Lcy02g002270 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy02g002270
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	ATP-dependent Clp protease proteolytic subunit
Location	Chr02: 3137518 .. 3140035 (-)
RNA-Seq Expression	Lcy02g002270
Synteny	Lcy02g002270

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACGGCAGATTTCATCATAAGCCAGCTACTCTTTCTTGATGCTGAAGACCCAACAAAGGATATCAAATTGTTTATCAACTCACCTGGTGGCTCTGTCACTGCTGGTACTTTCAGCATCATTTTATTTTCATCATGAAATCCTTGATTAATTTTTTGCAGTGCAGACTGATAAACTATGGTTCTAATCTGAAGTTTTTGGATTGGAAGAAGGATGCTCTCGTAAAATCTTTATGGTTCATACCTGCTTCCCACATAATTCCTCCCCTTCATTATTTTGTTTTGGCCTCAAGTGAGCTTCTTATTGCTCCAAAGTTCTCGTATGTAGAGTGTTAAGTATATTGCAAAATCCCCCTCTTTTTGTACTTCAAAATGAAATCATAATGCCTGCTGTGTTAACCAAATGCCAGATAATGGAACAAAAATGCCAGATAATAAAATATTTTTGTTAATTCATGTATTATAATTTTGGAACAGCTTGATATCCATAATTTACAAAAAATACTCTTAATTGTCTTCCATGTTCAGTTAGTGAGTTATTACTTGTTTAGCACCATACTCGTAACTTTCACCATCAACCAAATGAAAGCTTTAGTATGTGGTATGGCAATTATGGGGCAAGAGGTTGGAGGATATGCATATAACCTGATTCAAGTTCATTTCACATAATGATCTATAAAAGATTTTCTGATTAGGAGGGTTGCATAAACAGATCCTCGGTATGGGTTGATTTGTTTTTTTCCTTCAACTGTCTAGATAATTATTTTAGGAAAATACTTTACTGCATACCGGTATGTAGGGATCTCCCTGCATACCAGTATGTAGGGATCTCCCTACATACCACCATTAAAATGTTGACAACTAGGAAAAATAAAAAAGTTTTCTCATTTTTTTCCTTTCTCTTTTTTAGTTGTCAAGATTTTAATGGAGATCCCTAAATACCGGTATGTAGCCAAGTATTGTTCACTATTTTACAAGTTTTTTTGTAACACCCACTCCATCTAGACAGTCCAATTACCTCTTCCATTGTTTCTCCTCACTAAATAGCCCTTCTTATGTTCGTTTATTTTTTGTTTCTTGATCTCTTCCTCCTTCAATCATTTATAGGCCTTTTCAAATAGAGCTTTGGGATTCCAGTTTTTCTTTTGGTCTACCTCTAAAGCTGCAGGTTGTTATTAGTCATGTTTTTTTCTCAACATTTTTTGGCTGCATGTAGGAATGGGAATATATGATGCAATGAAGTTGTGCAAGGCCGATGTTTCAACAGTTTGTCTGGGACTCGCTGCATCTATGGGAGCGTTTCTTCTAGCTTCTGGTTCAAAGGGAAAGCGATTCTGCATGCCCAATGGAAGAGTGATGATCCATCAACCTCTTGGAACAGCTGGAGGTAAAGTGAGTAAACAATCATTTTCTGTGCCTTGATGTCAAGTCAACTTTATGGCATTTTGTCCACTGTGATTGTAATTTTTGTTTCACATTCATATTTTTGCTTTTTAGTCCTCGTTGATTCATGAATGCGTGAAACATTTATATAATTCTTCATTCATTTTGTTAAGTGGTTTCATGGGAACATAGAGATGTCTACGTCCCCCGGCCCTTAGGTTGTTTTGCTCATTTTTTGAATGCAGCCATGTTTTGTTTGTTATCCAAAAAAAAAAAAAAAGAAAGTGGTTTCATGGGAACATAGAGATGTCTACGTATATATATTTGAAATAGTTGTTGAAATTGTATGATAGGGAGATCAAAATCAATAACCCTCTGACATTACCAACATTATCTTCCAATTAAGTAATCCTTGAGTAATGCATAATCTAGTGGTTATGAACTTGAGTTATTTGTATGTTAACTTGTTTATAAGGACACAACCGGCATCCCCTAGCGCTCCACCTAGATCGAGCAGCTTTGGTGCTACAAAATATAAGGGCATGGAATCAAATGCAGGAATTTTCCCCAAAATTTGTACCTATTGATATTGCCTGTTTGTCTATATAATAAGTAGATTAGAGCTTCCACTTATGGTTTTTCTCACTGGTTACCGTGTCCATTCCAGGCAACGGAGATGAGCATACGAATACGAGAAATGGCGTATCACAAAATTAAGTTAAACAAAATTTTTTCTAGAATCACAGGAAAGCCATTAGAGCAGGTTTGCCTCTACATTGTTGCTTTGACTACCTGGTTTCAGTTTCTTTCTCAAACCCATGATATTTATTTGTCATTTGCAGATTGAATTGGACACGGATCGTGATAATTTTATGAATCCTTGGGAAGCTAAAGAATATGGTTTGATTGATGAAGTTATTGATGATGGGAAGCCAGGACTCATTGCTCCAATTGCAGAAGCAACTCCTCCACCGAAAACCCGAGTCTGGGATCTATGGAAGGTTGAAGGGAGTCGGAAAGCTAAGAAGAATTTGCCTTCAGAAAACAAGATTTTACAGAATGGATATCAAGGGGGTCAAGGAACCGATGAGGAGCGCGGTACCGAGCAAGAAACAGAGGAACCGAGTCCTGTATGA

