Lcy01g015470 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy01g015470
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Poly(A)-specific ribonuclease
Location	Chr01: 36987174 .. 36988404 (-)
RNA-Seq Expression	Lcy01g015470
Synteny	Lcy01g015470

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTTAGGGAGGGTCTAAGCCGAGCTCTCAAGCCCTTGTCCTTGTGTGCTCCTTCGCCTCTCCTTCCTAAACCTACAACGCTTCTTCTTCTTCTTCGACGAAGCACAAAAATCACTACTTCTCTGCTTCAAGATCTCTCACTATCACCCTTCAATTCAGCATTTTCGAGGTCAGATCCGCTTGCCCCTTCTGGGTTTTTCCCCTCTTCTGTTTCTAGGGTTCTGGTATCCTCCTCACTCGATTTTTCTTCACTTAGGGTTTCTTTTTCTCCGGGAGATTTCTCATACCCTCCTTCTTTTCTCACGGCCCGCCTCAGGTTTCCAGGGCCGAAGCCTTTTTCCCCCAATTTCTCACCGTGGGTTCTTCCCCCTTTTGCCATTTTGTTGCTTCTCCTCGCGTTCAAGATATGTCGATTTTGCCGAAAGGTGAGTCGATTCATATCCGTGAGGTGTGGAACCATAATCTCGAGGAGGAGTTCGCTCTAATACGTGAAATCGTCGACCAATTTAACTACATAGCCATGGATACCGAGTTCCCCGGTGTCGTCGTTCGTCCTGTCGGTCCCTTTAAGAACATCAATGAATATAACTACCAAACCCTCAAAGACAATGTCGACACCTTGAAGTTGATTCAGTTGGGCCTTACGTTTTCCGATGAGAATGGGAATCTCCCCACTTGTGGAACCGACAAATTTTGCATTTGGCAGTTCAATTTCCGCGAGTTCAATATTAGTGAAGATATTTTTGCAACTGATTCCATTGAGCTCTTGCGCCAGTGTGGTATTGATTTTAAGAAGAACAACGAAGAGGGTATTGATGTCAATCGCTTCGGTGAGCTTCTAATGTCATCTGGGATTGTCTTAAACGATAGTGTAAACTGGGTGACGTTTCACAGTGGGTATGATTTTGGCTACTTGTTGAAATTGTTGACTTGCCGAAGCTTACCAGGCACGCAGGCGGGGTTTTTTGATTTGATCAATATGTATTTCCCAATGGTTTATGATATCAAGCATTTGATGAAGTTTTGCAACAGTTTCCATGGTGGGCTGAACAAGCTTGCAGAGTTATTAGATGTGGAGAGGATTGGAGTTTGCCATCAAGCAGGATCAGATAGCCTTCTTACTGCCTGTACTTTCAGGAAGTTAAGGGATACTTTTTTCAATGGGTCTACACAGAAATACGCAGGTGTTTTATATGGTCTCGGTGTTGAAAGTGGGCAGACTACTAATTGA

mRNA sequence

ATTTTAGGGAGGGTCTAAGCCGAGCTCTCAAGCCCTTGTCCTTGTGTGCTCCTTCGCCTCTCCTTCCTAAACCTACAACGCTTCTTCTTCTTCTTCGACGAAGCACAAAAATCACTACTTCTCTGCTTCAAGATCTCTCACTATCACCCTTCAATTCAGCATTTTCGAGGTCAGATCCGCTTGCCCCTTCTGGGTTTTTCCCCTCTTCTGTTTCTAGGGTTCTGGTATCCTCCTCACTCGATTTTTCTTCACTTAGGGTTTCTTTTTCTCCGGGAGATTTCTCATACCCTCCTTCTTTTCTCACGGCCCGCCTCAGGTTTCCAGGGCCGAAGCCTTTTTCCCCCAATTTCTCACCGTGGGTTCTTCCCCCTTTTGCCATTTTGTTGCTTCTCCTCGCGTTCAAGATATGTCGATTTTGCCGAAAGGTGAGTCGATTCATATCCGTGAGGTGTGGAACCATAATCTCGAGGAGGAGTTCGCTCTAATACGTGAAATCGTCGACCAATTTAACTACATAGCCATGGATACCGAGTTCCCCGGTGTCGTCGTTCGTCCTGTCGGTCCCTTTAAGAACATCAATGAATATAACTACCAAACCCTCAAAGACAATGTCGACACCTTGAAGTTGATTCAGTTGGGCCTTACGTTTTCCGATGAGAATGGGAATCTCCCCACTTGTGGAACCGACAAATTTTGCATTTGGCAGTTCAATTTCCGCGAGTTCAATATTAGTGAAGATATTTTTGCAACTGATTCCATTGAGCTCTTGCGCCAGTGTGGTATTGATTTTAAGAAGAACAACGAAGAGGGTATTGATGTCAATCGCTTCGGTGAGCTTCTAATGTCATCTGGGATTGTCTTAAACGATAGTGTAAACTGGGTGACGTTTCACAGTGGGTATGATTTTGGCTACTTGTTGAAATTGTTGACTTGCCGAAGCTTACCAGGCACGCAGGCGGGGTTTTTTGATTTGATCAATATGTATTTCCCAATGGTTTATGATATCAAGCATTTGATGAAGTTTTGCAACAGTTTCCATGGTGGGCTGAACAAGCTTGCAGAGTTATTAGATGTGGAGAGGATTGGAGTTTGCCATCAAGCAGGATCAGATAGCCTTCTTACTGCCTGTACTTTCAGGAAGTTAAGGGATACTTTTTTCAATGGGTCTACACAGAAATACGCAGGTGTTTTATATGGTCTCGGTGTTGAAAGTGGGCAGACTACTAATTGA

Coding sequence (CDS)

ATGTCGATTTTGCCGAAAGGTGAGTCGATTCATATCCGTGAGGTGTGGAACCATAATCTCGAGGAGGAGTTCGCTCTAATACGTGAAATCGTCGACCAATTTAACTACATAGCCATGGATACCGAGTTCCCCGGTGTCGTCGTTCGTCCTGTCGGTCCCTTTAAGAACATCAATGAATATAACTACCAAACCCTCAAAGACAATGTCGACACCTTGAAGTTGATTCAGTTGGGCCTTACGTTTTCCGATGAGAATGGGAATCTCCCCACTTGTGGAACCGACAAATTTTGCATTTGGCAGTTCAATTTCCGCGAGTTCAATATTAGTGAAGATATTTTTGCAACTGATTCCATTGAGCTCTTGCGCCAGTGTGGTATTGATTTTAAGAAGAACAACGAAGAGGGTATTGATGTCAATCGCTTCGGTGAGCTTCTAATGTCATCTGGGATTGTCTTAAACGATAGTGTAAACTGGGTGACGTTTCACAGTGGGTATGATTTTGGCTACTTGTTGAAATTGTTGACTTGCCGAAGCTTACCAGGCACGCAGGCGGGGTTTTTTGATTTGATCAATATGTATTTCCCAATGGTTTATGATATCAAGCATTTGATGAAGTTTTGCAACAGTTTCCATGGTGGGCTGAACAAGCTTGCAGAGTTATTAGATGTGGAGAGGATTGGAGTTTGCCATCAAGCAGGATCAGATAGCCTTCTTACTGCCTGTACTTTCAGGAAGTTAAGGGATACTTTTTTCAATGGGTCTACACAGAAATACGCAGGTGTTTTATATGGTCTCGGTGTTGAAAGTGGGCAGACTACTAATTGA

