Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTCAACGACCTTCTCTTCCAAATGCCGATTTCCTTTTCCTCTGCTCCAATTTCGCTCTTCCATGGCGGAATCTTCCGATAAAATCCTTCCGTCCAAAAACCGACTCCATTTTCTCCTCCGTTGCTTCGGATCTTCCCCAAAAGTTCACAGCCAGAAGGCTCCGGCGACCGGCCGACGGAACCGACGGGTTCCGTCGCTCAGGTTCCGATTCAACAAGTCCTCTGCAACTGTGCCGGTCGACGCCGCCGTGCCGGAGATCGCAGTGCTATGTGACGATGACGCCTCTTTTTCGCCGGACTTCAAGAAACCGCCGCCACCGCCGCCGGTTACGTCCAGAGCTCCGGCCGTCCGAGCCGAGATCGTCGAGTCGATAAAGCCGAGTCAAACTCGGAAGAAAACAGAGTCAACTCAGTCCGAATCCAAGGCAGAGAGAATTCCTCCGGCGAAAAGAACCGCCGCGTTGTTGCACTCCGTCTCTCTTCCTTCCCCGAGACTAAGCGGCCAAAAAGATTTGAAAAAAACAGTCTCTCATCTCCCCTGCGCCGCCGCGCCGCCGTCCTCCGACCGGCTGAAACCGGCGCCAAAGCCGTCGACGAATTCTCCGGCCACGAAATTCGATCCGGTGATTGTGATTGTTGCGCTGGCGATGGTGGTGCTGTGGGGGCGACTCTGCGCCATACTCTGCACGTCGGCGCTGTTTTACTTCGGCCGCCGGCGGAGGTCAGAAGTTGAACGAGACGGCGGCGGCGGCGGTTTTGGAAGGGTTTCTTGAGATGTTTACGGGAAGTTACGTTTGACGGTTATGGGAAACCGCCATGTGAGGAAAGCTTGGAGAATATTTTAATGGCGGAAGTGGCAGTTTGTTAAGCTGATTTTTGTAAATTAATGGCAAGAGTTCAAACATTGTAAAACTAATAATTTAACTTATAATATATATATATAAATAGTAAGAAAAATAAA
mRNA sequence
CTTCAACGACCTTCTCTTCCAAATGCCGATTTCCTTTTCCTCTGCTCCAATTTCGCTCTTCCATGGCGGAATCTTCCGATAAAATCCTTCCGTCCAAAAACCGACTCCATTTTCTCCTCCGTTGCTTCGGATCTTCCCCAAAAGTTCACAGCCAGAAGGCTCCGGCGACCGGCCGACGGAACCGACGGGTTCCGTCGCTCAGGTTCCGATTCAACAAGTCCTCTGCAACTGTGCCGGTCGACGCCGCCGTGCCGGAGATCGCAGTGCTATGTGACGATGACGCCTCTTTTTCGCCGGACTTCAAGAAACCGCCGCCACCGCCGCCGGTTACGTCCAGAGCTCCGGCCGTCCGAGCCGAGATCGTCGAGTCGATAAAGCCGAGTCAAACTCGGAAGAAAACAGAGTCAACTCAGTCCGAATCCAAGGCAGAGAGAATTCCTCCGGCGAAAAGAACCGCCGCGTTGTTGCACTCCGTCTCTCTTCCTTCCCCGAGACTAAGCGGCCAAAAAGATTTGAAAAAAACAGTCTCTCATCTCCCCTGCGCCGCCGCGCCGCCGTCCTCCGACCGGCTGAAACCGGCGCCAAAGCCGTCGACGAATTCTCCGGCCACGAAATTCGATCCGGTGATTGTGATTGTTGCGCTGGCGATGGTGGTGCTGTGGGGGCGACTCTGCGCCATACTCTGCACGTCGGCGCTGTTTTACTTCGGCCGCCGGCGGAGGTCAGAAGTTGAACGAGACGGCGGCGGCGGCGGTTTTGGAAGGGTTTCTTGAGATGTTTACGGGAAGTTACGTTTGACGGTTATGGGAAACCGCCATGTGAGGAAAGCTTGGAGAATATTTTAATGGCGGAAGTGGCAGTTTGTTAAGCTGATTTTTGTAAATTAATGGCAAGAGTTCAAACATTGTAAAACTAATAATTTAACTTATAATATATATATATAAATAGTAAGAAAAATAAA
Coding sequence (CDS)
