Lcy01g016130 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AGGTTTTCCAAATTGCCGCCTCATCGAAAGAAGAGAAGTCTCCTTTTTTCTCCGCTAGGGTTTTCGATCGCCAATCTTCGTTTCTTCTGTTTTCTCAAATCCGAACTTCTTTTCTCTTTTTTCTTTCAAATCTTCGCCGAATCCTTCCCATAATAGACACAGATGTCTCGTTGCTTTCCTTACCCACCTCCTGGTTACGTGAGGAAGGTGGCTGGGACCGAGGCGGCCTTGATCGAATCGATTAAGGTTTGTTTGAGCTATTTGGTTGGTTTTCAATAATGTATGCTGGATTCAATTGTGTTCTGATTCCAATTGATTGCGAGATCTTCTTGGAATTGTAACTTTTTGGATGGGGGTATATCTGTAATCAGGAACGGCTTTTTTCTGTAATTTTTAAGGCGATGGGGGGAAGAATCGGTATGGGTATGGGTTGAGTTACAAGTTTTTGTACCCTAATGATAGGAATCTTGATTTTGGATTGTTGGGAGTGCAGTTTCTAGCTTCAGTTTTGTTCGTCTGTGTGTCAAGTAATTTGACGTGTATTATCTCCATAAGGAACGAGATCTCCGAGAGTTGAGTGATTAGATAGTGGGTTTTGGGAGTCGTTTAGTTGCATGTCTTACAAATCTTTCTTGGATCTTGTATGGATGTTCAGCCTTTACAATCAGAACACTTAAGTAAACATTTGAAGCGTATAATTTTTTAATAGATCGTTTATTCTTAATGGGAACGTCATGGTTTTCTAAATATTTTTTTAATTCAGTTCCTGATTTTTCAATTGGATTGCTCTCTAAAAGTTTTAAATGGAAGAGATTTAGGATTTACAGTAATTTGTTAAATATCGACGCCTTTGTATCAATTTTACTCCGAACCTTTCCCCCATGATATCCTTAGGCATATGAATACATGATGTGAATGTACGAATTTGCTACCTAGAATGTATGATTATCTGAGTCCAGATGAAAGTTCTCCTTTACAATATAGGAGTAGCAGCTATCCTTGGGTTGCATTTTACTAGTTAGTTAGGGCATGGTTGATCTGTTTGGTGCTTGCGTCATCTGCCCTTTTTGAAATGGTTATTCTGGTGCGTTATAGCTCCAATCTGAAAGACGAGAAAGCAAGACTGAAAGAAAGAAAGAGAAAAGTAAGCACAAGAAAGAGAAGAGTAAGGACAAGAAACACAAAAGCAAAGAACGTAAAGAAAAATCTTCTCGTAGCCGGGACCTCAGTGATCAGAAACGAAAGGAATGCATTAAGGAAGCCAAGGGCCTTCTAAAGGAATCCAAAGTTGAAGCTGATCAATTAGAAAAGAGTGGTCTCACTGAAGAGCATGGGCAACCAGTATGGCCTCAGAGCCCCGGCTACTTGTCTGATGGAACTCAGATCAACCACAAGAGGAAAAGGGATGCTTCATTACAGCCTAATGAAGGTTGTAAGCCTGGTGGGTTCTCTTTATAGATAATAGGATCTTTTATGAAATAAGTACTCTTGGCCACTTGAACAAACGCTAATATATTATTGATCACAAACAGGAAAAATCATCCGGATCAAACTGGCTTCTTCACTAAGCCAGCAAGAGGATTCATCAGCTGGCAGAGAACAGCAGACGTGTTCTACATCTGGTCGTGGTAATTTTCTTGATCAAAAGAGAGATGACAACAGCCGTGGACCCATTCAGCAAAAGACTTGCCCCGCCAATGCTGTCACAGCTGTTGCTATCAAGGATCCCATTTCTAAACCTAAGATCAAAGACCCTCTTTCGCATGCTGTCAAGGACATTACTTCTCATGGGAATGTTGTGTCATTACCTCCGCGCAGAAGTTCTGCTGAATCTGCATATGAGGCTCTGTTTGAGAAGTGGGTACCACCTCCGCTTCTGTTGGAGCAACAAACGGATGATGAAGAGTGGCTCTTTGGAACAATAAAGCAAGATGGACCAAGTACCAAGTCCAACAAAGCTTTCAGTCCTGTTCCCAGCTGTAGAAGTTCCAGTCTCTGGCCGAGAGGACAATATCTGCCTGAAGCGGATGTTTATTCATTGCCTTACACGATTCCATTTTGATTTTGAATTCTTTACTTGCAGAGTAATGTGTACAGTACGCCGGTAGGAACAATCTTTTTCCTTGGCGTTATAATTGTTTTAGAAACAATATAATTGACATTCAATTTTGTTCTCTCTTGTGGGCGATGATGCATTCTGCTGGTGATTCTTCCCATGAAGATAATTAAGTCAACTTAATTATCTAGAGATATGTAGACATGATGTGATGTAATGTAACGCTTAGAGATATATGTCGATGACAAAATATAGCTCTGCTATTTTTGCCTTTTAAGATTGAAGATTTTGACACTCCAGAC