Lcy01g015460 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy01g015460
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	zinc finger protein 3-like
Location	Chr01: 36977812 .. 36978783 (-)
RNA-Seq Expression	Lcy01g015460
Synteny	Lcy01g015460

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCAGCTCTCATTTCATAATATAATCCTCTCCTCCTAAAAAAGTTTCAATTTTTCATCAATGGAGTCCTCATTTACCGAGACCCCTCCACCTCCAAAAACGCCGTCGCAAAACCCAGAACAGTACAAAGACGACAAATTAGAGAAGGGTTTTGCCGAGGAAGACGACGGCGACCACCATCTCCGCCGTGGGATTCCGGCGGAGGAGCTGAATCTTATTGAGGGTTTGAAAATGGGTTCGTCGGAGCCTAGGGTTTTTTCGTGTAATTTCTGTCAGAGGAAATTTTATAGCTCTCAAGCACTTGGAGGCCATCAAAATGCTCATAAAAGAGAGAGAACGTTGGCCAAAAGAGGCGGTCAACGGCTGCCGGCGTTCGGTGGCTACCACCACTATGCGGCGGCGGCGGCGGCGCAGTCTTTTCCATTTCGCGGTGGTCCCAACAGGTCGCTTGGAATTCAGGTTCACGCGATGGTCCATAAGCCGTTTCACCACGCGCCGGTTTCTTCTTCGGGGTTTGGGATCCCGTACGGCCGTTCCCACGGTTGGTCCAGAATTCCGATCCATCAACAGCCCGGGATCGGGAAGCTGCCGCTGATCAACGCTGGCCATGCGATTAATCAAACGCCTGATTTTGCGCCACGTGGCTGTAGCAGCGTAGGTAGGTTCGACTTCGACGTGGTCCGATCAACGGCGGCCGGTACGGCGGCGGCTGCCGGCGTTCTTTTCAACAATAAACAAGAGGAGACCCACAAAGTACTAGACTTGTCTCTCAAGTTGTAATTAAACACAAAATTTTCTCTCCACTTTAGAACTATAAATCTTCAAGCTTTTTCCTTTTTTTTTTTCTTTTGTTCAATGGTTCGATCTTTAAAGTTTCGATTTTGATATTGGTTTAAGTCTATATTATAGATAGTGAAGATACAATTTGCACAAATTAATGTTTGAATTGTATTCATTATATTCTTCATGTTTTT

mRNA sequence

TCAGCTCTCATTTCATAATATAATCCTCTCCTCCTAAAAAAGTTTCAATTTTTCATCAATGGAGTCCTCATTTACCGAGACCCCTCCACCTCCAAAAACGCCGTCGCAAAACCCAGAACAGTACAAAGACGACAAATTAGAGAAGGGTTTTGCCGAGGAAGACGACGGCGACCACCATCTCCGCCGTGGGATTCCGGCGGAGGAGCTGAATCTTATTGAGGGTTTGAAAATGGGTTCGTCGGAGCCTAGGGTTTTTTCGTGTAATTTCTGTCAGAGGAAATTTTATAGCTCTCAAGCACTTGGAGGCCATCAAAATGCTCATAAAAGAGAGAGAACGTTGGCCAAAAGAGGCGGTCAACGGCTGCCGGCGTTCGGTGGCTACCACCACTATGCGGCGGCGGCGGCGGCGCAGTCTTTTCCATTTCGCGGTGGTCCCAACAGGTCGCTTGGAATTCAGGTTCACGCGATGGTCCATAAGCCGTTTCACCACGCGCCGGTTTCTTCTTCGGGGTTTGGGATCCCGTACGGCCGTTCCCACGGTTGGTCCAGAATTCCGATCCATCAACAGCCCGGGATCGGGAAGCTGCCGCTGATCAACGCTGGCCATGCGATTAATCAAACGCCTGATTTTGCGCCACGTGGCTGTAGCAGCGTAGGTAGGTTCGACTTCGACGTGGTCCGATCAACGGCGGCCGGTACGGCGGCGGCTGCCGGCGTTCTTTTCAACAATAAACAAGAGGAGACCCACAAAGTACTAGACTTGTCTCTCAAGTTGTAATTAAACACAAAATTTTCTCTCCACTTTAGAACTATAAATCTTCAAGCTTTTTCCTTTTTTTTTTTCTTTTGTTCAATGGTTCGATCTTTAAAGTTTCGATTTTGATATTGGTTTAAGTCTATATTATAGATAGTGAAGATACAATTTGCACAAATTAATGTTTGAATTGTATTCATTATATTCTTCATGTTTTT

Coding sequence (CDS)

ATGGAGTCCTCATTTACCGAGACCCCTCCACCTCCAAAAACGCCGTCGCAAAACCCAGAACAGTACAAAGACGACAAATTAGAGAAGGGTTTTGCCGAGGAAGACGACGGCGACCACCATCTCCGCCGTGGGATTCCGGCGGAGGAGCTGAATCTTATTGAGGGTTTGAAAATGGGTTCGTCGGAGCCTAGGGTTTTTTCGTGTAATTTCTGTCAGAGGAAATTTTATAGCTCTCAAGCACTTGGAGGCCATCAAAATGCTCATAAAAGAGAGAGAACGTTGGCCAAAAGAGGCGGTCAACGGCTGCCGGCGTTCGGTGGCTACCACCACTATGCGGCGGCGGCGGCGGCGCAGTCTTTTCCATTTCGCGGTGGTCCCAACAGGTCGCTTGGAATTCAGGTTCACGCGATGGTCCATAAGCCGTTTCACCACGCGCCGGTTTCTTCTTCGGGGTTTGGGATCCCGTACGGCCGTTCCCACGGTTGGTCCAGAATTCCGATCCATCAACAGCCCGGGATCGGGAAGCTGCCGCTGATCAACGCTGGCCATGCGATTAATCAAACGCCTGATTTTGCGCCACGTGGCTGTAGCAGCGTAGGTAGGTTCGACTTCGACGTGGTCCGATCAACGGCGGCCGGTACGGCGGCGGCTGCCGGCGTTCTTTTCAACAATAAACAAGAGGAGACCCACAAAGTACTAGACTTGTCTCTCAAGTTGTAA

