Homology
BLAST of Lcy01g013290 vs. ExPASy Swiss-Prot
Match:
Q9FXH1 (Pentatricopeptide repeat-containing protein At1g19720 OS=Arabidopsis thaliana OX=3702 GN=DYW7 PE=2 SV=1)
HSP 1 Score: 344.7 bits (883), Expect = 2.3e-93
Identity = 183/531 (34.46%), Postives = 302/531 (56.87%), Query Frame = 0
Query: 101 DSLFGNNLAKLYVK--CVDSDCKLFDEIPERTLSAYAALIRAYCRSEKWNELFAAFRSMV 160
D L +Y K C+ K+FD + ER L ++A+I AY R +W E+ FR M+
Sbjct: 114 DVFVETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMM 173
Query: 161 DEGILPDKYLVPTILKACSRRQVVTTGKMIHGYVIRKRLVSDIFIGNALMDFYGNCGDLT 220
+G+LPD +L P IL+ C+ V GK+IH VI+ + S + + N+++ Y CG+L
Sbjct: 174 KDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELD 233
Query: 221 SSINVFDSMSEKDVVSWTALVSAYIEEGLLDEAMESFHSMQASGLKPDLISWNALVSGFA 280
+ F M E+DV++W +++ AY + G +EA+E M+ G+ P L++WN L+ G+
Sbjct: 234 FATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYN 293
Query: 281 RYGEIDTALEYLETMQENGLSPRVNSWNAIISGCVQNGYFKDALDVFINMLLFPENPNSV 340
+ G+ D A++ ++ M+ G++ V +W A+ISG + NG ALD+F M L PN+V
Sbjct: 294 QLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAV 353
Query: 341 TVASILPACAGLRDLSLGRAIHAYALKRELCTNIYVEGSLVDMYSKCGQDDYAEEVFAKA 400
T+ S + AC+ L+ ++ G +H+ A+K ++ V SLVDMYSKCG+ + A +VF
Sbjct: 354 TIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSV 413
Query: 401 EKKNITLWNEIIATYVNQGKIDQALERFRSMQHHGLKPDVVTYNTLLAGHAKNGQKVEAY 460
+ K++ WN +I Y G +A E F MQ L+P+++T+NT+++G+ KNG + EA
Sbjct: 414 KNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAM 473
Query: 461 KLLSEMLQN-DLAPNVVSLNVLVSGFQQSGLSYEALKLFQTKLCTGCLLNKVITLSIRPN 520
L M ++ + N + N++++G+ Q+G EAL+LF+ K+ PN
Sbjct: 474 DLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFR----------KMQFSRFMPN 533
Query: 521 TVTITSALAACASLNLLCKGKEIHGYMLRNAFEDNHFVSSALIDMYIKCGNIGSAIQVFR 580
+VTI S L ACA+L +EIHG +LR + H V +AL D Y K G+I + +F
Sbjct: 534 SVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFL 593
Query: 581 RIKNRNVVCWNALMAGLMKIMQPKVAIDFFCQMLVEGTKPSSVTFSILLPA 629
++ ++++ WN+L+ G + A+ F QM +G P+ T S ++ A
Sbjct: 594 GMETKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILA 634
BLAST of Lcy01g013290 vs. ExPASy Swiss-Prot
Match:
Q9SV26 (Pentatricopeptide repeat-containing protein At4g01030, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H65 PE=3 SV=2)
HSP 1 Score: 285.8 bits (730), Expect = 1.3e-75
Identity = 168/517 (32.50%), Postives = 272/517 (52.61%), Query Frame = 0
Query: 112 YVKCVDSDC--KLFDEIPERTLSAYAALIRAYCRSEKWNELFAAFRSMVDEGILPDKYLV 171
Y +CV KLFDE+P+R A+ ++ RS W + FR M G +
Sbjct: 33 YGRCVSLGFANKLFDEMPKRDDLAWNEIVMVNLRSGNWEKAVELFREMQFSGAKAYDSTM 92
Query: 172 PTILKACSRRQVVTTGKMIHGYVIRKRLVSDIFIGNALMDFYGNCGDLTSSINVFDSMSE 231
+L+ CS ++ G+ IHGYV+R L S++ + N+L+ Y G L S VF+SM +
Sbjct: 93 VKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKD 152
Query: 232 KDVVSWTALVSAYIEEGLLDEAMESFHSMQASGLKPDLISWNALVSGFARYGEIDTALEY 291
+++ SW +++S+Y + G +D+A+ M+ GLKPD+++WN+L+SG+A G A+
Sbjct: 153 RNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAV 212
Query: 292 LETMQENGLSPRVNSWNAIISGCVQNGYFKDALDVFINMLLFPENPNSVTVASILPACAG 351
L+ MQ GL P +S ++S+L A A
Sbjct: 213 LKRMQIAGLKPSTSS-----------------------------------ISSLLQAVAE 272
Query: 352 LRDLSLGRAIHAYALKRELCTNIYVEGSLVDMYSKCGQDDYAEEVFAKAEKKNITLWNEI 411
L LG+AIH Y L+ +L ++YVE +L+DMY K G YA VF + KNI WN +
Sbjct: 273 PGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSL 332
Query: 412 IATYVNQGKIDQALERFRSMQHHGLKPDVVTYNTLLAGHAKNGQKVEAYKLLSEMLQNDL 471
++ + A M+ G+KPD +T+N+L +G+A G+ +A ++ +M + +
Sbjct: 333 VSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGV 392
Query: 472 APNVVSLNVLVSGFQQSGLSYEALKLFQTKLCTGCLLNKVITLSIRPNTVTITSALAACA 531
APNVVS + SG ++G ALK+F K+ + PN T+++ L
Sbjct: 393 APNVVSWTAIFSGCSKNGNFRNALKVF----------IKMQEEGVGPNAATMSTLLKILG 452