ATGGCGGAATCTTCCGATAAAATCCTTCCGTCCAAAAACCGACTCCATTTTCTCCTCCGTTGCTTCGGATCTTCCCCAAAAGTTCACAGCCAGAAGGCTCCGGCGACCGGCCGACGGAACCGACGGGTTCCGTCGCTCAGGTTCCGATTCAACAAGTCCTCTGCAACTGTGCCGGTCGACGCCGCCGTGCCGGAGATCGCAGTGCTATGTGACGATGACGCCTCTTTTTCGCCGGACTTCAAGAAACCGCCGCCACCGCCGCCGGTTACGTCCAGAGCTCCGGCCGTCCGAGCCGAGATCGTCGAGTCGATAAAGCCGAGTCAAACTCGGAAGAAAACAGAGTCAACTCAGTCCGAATCCAAGGCAGAGAGAATTCCTCCGGCGAAAAGAACCGCCGCGTTGTTGCACTCCGTCTCTCTTCCTTCCCCGAGACTAAGCGGCCAAAAAGATTTGAAAAAAACAGTCTCTCATCTCCCCTGCGCCGCCGCGCCGCCGTCCTCCGACCGGCTGAAACCGGCGCCAAAGCCGTCGACGAATTCTCCGGCCACGAAATTCGATCCGGTGATTGTGATTGTTGCGCTGGCGATGGTGGTGCTGTGGGGGCGACTCTGCGCCATACTCTGCACGTCGGCGCTGTTTTACTTCGGCCGCCGGCGGAGGTCAGAAGTTGAACGAGACGGCGGCGGCGGCGGTTTTGGAAGGGTTTCTTGA
Protein sequence
MAESSDKILPSKNRLHFLLRCFGSSPKVHSQKAPATGRRNRRVPSLRFRFNKSSATVPVDAAVPEIAVLCDDDASFSPDFKKPPPPPPVTSRAPAVRAEIVESIKPSQTRKKTESTQSESKAERIPPAKRTAALLHSVSLPSPRLSGQKDLKKTVSHLPCAAAPPSSDRLKPAPKPSTNSPATKFDPVIVIVALAMVVLWGRLCAILCTSALFYFGRRRRSEVERDGGGGGFGRVS
Homology
BLAST of Lcy02g003810 vs. ExPASy TrEMBL
Match:
A0A6J1GBH7 (uncharacterized protein LOC111452650 OS=Cucurbita moschata OX=3662 GN=LOC111452650 PE=4 SV=1)
HSP 1 Score: 286.2 bits (731), Expect = 1.3e-73
Identity = 158/231 (68.40%), Postives = 181/231 (78.35%), Query Frame = 0
Query: 1 MAESSDKILPSKNRLHFLLRCFGSSPKVHSQKAPATGRRNRRVPSLRFRFNKSSATVPVD 60
MAE+S+K+ PSK LHFLLRCFGSSPKV ++K P TGRR+ R+PS RFRF KSSATVP+D
Sbjct: 1 MAEASEKMSPSKRPLHFLLRCFGSSPKVQTKKNPTTGRRDSRIPSPRFRFKKSSATVPID 60
Query: 61 AAVPEIAVLCDDDASFSPDFKKPPPPPPVTSRAPAVRAEIVESIKPSQTRKKTESTQSES 120
AVPEI V CDD ASFSP+FKKPPP P + SRAP VR +IVE IKPSQ KKTEST+S+
Sbjct: 61 VAVPEITVPCDDKASFSPEFKKPPPSPLIKSRAPTVRTKIVELIKPSQPWKKTESTRSDF 120
Query: 121 KAERIPPAKRTAALLHSVSLPSPRLSGQKDLKKTVSHLPC--AAAPPSSDRLKPAPKPST 180
+ PAKRTAALLHS+SLPS RL+ QKD KKTVSHL P SS+R KPA KP
Sbjct: 121 ----LTPAKRTAALLHSISLPSRRLNRQKDFKKTVSHLSAVKTPTPTSSERRKPADKPPM 180
Query: 181 NSPATKFDPVIVIVALAMVVLWGRLCAILCTSALFYFGRRRRSEVERDGGG 230
NSPA D +IVIVA+A+VVLWG+LCAILCT+ALFYF RR RSE E +GGG
Sbjct: 181 NSPAKILDLIIVIVAVAIVVLWGQLCAILCTTALFYFCRRLRSETELEGGG 227
BLAST of Lcy02g003810 vs. ExPASy TrEMBL
Match:
A0A0A0LCZ2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G680630 PE=4 SV=1)
HSP 1 Score: 220.3 bits (560), Expect = 8.4e-54
Identity = 136/242 (56.20%), Postives = 163/242 (67.36%), Query Frame = 0