Protein sequence

MESSFTETPPPPKTPSQNPEQYKDDKLEKGFAEEDDGDHHLRRGIPAEELNLIEGLKMGSSEPRVFSCNFCQRKFYSSQALGGHQNAHKRERTLAKRGGQRLPAFGGYHHYAAAAAAQSFPFRGGPNRSLGIQVHAMVHKPFHHAPVSSSGFGIPYGRSHGWSRIPIHQQPGIGKLPLINAGHAINQTPDFAPRGCSSVGRFDFDVVRSTAAGTAAAAGVLFNNKQEETHKVLDLSLKL

Homology

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BLAST of Lcy01g015460 vs. ExPASy Swiss-Prot
Match: Q39262 (Zinc finger protein 3 OS=Arabidopsis thaliana OX=3702 GN=ZFP3 PE=1 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 1.1e-26
Identity = 92/234 (39.32%), Postives = 118/234 (50.43%), Query Frame = 0


Query: 25  DKLEKGFAEEDDGDHHLRRGIPAEELNLIEGL---------KMGSSEPRVFSCNFCQRKF 84
           D L +   +E+   H+      + ELNLI+ +            S+E ++FSCN+CQR F
Sbjct: 16  DSLNQSIEDEERDVHN-----SSHELNLIDCIDDTTSIVNESTTSTEQKLFSCNYCQRTF 75

Query: 85  YSSQALGGHQNAHKRERTLAKRGGQRLPAFGGYHHYAAAAAAQSFPFRGGPN--RSLGIQ 144
           YSSQALGGHQNAHKRERTLAKRG +   +   + H          PF G  N  RSLGIQ
Sbjct: 76  YSSQALGGHQNAHKRERTLAKRGQRMAASASAFGH---PYGFSPLPFHGQYNNHRSLGIQ 135

Query: 145 VHAMVHKPFHHAPVSSSGFGIPYGRSHGWSRIPIHQQPGIGKLP-LINAGHAINQTPDFA 204
            H++ HK       S +GFG  YG+ + WSR+P  QQP IGK P + N  H  +Q    A
Sbjct: 136 AHSISHK-----LSSYNGFGGHYGQIN-WSRLPFDQQPAIGKFPSMDNFHHHHHQMMMMA 195

Query: 205 PRGCSSVGRFDFD-----VVRS--TAAGTAAAAGVLFNNKQEETHKVLDLSLKL 240
           P   S     D       V+    T        G+L +    E  + LDLSLKL
Sbjct: 196 PSVNSRSNNIDSPSNTGRVLEGSPTLEQWHGDKGLLLSTSHHEEQQKLDLSLKL 235

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BLAST of Lcy01g015460 vs. ExPASy Swiss-Prot
Match: Q42485 (Zinc finger protein 1 OS=Arabidopsis thaliana OX=3702 GN=ZFP1 PE=2 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 1.1e-21
Identity = 71/154 (46.10%), Postives = 87/154 (56.49%), Query Frame = 0


Query: 47  AEELNLIEGLKMGSS-------------EPRVFSCNFCQRKFYSSQALGGHQNAHKRERT 106
           + ELNLI+  K  SS             +PRVFSCN+CQRKFYSSQALGGHQNAHKRERT
Sbjct: 36  SSELNLIDSFKTSSSSTSHHQHQQEQLADPRVFSCNYCQRKFYSSQALGGHQNAHKRERT 95

Query: 107 LAKRGG------QRLP--AFG-GYHHYAAAAAAQSFPFRGGPNR--SLGIQVHAMVHKPF 166
           LAKRG         LP  AF  G+   +  A+  S P  G  N   +LGIQ H+ +HKP 
Sbjct: 96  LAKRGQYYKMTLSSLPSSAFAFGHGSVSRFASMASLPLHGSVNNRSTLGIQAHSTIHKPS 155

Query: 167 HHAPVSSSGFGIPYGRSHGWSRIPIHQQPGIGKL 177
                ++S        SH + +  IHQ+P IGK+
Sbjct: 156 FLGRQTTS-------LSHVFKQ-SIHQKPTIGKM 181

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BLAST of Lcy01g015460 vs. ExPASy Swiss-Prot
Match: Q39263 (Zinc finger protein 4 OS=Arabidopsis thaliana OX=3702 GN=ZFP4 PE=2 SV=2)

HSP 1 Score: 87.0 bits (214), Expect = 3.1e-16
Identity = 51/94 (54.26%), Postives = 58/94 (61.70%), Query Frame = 0


Query: 60  SSEPRVFSCNFCQRKFYSSQALGGHQNAHKRERTLAKRGGQR-----LPAFGGYHHYAAA 119
           S   RVFSCN+CQRKFYSSQALGGHQNAHKRERTLAKR  +       P  G   +YAAA
Sbjct: 79  SVSKRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRAMRMGLAGVFPGRGSSSNYAAA 138

Query: 120 AAAQS---FPFRGGPN------RSLGIQVHAMVH 140
           A A +    P  G  N      R+LGI+ H+  H
Sbjct: 139 ATAAALSCLPLHGSGNGNMTSFRTLGIRAHSSAH 172