Query: 532 SLNLLCKGKEIHGYMLRNAFEDNHFVSSALIDMYIKCGNIGSAIQVFRRIKNRNVVCWNA 591
L+LL GKE+HG+ LR + +V++AL+DMY K G++ SAI++F IKN+++ WN
Sbjct: 453 CLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNC 504
Query: 592 LMAGLMKIMQPKVAIDFFCQMLVEGTKPSSVTFSILL 627
++ G + + I F ML G +P ++TF+ +L
Sbjct: 513 MLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVL 504
BLAST of Lcy01g013290 vs. ExPASy Swiss-Prot
Match:
Q9FM64 (Pentatricopeptide repeat-containing protein At5g55740, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CRR21 PE=2 SV=1)
HSP 1 Score: 285.4 bits (729), Expect = 1.7e-75
Identity = 171/581 (29.43%), Postives = 293/581 (50.43%), Query Frame = 0
Query: 108 LAKLYVKC--VDSDCKLFDEIPERTLSAYAALIRAYCRSEKWNELFAAFRSMVDEGILPD 167
L Y KC ++ LF ++ R + ++AA+I CR F M++ I PD
Sbjct: 113 LVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPD 172
Query: 168 KYLVPTILKACSRRQVVTTGKMIHGYVIRKRLVSDIFIGNALMDFYGNCGDLTSSINVFD 227
++VP + KAC + G+ +HGYV++ L +F+ ++L D YG CG L + VFD
Sbjct: 173 NFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFD 232
Query: 228 SMSEKDVVSWTALVSAYIEEGLLDEAMESFHSMQASGLKPDLISWNALVSGFARYG---- 287
+ +++ V+W AL+ Y++ G +EA+ F M+ G++P ++ + +S A G
Sbjct: 233 EIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEE 292
Query: 288 -------------EIDTAL--------------EYLETMQENGLSPRVNSWNAIISGCVQ 347
E+D L EY E + + V +WN IISG VQ
Sbjct: 293 GKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQ 352
Query: 348 NGYFKDALDVFINMLLFPENPNSVTVASILPACAGLRDLSLGRAIHAYALKRELCTNIYV 407
G +DA+ + M L + VT+A+++ A A +L LG+ + Y ++ ++I +
Sbjct: 353 QGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVL 412
Query: 408 EGSLVDMYSKCGQDDYAEEVFAKAEKKNITLWNEIIATYVNQGKIDQALERFRSMQHHGL 467
+++DMY+KCG A++VF +K++ LWN ++A Y G +AL F MQ G+
Sbjct: 413 ASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGV 472
Query: 468 KPDVVTYNTLLAGHAKNGQKVEAYKLLSEMLQNDLAPNVVSLNVLVSGFQQSGLSYEALK 527
P+V+T+N ++ +NGQ EA + +M + + PN++S +++G Q+G S EA+
Sbjct: 473 PPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAI- 532
Query: 528 LFQTKLCTGCLLNKVITLSIRPNTVTITSALAACASLNLLCKGKEIHGYMLRNAFEDNHF 587
L K+ +RPN +IT AL+ACA L L G+ IHGY++RN +
Sbjct: 533 ---------LFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLV 592
Query: 588 -VSSALIDMYIKCGNIGSAIQVFRRIKNRNVVCWNALMAGLMKIMQPKVAIDFFCQMLVE 647
+ ++L+DMY KCG+I A +VF + NA+++ K AI + +
Sbjct: 593 SIETSLVDMYAKCGDINKAEKVFGSKLYSELPLSNAMISAYALYGNLKEAIALYRSLEGV 652
Query: 648 GTKPSSVTFSILLPALADRADLEARRQLHSYIIKSQLLESC 655
G KP ++T + +L A D+ ++ + I+ + ++ C
Sbjct: 653 GLKPDNITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPC 683
BLAST of Lcy01g013290 vs. ExPASy Swiss-Prot
Match:
Q9SS83 (Pentatricopeptide repeat-containing protein At3g09040, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E88 PE=2 SV=1)
HSP 1 Score: 252.3 bits (643), Expect = 1.6e-65
Identity = 168/567 (29.63%), Postives = 279/567 (49.21%), Query Frame = 0
Query: 105 GNNLAKLYVKC--VDSDCKLFDEIPERTLSAYAALIRAYCRSEKWNELFAAFRSMVDEGI 164
GN + LY KC V K FD + E+ ++A+ +++ Y K ++ +F S+ + I
Sbjct: 98 GNAIVDLYAKCAQVSYAEKQFDFL-EKDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQI 157
Query: 165 LPDKYLVPTILKACSRRQVVTTGKMIHGYVIRKRLVSDIFIGNALMDFYGNCGDLTSSIN 224
P+K+ +L C+R V G+ IH +I+ L + + G AL+D Y C ++ +
Sbjct: 158 FPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARR 217
Query: 225 VFDSMSEKDVVSWTALVSAYIEEGLLDEAMESFHSMQASGLKPDLISWNALVSGFARYGE 284
VF+ + + + V WT L S Y++ GL +EA+ F M+ G +PD +++ +++ + R G+
Sbjct: 218 VFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGK 277
Query: 285 IDTALEYLETMQENGLSPRVNSWNAIISGCVQNGYFKDALDVFINMLLFPENPNSVTVAS 344
+ A M SP V +WN +ISG + G A++ F NM T+ S
Sbjct: 278 LKDARLLFGEMS----SPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGS 337
Query: 345 ILPACAGLRDLSLGRAIHAYALKRELCTNIYVEGSLVDMYSKCGQDDYAEEVFAKAEKKN 404