Protein sequence

MSILPKGESIHIREVWNHNLEEEFALIREIVDQFNYIAMDTEFPGVVVRPVGPFKNINEYNYQTLKDNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNISEDIFATDSIELLRQCGIDFKKNNEEGIDVNRFGELLMSSGIVLNDSVNWVTFHSGYDFGYLLKLLTCRSLPGTQAGFFDLINMYFPMVYDIKHLMKFCNSFHGGLNKLAELLDVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVESGQTTN

Homology

[Close]

BLAST of Lcy01g015470 vs. ExPASy Swiss-Prot
Match: Q9SKZ2 (Probable CCR4-associated factor 1 homolog 7 OS=Arabidopsis thaliana OX=3702 GN=CAF1-7 PE=2 SV=2)

HSP 1 Score: 447.6 bits (1150), Expect = 1.0e-124
Identity = 208/272 (76.47%), Postives = 239/272 (87.87%), Query Frame = 0


Query: 1   MSILPKGESIHIREVWNHNLEEEFALIREIVDQFNYIAMDTEFPGVVVRPVGPFKNINEY 60
           MS+  K +SI IREVWN NLE E ALIRE+VD F ++AMDTEFPG+V RPVG FK   EY
Sbjct: 1   MSLFLKDDSIQIREVWNDNLESEMALIREVVDDFPFVAMDTEFPGIVCRPVGTFKTNTEY 60

Query: 61  NYQTLKDNVDTLKLIQLGLTFSDENGNLPTCGTD-KFCIWQFNFREFNISEDIFATDSIE 120
           +Y+TLK NV+ LK+IQLGLTFSDE GNLPTCGTD K+CIWQFNFREF++  DI+ATDSIE
Sbjct: 61  HYETLKTNVNILKMIQLGLTFSDEKGNLPTCGTDNKYCIWQFNFREFDLESDIYATDSIE 120

Query: 121 LLRQCGIDFKKNNEEGIDVNRFGELLMSSGIVLNDSVNWVTFHSGYDFGYLLKLLTCRSL 180
           LLRQ GIDF KNNE GID  RF ELLMSSGIVLN++V+WVTFHSGYDFGYLLKLLTC++L
Sbjct: 121 LLRQSGIDFVKNNEFGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNL 180

Query: 181 PGTQAGFFDLINMYFPMVYDIKHLMKFCNSFHGGLNKLAELLDVERIGVCHQAGSDSLLT 240
           P TQ GFF++I++YFP VYDIKHLMKFCNS HGGLNKLAELLDVER+G+CHQAGSDSLLT
Sbjct: 181 PETQTGFFEMISVYFPRVYDIKHLMKFCNSLHGGLNKLAELLDVERVGICHQAGSDSLLT 240

Query: 241 ACTFRKLRDTFFNGSTQKYAGVLYGLGVESGQ 272
           +CTFRKL++ FF GS +KY+GVLYGLGVE+GQ
Sbjct: 241 SCTFRKLQENFFIGSMEKYSGVLYGLGVENGQ 272

[Close]

BLAST of Lcy01g015470 vs. ExPASy Swiss-Prot
Match: Q9LEU4 (Probable CCR4-associated factor 1 homolog 10 OS=Arabidopsis thaliana OX=3702 GN=CAF1-10 PE=2 SV=1)

HSP 1 Score: 439.1 bits (1128), Expect = 3.6e-122
Identity = 204/268 (76.12%), Postives = 236/268 (88.06%), Query Frame = 0


Query: 6   KGESIHIREVWNHNLEEEFALIREIVDQFNYIAMDTEFPGVVVRPVGPFKNINEYNYQTL 65
           K +SI IREVW++NL EEFALIREIVD+F+YIAMDTEFPGVV++PV  FK  N+ NY+TL
Sbjct: 6   KEDSIMIREVWDYNLVEEFALIREIVDKFSYIAMDTEFPGVVLKPVATFKYNNDLNYRTL 65

Query: 66  KDNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNISEDIFATDSIELLRQCG 125
           K+NVD LKLIQ+GLTFSDENGNLPTCGTDKFCIWQFNFREFNI EDI+A++SIELLRQCG
Sbjct: 66  KENVDLLKLIQVGLTFSDENGNLPTCGTDKFCIWQFNFREFNIGEDIYASESIELLRQCG 125

Query: 126 IDFKKNNEEGIDVNRFGELLMSSGIVLNDSVNWVTFHSGYDFGYLLKLLTCRSLPGTQAG 185
           IDFKKN E+GIDV RFGEL+MSSGIVLND+++WVTFH GYDFGYL+KLLTC+ LP  QA 
Sbjct: 126 IDFKKNIEKGIDVVRFGELMMSSGIVLNDAISWVTFHGGYDFGYLVKLLTCKELPLKQAD 185

Query: 186 FFDLINMYFPMVYDIKHLMKFCNSFHGGLNKLAELLDVERIGVCHQAGSDSLLTACTFRK 245
           FF L+ +YFP VYDIKHLM FCN   GGLN+LAEL+ VER+G+CHQAGSDSLLT  +FRK
Sbjct: 186 FFKLLYVYFPTVYDIKHLMTFCNGLFGGLNRLAELMGVERVGICHQAGSDSLLTLGSFRK 245

Query: 246 LRDTFFNGSTQKYAGVLYGLGVESGQTT 274
           L++ +F GST+KY GVLYGLGVE G TT
Sbjct: 246 LKERYFPGSTEKYTGVLYGLGVEDGTTT 273

[Close]

BLAST of Lcy01g015470 vs. ExPASy Swiss-Prot
Match: Q9SAI2 (Probable CCR4-associated factor 1 homolog 6 OS=Arabidopsis thaliana OX=3702 GN=CAF1-6 PE=1 SV=1)

HSP 1 Score: 435.6 bits (1119), Expect = 4.0e-121
Identity = 200/271 (73.80%), Postives = 234/271 (86.35%), Query Frame = 0


Query: 1   MSILPKGESIHIREVWNHNLEEEFALIREIVDQFNYIAMDTEFPGVVVRPVGPFKNINEY 60
           MS+  K +SI IREVWN NL+EE  LIR++VD F Y+AMDTEFPG+VVRPVG FK+  +Y
Sbjct: 1   MSLFLKDDSIQIREVWNDNLQEEMDLIRDVVDDFPYVAMDTEFPGIVVRPVGTFKSNADY 60

Query: 61  NYQTLKDNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNISEDIFATDSIEL 120
           +Y+TLK NV+ LK+IQLGLTFS+E GNLPTCGTDK+CIWQFNFREF++  DIFA DSIEL
Sbjct: 61  HYETLKTNVNILKMIQLGLTFSNEQGNLPTCGTDKYCIWQFNFREFDLDSDIFALDSIEL 120