[Close]

BLAST of Lcy01g015460 vs. ExPASy Swiss-Prot
Match: Q39266 (Zinc finger protein 7 OS=Arabidopsis thaliana OX=3702 GN=ZFP7 PE=1 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 1.4e-13
Identity = 42/76 (55.26%), Postives = 49/76 (64.47%), Query Frame = 0


Query: 61  SEPRVFSCNFCQRKFYSSQALGGHQNAHKRERTLAKRGGQRLPAFGGYHHYAAAAAAQSF 120
           + PRVFSCN+C+RKFYSSQALGGHQNAHKRERT+AKR       FG  HH+       S 
Sbjct: 54  ANPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKRAMHMGRMFG--HHHRPYTYTSS- 113

Query: 121 PFRGGPNRSLGIQVHA 137
                   SLG+Q H+
Sbjct: 114 --------SLGMQAHS 118

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BLAST of Lcy01g015460 vs. ExPASy Swiss-Prot
Match: Q39261 (Zinc finger protein 2 OS=Arabidopsis thaliana OX=3702 GN=ZFP2 PE=1 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 1.3e-11
Identity = 36/63 (57.14%), Postives = 43/63 (68.25%), Query Frame = 0


Query: 62  EPRVFSCNFCQRKFYSSQALGGHQNAHKRERTLAKRGGQRLPAFGGYHHYAAAAAAQSFP 121
           +PRVFSCN+CQRKFYSSQALGGHQNAHK ERTLAK+  +       +       + Q +P
Sbjct: 48  QPRVFSCNYCQRKFYSSQALGGHQNAHKLERTLAKKSREL------FRSSNTVDSDQPYP 104

Query: 122 FRG 125
           F G
Sbjct: 108 FSG 104

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BLAST of Lcy01g015460 vs. ExPASy TrEMBL
Match: A0A0A0LM45 (C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G382580 PE=4 SV=1)

HSP 1 Score: 322.8 bits (826), Expect = 1.2e-84
Identity = 182/248 (73.39%), Postives = 189/248 (76.21%), Query Frame = 0


Query: 1   MESSFTETPPPPKTPSQNPEQYKDDKLEKGFAEEDDGDHHLRRGIPAEELNLIEGLKMGS 60
           MESS   T PPPKT S N EQ  DD+LE       D  HHLRR IPAEELNLIEGLKMGS
Sbjct: 1   MESS---TAPPPKTASYNQEQ-NDDELE-------DNHHHLRREIPAEELNLIEGLKMGS 60

Query: 61  SEPRVFSCNFCQRKFYSSQALGGHQNAHKRERTLAKRGGQRLPAFGGYHHYAAAAAAQSF 120
           SEPRVFSCNFCQRKFYSSQALGGHQNAHKRERTLAKRGGQR PAFG YHHY AAA A SF
Sbjct: 61  SEPRVFSCNFCQRKFYSSQALGGHQNAHKRERTLAKRGGQRFPAFGAYHHY-AAAVAPSF 120

Query: 121 PFRGGP------NRSLGIQVHAMVHKPFHHAPVSS-SGFGIPYGRSH--GWSRIPIHQQP 180
           P  G P      NRSLGIQVHAMVHKP HH P SS S FG+ YGRS+  GWSR PIHQQP
Sbjct: 121 PLPGSPNNNNNNNRSLGIQVHAMVHKPSHHPPASSNSRFGVHYGRSYGGGWSRTPIHQQP 180

Query: 181 GIGKLPLINAGHAINQTPDFAPRGCSSVGRFDFDVVRSTAAGTAAAAGVLFNNKQEETHK 240
           G+GKLPL+NAGH IN T  F PRGCSSVGRFDFDVVRST   TAAA         ++THK
Sbjct: 181 GVGKLPLMNAGHPINHTTGFPPRGCSSVGRFDFDVVRST---TAAA---------DDTHK 224

[Close]

BLAST of Lcy01g015460 vs. ExPASy TrEMBL
Match: A0A5A7VG79 (Zinc finger protein 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G002100 PE=4 SV=1)

HSP 1 Score: 318.2 bits (814), Expect = 3.0e-83
Identity = 173/240 (72.08%), Postives = 180/240 (75.00%), Query Frame = 0


Query: 7   ETPPPPKTPSQNPEQYKDDKLEKGFAEEDDGDHHLRRGIPAEELNLIEGLKMGSSEPRVF 66
           E+   PKT S N EQ   D         +D  HHLRR IPAEELNLIEGLKM SSEPRVF
Sbjct: 2   ESSTAPKTASYNQEQNDGDL--------EDNHHHLRREIPAEELNLIEGLKMASSEPRVF 61

Query: 67  SCNFCQRKFYSSQALGGHQNAHKRERTLAKRGGQRLPAFGGYHHYAAAAAAQSFPFRGGP 126
           SCNFCQRKFYSSQALGGHQNAHKRERTLAKRGGQR PAFGGYHHYAA AAA SF   GGP
Sbjct: 62  SCNFCQRKFYSSQALGGHQNAHKRERTLAKRGGQRFPAFGGYHHYAAVAAAPSFLLPGGP 121

Query: 127 -----NRSLGIQVHAMVHKPFHHAPVSS-SGFGIPYGRSH-GWSRIPIHQQPGIGKLPLI 186
                NRSLGIQVHAMVHKP HH PVSS S FG+ YGRS  GWSR PIHQQPG+GKLPL+
Sbjct: 122 NNNNNNRSLGIQVHAMVHKPSHHPPVSSNSRFGVHYGRSDGGWSRTPIHQQPGVGKLPLM 181