+L A + +L LG +HA A+K L +NIYV SLV MYSKC + + A +VF E+KN
Sbjct: 338 VLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKN 397
Query: 405 ITLWNEIIATYVNQGKIDQALERFRSMQHHGLKPDVVTYNTLLAGHAKNGQKVEAYKLLS 464
WN +I Y + G+ + +E F M+ G D T+ +LL+ A + + S
Sbjct: 398 DVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHS 457
Query: 465 EMLQNDLAPNVVSLNVLVSGFQQSGLSYEALKLFQTKLC--------------------- 524
+++ LA N+ N LV + + G +A ++F+ ++C
Sbjct: 458 IIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFE-RMCDRDNVTWNTIIGSYVQDENES 517
Query: 525 -TGCLLNKVITLSIRPNTVTITSALAACASLNLLCKGKEIHGYMLRNAFEDNHFVSSALI 584
L ++ I + + S L AC ++ L +GK++H ++ + + S+LI
Sbjct: 518 EAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLI 577
Query: 585 DMYIKCGNIGSAIQVFRRIKNRNVVCWNALMAGLMKIMQPKVAIDFFCQMLVEGTKPSSV 644
DMY KCG I A +VF + +VV NAL+AG + + A+ F +ML G PS +
Sbjct: 578 DMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQ-NNLEEAVVLFQEMLTRGVNPSEI 637
Query: 645 TFSILLPALADRADLEARRQLHSYIIK 648
TF+ ++ A L Q H I K
Sbjct: 638 TFATIVEACHKPESLTLGTQFHGQITK 657
BLAST of Lcy01g013290 vs. ExPASy Swiss-Prot
Match:
Q9LNU6 (Pentatricopeptide repeat-containing protein At1g20230 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H21 PE=2 SV=2)
HSP 1 Score: 239.2 bits (609), Expect = 1.4e-61
Identity = 147/514 (28.60%), Postives = 243/514 (47.28%), Query Frame = 0
Query: 115 CVDSDCKLFDEIPERTLSAYAALIRAYCRSEKWNELFAAFRSMVDEGILPDKYLVPTILK 174
C + + IP+ T+ ++++LI A +++ + + F M G++PD +++P + K
Sbjct: 65 CFNDADLVLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFK 124
Query: 175 ACSRRQVVTTGKMIHGYVIRKRLVSDIFIGNALMDFYGNCGDLTSSINVFDSMSEKDVVS 234
C+ GK IH L D F+ ++ Y CG + + VFD MS+KDVV+
Sbjct: 125 VCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVT 184
Query: 235 WTALVSAYIEEGLLDEAMESFHSMQASGLKPDLISWNALVSGFARYGEIDTALEYLETMQ 294
+AL+ AY +G L+E + M++SG++ +++SWN ++SGF R
Sbjct: 185 CSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNR--------------- 244
Query: 295 ENGLSPRVNSWNAIISGCVQNGYFKDALDVFINMLLFPENPNSVTVASILPACAGLRDLS 354
+GY K+A+ +F + P+ VTV+S+LP+ L+
Sbjct: 245 --------------------SGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLN 304
Query: 355 LGRAIHAYALKRELCTNIYVEGSLVDMYSKCGQDDYAEEVFAKAEKKNITLWNEIIATYV 414
+GR IH Y +K+ L + V +++DMY K G +F + E + N I
Sbjct: 305 MGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLS 364
Query: 415 NQGKIDQALERFRSMQHHGLKPDVVTYNTLLAGHAKNGQKVEAYKLLSEMLQNDLAPNVV 474
G +D+ALE F + ++ +VV++ +++AG A+NG+ +EA +L EM
Sbjct: 365 RNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREM---------- 424
Query: 475 SLNVLVSGFQQSGLSYEALKLFQTKLCTGCLLNKVITLSIRPNTVTITSALAACASLNLL 534
Q +G ++PN VTI S L AC ++ L
Sbjct: 425 ---------QVAG--------------------------VKPNHVTIPSMLPACGNIAAL 484
Query: 535 CKGKEIHGYMLRNAFEDNHFVSSALIDMYIKCGNIGSAIQVFRRIKNRNVVCWNALMAGL 594
G+ HG+ +R DN V SALIDMY KCG I + VF + +N+VCWN+LM G
Sbjct: 485 GHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGF 498
Query: 595 MKIMQPKVAIDFFCQMLVEGTKPSSVTFSILLPA 629
+ K + F ++ KP ++F+ LL A
Sbjct: 545 SMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSA 498
BLAST of Lcy01g013290 vs. ExPASy TrEMBL
Match:
A0A5A7VGH4 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G001190 PE=4 SV=1)
HSP 1 Score: 1077.4 bits (2785), Expect = 0.0e+00
Identity = 548/678 (80.83%), Postives = 597/678 (88.05%), Query Frame = 0
Query: 1 MATLVDGFLSSNNATPSDLPSSSKLNFDLHPSFRFSRISMNVACRMHFSAVSARNRHQCQ 60
MAT +DGF+SSNNA+P LPS K +FDL+P+ FSR SMNVACRMHF+AV ARNR CQ
Sbjct: 1 MATPLDGFVSSNNASPR-LPSFPKFHFDLYPNSSFSRNSMNVACRMHFNAVWARNRPNCQ 60
Query: 61 FAPIAKSTGRNDVGFNIPIARSLALFNRNVQVVKLNAHRVDSLFGNNLAKLY---VKCVD 120
F+PIA T + G N+PI S LFN N QVVKLNA RVD+LFG L K Y VKCVD
Sbjct: 61 FSPIAIRT--DCEGVNVPIPGSFVLFNHNSQVVKLNACRVDNLFGKKLTKFYVKDVKCVD 120
Query: 121 SDCKLFDEIPERTLSAYAALIRAYCRSEKWNELFAAFRSMVDEGILPDKYLVPTILKACS 180