Query: 1 MAESSDKILPSKNRLHFLLRCFGSSPKVHSQKAPATGRRNRRVPSLRFRFNKSSATVPVD 60
MA+SS+ I PSK+ LHFL CF SS K+ ++KA + R RR S FRF KSSATVPVD
Sbjct: 1 MADSSENIPPSKSPLHFLFSCFRSSSKLPTKKASSIAPRIRRTSSRTFRFKKSSATVPVD 60
Query: 61 AAVPEIAVLCDDDASFSPDFKKPPPPPPVTSRAPAVRAEIV--ESIKPSQTRKKTESTQS 120
A P D+ SF P+FKK PP + +AP V EIV S+KPSQTRKK STQS
Sbjct: 61 VADPS-----HDELSFLPEFKKSPPLSFIMPKAPQVGGEIVVDSSLKPSQTRKKPHSTQS 120
Query: 121 ESKAERIPPAKRTAALLHSVSLPSPRLSGQKDLKKTVS-HLPCAAA---PPSSDRLKPAP 180
+++ P ++TAALLHSVSLPS +L+ QK KK VS HLP A A P SD KP P
Sbjct: 121 NFTTKKLSPTRKTAALLHSVSLPSQQLTRQKYFKKPVSGHLPAAVATTSPAFSDGNKPTP 180
Query: 181 KPSTNSPATKFDPVIVIVALAMVVLWGRLCAILCTSALFYFGRRRRSEVERDGGGGGFGR 237
K T P FD VI++V +A+V+LWGRLCAILCT+ALFY GRR RSE+E DGGG G GR
Sbjct: 181 KLPTYYPVKNFDRVIMVVIVAIVMLWGRLCAILCTTALFYLGRRMRSEIEPDGGGSGRGR 237
BLAST of Lcy02g003810 vs. ExPASy TrEMBL
Match:
A0A5A7UA28 (60S ribosomal protein L44 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1856G00090 PE=4 SV=1)
HSP 1 Score: 218.4 bits (555), Expect = 3.2e-53
Identity = 137/244 (56.15%), Postives = 163/244 (66.80%), Query Frame = 0
Query: 1 MAESSDKILPSKNRLHFLLRCFGSSPKVHSQKAPATGRRNRRVPSLRFRFNKSSATVPVD 60
MA+SS K PSK+ FL CF SS K+ ++K + RNRR SL FRF KSSATVPVD
Sbjct: 1 MADSSQKNPPSKSPFRFLFTCFRSSSKLPAKKPSSIAPRNRRTFSLTFRFKKSSATVPVD 60
Query: 61 AAVPEIAVLCDDDASFSPDFKKPPPPPPVTSRAPAVRAEIV-----ESIKPSQTRKKTES 120
A P D+ SFSPDFKKPPP +T +AP V EIV ES+KPSQTRKK ES
Sbjct: 61 VAYPS-----HDELSFSPDFKKPPPLSLITPKAPQVVGEIVVDSGYESLKPSQTRKKPES 120
Query: 121 TQSESKAERIPPAKRTAALLHSVSLPSPRLSGQKDLKKTVS-HLPCAAA---PPSSDRLK 180
TQS +++ P ++ AA LHSVS PS L+ QKD K++VS HLP A A P SD K
Sbjct: 121 TQSNFTTKKLSPTRKIAASLHSVSPPSQLLTRQKDFKRSVSEHLPAAVATTSPAFSDGNK 180
Query: 181 PAPKPSTNSPATKFDPVIVIVALAMVVLWGRLCAILCTSALFYFGRRRRSEVERDGGG-- 234
P PK +TN P D VI++V +A++VLWGRLCAILCT+ALFY GRR RSE+E GGG
Sbjct: 181 PTPKLATNYPVKNLDRVIMVVMVAIMVLWGRLCAILCTTALFYLGRRMRSEMEVGGGGGR 239
BLAST of Lcy02g003810 vs. ExPASy TrEMBL
Match:
A0A6J1F3C2 (uncharacterized protein LOC111441760 OS=Cucurbita moschata OX=3662 GN=LOC111441760 PE=4 SV=1)
HSP 1 Score: 206.1 bits (523), Expect = 1.6e-49
Identity = 138/249 (55.42%), Postives = 158/249 (63.45%), Query Frame = 0
