Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAAGGAATCTTGGAGTTCTGAGGACGGATTTTGAGGCCTCGAAGGTTCTTGCTGACAATCAGGAATCAAGGCTTCGTTTCTACGAGACTAGAGCCCACAGCATCGCCATGGGCTACCTCATCTGGGAGAGGTTCTTCTTCTTTGCCATCTCTCAGGCTTCTTCTTCCTCCCTCAACTGTCTTCATTGGTGGATGGTTTTGGGTTTGAGTCTTTCCTGTACCTTCGTGTTCCTTTTGTTCCTCCTGGAGGCCGTCACTATGTTGTACCGGACCCAGAACCTGCTCGACATAATTTGCAAGGAACAGACCTATATCTGGCAACAAATATTGGAGGCCAGAAACCAAGATGATGGGTTCGGGTTCAATTTCGGTTTCTACGAGAGGACACTCAGCTATGATTCATTCAGACTTGTGGAGAGGAAGGTTTACATATGCGCCATTGCCTGTGCTCTGCTTGCTGTTACTGCTTTTGAACTATACGCCTGTAAGTACTTGCTATGCCACTGAATTGGACATCGTTTTGGCGGGCTATTTGTAGAGACTTACAATATGTTTTATAGTGTTGTGGCTATGAAGTCTTCATTCAAGAGCTTAATGTAGAAATGCCTCGGTGGAAGGAGATTATGTGTTTATCTTATAAAGAGTTTATGGGGTTGTTTTCTGCTTCTTAA
mRNA sequence
ATGGCAAGGAATCTTGGAGTTCTGAGGACGGATTTTGAGGCCTCGAAGGTTCTTGCTGACAATCAGGAATCAAGGCTTCGTTTCTACGAGACTAGAGCCCACAGCATCGCCATGGGCTACCTCATCTGGGAGAGGTTCTTCTTCTTTGCCATCTCTCAGGCTTCTTCTTCCTCCCTCAACTGTCTTCATTGGTGGATGGTTTTGGGTTTGAGTCTTTCCTGTACCTTCGTGTTCCTTTTGTTCCTCCTGGAGGCCGTCACTATGTTGTACCGGACCCAGAACCTGCTCGACATAATTTGCAAGGAACAGACCTATATCTGGCAACAAATATTGGAGGCCAGAAACCAAGATGATGGGTTCGGGTTCAATTTCGGTTTCTACGAGAGGACACTCAGCTATGATTCATTCAGACTTGTGGAGAGGAAGGTTTACATATGCGCCATTGCCTGTGCTCTGCTTGCTGTTACTGCTTTTGAACTATACGCCTTCTTCATTCAAGAGCTTAATGTAGAAATGCCTCGGTGGAAGGAGATTATGTGTTTATCTTATAAAGAGTTTATGGGGTTGTTTTCTGCTTCTTAA
Coding sequence (CDS)
ATGGCAAGGAATCTTGGAGTTCTGAGGACGGATTTTGAGGCCTCGAAGGTTCTTGCTGACAATCAGGAATCAAGGCTTCGTTTCTACGAGACTAGAGCCCACAGCATCGCCATGGGCTACCTCATCTGGGAGAGGTTCTTCTTCTTTGCCATCTCTCAGGCTTCTTCTTCCTCCCTCAACTGTCTTCATTGGTGGATGGTTTTGGGTTTGAGTCTTTCCTGTACCTTCGTGTTCCTTTTGTTCCTCCTGGAGGCCGTCACTATGTTGTACCGGACCCAGAACCTGCTCGACATAATTTGCAAGGAACAGACCTATATCTGGCAACAAATATTGGAGGCCAGAAACCAAGATGATGGGTTCGGGTTCAATTTCGGTTTCTACGAGAGGACACTCAGCTATGATTCATTCAGACTTGTGGAGAGGAAGGTTTACATATGCGCCATTGCCTGTGCTCTGCTTGCTGTTACTGCTTTTGAACTATACGCCTTCTTCATTCAAGAGCTTAATGTAGAAATGCCTCGGTGGAAGGAGATTATGTGTTTATCTTATAAAGAGTTTATGGGGTTGTTTTCTGCTTCTTAA
Protein sequence
MARNLGVLRTDFEASKVLADNQESRLRFYETRAHSIAMGYLIWERFFFFAISQASSSSLNCLHWWMVLGLSLSCTFVFLLFLLEAVTMLYRTQNLLDIICKEQTYIWQQILEARNQDDGFGFNFGFYERTLSYDSFRLVERKVYICAIACALLAVTAFELYAFFIQELNVEMPRWKEIMCLSYKEFMGLFSAS
Homology
BLAST of Lcy02g000710 vs. ExPASy TrEMBL
Match:
A0A6J1DS87 (uncharacterized protein LOC111023927 OS=Momordica charantia OX=3673 GN=LOC111023927 PE=4 SV=1)
HSP 1 Score: 186.0 bits (471), Expect = 1.4e-43