Query: 121 LRQCGIDFKKNNEEGIDVNRFGELLMSSGIVLNDSVNWVTFHSGYDFGYLLKLLTCRSLP 180
           L+Q GID  KN  +GID  RF ELLMSSGIVLN++V+WVTFHSGYDFGYLLKLLTC++LP
Sbjct: 121 LKQSGIDLAKNTLDGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNLP 180

Query: 181 GTQAGFFDLINMYFPMVYDIKHLMKFCNSFHGGLNKLAELLDVERIGVCHQAGSDSLLTA 240
            +Q  FF LIN+YFP VYDIKHLMKFCNS HGGLNKLAELL+VER+G+CHQAGSDSLLT+
Sbjct: 181 DSQTDFFKLINVYFPTVYDIKHLMKFCNSLHGGLNKLAELLEVERVGICHQAGSDSLLTS 240

Query: 241 CTFRKLRDTFFNGSTQKYAGVLYGLGVESGQ 272
           CTFRKL++ FF G   KY+GVLYGLGVE+GQ
Sbjct: 241 CTFRKLKENFFVGPLHKYSGVLYGLGVENGQ 271

[Close]

BLAST of Lcy01g015470 vs. ExPASy Swiss-Prot
Match: Q9S9P2 (Probable CCR4-associated factor 1 homolog 2 OS=Arabidopsis thaliana OX=3702 GN=CAF1-2 PE=1 SV=1)

HSP 1 Score: 354.4 bits (908), Expect = 1.2e-96
Identity = 166/264 (62.88%), Postives = 203/264 (76.89%), Query Frame = 0


Query: 8   ESIHIREVWNHNLEEEFALIREIVDQFNYIAMDTEFPGVVVRPV------GPFKNINEYN 67
           ++I IREVWNHNLE+E ALI + +D F Y+AMDTEFPG+V + V       P+    EYN
Sbjct: 12  DTIEIREVWNHNLEQEMALIEQSIDDFPYVAMDTEFPGIVCKTVTANPNPNPYSIHYEYN 71

Query: 68  YQTLKDNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNISEDIFATDSIELL 127
           Y TLK NV+ LKLIQLGLT SDE GNLPTCGT+K CIWQFNFREFN+  D+FA DSIELL
Sbjct: 72  YDTLKANVNMLKLIQLGLTLSDEKGNLPTCGTNKQCIWQFNFREFNVISDMFALDSIELL 131

Query: 128 RQCGIDFKKNNEEGIDVNRFGELLMSSGIVLNDSVNWVTFHSGYDFGYLLKLLTCRSLPG 187
           R+  ID +KNNE G+D  RF ELLM SG+VLND ++WVTFH GYDFGYLLKLL+ + LP 
Sbjct: 132 RKSAIDLEKNNECGVDAKRFAELLMGSGVVLNDKIHWVTFHCGYDFGYLLKLLSGKELPE 191

Query: 188 TQAGFFDLINMYFPMVYDIKHLMKFCNSFHGGLNKLAELLDVERIGVCHQAGSDSLLTAC 247
             + FFD +  +FP+VYDIK+LM FC + +GGL K+AELL V+R+G+ HQAGSDSLLT  
Sbjct: 192 EISDFFDQMEKFFPVVYDIKYLMGFCTNLYGGLEKIAELLGVKRVGISHQAGSDSLLTLR 251

Query: 248 TFRKLRDTFFNGSTQKYAGVLYGL 266
           TF K+++ FF GS  KY+G L+GL
Sbjct: 252 TFIKMKEFFFTGSLLKYSGFLFGL 275

[Close]

BLAST of Lcy01g015470 vs. ExPASy Swiss-Prot
Match: Q3ZC01 (CCR4-NOT transcription complex subunit 7 OS=Bos taurus OX=9913 GN=CNOT7 PE=2 SV=1)

HSP 1 Score: 297.0 bits (759), Expect = 2.2e-79
Identity = 145/268 (54.10%), Postives = 191/268 (71.27%), Query Frame = 0


Query: 9   SIHIREVWNHNLEEEFALIREIVDQFNYIAMDTEFPGVVVRPVGPFKNINEYNYQTLKDN 68
           S  I EVW  NL+EE   IR+++ ++NY+AMDTEFPGVV RP+G F++  +Y YQ L+ N
Sbjct: 9   SQRICEVWACNLDEEMKKIRQVIRKYNYVAMDTEFPGVVARPIGEFRSNADYQYQLLRCN 68

Query: 69  VDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNISEDIFATDSIELLRQCGIDF 128
           VD LK+IQLGLTF +E G  P  GT     WQFNF+ FN++ED++A DSIELL   GI F
Sbjct: 69  VDLLKIIQLGLTFMNEQGEYPP-GTS---TWQFNFK-FNLTEDMYAQDSIELLTTSGIQF 128

Query: 129 KKNNEEGIDVNRFGELLMSSGIVLNDSVNWVTFHSGYDFGYLLKLLTCRSLPGTQAGFFD 188
           KK+ EEGI+   F ELLM+SG+VL + V W++FHSGYDFGYL+K+LT  +LP  +  FF+
Sbjct: 129 KKHEEEGIETQYFAELLMTSGVVLCEGVKWLSFHSGYDFGYLIKILTNSNLPEEELDFFE 188

Query: 189 LINMYFPMVYDIKHLMKFCNSFHGGLNKLAELLDVERIGVCHQAGSDSLLTACTFRKLRD 248
           ++ ++FP++YD+K+LMK C +  GGL ++AE L++ERIG  HQAGSDSLLT   F K+R+
Sbjct: 189 ILRLFFPVIYDVKYLMKSCKNLKGGLQEVAEQLELERIGPQHQAGSDSLLTGMAFFKMRE 248

Query: 249 TFFNG--STQKYAGVLYGLGVESGQTTN 275
            FF       KY G LYGLG  S    N
Sbjct: 249 MFFEDHIDDAKYCGHLYGLGSGSSYVQN 271

[Close]

BLAST of Lcy01g015470 vs. ExPASy TrEMBL
Match: A0A6J1KLE0 (Poly(A)-specific ribonuclease OS=Cucurbita maxima OX=3661 GN=LOC111496296 PE=3 SV=1)

HSP 1 Score: 553.1 bits (1424), Expect = 6.4e-154
Identity = 261/274 (95.26%), Postives = 269/274 (98.18%), Query Frame = 0


Query: 1   MSILPKGESIHIREVWNHNLEEEFALIREIVDQFNYIAMDTEFPGVVVRPVGPFKNINEY 60
           MSILPKGESIHIREVWNHN+EEEFAL+REIVDQFNYIAMDTEFPGVVVRPVG FKNIN+Y
Sbjct: 1   MSILPKGESIHIREVWNHNVEEEFALMREIVDQFNYIAMDTEFPGVVVRPVGAFKNINDY 60

Query: 61  NYQTLKDNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNISEDIFATDSIEL 120
           NYQTLKDNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNIS DIFA+DSIEL
Sbjct: 61  NYQTLKDNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNISNDIFASDSIEL 120