D K+FDEIPER L YAALIRAYCRSEKWNELFAAFRSMVDEGILPDKYLVPT+LKACS
Sbjct: 121 GDSKVFDEIPERALPTYAALIRAYCRSEKWNELFAAFRSMVDEGILPDKYLVPTVLKACS 180
Query: 181 RRQVVTTGKMIHGYVIRKRLVSDIFIGNALMDFYGNCGDLTSSINVFDSMSEKDVVSWTA 240
RRQ+V TGKM+HGY IRKR+VSDI IGNALMDFYGNC DL SSINVFDSMSEKDVVSWTA
Sbjct: 181 RRQMVKTGKMVHGYAIRKRMVSDIVIGNALMDFYGNCRDLGSSINVFDSMSEKDVVSWTA 240
Query: 241 LVSAYIEEGLLDEAMESFHSMQASGLKPDLISWNALVSGFARYGEIDTALEYLETMQENG 300
LVSAYIEEGLL+EAM+ FHSMQ+SGLKPDLISWNALVSGFARYGE +TAL YLE MQE G
Sbjct: 241 LVSAYIEEGLLNEAMKVFHSMQSSGLKPDLISWNALVSGFARYGETNTALTYLEAMQEEG 300
Query: 301 LSPRVNSWNAIISGCVQNGYFKDALDVFINMLLFPENPNSVTVASILPACAGLRDLSLGR 360
L PRVNSWN +ISGCVQNGYFKDALDVFINMLLFPENPNSVTVASILPACAGLR+L LGR
Sbjct: 301 LRPRVNSWNGVISGCVQNGYFKDALDVFINMLLFPENPNSVTVASILPACAGLRNLGLGR 360
Query: 361 AIHAYALKRELCTNIYVEGSLVDMYSKCGQDDYAEEVFAKAEKKNITLWNEIIATYVNQG 420
A+HAYALK ELCTNIYVEGSLVDMYSKCGQDD+AEEVFAKAEKKN+TLWNEIIATYVNQG
Sbjct: 361 AVHAYALKCELCTNIYVEGSLVDMYSKCGQDDHAEEVFAKAEKKNVTLWNEIIATYVNQG 420
Query: 421 KIDQALERFRSMQHHGLKPDVVTYNTLLAGHAKNGQKVEAYKLLSEMLQNDLAPNVVSLN 480
K QALERFRSMQHHGLKPDVVTYNTLLAG+AKNG+KVEAY+LLS+ML+ +L PNV+SLN
Sbjct: 421 KNSQALERFRSMQHHGLKPDVVTYNTLLAGYAKNGKKVEAYELLSDMLRENLVPNVISLN 480
Query: 481 VLVSGFQQSGLSYEALKLFQTKLCTGCLLNKVITLSIRPNTVTITSALAACASLNLLCKG 540
VLVSGFQ SGLSYEAL+L QT LCTG LLNKVI + P+TVTIT+ALAACASLNLL KG
Sbjct: 481 VLVSGFQNSGLSYEALELCQTMLCTGSLLNKVIAFPVIPDTVTITAALAACASLNLLHKG 540
Query: 541 KEIHGYMLRNAFEDNHFVSSALIDMYIKCGNIGSAIQVFRRIKNRNVVCWNALMAGLMKI 600
KEIHGYMLRN FE+NHF+SSALI+MY KC NI SAIQVF RIKNRNVVCWNAL+AGL++I
Sbjct: 541 KEIHGYMLRNYFENNHFISSALINMYAKCENIDSAIQVFSRIKNRNVVCWNALIAGLLRI 600
Query: 601 MQPKVAIDFFCQMLVEGTKPSSVTFSILLPALADRADLEARRQLHSYIIKSQLLESCNDL 660
MQ +VA++ FCQMLVEG KPSS TFSILLPAL++RADL+ RRQLHSYIIKSQ LES NDL
Sbjct: 601 MQHEVAVELFCQMLVEGIKPSSATFSILLPALSERADLKVRRQLHSYIIKSQHLESRNDL 660
Query: 661 ANVLSSDNFDGEIRLRGI 676
ANVLSSDNFD + L GI
Sbjct: 661 ANVLSSDNFDVGVLLHGI 675
BLAST of Lcy01g013290 vs. ExPASy TrEMBL
Match:
A0A6J1BQ73 (pentatricopeptide repeat-containing protein At1g19720-like OS=Momordica charantia OX=3673 GN=LOC111004749 PE=4 SV=1)
HSP 1 Score: 1076.2 bits (2782), Expect = 0.0e+00
Identity = 553/679 (81.44%), Postives = 584/679 (86.01%), Query Frame = 0
Query: 1 MATLVDGFLSSNNATP-SDLPSSSKLNFDLHPSFRFSRISMNVACRMHFSAVSARNRHQC 60
MATL D FLS NNA+P PSSSKLNFDLHPS FSR SMN+ CRMHF+AVSA N +
Sbjct: 1 MATLKDAFLSPNNASPVLPYPSSSKLNFDLHPSLGFSRNSMNLNCRMHFTAVSAHNPPRG 60
Query: 61 QFAPIAKSTGRNDVGFNIPIARSLALFNRN---------VQVVKLNAHRVDSLFGNNLAK 120
QF P AKS RNDVG NIPIARSL L N N VVK N HRVDSLFGN L K
Sbjct: 61 QFVPAAKSIDRNDVGSNIPIARSLVLLNSNFLSDSRQTRAHVVKSNVHRVDSLFGNKLPK 120
Query: 121 LY---VKCVDSDCKLFDEIPERTLSAYAALIRAYCRSEKWNELFAAFRSMVDEGILPDKY 180
VKCVDSDCKLFDEIPERTL AYAALIRAYCRS+KWNELFAAFRSMVDEGI PDKY
Sbjct: 121 FNAQDVKCVDSDCKLFDEIPERTLPAYAALIRAYCRSQKWNELFAAFRSMVDEGIQPDKY 180
Query: 181 LVPTILKACSRRQVVTTGKMIHGYVIRKRLVSDIFIGNALMDFYGNCGDLTSSINVFDSM 240
LVPTILKACS RQ+V TGKM+HG+VIRK VSDIF+GNALM+FYGNCGDL SSI VFDSM
Sbjct: 181 LVPTILKACSGRQLVKTGKMVHGFVIRKTFVSDIFVGNALMNFYGNCGDLRSSIVVFDSM 240
Query: 241 SEKDVVSWTALVSAYIEEGLLDEAMESFHSMQASGLKPDLISWNALVSGFARYGEIDTAL 300
SEKDVVSWTALVSAY+EEGLLDEAME FH+MQ+SGLKPDLISWNALVSGFARYGEID AL
Sbjct: 241 SEKDVVSWTALVSAYMEEGLLDEAMEVFHNMQSSGLKPDLISWNALVSGFARYGEIDIAL 300
Query: 301 EYLETMQENGLSPRVNSWNAIISGCVQNGYFKDALDVFINMLLFPENPNSVTVASILPAC 360
+YLE MQE GL+PRVNSWN IISGCVQNGYF+DALDVFINML FPENPNSVTVASILPAC
Sbjct: 301 QYLEEMQEKGLTPRVNSWNGIISGCVQNGYFRDALDVFINMLFFPENPNSVTVASILPAC 360
Query: 361 AGLRDLSLGRAIHAYALKRELCTNIYVEGSLVDMYSKCGQDDYAEEVFAKAEKKNITLWN 420
AGLRD+ LGRAIHAYALK ELC N+YVEGSLVDMYSKCGQD AE+VFA+AEKKNITLWN
Sbjct: 361 AGLRDIGLGRAIHAYALKSELCVNLYVEGSLVDMYSKCGQDYCAEKVFARAEKKNITLWN 420
Query: 421 EIIATYVNQGKIDQALERFRSMQHHGLKPDVVTYNTLLAGHAKNGQKVEAYKLLSEMLQN 480