Identity = 100/168 (59.52%), Postives = 119/168 (70.83%), Query Frame = 0
Query: 6 GVLRTDFEASKVLADNQESRLRFYETRAHSIAMGYLIWERFFFFAISQASSSSLNCLHWW 65
G L+ +FEA K L + QESR++++E+RA +I M YLIW R FFFAISQ SSS L C+ WW
Sbjct: 4 GELKRNFEALKDLVEKQESRVQYHESRAQNITMAYLIWGRLFFFAISQTSSSLLKCIDWW 63
Query: 66 MVLGLSLSCTFVFLLFLLEAVTMLYRTQNLLDIICKEQTYIWQQILEARNQ--------- 125
MVLGLS+SC FV+ LF LEAVTMLYR Q+ +DIICKEQ I QQIL AR+Q
Sbjct: 64 MVLGLSVSCAFVYFLFFLEAVTMLYRVQHQMDIICKEQAEICQQILVARSQLDDVDLAME 123
Query: 126 --DDGFGFNFGFYERTLSYDSFRLVERKVYICAIACALLAVTAFELYA 163
D GF F F+ + L Y +FR+VERK YICA ALLAVTA ELYA
Sbjct: 124 AGDSSDGFQFSFHVKLLEYGAFRIVERKFYICATVSALLAVTAIELYA 171
BLAST of Lcy02g000710 vs. ExPASy TrEMBL
Match:
A0A6J1DTV6 (uncharacterized protein LOC111023951 OS=Momordica charantia OX=3673 GN=LOC111023951 PE=4 SV=1)
HSP 1 Score: 181.8 bits (460), Expect = 2.7e-42
Identity = 105/172 (61.05%), Postives = 127/172 (73.84%), Query Frame = 0
Query: 5 LGVLRTDFEASKVLADNQESRLRFYETRAHSIAMGYLIWERFFFFAISQASSSSLNCLHW 64
L VL+ DFE K+LA+ QE LRFYE+RA +I MGYLIWERFFFFA+SQ +SS L C+ W
Sbjct: 3 LRVLKRDFEELKLLAEKQEPILRFYESRAQNITMGYLIWERFFFFALSQ-TSSPLKCIDW 62
Query: 65 WMVLGLSLSCTFVFLLFLLEAVTMLYRTQNLLDIICKEQTYIWQQILEARNQD------- 124
+VLGLSL C+FV+ L LEAVTMLYRTQN +D+ICKEQ+ I QQIL+A NQD
Sbjct: 63 RVVLGLSLVCSFVYFLLFLEAVTMLYRTQNQMDMICKEQSDICQQILDAGNQDDGGSAME 122
Query: 125 -----DGFGFNFGFYER-TLSYD-SFRLVERKVYICAIACALLAVTAFELYA 163
DG FNF F+ R TL+YD SFR+ ++KVYI AI +L+AVTA ELYA
Sbjct: 123 AGDLSDGVAFNFSFHMRTTLNYDYSFRIFQKKVYISAIISSLVAVTALELYA 173
BLAST of Lcy02g000710 vs. ExPASy TrEMBL
Match:
A0A6J1DSQ0 (uncharacterized protein LOC111023958 OS=Momordica charantia OX=3673 GN=LOC111023958 PE=4 SV=1)
HSP 1 Score: 159.5 bits (402), Expect = 1.4e-35
Identity = 89/167 (53.29%), Postives = 111/167 (66.47%), Query Frame = 0
Query: 5 LGVLRTDFEASKVLADNQESRLRFYETRAHSIAMGYLIWERFFFFAISQASSSSLNCLHW 64
LG L FE K + + QESR+R+YET+ +I GYLI+ R FFF ISQ +SSS NC W
Sbjct: 3 LGELERKFEELKDINEKQESRVRYYETKVQNIVFGYLIFTRLFFFGISQ-TSSSFNCKDW 62
Query: 65 WMVLGLSLSCTFVFLLFLLEAVTMLYRTQNLLDIICKEQTYIWQQILEARNQDD------ 124
W++L LSL C+F++ L L+AV ML+RTQ LDIICKE ++QQIL ++NQDD
Sbjct: 63 WVILALSLLCSFIYFLLFLDAVAMLFRTQYQLDIICKELKELFQQILVSKNQDDVGLSME 122
Query: 125 ----GFGFNFGFYERTLSYDSFRLVERKVYICAIACALLAVTAFELY 162
GF FGF+E+ L D FR+V RKVYI ALLAVTA ELY
Sbjct: 123 TGESSGGFEFGFHEKMLMLDHFRIVGRKVYIYFTVSALLAVTAIELY 168
BLAST of Lcy02g000710 vs. ExPASy TrEMBL