Query: 121 LRQCGIDFKKNNEEGIDVNRFGELLMSSGIVLNDSVNWVTFHSGYDFGYLLKLLTCRSLP 180
           LRQCGIDF+KNNEEGIDVN FGELLMSSGIVLND+V WVTFHSGYDFGYLLKLLTCRSLP
Sbjct: 121 LRQCGIDFQKNNEEGIDVNHFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLP 180

Query: 181 GTQAGFFDLINMYFPMVYDIKHLMKFCNSFHGGLNKLAELLDVERIGVCHQAGSDSLLTA 240
           GTQA FFDLINMYFPMVYDIKHLMKFCNSFHGGLNKLAELL+VERIGVCHQAGSDSLLTA
Sbjct: 181 GTQAAFFDLINMYFPMVYDIKHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240

Query: 241 CTFRKLRDTFFNGSTQKYAGVLYGLGVESGQTTN 275
           CTFRKLRDTFFNGSTQKYAGVLYGLGVE+GQTTN
Sbjct: 241 CTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN 274

[Close]

BLAST of Lcy01g015470 vs. ExPASy TrEMBL
Match: A0A6J1GJJ8 (Poly(A)-specific ribonuclease OS=Cucurbita moschata OX=3662 GN=LOC111454439 PE=3 SV=1)

HSP 1 Score: 553.1 bits (1424), Expect = 6.4e-154
Identity = 261/274 (95.26%), Postives = 269/274 (98.18%), Query Frame = 0


Query: 1   MSILPKGESIHIREVWNHNLEEEFALIREIVDQFNYIAMDTEFPGVVVRPVGPFKNINEY 60
           MSILPKGESIHIREVWNHN+EEEFAL+REIVDQFNYIAMDTEFPGVVVRPVG FKNIN+Y
Sbjct: 1   MSILPKGESIHIREVWNHNVEEEFALMREIVDQFNYIAMDTEFPGVVVRPVGAFKNINDY 60

Query: 61  NYQTLKDNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNISEDIFATDSIEL 120
           NYQTLKDNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNIS DIFA+DSIEL
Sbjct: 61  NYQTLKDNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNISNDIFASDSIEL 120

Query: 121 LRQCGIDFKKNNEEGIDVNRFGELLMSSGIVLNDSVNWVTFHSGYDFGYLLKLLTCRSLP 180
           LRQCGIDF+KNNEEGIDVN FGELLMSSGIVLND+V WVTFHSGYDFGYLLKLLTCRSLP
Sbjct: 121 LRQCGIDFQKNNEEGIDVNHFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLP 180

Query: 181 GTQAGFFDLINMYFPMVYDIKHLMKFCNSFHGGLNKLAELLDVERIGVCHQAGSDSLLTA 240
           GTQA FFDLINMYFPMVYDIKHLMKFCNSFHGGLNKLAELL+VERIGVCHQAGSDSLLTA
Sbjct: 181 GTQAAFFDLINMYFPMVYDIKHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240

Query: 241 CTFRKLRDTFFNGSTQKYAGVLYGLGVESGQTTN 275
           CTFRKLRDTFFNGSTQKYAGVLYGLGVE+GQTTN
Sbjct: 241 CTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN 274

[Close]

BLAST of Lcy01g015470 vs. ExPASy TrEMBL
Match: A0A6J1BRI8 (Poly(A)-specific ribonuclease OS=Momordica charantia OX=3673 GN=LOC111005098 PE=3 SV=1)

HSP 1 Score: 552.4 bits (1422), Expect = 1.1e-153
Identity = 261/274 (95.26%), Postives = 269/274 (98.18%), Query Frame = 0


Query: 1   MSILPKGESIHIREVWNHNLEEEFALIREIVDQFNYIAMDTEFPGVVVRPVGPFKNINEY 60
           MSILPKGESIHIREVW+HNLEEEFAL+REIVDQFNYIAMDTEFPGVV+RPVG FKNINEY
Sbjct: 1   MSILPKGESIHIREVWDHNLEEEFALLREIVDQFNYIAMDTEFPGVVLRPVGAFKNINEY 60

Query: 61  NYQTLKDNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNISEDIFATDSIEL 120
           NYQTLKDNVD LKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNISEDIFA+DSIEL
Sbjct: 61  NYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNISEDIFASDSIEL 120

Query: 121 LRQCGIDFKKNNEEGIDVNRFGELLMSSGIVLNDSVNWVTFHSGYDFGYLLKLLTCRSLP 180
           LRQCGIDFKKNNEEGIDVNRF ELLMSSGIVLND+VNWVTFHSGYDFGYLLKLLTCRSLP
Sbjct: 121 LRQCGIDFKKNNEEGIDVNRFAELLMSSGIVLNDTVNWVTFHSGYDFGYLLKLLTCRSLP 180

Query: 181 GTQAGFFDLINMYFPMVYDIKHLMKFCNSFHGGLNKLAELLDVERIGVCHQAGSDSLLTA 240
            TQAGFFDLINMYFPMVYDIKHLMKFCNSFHGGLNKLAELL+VERIGVCHQAGSDSLLTA
Sbjct: 181 DTQAGFFDLINMYFPMVYDIKHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240

Query: 241 CTFRKLRDTFFNGSTQKYAGVLYGLGVESGQTTN 275
           CTFRKLRDTFFNGSTQKYAGVLYGLGVE+GQ+ N
Sbjct: 241 CTFRKLRDTFFNGSTQKYAGVLYGLGVENGQSIN 274

[Close]

BLAST of Lcy01g015470 vs. ExPASy TrEMBL
Match: A0A6J1BVW9 (Poly(A)-specific ribonuclease OS=Momordica charantia OX=3673 GN=LOC111005192 PE=3 SV=1)

HSP 1 Score: 542.3 bits (1396), Expect = 1.1e-150
Identity = 255/274 (93.07%), Postives = 266/274 (97.08%), Query Frame = 0


Query: 1   MSILPKGESIHIREVWNHNLEEEFALIREIVDQFNYIAMDTEFPGVVVRPVGPFKNINEY 60
           MSILPKG+SI IREVWN NLEEEFALIREIVD+FNYIAMDTEFPGVV+RPVG FKNIN+Y
Sbjct: 1   MSILPKGDSIQIREVWNDNLEEEFALIREIVDEFNYIAMDTEFPGVVLRPVGAFKNINDY 60

Query: 61  NYQTLKDNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNISEDIFATDSIEL 120
           NYQTLKDNVD LKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFN+SEDIFA+DSIEL
Sbjct: 61  NYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNVSEDIFASDSIEL 120

Query: 121 LRQCGIDFKKNNEEGIDVNRFGELLMSSGIVLNDSVNWVTFHSGYDFGYLLKLLTCRSLP 180
           LRQCGIDFKKNNEEGIDVNRFGELLMSSG+VLND VNWVTFHSGYDFGYLLKLLTCR+LP
Sbjct: 121 LRQCGIDFKKNNEEGIDVNRFGELLMSSGVVLNDGVNWVTFHSGYDFGYLLKLLTCRTLP 180

Query: 181 GTQAGFFDLINMYFPMVYDIKHLMKFCNSFHGGLNKLAELLDVERIGVCHQAGSDSLLTA 240
            TQAGFFDLIN+YFPMVYDIKHLMKFCNS HGGLNKLAELL+VERIGVCHQAGSDSLLTA
Sbjct: 181 DTQAGFFDLINIYFPMVYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240