mRNA sequence

ATGACGGCAGATTTCATCATAAGCCAGCTACTCTTTCTTGATGCTGAAGACCCAACAAAGGATATCAAATTGTTTATCAACTCACCTGGTGGCTCTGTCACTGCTGGAATGGGAATATATGATGCAATGAAGTTGTGCAAGGCCGATGTTTCAACAGTTTGTCTGGGACTCGCTGCATCTATGGGAGCGTTTCTTCTAGCTTCTGGTTCAAAGGGAAAGCGATTCTGCATGCCCAATGGAAGAGTGATGATCCATCAACCTCTTGGAACAGCTGGAGGTAAAGCAACGGAGATGAGCATACGAATACGAGAAATGGCGTATCACAAAATTAAGTTAAACAAAATTTTTTCTAGAATCACAGGAAAGCCATTAGAGCAGATTGAATTGGACACGGATCGTGATAATTTTATGAATCCTTGGGAAGCTAAAGAATATGGTTTGATTGATGAAGTTATTGATGATGGGAAGCCAGGACTCATTGCTCCAATTGCAGAAGCAACTCCTCCACCGAAAACCCGAGTCTGGGATCTATGGAAGGTTGAAGGGAGTCGGAAAGCTAAGAAGAATTTGCCTTCAGAAAACAAGATTTTACAGAATGGATATCAAGGGGGTCAAGGAACCGATGAGGAGCGCGGTACCGAGCAAGAAACAGAGGAACCGAGTCCTGTATGA

Coding sequence (CDS)

ATGACGGCAGATTTCATCATAAGCCAGCTACTCTTTCTTGATGCTGAAGACCCAACAAAGGATATCAAATTGTTTATCAACTCACCTGGTGGCTCTGTCACTGCTGGAATGGGAATATATGATGCAATGAAGTTGTGCAAGGCCGATGTTTCAACAGTTTGTCTGGGACTCGCTGCATCTATGGGAGCGTTTCTTCTAGCTTCTGGTTCAAAGGGAAAGCGATTCTGCATGCCCAATGGAAGAGTGATGATCCATCAACCTCTTGGAACAGCTGGAGGTAAAGCAACGGAGATGAGCATACGAATACGAGAAATGGCGTATCACAAAATTAAGTTAAACAAAATTTTTTCTAGAATCACAGGAAAGCCATTAGAGCAGATTGAATTGGACACGGATCGTGATAATTTTATGAATCCTTGGGAAGCTAAAGAATATGGTTTGATTGATGAAGTTATTGATGATGGGAAGCCAGGACTCATTGCTCCAATTGCAGAAGCAACTCCTCCACCGAAAACCCGAGTCTGGGATCTATGGAAGGTTGAAGGGAGTCGGAAAGCTAAGAAGAATTTGCCTTCAGAAAACAAGATTTTACAGAATGGATATCAAGGGGGTCAAGGAACCGATGAGGAGCGCGGTACCGAGCAAGAAACAGAGGAACCGAGTCCTGTATGA

Protein sequence

MTADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEATPPPKTRVWDLWKVEGSRKAKKNLPSENKILQNGYQGGQGTDEERGTEQETEEPSPV

Homology

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BLAST of Lcy02g002270 vs. ExPASy Swiss-Prot
Match: Q9SXJ6 (ATP-dependent Clp protease proteolytic subunit 3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CLPP3 PE=1 SV=1)

HSP 1 Score: 353.2 bits (905), Expect = 2.1e-96
Identity = 169/201 (84.08%), Postives = 181/201 (90.05%), Query Frame = 0


Query: 1   MTADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAAS 60
           MTAD +ISQLL LDAED  +DI LFINSPGGS+TAGMGIYDAMK CKADVSTVCLGLAAS
Sbjct: 105 MTADLVISQLLLLDAEDSERDITLFINSPGGSITAGMGIYDAMKQCKADVSTVCLGLAAS 164

Query: 61  MGAFLLASGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRIT 120
           MGAFLLASGSKGKR+CMPN +VMIHQPLGTAGGKATEMSIRIREM YHKIKLNKIFSRIT
Sbjct: 165 MGAFLLASGSKGKRYCMPNSKVMIHQPLGTAGGKATEMSIRIREMMYHKIKLNKIFSRIT 224

Query: 121 GKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEATPPPKTRVWDLWKV 180
           GKP  +IE DTDRDNF+NPWEAKEYGLID VIDDGKPGLIAPI + TPPPKT+VWDLWKV
Sbjct: 225 GKPESEIESDTDRDNFLNPWEAKEYGLIDAVIDDGKPGLIAPIGDGTPPPKTKVWDLWKV 284