EIIA YVNQGK+ QALERFRSMQHHGLKPDVVTYNTLLAGHAKNGQKVEAYKLLSEMLQ
Sbjct: 421 EIIAAYVNQGKVSQALERFRSMQHHGLKPDVVTYNTLLAGHAKNGQKVEAYKLLSEMLQK 480
Query: 481 DLAPNVVSLNVLVSGFQQSGLSYEALKLFQTKLCTGCLLNKVITLSIRPNTVTITSALAA 540
DL PNVVSLNVLVSGFQQ GLSYEALKLF+T LCTGCLLNKVITL IRPNTVTIT+ALAA
Sbjct: 481 DLTPNVVSLNVLVSGFQQFGLSYEALKLFRTMLCTGCLLNKVITLPIRPNTVTITAALAA 540
Query: 541 CASLNLLCKGKEIHGYMLRNAFEDNHFVSSALIDMYIKCGNIGSAIQVFRRIKNRNVVCW 600
CA LNL +GKEIHGYMLRN F DNHF+SSALID YIKC +I SAI+VFRRIKNRNVVCW
Sbjct: 541 CADLNLSHQGKEIHGYMLRNGFHDNHFISSALIDTYIKCEDIDSAIRVFRRIKNRNVVCW 600
Query: 601 NALMAGLMKIMQPKVAIDFFCQMLVEGTKPSSVTFSILLPALADRADLEARRQLHSYIIK 660
NAL+AG MK QPKVAI+ FC+MLVEG KPSSVT SIL PAL DL+ RRQLHSYI K
Sbjct: 601 NALIAGHMKERQPKVAIELFCEMLVEGIKPSSVTLSILPPALDLGVDLKVRRQLHSYITK 660
Query: 661 SQLLESCNDLANVLSSDNF 667
SQLLE CNDLANV S F
Sbjct: 661 SQLLEWCNDLANVSSFGKF 679
BLAST of Lcy01g013290 vs. ExPASy TrEMBL
Match:
A0A1S3BDB0 (pentatricopeptide repeat-containing protein At1g19720-like OS=Cucumis melo OX=3656 GN=LOC103488425 PE=4 SV=1)
HSP 1 Score: 1075.8 bits (2781), Expect = 0.0e+00
Identity = 547/678 (80.68%), Postives = 597/678 (88.05%), Query Frame = 0
Query: 1 MATLVDGFLSSNNATPSDLPSSSKLNFDLHPSFRFSRISMNVACRMHFSAVSARNRHQCQ 60
MAT +DGF+SSNNA+P LPS K +FDL+P+ FSR SMNVACRMHF+AV ARNR CQ
Sbjct: 1 MATPLDGFVSSNNASPR-LPSFPKFHFDLYPNSSFSRNSMNVACRMHFNAVWARNRPNCQ 60
Query: 61 FAPIAKSTGRNDVGFNIPIARSLALFNRNVQVVKLNAHRVDSLFGNNLAKLY---VKCVD 120
F+PIA T + G N+PI S LF+ N QVVKLNA RVD+LFG L K Y VKCVD
Sbjct: 61 FSPIAIRT--DCEGVNVPIPGSFVLFDHNSQVVKLNACRVDNLFGKKLTKFYVKDVKCVD 120
Query: 121 SDCKLFDEIPERTLSAYAALIRAYCRSEKWNELFAAFRSMVDEGILPDKYLVPTILKACS 180
D K+FDEIPERTL YAALIRAYCRSEKWNELFAAFRSMVDEGILPDKYLVPT+LKACS
Sbjct: 121 GDSKVFDEIPERTLPTYAALIRAYCRSEKWNELFAAFRSMVDEGILPDKYLVPTVLKACS 180
Query: 181 RRQVVTTGKMIHGYVIRKRLVSDIFIGNALMDFYGNCGDLTSSINVFDSMSEKDVVSWTA 240
RRQ+V TGKM+HGY IRKR+VSDI IGNALMDFYGNC DL SSINVFDSMSEKDVVSWTA
Sbjct: 181 RRQMVKTGKMVHGYAIRKRMVSDIVIGNALMDFYGNCRDLGSSINVFDSMSEKDVVSWTA 240
Query: 241 LVSAYIEEGLLDEAMESFHSMQASGLKPDLISWNALVSGFARYGEIDTALEYLETMQENG 300
LVSAYIEEGLL+EAM+ FHSMQ+SGLKPDLISWNALVSGFARYGE +TAL YLE MQE G
Sbjct: 241 LVSAYIEEGLLNEAMKVFHSMQSSGLKPDLISWNALVSGFARYGETNTALTYLEAMQEEG 300
Query: 301 LSPRVNSWNAIISGCVQNGYFKDALDVFINMLLFPENPNSVTVASILPACAGLRDLSLGR 360
L PRVNSWN +ISGCVQNGYFKDALDVFINMLLFPENPNSVTVASILPACAGLR+L LGR
Sbjct: 301 LRPRVNSWNGVISGCVQNGYFKDALDVFINMLLFPENPNSVTVASILPACAGLRNLGLGR 360
Query: 361 AIHAYALKRELCTNIYVEGSLVDMYSKCGQDDYAEEVFAKAEKKNITLWNEIIATYVNQG 420
A+HAYALK ELCTNIYVEGSLVDMYSKCGQDD+AEEVFAKAEKKN+TLWNEIIATYVNQG
Sbjct: 361 AVHAYALKCELCTNIYVEGSLVDMYSKCGQDDHAEEVFAKAEKKNVTLWNEIIATYVNQG 420
Query: 421 KIDQALERFRSMQHHGLKPDVVTYNTLLAGHAKNGQKVEAYKLLSEMLQNDLAPNVVSLN 480
K QALERFRSMQHHGLKPDVVTYNTLLAG+AKNG+KVEAY+LLS+ML+ +L PNV+SLN
Sbjct: 421 KNSQALERFRSMQHHGLKPDVVTYNTLLAGYAKNGKKVEAYELLSDMLRENLVPNVISLN 480
Query: 481 VLVSGFQQSGLSYEALKLFQTKLCTGCLLNKVITLSIRPNTVTITSALAACASLNLLCKG 540
VLVSGFQ SGLSYEAL+L QT LCTG LLNK I + P+TVTIT+ALAACASLNLL KG
Sbjct: 481 VLVSGFQNSGLSYEALELCQTMLCTGSLLNKAIAFPVIPDTVTITAALAACASLNLLHKG 540
Query: 541 KEIHGYMLRNAFEDNHFVSSALIDMYIKCGNIGSAIQVFRRIKNRNVVCWNALMAGLMKI 600
KEIHGYMLRN FE+NHF+SSALI+MY KC NI SAIQVF RIKNRNVVCWNAL+AGL++I
Sbjct: 541 KEIHGYMLRNYFENNHFISSALINMYAKCENIDSAIQVFSRIKNRNVVCWNALIAGLLRI 600
Query: 601 MQPKVAIDFFCQMLVEGTKPSSVTFSILLPALADRADLEARRQLHSYIIKSQLLESCNDL 660
MQ +VA++ FCQMLVEG KPSS TFSILLPAL++RADL+ RRQLHSYIIKSQ LES NDL
Sbjct: 601 MQHEVAVELFCQMLVEGIKPSSATFSILLPALSERADLKVRRQLHSYIIKSQHLESRNDL 660
Query: 661 ANVLSSDNFDGEIRLRGI 676
ANVLSSDNFD + L GI
Sbjct: 661 ANVLSSDNFDVGVLLHGI 675
BLAST of Lcy01g013290 vs. ExPASy TrEMBL
Match:
A0A0A0KFW8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G399730 PE=4 SV=1)
HSP 1 Score: 1074.3 bits (2777), Expect = 2.5e-310