Query: 241 CTFRKLRDTFFNGSTQKYAGVLYGLGVESGQTTN 275
           CTFRKLRDTFFNGST+KYAGVLYGLGVESGQ TN
Sbjct: 241 CTFRKLRDTFFNGSTKKYAGVLYGLGVESGQRTN 274

[Close]

BLAST of Lcy01g015470 vs. ExPASy TrEMBL
Match: B9RNX3 (Poly(A)-specific ribonuclease OS=Ricinus communis OX=3988 GN=RCOM_0921770 PE=3 SV=1)

HSP 1 Score: 533.9 bits (1374), Expect = 4.0e-148
Identity = 248/273 (90.84%), Postives = 263/273 (96.34%), Query Frame = 0


Query: 1   MSILPKGESIHIREVWNHNLEEEFALIREIVDQFNYIAMDTEFPGVVVRPVGPFKNINEY 60
           MSI+PKG+SIHIREVWN NLEEEF LIREIVDQFNY+AMDTEFPGVV+RPVG FKNIN+Y
Sbjct: 1   MSIIPKGDSIHIREVWNDNLEEEFTLIREIVDQFNYVAMDTEFPGVVLRPVGNFKNINDY 60

Query: 61  NYQTLKDNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNISEDIFATDSIEL 120
           NYQTLKDNVD LKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNISEDIFA+DSIEL
Sbjct: 61  NYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNISEDIFASDSIEL 120

Query: 121 LRQCGIDFKKNNEEGIDVNRFGELLMSSGIVLNDSVNWVTFHSGYDFGYLLKLLTCRSLP 180
           LRQCGIDFKKNNE+GIDVNRFGEL+MSSGIVLND V+WVTFHSGYDFGYLLKLLTCRSLP
Sbjct: 121 LRQCGIDFKKNNEKGIDVNRFGELMMSSGIVLNDGVHWVTFHSGYDFGYLLKLLTCRSLP 180

Query: 181 GTQAGFFDLINMYFPMVYDIKHLMKFCNSFHGGLNKLAELLDVERIGVCHQAGSDSLLTA 240
            TQAGFFDLIN YFPMVYDIKHLMKFCNS HGGLNKLAELL+VER+G+CHQAGSDSLLT+
Sbjct: 181 DTQAGFFDLINTYFPMVYDIKHLMKFCNSLHGGLNKLAELLEVERVGICHQAGSDSLLTS 240

Query: 241 CTFRKLRDTFFNGSTQKYAGVLYGLGVESGQTT 274
           CTFRKLRD FFNGST+KYAGVLYGLGVE+GQ T
Sbjct: 241 CTFRKLRDNFFNGSTEKYAGVLYGLGVENGQNT 273

[Close]

BLAST of Lcy01g015470 vs. NCBI nr
Match: XP_022951690.1 (probable CCR4-associated factor 1 homolog 7 [Cucurbita moschata] >XP_023002466.1 probable CCR4-associated factor 1 homolog 7 [Cucurbita maxima] >KAG6585496.1 putative CCR4-associated factor 1-like 7, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 553.1 bits (1424), Expect = 1.3e-153
Identity = 261/274 (95.26%), Postives = 269/274 (98.18%), Query Frame = 0


Query: 1   MSILPKGESIHIREVWNHNLEEEFALIREIVDQFNYIAMDTEFPGVVVRPVGPFKNINEY 60
           MSILPKGESIHIREVWNHN+EEEFAL+REIVDQFNYIAMDTEFPGVVVRPVG FKNIN+Y
Sbjct: 1   MSILPKGESIHIREVWNHNVEEEFALMREIVDQFNYIAMDTEFPGVVVRPVGAFKNINDY 60

Query: 61  NYQTLKDNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNISEDIFATDSIEL 120
           NYQTLKDNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNIS DIFA+DSIEL
Sbjct: 61  NYQTLKDNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNISNDIFASDSIEL 120

Query: 121 LRQCGIDFKKNNEEGIDVNRFGELLMSSGIVLNDSVNWVTFHSGYDFGYLLKLLTCRSLP 180
           LRQCGIDF+KNNEEGIDVN FGELLMSSGIVLND+V WVTFHSGYDFGYLLKLLTCRSLP
Sbjct: 121 LRQCGIDFQKNNEEGIDVNHFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLP 180

Query: 181 GTQAGFFDLINMYFPMVYDIKHLMKFCNSFHGGLNKLAELLDVERIGVCHQAGSDSLLTA 240
           GTQA FFDLINMYFPMVYDIKHLMKFCNSFHGGLNKLAELL+VERIGVCHQAGSDSLLTA
Sbjct: 181 GTQAAFFDLINMYFPMVYDIKHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240

Query: 241 CTFRKLRDTFFNGSTQKYAGVLYGLGVESGQTTN 275
           CTFRKLRDTFFNGSTQKYAGVLYGLGVE+GQTTN
Sbjct: 241 CTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN 274

[Close]

BLAST of Lcy01g015470 vs. NCBI nr
Match: KAG7020412.1 (putative CCR4-associated factor 1-like 7, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 553.1 bits (1424), Expect = 1.3e-153
Identity = 261/274 (95.26%), Postives = 269/274 (98.18%), Query Frame = 0


Query: 1   MSILPKGESIHIREVWNHNLEEEFALIREIVDQFNYIAMDTEFPGVVVRPVGPFKNINEY 60
           MSILPKGESIHIREVWNHN+EEEFAL+REIVDQFNYIAMDTEFPGVVVRPVG FKNIN+Y
Sbjct: 261 MSILPKGESIHIREVWNHNVEEEFALMREIVDQFNYIAMDTEFPGVVVRPVGAFKNINDY 320

Query: 61  NYQTLKDNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNISEDIFATDSIEL 120
           NYQTLKDNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNIS DIFA+DSIEL
Sbjct: 321 NYQTLKDNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNISNDIFASDSIEL 380

Query: 121 LRQCGIDFKKNNEEGIDVNRFGELLMSSGIVLNDSVNWVTFHSGYDFGYLLKLLTCRSLP 180
           LRQCGIDF+KNNEEGIDVN FGELLMSSGIVLND+V WVTFHSGYDFGYLLKLLTCRSLP
Sbjct: 381 LRQCGIDFQKNNEEGIDVNHFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLP 440

Query: 181 GTQAGFFDLINMYFPMVYDIKHLMKFCNSFHGGLNKLAELLDVERIGVCHQAGSDSLLTA 240
           GTQA FFDLINMYFPMVYDIKHLMKFCNSFHGGLNKLAELL+VERIGVCHQAGSDSLLTA
Sbjct: 441 GTQAAFFDLINMYFPMVYDIKHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTA 500

Query: 241 CTFRKLRDTFFNGSTQKYAGVLYGLGVESGQTTN 275
           CTFRKLRDTFFNGSTQKYAGVLYGLGVE+GQTTN
Sbjct: 501 CTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN 534

[Close]

BLAST of Lcy01g015470 vs. NCBI nr
Match: XP_022132176.1 (probable CCR4-associated factor 1 homolog 7 [Momordica charantia])

