Lcy02g003190 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTCAAATCTAAATGGAAGCCTGCTCGCAGAGCATGGAAAATCTTACGCCAATGGAAAATTCAGGTCTATCGCCATCGCCGCTACTGCCCCTTCCTGTTTGATCTCCGCCACGTCCGGCGGTTCATCAAGCAACTCGTTCATCCAATTTCAACCCCAACTCCTCTCCCCCCACATTATGGGGAGCGTCAATTCTCTTTCGACGAGACCCCCATTTTCCACCTCAAATTGCATCGTCGTTCGTCGTCGTATACGACAACGTCTGCAACGACGACGACATGGTTCCACCTCCCACGGTTCTCATGCACGAACCAGAAGATTGAGTTTGATTATGAGTTTGAGAGTTGTGTTGTTGATGACGATGGTGAATGGGATCACCAACGATTGTGTGGTTGTGGTGGCTGCATGGACGGAGGAGTGTGTAACTATGAAGAGGAAGAAAATGAAGATGGGATTGATTTGAAGGCAGAGAAGTTTATAAAAATGTTCTATGAAGAAATGAAAATGCAAAATTTGACATCTTAA ATGTTCAAATCTAAATGGAAGCCTGCTCGCAGAGCATGGAAAATCTTACGCCAATGGAAAATTCAGGTCTATCGCCATCGCCGCTACTGCCCCTTCCTGTTTGATCTCCGCCACGTCCGGCGGTTCATCAAGCAACTCGTTCATCCAATTTCAACCCCAACTCCTCTCCCCCCACATTATGGGGAGCGTCAATTCTCTTTCGACGAGACCCCCATTTTCCACCTCAAATTGCATCGTCGTTCGTCGTCGTATACGACAACGTCTGCAACGACGACGACATGGTTCCACCTCCCACGGTTCTCATGCACGAACCAGAAGATTGAGTTTGATTATGAGTTTGAGAGTTGTGTTGTTGATGACGATGGTGAATGGGATCACCAACGATTGTGTGGTTGTGGTGGCTGCATGGACGGAGGAGTGTGTAACTATGAAGAGGAAGAAAATGAAGATGGGATTGATTTGAAGGCAGAGAAGTTTATAAAAATGTTCTATGAAGAAATGAAAATGCAAAATTTGACATCTTAA ATGTTCAAATCTAAATGGAAGCCTGCTCGCAGAGCATGGAAAATCTTACGCCAATGGAAAATTCAGGTCTATCGCCATCGCCGCTACTGCCCCTTCCTGTTTGATCTCCGCCACGTCCGGCGGTTCATCAAGCAACTCGTTCATCCAATTTCAACCCCAACTCCTCTCCCCCCACATTATGGGGAGCGTCAATTCTCTTTCGACGAGACCCCCATTTTCCACCTCAAATTGCATCGTCGTTCGTCGTCGTATACGACAACGTCTGCAACGACGACGACATGGTTCCACCTCCCACGGTTCTCATGCACGAACCAGAAGATTGAGTTTGATTATGAGTTTGAGAGTTGTGTTGTTGATGACGATGGTGAATGGGATCACCAACGATTGTGTGGTTGTGGTGGCTGCATGGACGGAGGAGTGTGTAACTATGAAGAGGAAGAAAATGAAGATGGGATTGATTTGAAGGCAGAGAAGTTTATAAAAATGTTCTATGAAGAAATGAAAATGCAAAATTTGACATCTTAA MFKSKWKPARRAWKILRQWKIQVYRHRRYCPFLFDLRHVRRFIKQLVHPISTPTPLPPHYGERQFSFDETPIFHLKLHRRSSSYTTTSATTTTWFHLPRFSCTNQKIEFDYEFESCVVDDDGEWDHQRLCGCGGCMDGGVCNYEEEENEDGIDLKAEKFIKMFYEEMKMQNLTS Homology
BLAST of Lcy02g003190 vs. ExPASy TrEMBL
Match: A0A0A0KYA9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G002580 PE=4 SV=1) HSP 1 Score: 147.9 bits (372), Expect = 3.9e-32 Identity = 88/166 (53.01%), Postives = 108/166 (65.06%), Query Frame = 0
BLAST of Lcy02g003190 vs. ExPASy TrEMBL
Match: A0A5D3E0E5 (Neuronal acetylcholine receptor subunit alpha-2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G001360 PE=4 SV=1) HSP 1 Score: 132.1 bits (331), Expect = 2.2e-27 Identity = 79/171 (46.20%), Postives = 102/171 (59.65%), Query Frame = 0
BLAST of Lcy02g003190 vs. ExPASy TrEMBL
Match: A0A1S3BZI3 (neuronal acetylcholine receptor subunit alpha-2-like OS=Cucumis melo OX=3656 GN=LOC103494743 PE=4 SV=1) HSP 1 Score: 132.1 bits (331), Expect = 2.2e-27 Identity = 79/171 (46.20%), Postives = 102/171 (59.65%), Query Frame = 0
BLAST of Lcy02g003190 vs. ExPASy TrEMBL
Match: A0A6J1F231 (uncharacterized protein LOC111441455 OS=Cucurbita moschata OX=3662 GN=LOC111441455 PE=4 SV=1) HSP 1 Score: 111.3 bits (277), Expect = 4.1e-21 Identity = 77/172 (44.77%), Postives = 88/172 (51.16%), Query Frame = 0