Query: 1 MAESSDKILPSKNRLHFLLRCFGSSPKVHSQKAPATGRRNRRVPSLRFRFNKSSATVPVD 60
MAESSD K RLHFL RCF SSP V QKA NRR PSLRFRF KSSATVP+D
Sbjct: 1 MAESSD-----KPRLHFLFRCFRSSPNVQRQKAHPIASPNRRTPSLRFRFKKSSATVPLD 60
Query: 61 AAVPEIAVLCDDDASFSPDFKKPPPPPPVTSRAPAVRAEIV-----ESIKPSQTRKKTES 120
AAVP C D+ S SP+F PPPP P ++ EI+ ++IKPS+TRKK+ES
Sbjct: 61 AAVP-----CHDELSLSPEFNTPPPP-------PLIKGEIIVDSGCKTIKPSKTRKKSES 120
Query: 121 TQSESKAERIPPAKRTAALLHSVSLPSPRLSGQKDLKKTVSHLPCAAAP-----PSSDRL 180
TQS K+E T + + SP L +K LKK++SHLP AAA PSSDR
Sbjct: 121 TQSNPKSE------STQSNSTAEKKTSPSLHSEKGLKKSISHLPTAAAALTTSLPSSDRW 180
Query: 181 KPAPKPSTNSPATKFDPVIVIVALAMVVLWGRLCAILCTSALFYFGRRRRSEVERD---G 237
KP TNSP KFD VIVIVA+A+VVLWGRLCAILCT+ALFY R RS+ E D
Sbjct: 181 ----KPPTNSPNKKFDLVIVIVAVAIVVLWGRLCAILCTAALFYLRRCLRSKAELDVVIH 222
BLAST of Lcy02g003810 vs. ExPASy TrEMBL
Match:
A0A6J1IZW6 (uncharacterized protein LOC111481455 OS=Cucurbita maxima OX=3661 GN=LOC111481455 PE=4 SV=1)
HSP 1 Score: 204.1 bits (518), Expect = 6.3e-49
Identity = 131/242 (54.13%), Postives = 155/242 (64.05%), Query Frame = 0
Query: 1 MAESSDKILPSKNRLHFLLRCFGSSPKVHSQKAPATGRRNRRVPSLRFRFNKSSATVPVD 60
MAESSD K RLHFL RCF SSP V QKA NRR PSLRFRF K SATVP+D
Sbjct: 1 MAESSD-----KPRLHFLFRCFRSSPNVQRQKAQQIASPNRRTPSLRFRFKKCSATVPLD 60
Query: 61 AAVPEIAVLCDDDASFSPDFKKPPPPPPVTSRAPAVRAEIVESIKPSQTRKKTESTQSES 120
AAVP C D+ SFSP+F PPPP P+ + + ++IK S+TRKK+ESTQS
Sbjct: 61 AAVP-----CHDELSFSPEFNTPPPPSPI--KGEIIVDSGCKTIKQSKTRKKSESTQSNP 120
Query: 121 KAERIPPAKRTAALLHSVSLPSPRLSGQKDLKKTVSHLPCAAA---PPSSDRLKPAPKPS 180
E++PPAK+T+ LHS +K LKK++SHLP A A P +S + K
Sbjct: 121 TVEKLPPAKKTSPSLHS----------EKGLKKSISHLPIAVADADPTTSLASSDSWKAP 180
Query: 181 TNSPATKFDPVIVIVALAMVVLWGRLCAILCTSALFYFGRRRRSEVERD---GGGGGFGR 237
TNSP KFD V VIVA+A+VVLWGRLCAILCT+ALFY R RS+ E D GGG FG+
Sbjct: 181 TNSPTIKFDLVTVIVAVAIVVLWGRLCAILCTAALFYLRRCLRSKAELDVVVDGGGAFGK 220
BLAST of Lcy02g003810 vs. NCBI nr
Match:
XP_022949237.1 (uncharacterized protein LOC111452650 [Cucurbita moschata])
HSP 1 Score: 286.2 bits (731), Expect = 2.6e-73
Identity = 158/231 (68.40%), Postives = 181/231 (78.35%), Query Frame = 0
Query: 1 MAESSDKILPSKNRLHFLLRCFGSSPKVHSQKAPATGRRNRRVPSLRFRFNKSSATVPVD 60