Match:
A0A6J1H1A1 (uncharacterized protein LOC111459231 OS=Cucurbita moschata OX=3662 GN=LOC111459231 PE=4 SV=1)
HSP 1 Score: 156.4 bits (394), Expect = 1.2e-34
Identity = 92/162 (56.79%), Postives = 113/162 (69.75%), Query Frame = 0
Query: 8 LRTDFEASKVLADNQESRLRFYETRAHSIAMGYLIWERFFFFAISQASSSSLNCLHWWMV 67
L+ DFE LA+N++ ++R+Y++R + M YL W RFF+FA+S A SS+L+C+HW MV
Sbjct: 6 LKRDFE---TLAENKQQKVRYYDSRVNYTTMAYLAWLRFFYFALSSA-SSTLHCVHWPMV 65
Query: 68 LGLSLSCTFVFLLFLLEAVTMLYRTQNLLDIICKEQTYIWQQILEARNQD-------DGF 127
LGLSLS +F++ L LL+ LYRT NLLD ICKE T I Q+ILEA NQD DG
Sbjct: 66 LGLSLSSSFLYFLILLQPFIKLYRTHNLLDTICKEHTLICQRILEAMNQDAEAGASNDGV 125
Query: 128 GFNFGFYERTLSYDSFRLVERKVYICAIACALLAVTAFELYA 163
F+FG R LS DSF E KVY CAIA ALLAVTAFELYA
Sbjct: 126 RFDFGLQVRALSDDSFCGGEMKVYGCAIAFALLAVTAFELYA 163
BLAST of Lcy02g000710 vs. ExPASy TrEMBL
Match:
A0A6J1DX74 (uncharacterized protein LOC111023953 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111023953 PE=4 SV=1)
HSP 1 Score: 146.0 bits (367), Expect = 1.7e-31
Identity = 84/167 (50.30%), Postives = 104/167 (62.28%), Query Frame = 0
Query: 5 LGVLRTDFEASKVLADNQESRLRFYETRAHSIAMGYLIWERFFFFAISQASSSSLNCLHW 64
+G LR F K + + QESR+R++E + I GYLI R FFF ISQ SSS C W
Sbjct: 3 VGELRRKFGELKDINEKQESRVRYHEAKFQKIVSGYLILTRLFFFGISQTSSS--KCHDW 62
Query: 65 WMVLGLSLSCTFVFLLFLLEAVTMLYRTQNLLDIICKEQTYIWQQILEARNQDD------ 124
W++L LSL C+FV+ L L+A T LY+T+ LD+ICKE + QQIL A+NQDD
Sbjct: 63 WVILSLSLLCSFVYFLLFLDAATRLYQTKGQLDMICKELIEVCQQILVAQNQDDVDLAME 122
Query: 125 ----GFGFNFGFYERTLSYDSFRLVERKVYICAIACALLAVTAFELY 162
GF FGF+E+ L D FR V RKVYI CAL+AVTA ELY
Sbjct: 123 GGDFSDGFEFGFHEKMLVLDHFRFVGRKVYIYFTVCALVAVTAIELY 167
BLAST of Lcy02g000710 vs. NCBI nr
Match:
XP_022157130.1 (uncharacterized protein LOC111023927 [Momordica charantia])
HSP 1 Score: 186.0 bits (471), Expect = 3.0e-43
Identity = 100/168 (59.52%), Postives = 119/168 (70.83%), Query Frame = 0
Query: 6 GVLRTDFEASKVLADNQESRLRFYETRAHSIAMGYLIWERFFFFAISQASSSSLNCLHWW 65
G L+ +FEA K L + QESR++++E+RA +I M YLIW R FFFAISQ SSS L C+ WW
Sbjct: 4 GELKRNFEALKDLVEKQESRVQYHESRAQNITMAYLIWGRLFFFAISQTSSSLLKCIDWW 63
Query: 66 MVLGLSLSCTFVFLLFLLEAVTMLYRTQNLLDIICKEQTYIWQQILEARNQ--------- 125
MVLGLS+SC FV+ LF LEAVTMLYR Q+ +DIICKEQ I QQIL AR+Q
Sbjct: 64 MVLGLSVSCAFVYFLFFLEAVTMLYRVQHQMDIICKEQAEICQQILVARSQLDDVDLAME 123
Query: 126 --DDGFGFNFGFYERTLSYDSFRLVERKVYICAIACALLAVTAFELYA 163