Identity = 548/678 (80.83%), Postives = 593/678 (87.46%), Query Frame = 0
Query: 1 MATLVDGFLSSNNATPSDLPSSSKLNFDLHPSFRFSRISMNVACRMHFSAVSARNRHQCQ 60
MAT V GF SSNNA+ LPS K +FDL+P+ FSR SMNVACRMHF AVSA NR CQ
Sbjct: 1 MATPVYGFASSNNAS-LRLPSFPKFHFDLYPNSSFSRNSMNVACRMHFHAVSAHNRPNCQ 60
Query: 61 FAPIAKSTGRNDVGFNIPIARSLALFNRNVQVVKLNAHRVDSLFGNNLAKLY---VKCVD 120
F+PIA T RN G N+PI RS ALF+ + QVVKLN RVD+LFG L K Y VKCVD
Sbjct: 61 FSPIAIRTDRNCEGVNVPIPRSFALFDHSAQVVKLNDCRVDNLFGKKLTKFYVKDVKCVD 120
Query: 121 SDCKLFDEIPERTLSAYAALIRAYCRSEKWNELFAAFRSMVDEGILPDKYLVPTILKACS 180
SD K+FDEIPERTL AYAALIRAYCRSEKWNELFAAFRSMVDEGILPDKYLVPTILKACS
Sbjct: 121 SDSKVFDEIPERTLPAYAALIRAYCRSEKWNELFAAFRSMVDEGILPDKYLVPTILKACS 180
Query: 181 RRQVVTTGKMIHGYVIRKRLVSDIFIGNALMDFYGNCGDLTSSINVFDSMSEKDVVSWTA 240
RRQ+V TGKM HGY IRKR+VSDI I NALMDFYGNCGDL+SSINVFDSMSEKDVVSWTA
Sbjct: 181 RRQMVKTGKMAHGYAIRKRMVSDIVIENALMDFYGNCGDLSSSINVFDSMSEKDVVSWTA 240
Query: 241 LVSAYIEEGLLDEAMESFHSMQASGLKPDLISWNALVSGFARYGEIDTALEYLETMQENG 300
LVSAYIEEGLL+EAME FHSMQ+SGLKPDLISWNALVSGFARYGE +TAL YLE MQE G
Sbjct: 241 LVSAYIEEGLLNEAMEVFHSMQSSGLKPDLISWNALVSGFARYGETNTALTYLEAMQEEG 300
Query: 301 LSPRVNSWNAIISGCVQNGYFKDALDVFINMLLFPENPNSVTVASILPACAGLRDLSLGR 360
L PRVNSWN +ISGCVQNGYFKDALDVFINMLLFPENPNSVTVASILPACAGLRDL LGR
Sbjct: 301 LRPRVNSWNGVISGCVQNGYFKDALDVFINMLLFPENPNSVTVASILPACAGLRDLGLGR 360
Query: 361 AIHAYALKRELCTNIYVEGSLVDMYSKCGQDDYAEEVFAKAEKKNITLWNEIIATYVNQG 420
A+HAYALK ELCTNIYVEGSLVDMYSKCGQDD AEE+FAKAEKKNITLWNEIIATY+NQG
Sbjct: 361 AVHAYALKCELCTNIYVEGSLVDMYSKCGQDDRAEEIFAKAEKKNITLWNEIIATYMNQG 420
Query: 421 KIDQALERFRSMQHHGLKPDVVTYNTLLAGHAKNGQKVEAYKLLSEMLQNDLAPNVVSLN 480
K ALE FRSMQHHGLKPDVVTYNTLLAG+AKNGQKVEAY+LLS+MLQ +L PNV+SLN
Sbjct: 421 KNSWALEHFRSMQHHGLKPDVVTYNTLLAGYAKNGQKVEAYELLSDMLQENLVPNVISLN 480
Query: 481 VLVSGFQQSGLSYEALKLFQTKLCTGCLLNKVITLSIRPNTVTITSALAACASLNLLCKG 540
VLVSGFQQSGL+YEAL+L QT LCTG LLNK I + PNTVT+T+ALAACASLNLL KG
Sbjct: 481 VLVSGFQQSGLNYEALELCQTMLCTGSLLNKTIAFPVIPNTVTLTAALAACASLNLLHKG 540
Query: 541 KEIHGYMLRNAFEDNHFVSSALIDMYIKCGNIGSAIQVFRRIKNRNVVCWNALMAGLMKI 600
KEIHGYMLRN F +N+F+SSALI+MY KCG+I SAIQVF RIKNRNVVCWNAL+AGL++
Sbjct: 541 KEIHGYMLRNYFVNNYFISSALINMYAKCGDIDSAIQVFSRIKNRNVVCWNALIAGLLRT 600
Query: 601 MQPKVAIDFFCQMLVEGTKPSSVTFSILLPALADRADLEARRQLHSYIIKSQLLESCNDL 660
MQ K+A++ FCQMLVEG KPSS TFSILLPAL++RADL+ RRQLHSYIIKSQ LES NDL
Sbjct: 601 MQHKMAVELFCQMLVEGIKPSSATFSILLPALSERADLKVRRQLHSYIIKSQHLESRNDL 660
Query: 661 ANVLSSDNFDGEIRLRGI 676
ANVLSSDN D + L GI
Sbjct: 661 ANVLSSDNVDVGVLLHGI 677
BLAST of Lcy01g013290 vs. ExPASy TrEMBL
Match:
A0A6J1K3Z4 (pentatricopeptide repeat-containing protein At1g19720-like OS=Cucurbita maxima OX=3661 GN=LOC111492109 PE=4 SV=1)
HSP 1 Score: 1029.2 bits (2660), Expect = 7.5e-297
Identity = 521/639 (81.53%), Postives = 563/639 (88.11%), Query Frame = 0
Query: 40 MNVACRMHFSAVSARNRHQCQFAPIAKSTGRNDVGFNIPIARSLALFNRNVQVVKLNAHR 99
MNVACRMH +A+SA NR QC+FAP+AK ND G N+PIARS ALFNRNVQ VKLNA R
Sbjct: 1 MNVACRMHSTAISAHNRSQCRFAPVAKCPDSNDAGSNVPIARSFALFNRNVQFVKLNARR 60
Query: 100 VDSLFGNNLAKLYVK---CVDSDCKLFDEIPERTLSAYAALIRAYCRSEKWNELFAAFRS 159
VDSL GN LAK+ K CVDSD K+FDE+PER L AY ALIRAYCRSEKWNELFAAF S
Sbjct: 61 VDSLIGNKLAKVCAKCATCVDSDRKVFDEMPERPLPAYTALIRAYCRSEKWNELFAAFGS 120
Query: 160 MVDEGILPDKYLVPTILKACSRRQVVTTGKMIHGYVIRKRLVSDIFIGNALMDFYGNCGD 219
MV+EGILPDKYLVPTILKACS+ Q V TGKMIHGY IRKRLVSDIFIGNALMDFYGNCGD
Sbjct: 121 MVEEGILPDKYLVPTILKACSKIQAVKTGKMIHGYAIRKRLVSDIFIGNALMDFYGNCGD 180
Query: 220 LTSSINVFDSMSEKDVVSWTALVSAYIEEGLLDEAMESFHSMQASGLKPDLISWNALVSG 279
L SINVFDSMSEKDVVSWTALVSAY+EEGLLDEAME+FHSMQ+SGLKPDLISWNALVSG
Sbjct: 181 LRFSINVFDSMSEKDVVSWTALVSAYMEEGLLDEAMEAFHSMQSSGLKPDLISWNALVSG 240
Query: 280 FARYGEIDTALEYLETMQENGLSPRVNSWNAIISGCVQNGYFKDALDVFINMLLFPENPN 339
FAR+G+I TAL+YLE MQE GLSPRVNSWN +ISGCV NGYFKDAL VFINMLLFPENPN