Query: 181 EGSRKAKKNLPSENKILQNGY 202
           EG++K   NLPSE  + QNGY
Sbjct: 285 EGTKKDNTNLPSERSMTQNGY 305

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BLAST of Lcy02g002270 vs. ExPASy Swiss-Prot
Match: A7FYI2 (ATP-dependent Clp protease proteolytic subunit OS=Clostridium botulinum (strain ATCC 19397 / Type A) OX=441770 GN=clpP PE=3 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 9.4e-52
Identity = 100/155 (64.52%), Postives = 123/155 (79.35%), Query Frame = 0


Query: 2   TADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASM 61
           TA  I++QLLFL+AEDP KDI L+INSPGGS+T+GM IYD M+  K DVST+C+G+AASM
Sbjct: 40  TASLIVAQLLFLEAEDPDKDIHLYINSPGGSITSGMAIYDTMQYIKPDVSTICVGMAASM 99

Query: 62  GAFLLASGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITG 121
           GAFLLA+G+KGKR+ +PN  VMIHQPLG   G+AT++ I    +   K KLN I S  TG
Sbjct: 100 GAFLLAAGAKGKRYALPNSEVMIHQPLGGFRGQATDIGIHAERILKMKKKLNTILSDRTG 159

Query: 122 KPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGK 157
           KPLEQ+ELDT+RD+F++  EAKEYGLIDEVID  K
Sbjct: 160 KPLEQVELDTERDHFLSAEEAKEYGLIDEVIDKKK 194

[Close]

BLAST of Lcy02g002270 vs. ExPASy Swiss-Prot
Match: A5I6W1 (ATP-dependent Clp protease proteolytic subunit OS=Clostridium botulinum (strain Hall / ATCC 3502 / NCTC 13319 / Type A) OX=441771 GN=clpP PE=3 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 9.4e-52
Identity = 100/155 (64.52%), Postives = 123/155 (79.35%), Query Frame = 0


Query: 2   TADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASM 61
           TA  I++QLLFL+AEDP KDI L+INSPGGS+T+GM IYD M+  K DVST+C+G+AASM
Sbjct: 40  TASLIVAQLLFLEAEDPDKDIHLYINSPGGSITSGMAIYDTMQYIKPDVSTICVGMAASM 99

Query: 62  GAFLLASGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITG 121
           GAFLLA+G+KGKR+ +PN  VMIHQPLG   G+AT++ I    +   K KLN I S  TG
Sbjct: 100 GAFLLAAGAKGKRYALPNSEVMIHQPLGGFRGQATDIGIHAERILKMKKKLNTILSDRTG 159

Query: 122 KPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGK 157
           KPLEQ+ELDT+RD+F++  EAKEYGLIDEVID  K
Sbjct: 160 KPLEQVELDTERDHFLSAEEAKEYGLIDEVIDKKK 194

[Close]

BLAST of Lcy02g002270 vs. ExPASy Swiss-Prot
Match: C1FLA6 (ATP-dependent Clp protease proteolytic subunit OS=Clostridium botulinum (strain Kyoto / Type A2) OX=536232 GN=clpP PE=3 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 9.4e-52
Identity = 100/155 (64.52%), Postives = 123/155 (79.35%), Query Frame = 0


Query: 2   TADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASM 61
           TA  I++QLLFL+AEDP KDI L+INSPGGS+T+GM IYD M+  K DVST+C+G+AASM
Sbjct: 40  TASLIVAQLLFLEAEDPDKDIHLYINSPGGSITSGMAIYDTMQYIKPDVSTICVGMAASM 99

Query: 62  GAFLLASGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITG 121
           GAFLLA+G+KGKR+ +PN  VMIHQPLG   G+AT++ I    +   K KLN I S  TG
Sbjct: 100 GAFLLAAGAKGKRYALPNSEVMIHQPLGGFRGQATDIGIHAERILKMKKKLNTILSDRTG 159

Query: 122 KPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGK 157
           KPLEQ+ELDT+RD+F++  EAKEYGLIDEVID  K
Sbjct: 160 KPLEQVELDTERDHFLSAEEAKEYGLIDEVIDKKK 194

[Close]

BLAST of Lcy02g002270 vs. ExPASy Swiss-Prot
Match: B1IND7 (ATP-dependent Clp protease proteolytic subunit OS=Clostridium botulinum (strain Okra / Type B1) OX=498213 GN=clpP PE=3 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 9.4e-52
Identity = 100/155 (64.52%), Postives = 123/155 (79.35%), Query Frame = 0


Query: 2   TADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASM 61
           TA  I++QLLFL+AEDP KDI L+INSPGGS+T+GM IYD M+  K DVST+C+G+AASM
Sbjct: 40  TASLIVAQLLFLEAEDPDKDIHLYINSPGGSITSGMAIYDTMQYIKPDVSTICVGMAASM 99