D GF F F+ + L Y +FR+VERK YICA ALLAVTA ELYA
Sbjct: 124 AGDSSDGFQFSFHVKLLEYGAFRIVERKFYICATVSALLAVTAIELYA 171
BLAST of Lcy02g000710 vs. NCBI nr
Match:
XP_022157172.1 (uncharacterized protein LOC111023951 [Momordica charantia])
HSP 1 Score: 181.8 bits (460), Expect = 5.6e-42
Identity = 105/172 (61.05%), Postives = 127/172 (73.84%), Query Frame = 0
Query: 5 LGVLRTDFEASKVLADNQESRLRFYETRAHSIAMGYLIWERFFFFAISQASSSSLNCLHW 64
L VL+ DFE K+LA+ QE LRFYE+RA +I MGYLIWERFFFFA+SQ +SS L C+ W
Sbjct: 3 LRVLKRDFEELKLLAEKQEPILRFYESRAQNITMGYLIWERFFFFALSQ-TSSPLKCIDW 62
Query: 65 WMVLGLSLSCTFVFLLFLLEAVTMLYRTQNLLDIICKEQTYIWQQILEARNQD------- 124
+VLGLSL C+FV+ L LEAVTMLYRTQN +D+ICKEQ+ I QQIL+A NQD
Sbjct: 63 RVVLGLSLVCSFVYFLLFLEAVTMLYRTQNQMDMICKEQSDICQQILDAGNQDDGGSAME 122
Query: 125 -----DGFGFNFGFYER-TLSYD-SFRLVERKVYICAIACALLAVTAFELYA 163
DG FNF F+ R TL+YD SFR+ ++KVYI AI +L+AVTA ELYA
Sbjct: 123 AGDLSDGVAFNFSFHMRTTLNYDYSFRIFQKKVYISAIISSLVAVTALELYA 173
BLAST of Lcy02g000710 vs. NCBI nr
Match:
XP_022157182.1 (uncharacterized protein LOC111023958 [Momordica charantia] >XP_022157183.1 uncharacterized protein LOC111023958 [Momordica charantia])
HSP 1 Score: 159.5 bits (402), Expect = 3.0e-35
Identity = 89/167 (53.29%), Postives = 111/167 (66.47%), Query Frame = 0
Query: 5 LGVLRTDFEASKVLADNQESRLRFYETRAHSIAMGYLIWERFFFFAISQASSSSLNCLHW 64
LG L FE K + + QESR+R+YET+ +I GYLI+ R FFF ISQ +SSS NC W
Sbjct: 3 LGELERKFEELKDINEKQESRVRYYETKVQNIVFGYLIFTRLFFFGISQ-TSSSFNCKDW 62
Query: 65 WMVLGLSLSCTFVFLLFLLEAVTMLYRTQNLLDIICKEQTYIWQQILEARNQDD------ 124
W++L LSL C+F++ L L+AV ML+RTQ LDIICKE ++QQIL ++NQDD
Sbjct: 63 WVILALSLLCSFIYFLLFLDAVAMLFRTQYQLDIICKELKELFQQILVSKNQDDVGLSME 122
Query: 125 ----GFGFNFGFYERTLSYDSFRLVERKVYICAIACALLAVTAFELY 162
GF FGF+E+ L D FR+V RKVYI ALLAVTA ELY
Sbjct: 123 TGESSGGFEFGFHEKMLMLDHFRIVGRKVYIYFTVSALLAVTAIELY 168
BLAST of Lcy02g000710 vs. NCBI nr
Match:
XP_022957798.1 (uncharacterized protein LOC111459231 [Cucurbita moschata])
HSP 1 Score: 156.4 bits (394), Expect = 2.5e-34
Identity = 92/162 (56.79%), Postives = 113/162 (69.75%), Query Frame = 0
Query: 8 LRTDFEASKVLADNQESRLRFYETRAHSIAMGYLIWERFFFFAISQASSSSLNCLHWWMV 67
L+ DFE LA+N++ ++R+Y++R + M YL W RFF+FA+S A SS+L+C+HW MV
Sbjct: 6 LKRDFE---TLAENKQQKVRYYDSRVNYTTMAYLAWLRFFYFALSSA-SSTLHCVHWPMV 65
Query: 68 LGLSLSCTFVFLLFLLEAVTMLYRTQNLLDIICKEQTYIWQQILEARNQD-------DGF 127
LGLSLS +F++ L LL+ LYRT NLLD ICKE T I Q+ILEA NQD DG