Query: 187 NAGHAINQTPDFAPRGCSSVGRFDFDVVRSTAAGTAAAAGVLFNNKQEETHKVLDLSLKL 240
           NAGH IN T  F PRGCSSVGRFDFDVVRSTAA              ++THKVLDLSLKL
Sbjct: 182 NAGHPINHTTGFPPRGCSSVGRFDFDVVRSTAAAA------------DDTHKVLDLSLKL 221

[Close]

BLAST of Lcy01g015460 vs. ExPASy TrEMBL
Match: A0A1S3BC89 (zinc finger protein 3-like OS=Cucumis melo OX=3656 GN=LOC103488342 PE=4 SV=1)

HSP 1 Score: 318.2 bits (814), Expect = 3.0e-83
Identity = 173/240 (72.08%), Postives = 180/240 (75.00%), Query Frame = 0


Query: 7   ETPPPPKTPSQNPEQYKDDKLEKGFAEEDDGDHHLRRGIPAEELNLIEGLKMGSSEPRVF 66
           E+   PKT S N EQ   D         +D  HHLRR IPAEELNLIEGLKM SSEPRVF
Sbjct: 2   ESSTAPKTASYNQEQNDGDL--------EDNHHHLRREIPAEELNLIEGLKMASSEPRVF 61

Query: 67  SCNFCQRKFYSSQALGGHQNAHKRERTLAKRGGQRLPAFGGYHHYAAAAAAQSFPFRGGP 126
           SCNFCQRKFYSSQALGGHQNAHKRERTLAKRGGQR PAFGGYHHYAA AAA SF   GGP
Sbjct: 62  SCNFCQRKFYSSQALGGHQNAHKRERTLAKRGGQRFPAFGGYHHYAAVAAAPSFLLPGGP 121

Query: 127 -----NRSLGIQVHAMVHKPFHHAPVSS-SGFGIPYGRSH-GWSRIPIHQQPGIGKLPLI 186
                NRSLGIQVHAMVHKP HH PVSS S FG+ YGRS  GWSR PIHQQPG+GKLPL+
Sbjct: 122 NNNNNNRSLGIQVHAMVHKPSHHPPVSSNSRFGVHYGRSDGGWSRTPIHQQPGVGKLPLM 181

Query: 187 NAGHAINQTPDFAPRGCSSVGRFDFDVVRSTAAGTAAAAGVLFNNKQEETHKVLDLSLKL 240
           NAGH IN T  F PRGCSSVGRFDFDVVRSTAA              ++THKVLDLSLKL
Sbjct: 182 NAGHPINHTTGFPPRGCSSVGRFDFDVVRSTAAAA------------DDTHKVLDLSLKL 221

[Close]

BLAST of Lcy01g015460 vs. ExPASy TrEMBL
Match: A0A6J1K332 (zinc finger protein 3-like OS=Cucurbita maxima OX=3661 GN=LOC111491949 PE=4 SV=1)

HSP 1 Score: 295.4 bits (755), Expect = 2.1e-76
Identity = 165/240 (68.75%), Postives = 180/240 (75.00%), Query Frame = 0


Query: 1   MESSFTETPPPPKTPSQNPEQYKDDKLEKGFAEEDDGDHHLRRGIPAEELNLIEGLKMGS 60
           MESS TETPP P  PSQN EQ+ DD+L+KGFAEEDD  HHLR G+PAEELNLI+GLKMG 
Sbjct: 1   MESSTTETPPKP--PSQNQEQH-DDELQKGFAEEDDNHHHLRGGVPAEELNLIDGLKMGL 60

Query: 61  SEPRVFSCNFCQRKFYSSQALGGHQNAHKRERTLAKRGGQRLPAFGGYHHYAAAAAAQSF 120
            E R+FSCNFC+RKFYSSQALGGHQNAHKRERTLAKRGGQR PAFGGYHHYA+AA     
Sbjct: 61  PERRLFSCNFCRRKFYSSQALGGHQNAHKRERTLAKRGGQRPPAFGGYHHYASAA----- 120

Query: 121 PFRGGPNRSLGIQVHAMVHKPFHHAPVSSSGFGIPYGRSHGWSRIPIHQQPGIGKLPLIN 180
                P+RS+GIQVHAMVHKP HHAP     FGI Y    GWSR PIHQQPG+GKLP++N
Sbjct: 121 -----PSRSIGIQVHAMVHKPPHHAP----AFGIIY----GWSRTPIHQQPGVGKLPVMN 180

Query: 181 AGHAINQTPDFAPRGCSSVGRFDFDVVRSTAAGTAAAAGVLFNNKQ-EETHKVLDLSLKL 240
           AGHAIN T            R +FDV RSTA G     GV  NNKQ EE HKV+DLSLKL
Sbjct: 181 AGHAINHTS----------SRMNFDVERSTAGG-----GVGLNNKQEEERHKVVDLSLKL 204

[Close]

BLAST of Lcy01g015460 vs. ExPASy TrEMBL
Match: A0A6J1GJK2 (zinc finger protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111454443 PE=4 SV=1)

HSP 1 Score: 277.7 bits (709), Expect = 4.5e-71
Identity = 156/239 (65.27%), Postives = 173/239 (72.38%), Query Frame = 0


Query: 1   MESSFTETPPPPKTPSQNPEQYKDDKLEKGFAEEDDGDHHLRRGIPAEELNLIEGLKMGS 60
           MESS  +TPP               +L+KGF EEDDGD +LRRGIPAEELNLI  LKMGS
Sbjct: 1   MESSAVDTPPRL-------------QLQKGFGEEDDGDKYLRRGIPAEELNLIGDLKMGS 60