HSP 1 Score: 552.4 bits (1422), Expect = 2.2e-153
Identity = 261/274 (95.26%), Postives = 269/274 (98.18%), Query Frame = 0


Query: 1   MSILPKGESIHIREVWNHNLEEEFALIREIVDQFNYIAMDTEFPGVVVRPVGPFKNINEY 60
           MSILPKGESIHIREVW+HNLEEEFAL+REIVDQFNYIAMDTEFPGVV+RPVG FKNINEY
Sbjct: 1   MSILPKGESIHIREVWDHNLEEEFALLREIVDQFNYIAMDTEFPGVVLRPVGAFKNINEY 60

Query: 61  NYQTLKDNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNISEDIFATDSIEL 120
           NYQTLKDNVD LKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNISEDIFA+DSIEL
Sbjct: 61  NYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNISEDIFASDSIEL 120

Query: 121 LRQCGIDFKKNNEEGIDVNRFGELLMSSGIVLNDSVNWVTFHSGYDFGYLLKLLTCRSLP 180
           LRQCGIDFKKNNEEGIDVNRF ELLMSSGIVLND+VNWVTFHSGYDFGYLLKLLTCRSLP
Sbjct: 121 LRQCGIDFKKNNEEGIDVNRFAELLMSSGIVLNDTVNWVTFHSGYDFGYLLKLLTCRSLP 180

Query: 181 GTQAGFFDLINMYFPMVYDIKHLMKFCNSFHGGLNKLAELLDVERIGVCHQAGSDSLLTA 240
            TQAGFFDLINMYFPMVYDIKHLMKFCNSFHGGLNKLAELL+VERIGVCHQAGSDSLLTA
Sbjct: 181 DTQAGFFDLINMYFPMVYDIKHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240

Query: 241 CTFRKLRDTFFNGSTQKYAGVLYGLGVESGQTTN 275
           CTFRKLRDTFFNGSTQKYAGVLYGLGVE+GQ+ N
Sbjct: 241 CTFRKLRDTFFNGSTQKYAGVLYGLGVENGQSIN 274

[Close]

BLAST of Lcy01g015470 vs. NCBI nr
Match: XP_023538244.1 (probable CCR4-associated factor 1 homolog 7 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 551.6 bits (1420), Expect = 3.8e-153
Identity = 260/274 (94.89%), Postives = 269/274 (98.18%), Query Frame = 0


Query: 1   MSILPKGESIHIREVWNHNLEEEFALIREIVDQFNYIAMDTEFPGVVVRPVGPFKNINEY 60
           MSILPKGESIHIREVWNHN+EEEFAL+REIVD+FNYIAMDTEFPGVVVRPVG FKNIN+Y
Sbjct: 1   MSILPKGESIHIREVWNHNVEEEFALMREIVDKFNYIAMDTEFPGVVVRPVGAFKNINDY 60

Query: 61  NYQTLKDNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNISEDIFATDSIEL 120
           NYQTLKDNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNIS DIFA+DSIEL
Sbjct: 61  NYQTLKDNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNISNDIFASDSIEL 120

Query: 121 LRQCGIDFKKNNEEGIDVNRFGELLMSSGIVLNDSVNWVTFHSGYDFGYLLKLLTCRSLP 180
           LRQCGIDF+KNNEEGIDVN FGELLMSSGIVLND+V WVTFHSGYDFGYLLKLLTCRSLP
Sbjct: 121 LRQCGIDFQKNNEEGIDVNHFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLP 180

Query: 181 GTQAGFFDLINMYFPMVYDIKHLMKFCNSFHGGLNKLAELLDVERIGVCHQAGSDSLLTA 240
           GTQA FFDLINMYFPMVYDIKHLMKFCNSFHGGLNKLAELL+VERIGVCHQAGSDSLLTA
Sbjct: 181 GTQAAFFDLINMYFPMVYDIKHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240

Query: 241 CTFRKLRDTFFNGSTQKYAGVLYGLGVESGQTTN 275
           CTFRKLRDTFFNGSTQKYAGVLYGLGVE+GQTTN
Sbjct: 241 CTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN 274

[Close]

BLAST of Lcy01g015470 vs. NCBI nr
Match: XP_022132308.1 (probable CCR4-associated factor 1 homolog 7 [Momordica charantia])

HSP 1 Score: 542.3 bits (1396), Expect = 2.3e-150
Identity = 255/274 (93.07%), Postives = 266/274 (97.08%), Query Frame = 0


Query: 1   MSILPKGESIHIREVWNHNLEEEFALIREIVDQFNYIAMDTEFPGVVVRPVGPFKNINEY 60
           MSILPKG+SI IREVWN NLEEEFALIREIVD+FNYIAMDTEFPGVV+RPVG FKNIN+Y
Sbjct: 1   MSILPKGDSIQIREVWNDNLEEEFALIREIVDEFNYIAMDTEFPGVVLRPVGAFKNINDY 60

Query: 61  NYQTLKDNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNISEDIFATDSIEL 120
           NYQTLKDNVD LKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFN+SEDIFA+DSIEL
Sbjct: 61  NYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNVSEDIFASDSIEL 120

Query: 121 LRQCGIDFKKNNEEGIDVNRFGELLMSSGIVLNDSVNWVTFHSGYDFGYLLKLLTCRSLP 180
           LRQCGIDFKKNNEEGIDVNRFGELLMSSG+VLND VNWVTFHSGYDFGYLLKLLTCR+LP
Sbjct: 121 LRQCGIDFKKNNEEGIDVNRFGELLMSSGVVLNDGVNWVTFHSGYDFGYLLKLLTCRTLP 180

Query: 181 GTQAGFFDLINMYFPMVYDIKHLMKFCNSFHGGLNKLAELLDVERIGVCHQAGSDSLLTA 240
            TQAGFFDLIN+YFPMVYDIKHLMKFCNS HGGLNKLAELL+VERIGVCHQAGSDSLLTA
Sbjct: 181 DTQAGFFDLINIYFPMVYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240

Query: 241 CTFRKLRDTFFNGSTQKYAGVLYGLGVESGQTTN 275
           CTFRKLRDTFFNGST+KYAGVLYGLGVESGQ TN
Sbjct: 241 CTFRKLRDTFFNGSTKKYAGVLYGLGVESGQRTN 274

[Close]

BLAST of Lcy01g015470 vs. TAIR 10
Match: AT2G32070.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 447.6 bits (1150), Expect = 7.3e-126
Identity = 208/272 (76.47%), Postives = 239/272 (87.87%), Query Frame = 0


Query: 1   MSILPKGESIHIREVWNHNLEEEFALIREIVDQFNYIAMDTEFPGVVVRPVGPFKNINEY 60
           MS+  K +SI IREVWN NLE E ALIRE+VD F ++AMDTEFPG+V RPVG FK   EY
Sbjct: 1   MSLFLKDDSIQIREVWNDNLESEMALIREVVDDFPFVAMDTEFPGIVCRPVGTFKTNTEY 60