Sbjct: 241 FARHGKIGTALKYLEAMQEQGLSPRVNSWNGVISGCVLNGYFKDALYVFINMLLFPENPN 300
Query: 340 SVTVASILPACAGLRDLSLGRAIHAYALKRELCTNIYVEGSLVDMYSKCGQDDYAEEVFA 399
SVTVAS+LPACAGLR L LGRA+HAYALK ELCTNIYVEGSLV+MYSKCGQDDYAEE+FA
Sbjct: 301 SVTVASVLPACAGLRYLGLGRAVHAYALKCELCTNIYVEGSLVNMYSKCGQDDYAEEIFA 360
Query: 400 KAEKKNITLWNEIIATYVNQGKIDQALERFRSMQHHGLKPDVVTYNTLLAGHAKNGQKVE 459
KAEKKNITLWNEIIATYVNQG+ QALERFRSMQHHGL+PDVVTYNTLLAG+AKNGQKVE
Sbjct: 361 KAEKKNITLWNEIIATYVNQGRTSQALERFRSMQHHGLRPDVVTYNTLLAGYAKNGQKVE 420
Query: 460 AYKLLSEMLQNDLAPNVVSLNVLVSGFQQSGLSYEALKLFQTKLCTGCLLNKVITLSIRP 519
AY LL+EMLQ DLAPNVVSLN LVSGFQQSGLSYEAL+LFQT L T CL++KVIT IRP
Sbjct: 421 AYNLLTEMLQKDLAPNVVSLNALVSGFQQSGLSYEALELFQTMLYTACLVDKVITSPIRP 480
Query: 520 N-TVTITSALAACASLNLLCKGKEIHGYMLRNAFEDNHFVSSALIDMYIKCGNIGSAIQV 579
N +TIT+ALAACASLNLL KGKEIHGYMLRN FEDNH VSSALIDMY KC I S IQV
Sbjct: 481 NIVITITAALAACASLNLLHKGKEIHGYMLRNGFEDNHIVSSALIDMYSKCECIDSVIQV 540
Query: 580 FRRIKNRNVVCWNALMAGLMKIMQPKVAIDFFCQMLVEGTKPSSVTFSILLPALADRADL 639
F IKNRN VCWNAL+AG ++MQPK+A++ FCQMLVEG KPSS +FSILLPALA R DL
Sbjct: 541 FGGIKNRNEVCWNALIAGFRRVMQPKMAVELFCQMLVEGIKPSSDSFSILLPALA-RTDL 600
Query: 640 EARRQLHSYIIKSQLLESCNDLANVLSSDNFDGEIRLRG 675
RRQLHSYIIKSQL+ESC+DL+ VLSS+ FDG + L G
Sbjct: 601 IMRRQLHSYIIKSQLVESCDDLSYVLSSNEFDGGVMLHG 638
BLAST of Lcy01g013290 vs. NCBI nr
Match:
XP_038884429.1 (pentatricopeptide repeat-containing protein At1g19720-like [Benincasa hispida])
HSP 1 Score: 1124.0 bits (2906), Expect = 0.0e+00
Identity = 570/676 (84.32%), Postives = 605/676 (89.50%), Query Frame = 0
Query: 3 TLVDGFLSSNNATPSDLPSSSKLNFDLHPSFRFSRISMNVACRMHFSAVSARNRHQCQFA 62
T +DGF+SS+NA+P+ LPSS K NFDL PSFR SR SM VACRMHF+A+SA +R Q QF+
Sbjct: 6 TYIDGFVSSSNASPA-LPSSFKFNFDLQPSFRLSRNSMYVACRMHFTAISAHDRPQGQFS 65
Query: 63 PIAKSTGRNDVGFNIPIARSLALFNRNVQVVKLNAHRVDSLFGNNLAKLYVK---CVDSD 122
PIAK T RN GF +PIARS LFN N QVVKLNA RVD+LFG LA Y K CVDSD
Sbjct: 66 PIAKCTDRNYGGFKVPIARSFGLFNHNAQVVKLNACRVDNLFGKKLATFYAKDVNCVDSD 125
Query: 123 CKLFDEIPERTLSAYAALIRAYCRSEKWNELFAAFRSMVDEGILPDKYLVPTILKACSRR 182
KLFDEIPERTLSAY+ALIRAYCRSEKWNELFAAFRSMVDEGILP KYLVPTILKACSRR
Sbjct: 126 SKLFDEIPERTLSAYSALIRAYCRSEKWNELFAAFRSMVDEGILPGKYLVPTILKACSRR 185
Query: 183 QVVTTGKMIHGYVIRKRLVSDIFIGNALMDFYGNCGDLTSSINVFDSMSEKDVVSWTALV 242
Q+V TGKM+HGY IRKRLVSDIFIGNAL+D YGNCGDL SINVFDSMSEKDVVSWTALV
Sbjct: 186 QMVKTGKMVHGYAIRKRLVSDIFIGNALIDLYGNCGDLRFSINVFDSMSEKDVVSWTALV 245
Query: 243 SAYIEEGLLDEAMESFHSMQASGLKPDLISWNALVSGFARYGEIDTALEYLETMQENGLS 302
SAYIEEGLLDE ME FHSMQ+SGLKPDLISWNALVSGFARYGE +TAL YLE MQE GLS
Sbjct: 246 SAYIEEGLLDEVMEVFHSMQSSGLKPDLISWNALVSGFARYGETNTALTYLEAMQEEGLS 305
Query: 303 PRVNSWNAIISGCVQNGYFKDALDVFINMLLFPENPNSVTVASILPACAGLRDLSLGRAI 362
PRVNSWN +ISG VQNGYFKDALDVFINMLLF ENPNSVTVASILPACAGLRDL LGRAI
Sbjct: 306 PRVNSWNGVISGFVQNGYFKDALDVFINMLLFAENPNSVTVASILPACAGLRDLGLGRAI 365
Query: 363 HAYALKRELCTNIYVEGSLVDMYSKCGQDDYAEEVFAKAEKKNITLWNEIIATYVNQGKI 422
HAYALK ELCTNIYVEGSLVDMYSKCGQDDYAEEVFAKAEKKNITLWNEIIATYVNQ K
Sbjct: 366 HAYALKCELCTNIYVEGSLVDMYSKCGQDDYAEEVFAKAEKKNITLWNEIIATYVNQEKT 425
Query: 423 DQALERFRSMQHHGLKPDVVTYNTLLAGHAKNGQKVEAYKLLSEMLQNDLAPNVVSLNVL 482
QALE FRS+QHHGLKPDVVTYNTLLAGHAKNGQKVEAYKLLSEMLQ DLAPNVVSLNVL
Sbjct: 426 SQALECFRSLQHHGLKPDVVTYNTLLAGHAKNGQKVEAYKLLSEMLQKDLAPNVVSLNVL 485
Query: 483 VSGFQQSGLSYEALKLFQTKLCTGCLLNKVITLSIRPNTVTITSALAACASLNLLCKGKE 542
VSGFQQSGLSYEAL+LFQT LC GCL NK+IT IRP+TVTIT+AL ACASLNLL KGKE
Sbjct: 486 VSGFQQSGLSYEALELFQTMLCKGCLHNKMITFPIRPDTVTITAALVACASLNLLHKGKE 545
Query: 543 IHGYMLRNAFEDNHFVSSALIDMYIKCGNIGSAIQVFRRIKNRNVVCWNALMAGLMKIMQ 602
IHGYM RN+FEDNHF+SSALIDMY KC NI AIQVFR IKNRNVVCWNAL+AGLM+IMQ
Sbjct: 546 IHGYMFRNSFEDNHFISSALIDMYAKCENIDLAIQVFRSIKNRNVVCWNALIAGLMRIMQ 605
Query: 603 PKVAIDFFCQMLVEGTKPSSVTFSILLPALADRADLEARRQLHSYIIKSQLLESCNDLAN 662
PK+A++ FCQMLVEG KPSSVTFSILLPALA++ADL+ARRQLHSYIIKS+ LESCNDLAN