MAE+S+K+ PSK LHFLLRCFGSSPKV ++K P TGRR+ R+PS RFRF KSSATVP+D
Sbjct: 1 MAEASEKMSPSKRPLHFLLRCFGSSPKVQTKKNPTTGRRDSRIPSPRFRFKKSSATVPID 60
Query: 61 AAVPEIAVLCDDDASFSPDFKKPPPPPPVTSRAPAVRAEIVESIKPSQTRKKTESTQSES 120
AVPEI V CDD ASFSP+FKKPPP P + SRAP VR +IVE IKPSQ KKTEST+S+
Sbjct: 61 VAVPEITVPCDDKASFSPEFKKPPPSPLIKSRAPTVRTKIVELIKPSQPWKKTESTRSDF 120
Query: 121 KAERIPPAKRTAALLHSVSLPSPRLSGQKDLKKTVSHLPC--AAAPPSSDRLKPAPKPST 180
+ PAKRTAALLHS+SLPS RL+ QKD KKTVSHL P SS+R KPA KP
Sbjct: 121 ----LTPAKRTAALLHSISLPSRRLNRQKDFKKTVSHLSAVKTPTPTSSERRKPADKPPM 180
Query: 181 NSPATKFDPVIVIVALAMVVLWGRLCAILCTSALFYFGRRRRSEVERDGGG 230
NSPA D +IVIVA+A+VVLWG+LCAILCT+ALFYF RR RSE E +GGG
Sbjct: 181 NSPAKILDLIIVIVAVAIVVLWGQLCAILCTTALFYFCRRLRSETELEGGG 227
BLAST of Lcy02g003810 vs. NCBI nr
Match:
KAG6606901.1 (60S ribosomal protein L44, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 284.3 bits (726), Expect = 9.8e-73
Identity = 162/246 (65.85%), Postives = 186/246 (75.61%), Query Frame = 0
Query: 1 MAESSDKILPSKNRLHFLLRCFGSSPKVHSQKAPATGRRNRRVPSLRFRFNKSSATVPVD 60
MAE+S+K+ PSK LHFLLRCFGSSPKV ++K P TGR + R+PS RFRF KSSATVP+D
Sbjct: 1 MAEASEKMSPSKRPLHFLLRCFGSSPKVQTKKNPTTGRWDSRIPSPRFRFKKSSATVPID 60
Query: 61 AAVPEIAVLCDDDASFSPDFKKPPPPPPVTSRAPAVRAEIVESIKPSQTRKKTESTQSES 120
AVPEI V CDD ASFSP+FKKPPP P + SRAP VR +IVE IKPSQT KKTEST+ +S
Sbjct: 61 VAVPEITVPCDDKASFSPEFKKPPPSPLIKSRAPTVRTKIVELIKPSQTWKKTESTRYDS 120
Query: 121 KAERIPPAKRTAALLHSVSLPSPRLSGQKDLKKTVSHLPC--AAAPPSSDRLKPAPKPST 180
+ PAKRTAALLHS+SLPS RL+ QKDLKKTVSHL P SS+R KPA K
Sbjct: 121 ----LTPAKRTAALLHSISLPSRRLNRQKDLKKTVSHLSAVKTPTPTSSERRKPADKAPM 180
Query: 181 NSPATKFDPVIVIVALAMVVLWGRLCAILCTSALFYFGRRRRSEVERDGG---------G 236
NSPA D +IVIVA+A+VVLWG+LCAILCT+ALFYF RR RSE E +GG G
Sbjct: 181 NSPAKILDLIIVIVAVAIVVLWGQLCAILCTTALFYFCRRLRSETESEGGGEMRVLNRKG 240
BLAST of Lcy02g003810 vs. NCBI nr
Match:
KGN58547.1 (hypothetical protein Csa_002056 [Cucumis sativus])
HSP 1 Score: 220.3 bits (560), Expect = 1.7e-53
Identity = 136/242 (56.20%), Postives = 163/242 (67.36%), Query Frame = 0
Query: 1 MAESSDKILPSKNRLHFLLRCFGSSPKVHSQKAPATGRRNRRVPSLRFRFNKSSATVPVD 60
MA+SS+ I PSK+ LHFL CF SS K+ ++KA + R RR S FRF KSSATVPVD