Query: 62  GAFLLASGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITG 121
           GAFLLA+G+KGKR+ +PN  VMIHQPLG   G+AT++ I    +   K KLN I S  TG
Sbjct: 100 GAFLLAAGAKGKRYALPNSEVMIHQPLGGFRGQATDIGIHAERILKMKKKLNTILSDRTG 159

Query: 122 KPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGK 157
           KPLEQ+ELDT+RD+F++  EAKEYGLIDEVID  K
Sbjct: 160 KPLEQVELDTERDHFLSAEEAKEYGLIDEVIDKKK 194

[Close]

BLAST of Lcy02g002270 vs. ExPASy TrEMBL
Match: A0A5A7UZN2 (ATP-dependent Clp protease proteolytic subunit OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold451G00040 PE=3 SV=1)

HSP 1 Score: 439.5 bits (1129), Expect = 8.4e-120
Identity = 215/223 (96.41%), Postives = 223/223 (100.00%), Query Frame = 0


Query: 1   MTADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAAS 60
           +TADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVST+CLGLAAS
Sbjct: 153 VTADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAAS 212

Query: 61  MGAFLLASGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRIT 120
           MGAFLLASGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRIT
Sbjct: 213 MGAFLLASGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRIT 272

Query: 121 GKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEATPPPKTRVWDLWKV 180
           GKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEATPPPKTRVWDLWKV
Sbjct: 273 GKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEATPPPKTRVWDLWKV 332

Query: 181 EGSRKAKKNLPSENKILQNGYQGGQGTDEERGTEQETEEPSPV 224
           EGSRKAKKNLPSE+KIL+NGYQGG+G+DEERG++QETEEPSPV
Sbjct: 333 EGSRKAKKNLPSESKILKNGYQGGEGSDEERGSQQETEEPSPV 375

[Close]

BLAST of Lcy02g002270 vs. ExPASy TrEMBL
Match: A0A1S3C615 (ATP-dependent Clp protease proteolytic subunit OS=Cucumis melo OX=3656 GN=LOC103496858 PE=3 SV=1)

HSP 1 Score: 439.5 bits (1129), Expect = 8.4e-120
Identity = 215/223 (96.41%), Postives = 223/223 (100.00%), Query Frame = 0


Query: 1   MTADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAAS 60
           +TADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVST+CLGLAAS
Sbjct: 117 VTADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAAS 176

Query: 61  MGAFLLASGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRIT 120
           MGAFLLASGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRIT
Sbjct: 177 MGAFLLASGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRIT 236

Query: 121 GKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEATPPPKTRVWDLWKV 180
           GKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEATPPPKTRVWDLWKV
Sbjct: 237 GKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEATPPPKTRVWDLWKV 296

Query: 181 EGSRKAKKNLPSENKILQNGYQGGQGTDEERGTEQETEEPSPV 224
           EGSRKAKKNLPSE+KIL+NGYQGG+G+DEERG++QETEEPSPV
Sbjct: 297 EGSRKAKKNLPSESKILKNGYQGGEGSDEERGSQQETEEPSPV 339

[Close]

BLAST of Lcy02g002270 vs. ExPASy TrEMBL
Match: A0A6J1CQN6 (ATP-dependent Clp protease proteolytic subunit OS=Momordica charantia OX=3673 GN=LOC111013299 PE=3 SV=1)

HSP 1 Score: 434.9 bits (1117), Expect = 2.1e-118
Identity = 215/223 (96.41%), Postives = 219/223 (98.21%), Query Frame = 0


Query: 1   MTADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAAS 60
           MTADFIISQLLFLDAED TKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAAS
Sbjct: 114 MTADFIISQLLFLDAEDSTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAAS 173

Query: 61  MGAFLLASGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRIT 120
           MGAFLLA+GSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRIT
Sbjct: 174 MGAFLLAAGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRIT 233

Query: 121 GKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEATPPPKTRVWDLWKV 180
           GKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIA+A  PPKTRVWDLWKV
Sbjct: 234 GKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIADAAAPPKTRVWDLWKV 293

Query: 181 EGSRKAKKNLPSENKILQNGYQGGQGTDEERGTEQETEEPSPV 224
           EGSRKAKKNLPSE+KILQNGYQGGQG DEERGT+QETEEPSPV
Sbjct: 294 EGSRKAKKNLPSEDKILQNGYQGGQGNDEERGTQQETEEPSPV 336

[Close]

BLAST of Lcy02g002270 vs. ExPASy TrEMBL
Match: A0A0A0LA84 (ATP-dependent Clp protease proteolytic subunit OS=Cucumis sativus OX=3659 GN=Csa_3G363170 PE=3 SV=1)

HSP 1 Score: 431.4 bits (1108), Expect = 2.3e-117
Identity = 213/224 (95.09%), Postives = 222/224 (99.11%), Query Frame = 0


Query: 1   MTADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAAS 60
           MTADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAAS
Sbjct: 116 MTADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAAS 175

Query: 61  MGAFLLASGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRIT 120
           MGAFLLASGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRIT
Sbjct: 176 MGAFLLASGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRIT 235