BLAST of Lcy02g003190 vs. ExPASy TrEMBL
Match: A0A1S3BRZ9 (uncharacterized protein LOC103492886 OS=Cucumis melo OX=3656 GN=LOC103492886 PE=4 SV=1) HSP 1 Score: 107.5 bits (267), Expect = 5.9e-20 Identity = 75/175 (42.86%), Postives = 97/175 (55.43%), Query Frame = 0
BLAST of Lcy02g003190 vs. NCBI nr
Match: XP_038906165.1 (uncharacterized protein LOC120092045 [Benincasa hispida]) HSP 1 Score: 184.9 bits (468), Expect = 6.0e-43 Identity = 110/183 (60.11%), Postives = 121/183 (66.12%), Query Frame = 0
BLAST of Lcy02g003190 vs. NCBI nr
Match: XP_011652950.1 (uncharacterized protein LOC105435158 [Cucumis sativus] >KGN52841.1 hypothetical protein Csa_014810 [Cucumis sativus]) HSP 1 Score: 147.9 bits (372), Expect = 8.1e-32 Identity = 88/166 (53.01%), Postives = 108/166 (65.06%), Query Frame = 0
BLAST of Lcy02g003190 vs. NCBI nr
Match: XP_008454304.1 (PREDICTED: neuronal acetylcholine receptor subunit alpha-2-like [Cucumis melo] >KAA0044406.1 neuronal acetylcholine receptor subunit alpha-2-like [Cucumis melo var. makuwa] >TYK29533.1 neuronal acetylcholine receptor subunit alpha-2-like [Cucumis melo var. makuwa]) HSP 1 Score: 132.1 bits (331), Expect = 4.6e-27 Identity = 79/171 (46.20%), Postives = 102/171 (59.65%), Query Frame = 0
BLAST of Lcy02g003190 vs. NCBI nr
Match: KAG6581289.1 (hypothetical protein SDJN03_21291, partial [Cucurbita argyrosperma subsp. sororia] >KAG7018012.1 hypothetical protein SDJN02_19878, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 112.1 bits (279), Expect = 4.9e-21 Identity = 75/171 (43.86%), Postives = 87/171 (50.88%), Query Frame = 0
BLAST of Lcy02g003190 vs. NCBI nr
Match: XP_022934217.1 (uncharacterized protein LOC111441455 [Cucurbita moschata]) HSP 1 Score: 111.3 bits (277), Expect = 8.4e-21 Identity = 77/172 (44.77%), Postives = 88/172 (51.16%), Query Frame = 0
BLAST of Lcy02g003190 vs. TAIR 10
Match: AT5G38700.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: LP.04 four leaves visible, LP.10 ten leaves visible, petal differentiation and expansion stage, LP.08 eight leaves visible, LP.12 twelve leaves visible; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02170.1); Has 64 Blast hits to 64 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 76.6 bits (187), Expect = 2.1e-14 Identity = 64/182 (35.16%), Postives = 93/182 (51.10%), Query Frame = 0
BLAST of Lcy02g003190 vs. TAIR 10
Match: AT4G02170.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G38700.1); Has 53 Blast hits to 53 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 53; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 59.7 bits (143), Expect = 2.7e-09 Identity = 51/147 (34.69%), Postives = 75/147 (51.02%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
Relationships
The following mRNA feature(s) are a part of this gene:
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