	structural constituent of ribosome