Query: 121 GKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEATPPPKTRVWDLWKV 180
           GKP+EQIELDT+RDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEATPPPKTR+WDLWKV
Sbjct: 236 GKPIEQIELDTERDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEATPPPKTRIWDLWKV 295

Query: 181 EGSRKAKKNLPSENKILQNGY-QGGQGTDEERGTEQETEEPSPV 224
           EGSRKAKKNLPSE+KIL+NGY +GGQG+D+ERG +QETEEPSPV
Sbjct: 296 EGSRKAKKNLPSESKILKNGYEEGGQGSDKERGGQQETEEPSPV 339

[Close]

BLAST of Lcy02g002270 vs. ExPASy TrEMBL
Match: A0A6J1KEX5 (ATP-dependent Clp protease proteolytic subunit OS=Cucurbita maxima OX=3661 GN=LOC111492640 PE=3 SV=1)

HSP 1 Score: 414.5 bits (1064), Expect = 2.9e-112
Identity = 205/222 (92.34%), Postives = 212/222 (95.50%), Query Frame = 0


Query: 1   MTADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAAS 60
           MTADFIISQLLFLDAEDPTKDIKL INSPGGSVTAGMGIYDAMKLCKADVSTVC+GLAAS
Sbjct: 117 MTADFIISQLLFLDAEDPTKDIKLLINSPGGSVTAGMGIYDAMKLCKADVSTVCMGLAAS 176

Query: 61  MGAFLLASGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRIT 120
           MGAFLLASGSKGKRFCMPNGRVMIHQPLGTAGG+AT+MSIR+REMAYHKIKLNKI SRIT
Sbjct: 177 MGAFLLASGSKGKRFCMPNGRVMIHQPLGTAGGRATDMSIRLREMAYHKIKLNKILSRIT 236

Query: 121 GKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEATPPPKTRVWDLWKV 180
           GKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEA PPPKTRVWDLWK+
Sbjct: 237 GKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEANPPPKTRVWDLWKI 296

Query: 181 EGSRKAKKNLPSENKILQNGYQGGQGTDEERGTEQETEEPSP 223
           EGSRKAKKNLPSE KILQNGY   QG+DEER  + ETEEPSP
Sbjct: 297 EGSRKAKKNLPSETKILQNGY---QGSDEERSPQPETEEPSP 335

[Close]

BLAST of Lcy02g002270 vs. NCBI nr
Match: XP_008457103.1 (PREDICTED: ATP-dependent Clp protease proteolytic subunit 3, chloroplastic [Cucumis melo])

HSP 1 Score: 439.5 bits (1129), Expect = 1.7e-119
Identity = 215/223 (96.41%), Postives = 223/223 (100.00%), Query Frame = 0


Query: 1   MTADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAAS 60
           +TADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVST+CLGLAAS
Sbjct: 117 VTADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAAS 176

Query: 61  MGAFLLASGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRIT 120
           MGAFLLASGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRIT
Sbjct: 177 MGAFLLASGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRIT 236

Query: 121 GKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEATPPPKTRVWDLWKV 180
           GKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEATPPPKTRVWDLWKV
Sbjct: 237 GKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEATPPPKTRVWDLWKV 296

Query: 181 EGSRKAKKNLPSENKILQNGYQGGQGTDEERGTEQETEEPSPV 224
           EGSRKAKKNLPSE+KIL+NGYQGG+G+DEERG++QETEEPSPV
Sbjct: 297 EGSRKAKKNLPSESKILKNGYQGGEGSDEERGSQQETEEPSPV 339

[Close]

BLAST of Lcy02g002270 vs. NCBI nr
Match: KAA0060718.1 (ATP-dependent Clp protease proteolytic subunit 3 [Cucumis melo var. makuwa] >TYK01461.1 ATP-dependent Clp protease proteolytic subunit 3 [Cucumis melo var. makuwa])

HSP 1 Score: 439.5 bits (1129), Expect = 1.7e-119
Identity = 215/223 (96.41%), Postives = 223/223 (100.00%), Query Frame = 0


Query: 1   MTADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAAS 60
           +TADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVST+CLGLAAS
Sbjct: 153 VTADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAAS 212

Query: 61  MGAFLLASGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRIT 120
           MGAFLLASGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRIT
Sbjct: 213 MGAFLLASGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRIT 272

Query: 121 GKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEATPPPKTRVWDLWKV 180
           GKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEATPPPKTRVWDLWKV
Sbjct: 273 GKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEATPPPKTRVWDLWKV 332

Query: 181 EGSRKAKKNLPSENKILQNGYQGGQGTDEERGTEQETEEPSPV 224
           EGSRKAKKNLPSE+KIL+NGYQGG+G+DEERG++QETEEPSPV
Sbjct: 333 EGSRKAKKNLPSESKILKNGYQGGEGSDEERGSQQETEEPSPV 375

[Close]

BLAST of Lcy02g002270 vs. NCBI nr
Match: XP_022143418.1 (ATP-dependent Clp protease proteolytic subunit 3, chloroplastic [Momordica charantia])