Query: 61  SEPRVFSCNFCQRKFYSSQALGGHQNAHKRERTLAKRGGQRLPAFGGYHHYAAAAAAQSF 120
            EPRVFSCNFC+RKFYSSQALGGHQNAHKRERTLAKR        GGYHHY AAA A  F
Sbjct: 61  IEPRVFSCNFCRRKFYSSQALGGHQNAHKRERTLAKR--------GGYHHYTAAATAPFF 120

Query: 121 PFRGGPNRSLGIQVHAMVHKPFHHAPVSSSGFGIPYGRSHGWSRIPIHQQPGIGKLPLIN 180
           PF+ GPNRSLGIQ+HAMVHKP H+  VSS         SHGWSRIPIHQQPGIGKLP IN
Sbjct: 121 PFQTGPNRSLGIQLHAMVHKPPHYTAVSS---------SHGWSRIPIHQQPGIGKLPPIN 180

Query: 181 AGHAINQTPDFAPRGCSSVGRFDFDVVRSTAAGTAAAAGVLFNNKQEETHKVLDLSLKL 240
                +++P   P G ++VGRF+ D+ RS    TAAA GV F+NKQ+ETHKVLDLSLKL
Sbjct: 181 T----HRSP---PHGFNTVGRFNLDMRRS----TAAAGGVHFDNKQDETHKVLDLSLKL 198

[Close]

BLAST of Lcy01g015460 vs. NCBI nr
Match: XP_038886144.1 (zinc finger protein 3-like [Benincasa hispida])

HSP 1 Score: 330.5 bits (846), Expect = 1.2e-86
Identity = 178/242 (73.55%), Postives = 189/242 (78.10%), Query Frame = 0


Query: 1   MESSFTETPPPPKTPSQNPEQYKDDKLEKGFAEEDDGDHHLRRGIPAEELNLIEGLKMGS 60
           MESS   T PPPKTP  + ++  DD+LE       +  HHLR GIPAEELNLIEGLKMGS
Sbjct: 1   MESS---TSPPPKTPPSHNQEQNDDELE-------ENHHHLRLGIPAEELNLIEGLKMGS 60

Query: 61  SEPRVFSCNFCQRKFYSSQALGGHQNAHKRERTLAKRGGQRLPAFGGYHHYAAAAAAQSF 120
           SEPRVFSCNFCQRKFYSSQALGGHQNAHKRERTLAKRGGQR PAFGGYHHY   AAA SF
Sbjct: 61  SEPRVFSCNFCQRKFYSSQALGGHQNAHKRERTLAKRGGQRFPAFGGYHHY---AAAPSF 120

Query: 121 PFRGGP--NRSLGIQVHAMVHKPFHHAPVSSSG-FGIPYGRSHGWSRIPIHQQPGIGKLP 180
           P  GGP  NRSLGIQVHAMVHKP HHAPVSSS  +GI Y RS+GWSR PIHQQPGIGKL 
Sbjct: 121 PHPGGPNNNRSLGIQVHAMVHKPSHHAPVSSSSRYGILYDRSYGWSRTPIHQQPGIGKLH 180

Query: 181 LINAGHAINQTPDFAPRGCSSVGRFDFDVVRSTAAGTAAAAGVLFNNKQEETHKVLDLSL 240
           L+NAGHAIN T  F PRGC+SVGRFDFDVVRSTAA              ++THKVLDLSL
Sbjct: 181 LMNAGHAINHTDGFPPRGCNSVGRFDFDVVRSTAAAA------------DDTHKVLDLSL 217

[Close]

BLAST of Lcy01g015460 vs. NCBI nr
Match: XP_011649844.1 (zinc finger protein 3 [Cucumis sativus] >KGN62985.1 hypothetical protein Csa_021975 [Cucumis sativus])

HSP 1 Score: 322.8 bits (826), Expect = 2.5e-84
Identity = 182/248 (73.39%), Postives = 189/248 (76.21%), Query Frame = 0


Query: 1   MESSFTETPPPPKTPSQNPEQYKDDKLEKGFAEEDDGDHHLRRGIPAEELNLIEGLKMGS 60
           MESS   T PPPKT S N EQ  DD+LE       D  HHLRR IPAEELNLIEGLKMGS
Sbjct: 1   MESS---TAPPPKTASYNQEQ-NDDELE-------DNHHHLRREIPAEELNLIEGLKMGS 60

Query: 61  SEPRVFSCNFCQRKFYSSQALGGHQNAHKRERTLAKRGGQRLPAFGGYHHYAAAAAAQSF 120
           SEPRVFSCNFCQRKFYSSQALGGHQNAHKRERTLAKRGGQR PAFG YHHY AAA A SF
Sbjct: 61  SEPRVFSCNFCQRKFYSSQALGGHQNAHKRERTLAKRGGQRFPAFGAYHHY-AAAVAPSF 120

Query: 121 PFRGGP------NRSLGIQVHAMVHKPFHHAPVSS-SGFGIPYGRSH--GWSRIPIHQQP 180
           P  G P      NRSLGIQVHAMVHKP HH P SS S FG+ YGRS+  GWSR PIHQQP
Sbjct: 121 PLPGSPNNNNNNNRSLGIQVHAMVHKPSHHPPASSNSRFGVHYGRSYGGGWSRTPIHQQP 180

Query: 181 GIGKLPLINAGHAINQTPDFAPRGCSSVGRFDFDVVRSTAAGTAAAAGVLFNNKQEETHK 240
           G+GKLPL+NAGH IN T  F PRGCSSVGRFDFDVVRST   TAAA         ++THK
Sbjct: 181 GVGKLPLMNAGHPINHTTGFPPRGCSSVGRFDFDVVRST---TAAA---------DDTHK 224