AGGTTTTCCAAATTGCCGCCTCATCGAAAGAAGAGAAGTCTCCTTTTTTCTCCGCTAGGGTTTTCGATCGCCAATCTTCGTTTCTTCTGTTTTCTCAAATCCGAACTTCTTTTCTCTTTTTTCTTTCAAATCTTCGCCGAATCCTTCCCATAATAGACACAGATGTCTCGTTGCTTTCCTTACCCACCTCCTGGTTACGTGAGGAAGGTGGCTGGGACCGAGGCGGCCTTGATCGAATCGATTAAGCTCCAATCTGAAAGACGAGAAAGCAAGACTGAAAGAAAGAAAGAGAAAAGTAAGCACAAGAAAGAGAAGAGTAAGGACAAGAAACACAAAAGCAAAGAACGTAAAGAAAAATCTTCTCGTAGCCGGGACCTCAGTGATCAGAAACGAAAGGAATGCATTAAGGAAGCCAAGGGCCTTCTAAAGGAATCCAAAGTTGAAGCTGATCAATTAGAAAAGAGTGGTCTCACTGAAGAGCATGGGCAACCAGTATGGCCTCAGAGCCCCGGCTACTTGTCTGATGGAACTCAGATCAACCACAAGAGGAAAAGGGATGCTTCATTACAGCCTAATGAAGGTTGTAAGCCTGGAAAAATCATCCGGATCAAACTGGCTTCTTCACTAAGCCAGCAAGAGGATTCATCAGCTGGCAGAGAACAGCAGACGTGTTCTACATCTGGTCGTGGTAATTTTCTTGATCAAAAGAGAGATGACAACAGCCGTGGACCCATTCAGCAAAAGACTTGCCCCGCCAATGCTGTCACAGCTGTTGCTATCAAGGATCCCATTTCTAAACCTAAGATCAAAGACCCTCTTTCGCATGCTGTCAAGGACATTACTTCTCATGGGAATGTTGTGTCATTACCTCCGCGCAGAAGTTCTGCTGAATCTGCATATGAGGCTCTGTTTGAGAAGTGGGTACCACCTCCGCTTCTGTTGGAGCAACAAACGGATGATGAAGAGTGGCTCTTTGGAACAATAAAGCAAGATGGACCAAGTACCAAGTCCAACAAAGCTTTCAGTCCTGTTCCCAGCTGTAGAAGTTCCAGTCTCTGGCCGAGAGGACAATATCTGCCTGAAGCGGATGTTTATTCATTGCCTTACACGATTCCATTTTGATTTTGAATTCTTTACTTGCAGAGTAATGTGTACAGTACGCCGGTAGGAACAATCTTTTTCCTTGGCGTTATAATTGTTTTAGAAACAATATAATTGACATTCAATTTTGTTCTCTCTTGTGGGCGATGATGCATTCTGCTGGTGATTCTTCCCATGAAGATAATTAAGTCAACTTAATTATCTAGAGATATGTAGACATGATGTGATGTAATGTAACGCTTAGAGATATATGTCGATGACAAAATATAGCTCTGCTATTTTTGCCTTTTAAGATTGAAGATTTTGACACTCCAGAC ATGTCTCGTTGCTTTCCTTACCCACCTCCTGGTTACGTGAGGAAGGTGGCTGGGACCGAGGCGGCCTTGATCGAATCGATTAAGCTCCAATCTGAAAGACGAGAAAGCAAGACTGAAAGAAAGAAAGAGAAAAGTAAGCACAAGAAAGAGAAGAGTAAGGACAAGAAACACAAAAGCAAAGAACGTAAAGAAAAATCTTCTCGTAGCCGGGACCTCAGTGATCAGAAACGAAAGGAATGCATTAAGGAAGCCAAGGGCCTTCTAAAGGAATCCAAAGTTGAAGCTGATCAATTAGAAAAGAGTGGTCTCACTGAAGAGCATGGGCAACCAGTATGGCCTCAGAGCCCCGGCTACTTGTCTGATGGAACTCAGATCAACCACAAGAGGAAAAGGGATGCTTCATTACAGCCTAATGAAGGTTGTAAGCCTGGAAAAATCATCCGGATCAAACTGGCTTCTTCACTAAGCCAGCAAGAGGATTCATCAGCTGGCAGAGAACAGCAGACGTGTTCTACATCTGGTCGTGGTAATTTTCTTGATCAAAAGAGAGATGACAACAGCCGTGGACCCATTCAGCAAAAGACTTGCCCCGCCAATGCTGTCACAGCTGTTGCTATCAAGGATCCCATTTCTAAACCTAAGATCAAAGACCCTCTTTCGCATGCTGTCAAGGACATTACTTCTCATGGGAATGTTGTGTCATTACCTCCGCGCAGAAGTTCTGCTGAATCTGCATATGAGGCTCTGTTTGAGAAGTGGGTACCACCTCCGCTTCTGTTGGAGCAACAAACGGATGATGAAGAGTGGCTCTTTGGAACAATAAAGCAAGATGGACCAAGTACCAAGTCCAACAAAGCTTTCAGTCCTGTTCCCAGCTGTAGAAGTTCCAGTCTCTGGCCGAGAGGACAATATCTGCCTGAAGCGGATGTTTATTCATTGCCTTACACGATTCCATTTTGA