Sbjct: 1 MADSSENIPPSKSPLHFLFSCFRSSSKLPTKKASSIAPRIRRTSSRTFRFKKSSATVPVD 60
Query: 61 AAVPEIAVLCDDDASFSPDFKKPPPPPPVTSRAPAVRAEIV--ESIKPSQTRKKTESTQS 120
A P D+ SF P+FKK PP + +AP V EIV S+KPSQTRKK STQS
Sbjct: 61 VADPS-----HDELSFLPEFKKSPPLSFIMPKAPQVGGEIVVDSSLKPSQTRKKPHSTQS 120
Query: 121 ESKAERIPPAKRTAALLHSVSLPSPRLSGQKDLKKTVS-HLPCAAA---PPSSDRLKPAP 180
+++ P ++TAALLHSVSLPS +L+ QK KK VS HLP A A P SD KP P
Sbjct: 121 NFTTKKLSPTRKTAALLHSVSLPSQQLTRQKYFKKPVSGHLPAAVATTSPAFSDGNKPTP 180
Query: 181 KPSTNSPATKFDPVIVIVALAMVVLWGRLCAILCTSALFYFGRRRRSEVERDGGGGGFGR 237
K T P FD VI++V +A+V+LWGRLCAILCT+ALFY GRR RSE+E DGGG G GR
Sbjct: 181 KLPTYYPVKNFDRVIMVVIVAIVMLWGRLCAILCTTALFYLGRRMRSEIEPDGGGSGRGR 237
BLAST of Lcy02g003810 vs. NCBI nr
Match:
KAA0052773.1 (60S ribosomal protein L44 [Cucumis melo var. makuwa] >TYK04183.1 60S ribosomal protein L44 [Cucumis melo var. makuwa])
HSP 1 Score: 218.4 bits (555), Expect = 6.6e-53
Identity = 137/244 (56.15%), Postives = 163/244 (66.80%), Query Frame = 0
Query: 1 MAESSDKILPSKNRLHFLLRCFGSSPKVHSQKAPATGRRNRRVPSLRFRFNKSSATVPVD 60
MA+SS K PSK+ FL CF SS K+ ++K + RNRR SL FRF KSSATVPVD
Sbjct: 1 MADSSQKNPPSKSPFRFLFTCFRSSSKLPAKKPSSIAPRNRRTFSLTFRFKKSSATVPVD 60
Query: 61 AAVPEIAVLCDDDASFSPDFKKPPPPPPVTSRAPAVRAEIV-----ESIKPSQTRKKTES 120
A P D+ SFSPDFKKPPP +T +AP V EIV ES+KPSQTRKK ES
Sbjct: 61 VAYPS-----HDELSFSPDFKKPPPLSLITPKAPQVVGEIVVDSGYESLKPSQTRKKPES 120
Query: 121 TQSESKAERIPPAKRTAALLHSVSLPSPRLSGQKDLKKTVS-HLPCAAA---PPSSDRLK 180
TQS +++ P ++ AA LHSVS PS L+ QKD K++VS HLP A A P SD K
Sbjct: 121 TQSNFTTKKLSPTRKIAASLHSVSPPSQLLTRQKDFKRSVSEHLPAAVATTSPAFSDGNK 180
Query: 181 PAPKPSTNSPATKFDPVIVIVALAMVVLWGRLCAILCTSALFYFGRRRRSEVERDGGG-- 234
P PK +TN P D VI++V +A++VLWGRLCAILCT+ALFY GRR RSE+E GGG
Sbjct: 181 PTPKLATNYPVKNLDRVIMVVMVAIMVLWGRLCAILCTTALFYLGRRMRSEMEVGGGGGR 239
BLAST of Lcy02g003810 vs. NCBI nr
Match:
XP_022934627.1 (uncharacterized protein LOC111441760 [Cucurbita moschata] >XP_022934628.1 uncharacterized protein LOC111441760 [Cucurbita moschata] >XP_022934629.1 uncharacterized protein LOC111441760 [Cucurbita moschata])
HSP 1 Score: 206.1 bits (523), Expect = 3.4e-49
Identity = 138/249 (55.42%), Postives = 158/249 (63.45%), Query Frame = 0