HSP 1 Score: 434.9 bits (1117), Expect = 4.3e-118
Identity = 215/223 (96.41%), Postives = 219/223 (98.21%), Query Frame = 0


Query: 1   MTADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAAS 60
           MTADFIISQLLFLDAED TKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAAS
Sbjct: 114 MTADFIISQLLFLDAEDSTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAAS 173

Query: 61  MGAFLLASGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRIT 120
           MGAFLLA+GSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRIT
Sbjct: 174 MGAFLLAAGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRIT 233

Query: 121 GKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEATPPPKTRVWDLWKV 180
           GKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIA+A  PPKTRVWDLWKV
Sbjct: 234 GKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIADAAAPPKTRVWDLWKV 293

Query: 181 EGSRKAKKNLPSENKILQNGYQGGQGTDEERGTEQETEEPSPV 224
           EGSRKAKKNLPSE+KILQNGYQGGQG DEERGT+QETEEPSPV
Sbjct: 294 EGSRKAKKNLPSEDKILQNGYQGGQGNDEERGTQQETEEPSPV 336

[Close]

BLAST of Lcy02g002270 vs. NCBI nr
Match: XP_038902354.1 (ATP-dependent Clp protease proteolytic subunit 3, chloroplastic [Benincasa hispida])

HSP 1 Score: 433.3 bits (1113), Expect = 1.2e-117
Identity = 213/223 (95.52%), Postives = 218/223 (97.76%), Query Frame = 0


Query: 1   MTADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAAS 60
           MTADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVST+CLGLAAS
Sbjct: 114 MTADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAAS 173

Query: 61  MGAFLLASGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRIT 120
           MGAFLLASGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREM YHKIKLNKIFSRIT
Sbjct: 174 MGAFLLASGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREMTYHKIKLNKIFSRIT 233

Query: 121 GKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEATPPPKTRVWDLWKV 180
           GKPLEQIELDTDRDNFMNPWEAK+YGLIDEVIDDGKPGLIAP AEATPPPKTRVWDLWKV
Sbjct: 234 GKPLEQIELDTDRDNFMNPWEAKDYGLIDEVIDDGKPGLIAPTAEATPPPKTRVWDLWKV 293

Query: 181 EGSRKAKKNLPSENKILQNGYQGGQGTDEERGTEQETEEPSPV 224
           EGSRK KKNLPSENKILQNGYQ GQG+DEERG++QETEE SPV
Sbjct: 294 EGSRKTKKNLPSENKILQNGYQEGQGSDEERGSQQETEETSPV 336

[Close]

BLAST of Lcy02g002270 vs. NCBI nr
Match: XP_011651427.1 (ATP-dependent Clp protease proteolytic subunit 3, chloroplastic [Cucumis sativus] >KGN57884.1 hypothetical protein Csa_010181 [Cucumis sativus])

HSP 1 Score: 431.4 bits (1108), Expect = 4.7e-117
Identity = 213/224 (95.09%), Postives = 222/224 (99.11%), Query Frame = 0


Query: 1   MTADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAAS 60
           MTADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAAS
Sbjct: 116 MTADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAAS 175

Query: 61  MGAFLLASGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRIT 120
           MGAFLLASGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRIT
Sbjct: 176 MGAFLLASGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRIT 235

Query: 121 GKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEATPPPKTRVWDLWKV 180
           GKP+EQIELDT+RDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEATPPPKTR+WDLWKV
Sbjct: 236 GKPIEQIELDTERDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEATPPPKTRIWDLWKV 295

Query: 181 EGSRKAKKNLPSENKILQNGY-QGGQGTDEERGTEQETEEPSPV 224
           EGSRKAKKNLPSE+KIL+NGY +GGQG+D+ERG +QETEEPSPV
Sbjct: 296 EGSRKAKKNLPSESKILKNGYEEGGQGSDKERGGQQETEEPSPV 339

[Close]

BLAST of Lcy02g002270 vs. TAIR 10
Match: AT1G66670.1 (CLP protease proteolytic subunit 3 )

HSP 1 Score: 353.2 bits (905), Expect = 1.5e-97
Identity = 169/201 (84.08%), Postives = 181/201 (90.05%), Query Frame = 0


Query: 1   MTADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAAS 60
           MTAD +ISQLL LDAED  +DI LFINSPGGS+TAGMGIYDAMK CKADVSTVCLGLAAS
Sbjct: 105 MTADLVISQLLLLDAEDSERDITLFINSPGGSITAGMGIYDAMKQCKADVSTVCLGLAAS 164

Query: 61  MGAFLLASGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRIT 120
           MGAFLLASGSKGKR+CMPN +VMIHQPLGTAGGKATEMSIRIREM YHKIKLNKIFSRIT
Sbjct: 165 MGAFLLASGSKGKRYCMPNSKVMIHQPLGTAGGKATEMSIRIREMMYHKIKLNKIFSRIT 224