[Close]

BLAST of Lcy01g015460 vs. NCBI nr
Match: XP_008445256.1 (PREDICTED: zinc finger protein 3-like [Cucumis melo] >KAA0064895.1 zinc finger protein 3-like [Cucumis melo var. makuwa])

HSP 1 Score: 318.2 bits (814), Expect = 6.2e-83
Identity = 173/240 (72.08%), Postives = 180/240 (75.00%), Query Frame = 0


Query: 7   ETPPPPKTPSQNPEQYKDDKLEKGFAEEDDGDHHLRRGIPAEELNLIEGLKMGSSEPRVF 66
           E+   PKT S N EQ   D         +D  HHLRR IPAEELNLIEGLKM SSEPRVF
Sbjct: 2   ESSTAPKTASYNQEQNDGDL--------EDNHHHLRREIPAEELNLIEGLKMASSEPRVF 61

Query: 67  SCNFCQRKFYSSQALGGHQNAHKRERTLAKRGGQRLPAFGGYHHYAAAAAAQSFPFRGGP 126
           SCNFCQRKFYSSQALGGHQNAHKRERTLAKRGGQR PAFGGYHHYAA AAA SF   GGP
Sbjct: 62  SCNFCQRKFYSSQALGGHQNAHKRERTLAKRGGQRFPAFGGYHHYAAVAAAPSFLLPGGP 121

Query: 127 -----NRSLGIQVHAMVHKPFHHAPVSS-SGFGIPYGRSH-GWSRIPIHQQPGIGKLPLI 186
                NRSLGIQVHAMVHKP HH PVSS S FG+ YGRS  GWSR PIHQQPG+GKLPL+
Sbjct: 122 NNNNNNRSLGIQVHAMVHKPSHHPPVSSNSRFGVHYGRSDGGWSRTPIHQQPGVGKLPLM 181

Query: 187 NAGHAINQTPDFAPRGCSSVGRFDFDVVRSTAAGTAAAAGVLFNNKQEETHKVLDLSLKL 240
           NAGH IN T  F PRGCSSVGRFDFDVVRSTAA              ++THKVLDLSLKL
Sbjct: 182 NAGHPINHTTGFPPRGCSSVGRFDFDVVRSTAAAA------------DDTHKVLDLSLKL 221

[Close]

BLAST of Lcy01g015460 vs. NCBI nr
Match: XP_022996822.1 (zinc finger protein 3-like [Cucurbita maxima])

HSP 1 Score: 295.4 bits (755), Expect = 4.3e-76
Identity = 165/240 (68.75%), Postives = 180/240 (75.00%), Query Frame = 0


Query: 1   MESSFTETPPPPKTPSQNPEQYKDDKLEKGFAEEDDGDHHLRRGIPAEELNLIEGLKMGS 60
           MESS TETPP P  PSQN EQ+ DD+L+KGFAEEDD  HHLR G+PAEELNLI+GLKMG 
Sbjct: 1   MESSTTETPPKP--PSQNQEQH-DDELQKGFAEEDDNHHHLRGGVPAEELNLIDGLKMGL 60

Query: 61  SEPRVFSCNFCQRKFYSSQALGGHQNAHKRERTLAKRGGQRLPAFGGYHHYAAAAAAQSF 120
            E R+FSCNFC+RKFYSSQALGGHQNAHKRERTLAKRGGQR PAFGGYHHYA+AA     
Sbjct: 61  PERRLFSCNFCRRKFYSSQALGGHQNAHKRERTLAKRGGQRPPAFGGYHHYASAA----- 120

Query: 121 PFRGGPNRSLGIQVHAMVHKPFHHAPVSSSGFGIPYGRSHGWSRIPIHQQPGIGKLPLIN 180
                P+RS+GIQVHAMVHKP HHAP     FGI Y    GWSR PIHQQPG+GKLP++N
Sbjct: 121 -----PSRSIGIQVHAMVHKPPHHAP----AFGIIY----GWSRTPIHQQPGVGKLPVMN 180

Query: 181 AGHAINQTPDFAPRGCSSVGRFDFDVVRSTAAGTAAAAGVLFNNKQ-EETHKVLDLSLKL 240
           AGHAIN T            R +FDV RSTA G     GV  NNKQ EE HKV+DLSLKL
Sbjct: 181 AGHAINHTS----------SRMNFDVERSTAGG-----GVGLNNKQEEERHKVVDLSLKL 204

[Close]

BLAST of Lcy01g015460 vs. NCBI nr
Match: XP_023546670.1 (zinc finger protein 3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 288.5 bits (737), Expect = 5.3e-74
Identity = 164/240 (68.33%), Postives = 177/240 (73.75%), Query Frame = 0


Query: 1   MESSFTETPPPPKTPSQNPEQYKDDKLEKGFAEEDDGDHHLRRGIPAEELNLIEGLKMGS 60
           MESS TETPP P  PSQN EQ+ DD+L+KGFA  DD  H+LRRG+PAEELNLI+GLKMG 
Sbjct: 1   MESSTTETPPKP--PSQNHEQH-DDELQKGFA--DDNHHYLRRGVPAEELNLIDGLKMGL 60

Query: 61  SEPRVFSCNFCQRKFYSSQALGGHQNAHKRERTLAKRGGQRLPAFGGYHHYAAAAAAQSF 120
            EPRVFSCNFC+RKFYSSQALGGHQNAHKRER LAKRGGQRLPAFGGYHHYA+AA     
Sbjct: 61  PEPRVFSCNFCRRKFYSSQALGGHQNAHKRERALAKRGGQRLPAFGGYHHYASAA----- 120