Query: 61  NYQTLKDNVDTLKLIQLGLTFSDENGNLPTCGTD-KFCIWQFNFREFNISEDIFATDSIE 120
           +Y+TLK NV+ LK+IQLGLTFSDE GNLPTCGTD K+CIWQFNFREF++  DI+ATDSIE
Sbjct: 61  HYETLKTNVNILKMIQLGLTFSDEKGNLPTCGTDNKYCIWQFNFREFDLESDIYATDSIE 120

Query: 121 LLRQCGIDFKKNNEEGIDVNRFGELLMSSGIVLNDSVNWVTFHSGYDFGYLLKLLTCRSL 180
           LLRQ GIDF KNNE GID  RF ELLMSSGIVLN++V+WVTFHSGYDFGYLLKLLTC++L
Sbjct: 121 LLRQSGIDFVKNNEFGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNL 180

Query: 181 PGTQAGFFDLINMYFPMVYDIKHLMKFCNSFHGGLNKLAELLDVERIGVCHQAGSDSLLT 240
           P TQ GFF++I++YFP VYDIKHLMKFCNS HGGLNKLAELLDVER+G+CHQAGSDSLLT
Sbjct: 181 PETQTGFFEMISVYFPRVYDIKHLMKFCNSLHGGLNKLAELLDVERVGICHQAGSDSLLT 240

Query: 241 ACTFRKLRDTFFNGSTQKYAGVLYGLGVESGQ 272
           +CTFRKL++ FF GS +KY+GVLYGLGVE+GQ
Sbjct: 241 SCTFRKLQENFFIGSMEKYSGVLYGLGVENGQ 272

[Close]

BLAST of Lcy01g015470 vs. TAIR 10
Match: AT5G10960.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 439.1 bits (1128), Expect = 2.6e-123
Identity = 204/268 (76.12%), Postives = 236/268 (88.06%), Query Frame = 0


Query: 6   KGESIHIREVWNHNLEEEFALIREIVDQFNYIAMDTEFPGVVVRPVGPFKNINEYNYQTL 65
           K +SI IREVW++NL EEFALIREIVD+F+YIAMDTEFPGVV++PV  FK  N+ NY+TL
Sbjct: 6   KEDSIMIREVWDYNLVEEFALIREIVDKFSYIAMDTEFPGVVLKPVATFKYNNDLNYRTL 65

Query: 66  KDNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNISEDIFATDSIELLRQCG 125
           K+NVD LKLIQ+GLTFSDENGNLPTCGTDKFCIWQFNFREFNI EDI+A++SIELLRQCG
Sbjct: 66  KENVDLLKLIQVGLTFSDENGNLPTCGTDKFCIWQFNFREFNIGEDIYASESIELLRQCG 125

Query: 126 IDFKKNNEEGIDVNRFGELLMSSGIVLNDSVNWVTFHSGYDFGYLLKLLTCRSLPGTQAG 185
           IDFKKN E+GIDV RFGEL+MSSGIVLND+++WVTFH GYDFGYL+KLLTC+ LP  QA 
Sbjct: 126 IDFKKNIEKGIDVVRFGELMMSSGIVLNDAISWVTFHGGYDFGYLVKLLTCKELPLKQAD 185

Query: 186 FFDLINMYFPMVYDIKHLMKFCNSFHGGLNKLAELLDVERIGVCHQAGSDSLLTACTFRK 245
           FF L+ +YFP VYDIKHLM FCN   GGLN+LAEL+ VER+G+CHQAGSDSLLT  +FRK
Sbjct: 186 FFKLLYVYFPTVYDIKHLMTFCNGLFGGLNRLAELMGVERVGICHQAGSDSLLTLGSFRK 245

Query: 246 LRDTFFNGSTQKYAGVLYGLGVESGQTT 274
           L++ +F GST+KY GVLYGLGVE G TT
Sbjct: 246 LKERYFPGSTEKYTGVLYGLGVEDGTTT 273

[Close]

BLAST of Lcy01g015470 vs. TAIR 10
Match: AT1G80780.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 435.6 bits (1119), Expect = 2.9e-122
Identity = 200/271 (73.80%), Postives = 234/271 (86.35%), Query Frame = 0


Query: 1   MSILPKGESIHIREVWNHNLEEEFALIREIVDQFNYIAMDTEFPGVVVRPVGPFKNINEY 60
           MS+  K +SI IREVWN NL+EE  LIR++VD F Y+AMDTEFPG+VVRPVG FK+  +Y
Sbjct: 1   MSLFLKDDSIQIREVWNDNLQEEMDLIRDVVDDFPYVAMDTEFPGIVVRPVGTFKSNADY 60

Query: 61  NYQTLKDNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNISEDIFATDSIEL 120
           +Y+TLK NV+ LK+IQLGLTFS+E GNLPTCGTDK+CIWQFNFREF++  DIFA DSIEL
Sbjct: 61  HYETLKTNVNILKMIQLGLTFSNEQGNLPTCGTDKYCIWQFNFREFDLDSDIFALDSIEL 120

Query: 121 LRQCGIDFKKNNEEGIDVNRFGELLMSSGIVLNDSVNWVTFHSGYDFGYLLKLLTCRSLP 180
           L+Q GID  KN  +GID  RF ELLMSSGIVLN++V+WVTFHSGYDFGYLLKLLTC++LP
Sbjct: 121 LKQSGIDLAKNTLDGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNLP 180

Query: 181 GTQAGFFDLINMYFPMVYDIKHLMKFCNSFHGGLNKLAELLDVERIGVCHQAGSDSLLTA 240
            +Q  FF LIN+YFP VYDIKHLMKFCNS HGGLNKLAELL+VER+G+CHQAGSDSLLT+
Sbjct: 181 DSQTDFFKLINVYFPTVYDIKHLMKFCNSLHGGLNKLAELLEVERVGICHQAGSDSLLTS 240

Query: 241 CTFRKLRDTFFNGSTQKYAGVLYGLGVESGQ 272
           CTFRKL++ FF G   KY+GVLYGLGVE+GQ
Sbjct: 241 CTFRKLKENFFVGPLHKYSGVLYGLGVENGQ 271

[Close]

BLAST of Lcy01g015470 vs. TAIR 10
Match: AT1G80780.2 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 435.6 bits (1119), Expect = 2.9e-122
Identity = 200/271 (73.80%), Postives = 234/271 (86.35%), Query Frame = 0


Query: 1   MSILPKGESIHIREVWNHNLEEEFALIREIVDQFNYIAMDTEFPGVVVRPVGPFKNINEY 60
           MS+  K +SI IREVWN NL+EE  LIR++VD F Y+AMDTEFPG+VVRPVG FK+  +Y
Sbjct: 1   MSLFLKDDSIQIREVWNDNLQEEMDLIRDVVDDFPYVAMDTEFPGIVVRPVGTFKSNADY 60

Query: 61  NYQTLKDNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNISEDIFATDSIEL 120
           +Y+TLK NV+ LK+IQLGLTFS+E GNLPTCGTDK+CIWQFNFREF++  DIFA DSIEL
Sbjct: 61  HYETLKTNVNILKMIQLGLTFSNEQGNLPTCGTDKYCIWQFNFREFDLDSDIFALDSIEL 120