Query: 121 GKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEATPPPKTRVWDLWKV 180
           GKP  +IE DTDRDNF+NPWEAKEYGLID VIDDGKPGLIAPI + TPPPKT+VWDLWKV
Sbjct: 225 GKPESEIESDTDRDNFLNPWEAKEYGLIDAVIDDGKPGLIAPIGDGTPPPKTKVWDLWKV 284

Query: 181 EGSRKAKKNLPSENKILQNGY 202
           EG++K   NLPSE  + QNGY
Sbjct: 285 EGTKKDNTNLPSERSMTQNGY 305

[Close]

BLAST of Lcy02g002270 vs. TAIR 10
Match: AT1G02560.1 (nuclear encoded CLP protease 5 )

HSP 1 Score: 190.7 bits (483), Expect = 1.3e-48
Identity = 93/150 (62.00%), Postives = 118/150 (78.67%), Query Frame = 0


Query: 3   ADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMG 62
           A+ I++QLL+LDA DPTKDI +++NSPGGSVTAGM I+D M+  + DVSTVC+GLAASMG
Sbjct: 136 ANIIVAQLLYLDAVDPTKDIVMYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMG 195

Query: 63  AFLLASGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGK 122
           AFLL++G+KGKR+ +PN R+MIHQPLG A G  T++ I+  EM +HK  LN   +  TG+
Sbjct: 196 AFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLHHKANLNGYLAYHTGQ 255

Query: 123 PLEQIELDTDRDNFMNPWEAKEYGLIDEVI 153
            LE+I  DTDRD FM+  EAKEYGLID VI
Sbjct: 256 SLEKINQDTDRDFFMSAKEAKEYGLIDGVI 285

[Close]

BLAST of Lcy02g002270 vs. TAIR 10
Match: AT5G45390.1 (CLP protease P4 )

HSP 1 Score: 178.7 bits (452), Expect = 5.1e-45
Identity = 88/167 (52.69%), Postives = 119/167 (71.26%), Query Frame = 0


Query: 3   ADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMG 62
           AD I+SQLL LDA+DP KDIKLFINSPGGS++A M IYD ++L +ADVST+ LG+AAS  
Sbjct: 101 ADAIMSQLLLLDAKDPKKDIKLFINSPGGSLSATMAIYDVVQLVRADVSTIALGIAASTA 160

Query: 63  AFLLASGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGK 122
           + +L +G+KGKRF MPN R+MIHQPLG A G+A ++ I+ +E+ ++K  +  I +  T +
Sbjct: 161 SIILGAGTKGKRFAMPNTRIMIHQPLGGASGQAIDVEIQAKEVMHNKNNVTSIIAGCTSR 220

Query: 123 PLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEATPP 170
             EQ+  D DRD +M+P EA EYGLID VID      + P+ +   P
Sbjct: 221 SFEQVLKDIDRDRYMSPIEAVEYGLIDGVIDGDSIIPLEPVPDRVKP 267

[Close]

BLAST of Lcy02g002270 vs. TAIR 10
Match: AT5G23140.1 (nuclear-encoded CLP protease P7 )

HSP 1 Score: 158.3 bits (399), Expect = 7.2e-39
Identity = 72/153 (47.06%), Postives = 114/153 (74.51%), Query Frame = 0


Query: 2   TADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASM 61
           T+  +++QLL+L++E+P+K I +++NSPGG VTAG+ IYD M+  ++ +ST+CLG AASM
Sbjct: 69  TSHVVVAQLLYLESENPSKPIHMYLNSPGGHVTAGLAIYDTMQYIRSPISTICLGQAASM 128

Query: 62  GAFLLASGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITG 121
            + LLA+G+KG+R  +PN  VMIHQP G   G+A +++I  +++      LN+++ + TG
Sbjct: 129 ASLLLAAGAKGQRRSLPNATVMIHQPSGGYSGQAKDITIHTKQIVRVWDALNELYVKHTG 188

Query: 122 KPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDD 155
           +PL+ +  + DRD+FM P EAK +G+IDEVID+
Sbjct: 189 QPLDVVANNMDRDHFMTPEEAKAFGIIDEVIDE 221

[Close]

BLAST of Lcy02g002270 vs. TAIR 10
Match: AT1G11750.1 (CLP protease proteolytic subunit 6 )

HSP 1 Score: 131.7 bits (330), Expect = 7.2e-31
Identity = 65/151 (43.05%), Postives = 97/151 (64.24%), Query Frame = 0


Query: 3   ADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMG 62
           A  +ISQL+ L + D   DI +++N PGGS  + + IYD M   K  V TV  G+AAS G
Sbjct: 118 AQRVISQLVTLASIDDKSDILMYLNCPGGSTYSVLAIYDCMSWIKPKVGTVAFGVAASQG 177

Query: 63  AFLLASGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGK 122
           A LLA G KG R+ MPN RVMIHQP    GG   ++  ++ E    + K++++++  TG+
Sbjct: 178 ALLLAGGEKGMRYAMPNTRVMIHQPQTGCGGHVEDVRRQVNEAIEARQKIDRMYAAFTGQ 237

Query: 123 PLEQIELDTDRDNFMNPWEAKEYGLIDEVID 154
           PLE+++  T+RD F++  EA E+GLID +++
Sbjct: 238 PLEKVQQYTERDRFLSASEALEFGLIDGLLE 268