Query: 121 PFRGGPNRSLGIQVHAMVHKPFHHAPVSSSGFGIPYGRSHGWSRIPIHQQPGIGKLPLIN 180
                P RS+GIQVHAMVHKP HHAP     FGI Y    GWSR PIHQ+P +GKLP++N
Sbjct: 121 -----PFRSIGIQVHAMVHKPPHHAP----AFGILY----GWSRTPIHQRPDVGKLPVMN 180

Query: 181 AGHAINQTPDFAPRGCSSVGRFDFDVVRSTAAGTAAAAGVLFNNKQ-EETHKVLDLSLKL 240
           AGHAIN T           GR DFDV RSTA G     GV   NKQ EE HK LDLSLKL
Sbjct: 181 AGHAINHTS----------GRMDFDVERSTAGG-----GVGLKNKQEEERHKALDLSLKL 202

[Close]

BLAST of Lcy01g015460 vs. TAIR 10
Match: AT5G10970.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 129.8 bits (325), Expect = 2.9e-30
Identity = 99/259 (38.22%), Postives = 129/259 (49.81%), Query Frame = 0


Query: 14  TPSQNPEQYKDDKLEKGFAEEDDGDHHLRRGIPA------------------EELNLIEG 73
           +P  + E Y  D +    A +++ DH  + G+                    +ELNL++ 
Sbjct: 28  SPKLSLENYNIDTV----AAQEEDDHDQKEGVEGIKLDLMLAGYDSSQPQLNQELNLLDC 87

Query: 74  LKMG----------SSEPRVFSCNFCQRKFYSSQALGGHQNAHKRERTLAKRGGQRLPAF 133
           L+ G          S+E ++FSCN+CQR FYSSQALGGHQNAHKRERTLAKRG +   A 
Sbjct: 88  LETGVVTPSFNGSTSTEQKLFSCNYCQRTFYSSQALGGHQNAHKRERTLAKRGQRMASAA 147

Query: 134 GGYHHYAAAAAAQSFPFRGG-PNRSLGIQVHAMVHKPFHHAPVSSSGFGIPYGRSHGWSR 193
              H Y  A      PF G   NR+LGIQ H+M HK     P S + +G  YG+ + WSR
Sbjct: 148 AFGHPYGFAPV----PFHGQYSNRTLGIQAHSMSHK-----PSSYNVYGGEYGQIN-WSR 207

Query: 194 IPIHQQPGIGKLPLINAGHAINQTPDFAP--RGCSSVGRFDFD--VVRSTAAGTAAAAGV 240
           IP+ QQP I KL      +  +Q     P    C ++GRFD     V    +        
Sbjct: 208 IPLVQQPAIAKLTSTENHYNHHQMMIAPPLTSTCENIGRFDVGRIPVEFPTSELWQRGEE 267

[Close]

BLAST of Lcy01g015460 vs. TAIR 10
Match: AT5G25160.1 (zinc finger protein 3 )

HSP 1 Score: 121.7 bits (304), Expect = 8.0e-28
Identity = 92/234 (39.32%), Postives = 118/234 (50.43%), Query Frame = 0


Query: 25  DKLEKGFAEEDDGDHHLRRGIPAEELNLIEGL---------KMGSSEPRVFSCNFCQRKF 84
           D L +   +E+   H+      + ELNLI+ +            S+E ++FSCN+CQR F
Sbjct: 16  DSLNQSIEDEERDVHN-----SSHELNLIDCIDDTTSIVNESTTSTEQKLFSCNYCQRTF 75

Query: 85  YSSQALGGHQNAHKRERTLAKRGGQRLPAFGGYHHYAAAAAAQSFPFRGGPN--RSLGIQ 144
           YSSQALGGHQNAHKRERTLAKRG +   +   + H          PF G  N  RSLGIQ
Sbjct: 76  YSSQALGGHQNAHKRERTLAKRGQRMAASASAFGH---PYGFSPLPFHGQYNNHRSLGIQ 135

Query: 145 VHAMVHKPFHHAPVSSSGFGIPYGRSHGWSRIPIHQQPGIGKLP-LINAGHAINQTPDFA 204
            H++ HK       S +GFG  YG+ + WSR+P  QQP IGK P + N  H  +Q    A
Sbjct: 136 AHSISHK-----LSSYNGFGGHYGQIN-WSRLPFDQQPAIGKFPSMDNFHHHHHQMMMMA 195

Query: 205 PRGCSSVGRFDFD-----VVRS--TAAGTAAAAGVLFNNKQEETHKVLDLSLKL 240
           P   S     D       V+    T        G+L +    E  + LDLSLKL
Sbjct: 196 PSVNSRSNNIDSPSNTGRVLEGSPTLEQWHGDKGLLLSTSHHEEQQKLDLSLKL 235

[Close]

BLAST of Lcy01g015460 vs. TAIR 10
Match: AT1G80730.1 (zinc-finger protein 1 )

HSP 1 Score: 105.1 bits (261), Expect = 7.7e-23
Identity = 71/154 (46.10%), Postives = 87/154 (56.49%), Query Frame = 0


Query: 47  AEELNLIEGLKMGSS-------------EPRVFSCNFCQRKFYSSQALGGHQNAHKRERT 106
           + ELNLI+  K  SS             +PRVFSCN+CQRKFYSSQALGGHQNAHKRERT
Sbjct: 36  SSELNLIDSFKTSSSSTSHHQHQQEQLADPRVFSCNYCQRKFYSSQALGGHQNAHKRERT 95