MSRCFPYPPPGYVRKVAGTEAALIESIKLQSERRESKTERKKEKSKHKKEKSKDKKHKSKERKEKSSRSRDLSDQKRKECIKEAKGLLKESKVEADQLEKSGLTEEHGQPVWPQSPGYLSDGTQINHKRKRDASLQPNEGCKPGKIIRIKLASSLSQQEDSSAGREQQTCSTSGRGNFLDQKRDDNSRGPIQQKTCPANAVTAVAIKDPISKPKIKDPLSHAVKDITSHGNVVSLPPRRSSAESAYEALFEKWVPPPLLLEQQTDDEEWLFGTIKQDGPSTKSNKAFSPVPSCRSSSLWPRGQYLPEADVYSLPYTIPF Homology
BLAST of Lcy01g016130 vs. ExPASy TrEMBL
Match: A0A6J1KC15 (uncharacterized protein LOC111492505 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111492505 PE=4 SV=1) HSP 1 Score: 444.1 bits (1141), Expect = 4.9e-121 Identity = 250/341 (73.31%), Postives = 275/341 (80.65%), Query Frame = 0
BLAST of Lcy01g016130 vs. ExPASy TrEMBL
Match: A0A6J1CT76 (chromatin assembly factor 1 subunit A-like OS=Momordica charantia OX=3673 GN=LOC111013996 PE=4 SV=1) HSP 1 Score: 443.4 bits (1139), Expect = 8.3e-121 Identity = 249/327 (76.15%), Postives = 273/327 (83.49%), Query Frame = 0
BLAST of Lcy01g016130 vs. ExPASy TrEMBL
Match: A0A6J1HBK0 (DNA ligase 1 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111462522 PE=4 SV=1) HSP 1 Score: 443.0 bits (1138), Expect = 1.1e-120 Identity = 247/321 (76.95%), Postives = 275/321 (85.67%), Query Frame = 0
BLAST of Lcy01g016130 vs. ExPASy TrEMBL
Match: A0A6J1KAB9 (uncharacterized protein LOC111492505 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111492505 PE=4 SV=1) HSP 1 Score: 427.9 bits (1099), Expect = 3.6e-116 Identity = 246/341 (72.14%), Postives = 271/341 (79.47%), Query Frame = 0
BLAST of Lcy01g016130 vs. ExPASy TrEMBL
Match: A0A6J1HD43 (uncharacterized protein LOC111462522 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111462522 PE=4 SV=1) HSP 1 Score: 426.8 bits (1096), Expect = 8.0e-116 Identity = 243/321 (75.70%), Postives = 271/321 (84.42%), Query Frame = 0
BLAST of Lcy01g016130 vs. NCBI nr
Match: XP_038885448.1 (DNA ligase 1 isoform X1 [Benincasa hispida]) HSP 1 Score: 453.0 bits (1164), Expect = 2.2e-123 Identity = 265/330 (80.30%), Postives = 282/330 (85.45%), Query Frame = 0
BLAST of Lcy01g016130 vs. NCBI nr
Match: XP_023545923.1 (uncharacterized protein LOC111805212 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 448.4 bits (1152), Expect = 5.3e-122 Identity = 251/341 (73.61%), Postives = 277/341 (81.23%), Query Frame = 0
BLAST of Lcy01g016130 vs. NCBI nr