The following BLAST results are available for this feature:

BLAST of Lcy02g002270 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SXJ6	2.1e-96	84.08	ATP-dependent Clp protease proteolytic subunit 3, chloroplastic OS=Arabidopsis t...	[more]
A7FYI2	9.4e-52	64.52	ATP-dependent Clp protease proteolytic subunit OS=Clostridium botulinum (strain ...	[more]
A5I6W1	9.4e-52	64.52	ATP-dependent Clp protease proteolytic subunit OS=Clostridium botulinum (strain ...	[more]
C1FLA6	9.4e-52	64.52	ATP-dependent Clp protease proteolytic subunit OS=Clostridium botulinum (strain ...	[more]
B1IND7	9.4e-52	64.52	ATP-dependent Clp protease proteolytic subunit OS=Clostridium botulinum (strain ...	[more]

BLAST of Lcy02g002270 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UZN2	8.4e-120	96.41	ATP-dependent Clp protease proteolytic subunit OS=Cucumis melo var. makuwa OX=11...	[more]
A0A1S3C615	8.4e-120	96.41	ATP-dependent Clp protease proteolytic subunit OS=Cucumis melo OX=3656 GN=LOC103...	[more]
A0A6J1CQN6	2.1e-118	96.41	ATP-dependent Clp protease proteolytic subunit OS=Momordica charantia OX=3673 GN...	[more]
A0A0A0LA84	2.3e-117	95.09	ATP-dependent Clp protease proteolytic subunit OS=Cucumis sativus OX=3659 GN=Csa...	[more]
A0A6J1KEX5	2.9e-112	92.34	ATP-dependent Clp protease proteolytic subunit OS=Cucurbita maxima OX=3661 GN=LO...	[more]

BLAST of Lcy02g002270 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008457103.1	1.7e-119	96.41	PREDICTED: ATP-dependent Clp protease proteolytic subunit 3, chloroplastic [Cucu...	[more]
KAA0060718.1	1.7e-119	96.41	ATP-dependent Clp protease proteolytic subunit 3 [Cucumis melo var. makuwa] >TYK...	[more]
XP_022143418.1	4.3e-118	96.41	ATP-dependent Clp protease proteolytic subunit 3, chloroplastic [Momordica chara...	[more]
XP_038902354.1	1.2e-117	95.52	ATP-dependent Clp protease proteolytic subunit 3, chloroplastic [Benincasa hispi...	[more]
XP_011651427.1	4.7e-117	95.09	ATP-dependent Clp protease proteolytic subunit 3, chloroplastic [Cucumis sativus...	[more]

BLAST of Lcy02g002270 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G66670.1	1.5e-97	84.08	CLP protease proteolytic subunit 3	[more]
AT1G02560.1	1.3e-48	62.00	nuclear encoded CLP protease 5	[more]
AT5G45390.1	5.1e-45	52.69	CLP protease P4	[more]
AT5G23140.1	7.2e-39	47.06	nuclear-encoded CLP protease P7	[more]
AT1G11750.1	7.2e-31	43.05	CLP protease proteolytic subunit 6	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001907	ATP-dependent Clp protease proteolytic subunit	PRINTS	PR00127	CLPPROTEASEP	coord: 52..69 score: 66.67 coord: 130..149 score: 58.0 coord: 73..92 score: 52.0 coord: 21..41 score: 64.64
IPR001907	ATP-dependent Clp protease proteolytic subunit	CDD	cd07017	S14_ClpP_2	coord: 2..151 e-value: 2.50714E-92 score: 266.23
None	No IPR available	GENE3D	3.90.226.10		coord: 1..156 e-value: 3.4E-63 score: 214.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 184..223
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 192..208
None	No IPR available	PANTHER	PTHR10381:SF50	ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT 3, CHLOROPLASTIC	coord: 1..199
IPR023562	Clp protease proteolytic subunit /Translocation-enhancing protein TepA	PFAM	PF00574	CLP_protease	coord: 3..153 e-value: 8.9E-66 score: 221.2
IPR023562	Clp protease proteolytic subunit /Translocation-enhancing protein TepA	PANTHER	PTHR10381	ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT	coord: 1..199
IPR018215	ClpP, Ser active site	PROSITE	PS00381	CLP_PROTEASE_SER	coord: 52..63
IPR033135	ClpP, histidine active site	PROSITE	PS00382	CLP_PROTEASE_HIS	coord: 74..87
IPR029045	ClpP/crotonase-like domain superfamily	SUPERFAMILY	52096	ClpP/crotonase	coord: 2..154

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy02g002270.1	Lcy02g002270.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006515	protein quality control for misfolded or incompletely synthesized proteins
biological_process	GO:0006508	proteolysis
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0009368	endopeptidase Clp complex
cellular_component	GO:0009526	plastid envelope
molecular_function	GO:0051117	ATPase binding
molecular_function	GO:0004176	ATP-dependent peptidase activity
molecular_function	GO:0004252	serine-type endopeptidase activity