Query: 1 MAESSDKILPSKNRLHFLLRCFGSSPKVHSQKAPATGRRNRRVPSLRFRFNKSSATVPVD 60
MAESSD K RLHFL RCF SSP V QKA NRR PSLRFRF KSSATVP+D
Sbjct: 1 MAESSD-----KPRLHFLFRCFRSSPNVQRQKAHPIASPNRRTPSLRFRFKKSSATVPLD 60
Query: 61 AAVPEIAVLCDDDASFSPDFKKPPPPPPVTSRAPAVRAEIV-----ESIKPSQTRKKTES 120
AAVP C D+ S SP+F PPPP P ++ EI+ ++IKPS+TRKK+ES
Sbjct: 61 AAVP-----CHDELSLSPEFNTPPPP-------PLIKGEIIVDSGCKTIKPSKTRKKSES 120
Query: 121 TQSESKAERIPPAKRTAALLHSVSLPSPRLSGQKDLKKTVSHLPCAAAP-----PSSDRL 180
TQS K+E T + + SP L +K LKK++SHLP AAA PSSDR
Sbjct: 121 TQSNPKSE------STQSNSTAEKKTSPSLHSEKGLKKSISHLPTAAAALTTSLPSSDRW 180
Query: 181 KPAPKPSTNSPATKFDPVIVIVALAMVVLWGRLCAILCTSALFYFGRRRRSEVERD---G 237
KP TNSP KFD VIVIVA+A+VVLWGRLCAILCT+ALFY R RS+ E D
Sbjct: 181 ----KPPTNSPNKKFDLVIVIVAVAIVVLWGRLCAILCTAALFYLRRCLRSKAELDVVIH 222
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A6J1GBH7 | 1.3e-73 | 68.40 | uncharacterized protein LOC111452650 OS=Cucurbita moschata OX=3662 GN=LOC1114526... | [more] |
| A0A0A0LCZ2 | 8.4e-54 | 56.20 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G680630 PE=4 SV=1 | [more] |
| A0A5A7UA28 | 3.2e-53 | 56.15 | 60S ribosomal protein L44 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo... | [more] |
| A0A6J1F3C2 | 1.6e-49 | 55.42 | uncharacterized protein LOC111441760 OS=Cucurbita moschata OX=3662 GN=LOC1114417... | [more] |
| A0A6J1IZW6 | 6.3e-49 | 54.13 | uncharacterized protein LOC111481455 OS=Cucurbita maxima OX=3661 GN=LOC111481455... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| XP_022949237.1 | 2.6e-73 | 68.40 | uncharacterized protein LOC111452650 [Cucurbita moschata] | [more] |
| KAG6606901.1 | 9.8e-73 | 65.85 | 60S ribosomal protein L44, partial [Cucurbita argyrosperma subsp. sororia] | [more] |
| KGN58547.1 | 1.7e-53 | 56.20 | hypothetical protein Csa_002056 [Cucumis sativus] | [more] |
| KAA0052773.1 | 6.6e-53 | 56.15 | 60S ribosomal protein L44 [Cucumis melo var. makuwa] >TYK04183.1 60S ribosomal p... | [more] |
| XP_022934627.1 | 3.4e-49 | 55.42 | uncharacterized protein LOC111441760 [Cucurbita moschata] >XP_022934628.1 unchar... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