Query: 121 LRQCGIDFKKNNEEGIDVNRFGELLMSSGIVLNDSVNWVTFHSGYDFGYLLKLLTCRSLP 180
           L+Q GID  KN  +GID  RF ELLMSSGIVLN++V+WVTFHSGYDFGYLLKLLTC++LP
Sbjct: 121 LKQSGIDLAKNTLDGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNLP 180

Query: 181 GTQAGFFDLINMYFPMVYDIKHLMKFCNSFHGGLNKLAELLDVERIGVCHQAGSDSLLTA 240
            +Q  FF LIN+YFP VYDIKHLMKFCNS HGGLNKLAELL+VER+G+CHQAGSDSLLT+
Sbjct: 181 DSQTDFFKLINVYFPTVYDIKHLMKFCNSLHGGLNKLAELLEVERVGICHQAGSDSLLTS 240

Query: 241 CTFRKLRDTFFNGSTQKYAGVLYGLGVESGQ 272
           CTFRKL++ FF G   KY+GVLYGLGVE+GQ
Sbjct: 241 CTFRKLKENFFVGPLHKYSGVLYGLGVENGQ 271

[Close]

BLAST of Lcy01g015470 vs. TAIR 10
Match: AT1G80780.3 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 431.8 bits (1109), Expect = 4.1e-121
Identity = 198/269 (73.61%), Postives = 232/269 (86.25%), Query Frame = 0


Query: 1   MSILPKGESIHIREVWNHNLEEEFALIREIVDQFNYIAMDTEFPGVVVRPVGPFKNINEY 60
           MS+  K +SI IREVWN NL+EE  LIR++VD F Y+AMDTEFPG+VVRPVG FK+  +Y
Sbjct: 1   MSLFLKDDSIQIREVWNDNLQEEMDLIRDVVDDFPYVAMDTEFPGIVVRPVGTFKSNADY 60

Query: 61  NYQTLKDNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNISEDIFATDSIEL 120
           +Y+TLK NV+ LK+IQLGLTFS+E GNLPTCGTDK+CIWQFNFREF++  DIFA DSIEL
Sbjct: 61  HYETLKTNVNILKMIQLGLTFSNEQGNLPTCGTDKYCIWQFNFREFDLDSDIFALDSIEL 120

Query: 121 LRQCGIDFKKNNEEGIDVNRFGELLMSSGIVLNDSVNWVTFHSGYDFGYLLKLLTCRSLP 180
           L+Q GID  KN  +GID  RF ELLMSSGIVLN++V+WVTFHSGYDFGYLLKLLTC++LP
Sbjct: 121 LKQSGIDLAKNTLDGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNLP 180

Query: 181 GTQAGFFDLINMYFPMVYDIKHLMKFCNSFHGGLNKLAELLDVERIGVCHQAGSDSLLTA 240
            +Q  FF LIN+YFP VYDIKHLMKFCNS HGGLNKLAELL+VER+G+CHQAGSDSLLT+
Sbjct: 181 DSQTDFFKLINVYFPTVYDIKHLMKFCNSLHGGLNKLAELLEVERVGICHQAGSDSLLTS 240

Query: 241 CTFRKLRDTFFNGSTQKYAGVLYGLGVES 270
           CTFRKL++ FF G   KY+GVLYGLGVE+
Sbjct: 241 CTFRKLKENFFVGPLHKYSGVLYGLGVEN 269

The following BLAST results are available for this feature:

BLAST of Lcy01g015470 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SKZ2	1.0e-124	76.47	Probable CCR4-associated factor 1 homolog 7 OS=Arabidopsis thaliana OX=3702 GN=C...	[more]
Q9LEU4	3.6e-122	76.12	Probable CCR4-associated factor 1 homolog 10 OS=Arabidopsis thaliana OX=3702 GN=...	[more]
Q9SAI2	4.0e-121	73.80	Probable CCR4-associated factor 1 homolog 6 OS=Arabidopsis thaliana OX=3702 GN=C...	[more]
Q9S9P2	1.2e-96	62.88	Probable CCR4-associated factor 1 homolog 2 OS=Arabidopsis thaliana OX=3702 GN=C...	[more]
Q3ZC01	2.2e-79	54.10	CCR4-NOT transcription complex subunit 7 OS=Bos taurus OX=9913 GN=CNOT7 PE=2 SV=...	[more]

BLAST of Lcy01g015470 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KLE0	6.4e-154	95.26	Poly(A)-specific ribonuclease OS=Cucurbita maxima OX=3661 GN=LOC111496296 PE=3 S...	[more]
A0A6J1GJJ8	6.4e-154	95.26	Poly(A)-specific ribonuclease OS=Cucurbita moschata OX=3662 GN=LOC111454439 PE=3...	[more]
A0A6J1BRI8	1.1e-153	95.26	Poly(A)-specific ribonuclease OS=Momordica charantia OX=3673 GN=LOC111005098 PE=...	[more]
A0A6J1BVW9	1.1e-150	93.07	Poly(A)-specific ribonuclease OS=Momordica charantia OX=3673 GN=LOC111005192 PE=...	[more]
B9RNX3	4.0e-148	90.84	Poly(A)-specific ribonuclease OS=Ricinus communis OX=3988 GN=RCOM_0921770 PE=3 S...	[more]

BLAST of Lcy01g015470 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022951690.1	1.3e-153	95.26	probable CCR4-associated factor 1 homolog 7 [Cucurbita moschata] >XP_023002466.1...	[more]
KAG7020412.1	1.3e-153	95.26	putative CCR4-associated factor 1-like 7, partial [Cucurbita argyrosperma subsp....	[more]
XP_022132176.1	2.2e-153	95.26	probable CCR4-associated factor 1 homolog 7 [Momordica charantia]	[more]
XP_023538244.1	3.8e-153	94.89	probable CCR4-associated factor 1 homolog 7 [Cucurbita pepo subsp. pepo]	[more]
XP_022132308.1	2.3e-150	93.07	probable CCR4-associated factor 1 homolog 7 [Momordica charantia]	[more]

BLAST of Lcy01g015470 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G32070.1	7.3e-126	76.47	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT5G10960.1	2.6e-123	76.12	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT1G80780.1	2.9e-122	73.80	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT1G80780.2	2.9e-122	73.80	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT1G80780.3	4.1e-121	73.61	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006941	Ribonuclease CAF1	PFAM	PF04857	CAF1	coord: 15..136 e-value: 8.7E-13 score: 48.2
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 2..268 e-value: 6.2E-101 score: 339.1
IPR039637	CCR4-NOT transcription complex subunit 7/8/Pop2	PANTHER	PTHR10797	CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT	coord: 1..274
None	No IPR available	PANTHER	PTHR10797:SF68	CCR4-ASSOCIATED FACTOR 1 HOMOLOG 10-RELATED	coord: 1..274
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 12..265

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy01g015470.1	Lcy01g015470.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0043928	exonucleolytic catabolism of deadenylated mRNA
biological_process	GO:0090503	RNA phosphodiester bond hydrolysis, exonucleolytic
cellular_component	GO:0030015	CCR4-NOT core complex
cellular_component	GO:0005634	nucleus
cellular_component	GO:0000932	P-body
cellular_component	GO:0030014	CCR4-NOT complex
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0004535	poly(A)-specific ribonuclease activity