Match: XP_022997629.1 (uncharacterized protein LOC111492505 isoform X1 [Cucurbita maxima]) HSP 1 Score: 444.1 bits (1141), Expect = 1.0e-120 Identity = 250/341 (73.31%), Postives = 275/341 (80.65%), Query Frame = 0
BLAST of Lcy01g016130 vs. NCBI nr
Match: XP_022144272.1 (chromatin assembly factor 1 subunit A-like [Momordica charantia]) HSP 1 Score: 443.4 bits (1139), Expect = 1.7e-120 Identity = 249/327 (76.15%), Postives = 273/327 (83.49%), Query Frame = 0
BLAST of Lcy01g016130 vs. NCBI nr
Match: XP_022961881.1 (DNA ligase 1 isoform X1 [Cucurbita moschata]) HSP 1 Score: 443.0 bits (1138), Expect = 2.2e-120 Identity = 247/321 (76.95%), Postives = 275/321 (85.67%), Query Frame = 0
BLAST of Lcy01g016130 vs. TAIR 10
Match: AT1G75860.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G20100.1); Has 258 Blast hits to 235 proteins in 58 species: Archae - 0; Bacteria - 4; Metazoa - 59; Fungi - 16; Plants - 90; Viruses - 0; Other Eukaryotes - 89 (source: NCBI BLink). ) HSP 1 Score: 92.4 bits (228), Expect = 6.9e-19 Identity = 106/332 (31.93%), Postives = 149/332 (44.88%), Query Frame = 0
BLAST of Lcy01g016130 vs. TAIR 10
Match: AT1G20100.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G75860.1); Has 471 Blast hits to 438 proteins in 92 species: Archae - 0; Bacteria - 14; Metazoa - 217; Fungi - 43; Plants - 91; Viruses - 1; Other Eukaryotes - 105 (source: NCBI BLink). ) HSP 1 Score: 85.5 bits (210), Expect = 8.4e-17 Identity = 100/337 (29.67%), Postives = 150/337 (44.51%), Query Frame = 0
BLAST of Lcy01g016130 vs. TAIR 10
Match: AT4G35940.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G17787.1). ) HSP 1 Score: 60.5 bits (145), Expect = 2.9e-09 Identity = 109/403 (27.05%), Postives = 172/403 (42.68%), Query Frame = 0
BLAST of Lcy01g016130 vs. TAIR 10
Match: AT2G17787.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G35940.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 55.5 bits (132), Expect = 9.4e-08 Identity = 105/350 (30.00%), Postives = 151/350 (43.14%), Query Frame = 0
BLAST of Lcy01g016130 vs. TAIR 10
Match: AT1G20100.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G75860.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 50.8 bits (120), Expect = 2.3e-06 Identity = 63/179 (35.20%), Postives = 88/179 (49.16%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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