Query: 107 LAKRGG------QRLP--AFG-GYHHYAAAAAAQSFPFRGGPNR--SLGIQVHAMVHKPF 166
           LAKRG         LP  AF  G+   +  A+  S P  G  N   +LGIQ H+ +HKP 
Sbjct: 96  LAKRGQYYKMTLSSLPSSAFAFGHGSVSRFASMASLPLHGSVNNRSTLGIQAHSTIHKPS 155

Query: 167 HHAPVSSSGFGIPYGRSHGWSRIPIHQQPGIGKL 177
                ++S        SH + +  IHQ+P IGK+
Sbjct: 156 FLGRQTTS-------LSHVFKQ-SIHQKPTIGKM 181

[Close]

BLAST of Lcy01g015460 vs. TAIR 10
Match: AT1G66140.1 (zinc finger protein 4 )

HSP 1 Score: 87.0 bits (214), Expect = 2.2e-17
Identity = 51/94 (54.26%), Postives = 58/94 (61.70%), Query Frame = 0


Query: 60  SSEPRVFSCNFCQRKFYSSQALGGHQNAHKRERTLAKRGGQR-----LPAFGGYHHYAAA 119
           S   RVFSCN+CQRKFYSSQALGGHQNAHKRERTLAKR  +       P  G   +YAAA
Sbjct: 79  SVSKRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRAMRMGLAGVFPGRGSSSNYAAA 138

Query: 120 AAAQS---FPFRGGPN------RSLGIQVHAMVH 140
           A A +    P  G  N      R+LGI+ H+  H
Sbjct: 139 ATAAALSCLPLHGSGNGNMTSFRTLGIRAHSSAH 172

[Close]

BLAST of Lcy01g015460 vs. TAIR 10
Match: AT1G24625.1 (zinc finger protein 7 )

HSP 1 Score: 78.2 bits (191), Expect = 1.0e-14
Identity = 42/76 (55.26%), Postives = 49/76 (64.47%), Query Frame = 0


Query: 61  SEPRVFSCNFCQRKFYSSQALGGHQNAHKRERTLAKRGGQRLPAFGGYHHYAAAAAAQSF 120
           + PRVFSCN+C+RKFYSSQALGGHQNAHKRERT+AKR       FG  HH+       S 
Sbjct: 54  ANPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKRAMHMGRMFG--HHHRPYTYTSS- 113

Query: 121 PFRGGPNRSLGIQVHA 137
                   SLG+Q H+
Sbjct: 114 --------SLGMQAHS 118

The following BLAST results are available for this feature:

BLAST of Lcy01g015460 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q39262	1.1e-26	39.32	Zinc finger protein 3 OS=Arabidopsis thaliana OX=3702 GN=ZFP3 PE=1 SV=1	[more]
Q42485	1.1e-21	46.10	Zinc finger protein 1 OS=Arabidopsis thaliana OX=3702 GN=ZFP1 PE=2 SV=1	[more]
Q39263	3.1e-16	54.26	Zinc finger protein 4 OS=Arabidopsis thaliana OX=3702 GN=ZFP4 PE=2 SV=2	[more]
Q39266	1.4e-13	55.26	Zinc finger protein 7 OS=Arabidopsis thaliana OX=3702 GN=ZFP7 PE=1 SV=1	[more]
Q39261	1.3e-11	57.14	Zinc finger protein 2 OS=Arabidopsis thaliana OX=3702 GN=ZFP2 PE=1 SV=1	[more]

BLAST of Lcy01g015460 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LM45	1.2e-84	73.39	C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G382580 P...	[more]
A0A5A7VG79	3.0e-83	72.08	Zinc finger protein 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaff...	[more]
A0A1S3BC89	3.0e-83	72.08	zinc finger protein 3-like OS=Cucumis melo OX=3656 GN=LOC103488342 PE=4 SV=1	[more]
A0A6J1K332	2.1e-76	68.75	zinc finger protein 3-like OS=Cucurbita maxima OX=3661 GN=LOC111491949 PE=4 SV=1	[more]
A0A6J1GJK2	4.5e-71	65.27	zinc finger protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111454443 PE=4 SV...	[more]

BLAST of Lcy01g015460 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038886144.1	1.2e-86	73.55	zinc finger protein 3-like [Benincasa hispida]	[more]
XP_011649844.1	2.5e-84	73.39	zinc finger protein 3 [Cucumis sativus] >KGN62985.1 hypothetical protein Csa_021...	[more]
XP_008445256.1	6.2e-83	72.08	PREDICTED: zinc finger protein 3-like [Cucumis melo] >KAA0064895.1 zinc finger p...	[more]
XP_022996822.1	4.3e-76	68.75	zinc finger protein 3-like [Cucurbita maxima]	[more]
XP_023546670.1	5.3e-74	68.33	zinc finger protein 3-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Lcy01g015460 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G10970.1	2.9e-30	38.22	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT5G25160.1	8.0e-28	39.32	zinc finger protein 3	[more]
AT1G80730.1	7.7e-23	46.10	zinc-finger protein 1	[more]
AT1G66140.1	2.2e-17	54.26	zinc finger protein 4	[more]
AT1G24625.1	1.0e-14	55.26	zinc finger protein 7	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.160.60	Classic Zinc Finger	coord: 50..112 e-value: 5.5E-6 score: 28.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..41
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 19..41
None	No IPR available	PANTHER	PTHR47287:SF1	ZINC FINGER PROTEIN 1-LIKE	coord: 35..239
IPR044246	Zinc finger protein 3-like	PANTHER	PTHR47287	C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN	coord: 35..239
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 68..88
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 66..93 score: 11.239817
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	57667	beta-beta-alpha zinc fingers	coord: 63..93

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy01g015460.1	Lcy01g015460.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009788	negative regulation of abscisic acid-activated signaling pathway