Sbjct: 66 LGLSLSSSFLYFLILLQPFIKLYRTHNLLDTICKEHTLICQRILEAMNQDAEAGASNDGV 125
Query: 128 GFNFGFYERTLSYDSFRLVERKVYICAIACALLAVTAFELYA 163
F+FG R LS DSF E KVY CAIA ALLAVTAFELYA
Sbjct: 126 RFDFGLQVRALSDDSFCGGEMKVYGCAIAFALLAVTAFELYA 163
BLAST of Lcy02g000710 vs. NCBI nr
Match:
XP_022157176.1 (uncharacterized protein LOC111023953 isoform X2 [Momordica charantia])
HSP 1 Score: 146.0 bits (367), Expect = 3.4e-31
Identity = 84/167 (50.30%), Postives = 104/167 (62.28%), Query Frame = 0
Query: 5 LGVLRTDFEASKVLADNQESRLRFYETRAHSIAMGYLIWERFFFFAISQASSSSLNCLHW 64
+G LR F K + + QESR+R++E + I GYLI R FFF ISQ SSS C W
Sbjct: 3 VGELRRKFGELKDINEKQESRVRYHEAKFQKIVSGYLILTRLFFFGISQTSSS--KCHDW 62
Query: 65 WMVLGLSLSCTFVFLLFLLEAVTMLYRTQNLLDIICKEQTYIWQQILEARNQDD------ 124
W++L LSL C+FV+ L L+A T LY+T+ LD+ICKE + QQIL A+NQDD
Sbjct: 63 WVILSLSLLCSFVYFLLFLDAATRLYQTKGQLDMICKELIEVCQQILVAQNQDDVDLAME 122
Query: 125 ----GFGFNFGFYERTLSYDSFRLVERKVYICAIACALLAVTAFELY 162
GF FGF+E+ L D FR V RKVYI CAL+AVTA ELY
Sbjct: 123 GGDFSDGFEFGFHEKMLVLDHFRFVGRKVYIYFTVCALVAVTAIELY 167
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1DS87 | 1.4e-43 | 59.52 | uncharacterized protein LOC111023927 OS=Momordica charantia OX=3673 GN=LOC111023... | [more] |
A0A6J1DTV6 | 2.7e-42 | 61.05 | uncharacterized protein LOC111023951 OS=Momordica charantia OX=3673 GN=LOC111023... | [more] |
A0A6J1DSQ0 | 1.4e-35 | 53.29 | uncharacterized protein LOC111023958 OS=Momordica charantia OX=3673 GN=LOC111023... | [more] |
A0A6J1H1A1 | 1.2e-34 | 56.79 | uncharacterized protein LOC111459231 OS=Cucurbita moschata OX=3662 GN=LOC1114592... | [more] |
A0A6J1DX74 | 1.7e-31 | 50.30 | uncharacterized protein LOC111023953 isoform X2 OS=Momordica charantia OX=3673 G... | [more] |
Match Name | E-value | Identity | Description | |
XP_022157130.1 | 3.0e-43 | 59.52 | uncharacterized protein LOC111023927 [Momordica charantia] | [more] |
XP_022157172.1 | 5.6e-42 | 61.05 | uncharacterized protein LOC111023951 [Momordica charantia] | [more] |
XP_022157182.1 | 3.0e-35 | 53.29 | uncharacterized protein LOC111023958 [Momordica charantia] >XP_022157183.1 uncha... | [more] |
XP_022957798.1 | 2.5e-34 | 56.79 | uncharacterized protein LOC111459231 [Cucurbita moschata] | [more] |
XP_022157176.1 | 3.4e-31 | 50.30 | uncharacterized protein LOC111023953 isoform X2 [Momordica charantia] | [more] |
Match Name | E-value | Identity | Description | |