Sbjct: 606 PKMAVELFCQMLVEGLKPSSVTFSILLPALAEKADLKARRQLHSYIIKSRYLESCNDLAN 665
Query: 663 VLSSDNFDGEIRLRGI 676
VLSSDNFDG + L GI
Sbjct: 666 VLSSDNFDGGVLLHGI 680
BLAST of Lcy01g013290 vs. NCBI nr
Match:
KAG6598662.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 1091.6 bits (2822), Expect = 0.0e+00
Identity = 554/677 (81.83%), Postives = 598/677 (88.33%), Query Frame = 0
Query: 1 MATLVDGFLSSNNATPSDLPSSSKLNFDLHPSFRFSRISMNVACRMHFSAVSARNRHQCQ 60
MATLVDGFLSSNN +P+ LPSSSKLN DL+PSFRFSR SMNVACRMH +A+SA NR QC+
Sbjct: 1 MATLVDGFLSSNNTSPALLPSSSKLNVDLYPSFRFSRNSMNVACRMHSTAISAHNRPQCR 60
Query: 61 FAPIAKSTGRNDVGFNIPIARSLALFNRNVQVVKLNAHRVDSLFGNNLAKLYVK---CVD 120
FAP+AK ND G N+PIARS ALFNRNVQ VKLNA RVDSL GNNLAK K CVD
Sbjct: 61 FAPVAKCPDSNDAGSNVPIARSFALFNRNVQDVKLNARRVDSLIGNNLAKFCTKCATCVD 120
Query: 121 SDCKLFDEIPERTLSAYAALIRAYCRSEKWNELFAAFRSMVDEGILPDKYLVPTILKACS 180
SD K+FDE+PER L AY ALIRAYCRSEKWNELFAAF SMV+EGILPDKYLVPTILKACS
Sbjct: 121 SDRKVFDEMPERPLPAYTALIRAYCRSEKWNELFAAFGSMVEEGILPDKYLVPTILKACS 180
Query: 181 RRQVVTTGKMIHGYVIRKRLVSDIFIGNALMDFYGNCGDLTSSINVFDSMSEKDVVSWTA 240
RQ V TGKM+HGY IRKRLVSDIFIGNALMDFYGNCGDL SINVFDSMSEKDVVSWTA
Sbjct: 181 IRQAVKTGKMMHGYAIRKRLVSDIFIGNALMDFYGNCGDLRFSINVFDSMSEKDVVSWTA 240
Query: 241 LVSAYIEEGLLDEAMESFHSMQASGLKPDLISWNALVSGFARYGEIDTALEYLETMQENG 300
LVSAY+EEGLLDEAME+FHSMQ+SGLKPDLISWNALVSGFAR+G+I TAL+YLE MQE G
Sbjct: 241 LVSAYMEEGLLDEAMEAFHSMQSSGLKPDLISWNALVSGFARHGKIGTALKYLEAMQEQG 300
Query: 301 LSPRVNSWNAIISGCVQNGYFKDALDVFINMLLFPENPNSVTVASILPACAGLRDLSLGR 360
LSPRVNSWN +ISGCV NG+FKDAL VFINMLLFPENPNSVTVAS+LPACAGLR L LGR
Sbjct: 301 LSPRVNSWNGVISGCVLNGFFKDALYVFINMLLFPENPNSVTVASVLPACAGLRYLGLGR 360
Query: 361 AIHAYALKRELCTNIYVEGSLVDMYSKCGQDDYAEEVFAKAEKKNITLWNEIIATYVNQG 420
A+HAYALK ELCTNIYVEGSLV+MYSKCGQDDYAEE+FAKAEKKNITLWNEIIATYVNQG
Sbjct: 361 AVHAYALKCELCTNIYVEGSLVNMYSKCGQDDYAEEIFAKAEKKNITLWNEIIATYVNQG 420
Query: 421 KIDQALERFRSMQHHGLKPDVVTYNTLLAGHAKNGQKVEAYKLLSEMLQNDLAPNVVSLN 480
+ QALERFRSMQHHGL+PDVVTYNTLLAG+AKNGQKVEAY LL+EMLQ DLAPNVVSLN
Sbjct: 421 RTSQALERFRSMQHHGLRPDVVTYNTLLAGYAKNGQKVEAYNLLTEMLQKDLAPNVVSLN 480
Query: 481 VLVSGFQQSGLSYEALKLFQTKLCTGCLLNKVITLSIRPNTVTITSALAACASLNLLCKG 540
VLVSGFQQSGLSYEAL+LFQT L T CL++KVIT IRPN VTIT+ LAACASLNLL KG
Sbjct: 481 VLVSGFQQSGLSYEALELFQTMLYTACLVDKVITSPIRPNIVTITAVLAACASLNLLHKG 540
Query: 541 KEIHGYMLRNAFEDNHFVSSALIDMYIKCGNIGSAIQVFRRIKNRNVVCWNALMAGLMKI 600
KEIHGYMLRN FED+H VSSALIDMY KC I S I+VF IKNRN VCWNAL+AG ++
Sbjct: 541 KEIHGYMLRNGFEDDHVVSSALIDMYSKCDCIDSVIRVFGGIKNRNEVCWNALIAGFRRV 600
Query: 601 MQPKVAIDFFCQMLVEGTKPSSVTFSILLPALADRADLEARRQLHSYIIKSQLLESCNDL 660
MQPK+A++ FCQMLVEG KPSS TFSIL PALA R DL RRQLHSYIIKSQL+ESC+DL
Sbjct: 601 MQPKMAVELFCQMLVEGIKPSSDTFSILFPALA-RTDLIMRRQLHSYIIKSQLVESCDDL 660
Query: 661 ANVLSSDNFDGEIRLRG 675
ANVLSS+ FDG + L G
Sbjct: 661 ANVLSSNEFDGGVLLHG 676
BLAST of Lcy01g013290 vs. NCBI nr
Match:
KAG7029606.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 1087.4 bits (2811), Expect = 0.0e+00
Identity = 552/677 (81.54%), Postives = 596/677 (88.04%), Query Frame = 0
Query: 1 MATLVDGFLSSNNATPSDLPSSSKLNFDLHPSFRFSRISMNVACRMHFSAVSARNRHQCQ 60
MATLVDGFLSSNN +P+ LPSSSKLN DL+PSFRFSR SMNVACRMH +A+SA NR QC+
Sbjct: 1 MATLVDGFLSSNNTSPALLPSSSKLNVDLYPSFRFSRNSMNVACRMHSTAISAHNRPQCR 60
Query: 61 FAPIAKSTGRNDVGFNIPIARSLALFNRNVQVVKLNAHRVDSLFGNNLAKLYVK---CVD 120
FAP+AK ND G N+PIARS ALFNRNVQ VKLNA RVDSL GNNLAK K CVD
Sbjct: 61 FAPVAKCPDSNDAGSNVPIARSFALFNRNVQDVKLNARRVDSLIGNNLAKFCTKCATCVD 120
Query: 121 SDCKLFDEIPERTLSAYAALIRAYCRSEKWNELFAAFRSMVDEGILPDKYLVPTILKACS 180
SD K+FDE+PER L AY ALIRAYCRSEKWNELFAAF SMV+EGILPDKYLVPTILKACS
Sbjct: 121 SDRKVFDEMPERPLPAYTALIRAYCRSEKWNELFAAFGSMVEEGILPDKYLVPTILKACS 180
Query: 181 RRQVVTTGKMIHGYVIRKRLVSDIFIGNALMDFYGNCGDLTSSINVFDSMSEKDVVSWTA 240
RQ V TGKM+HGY IRKRLVSDIFIGNALMDFYGNCGDL SINVFDSMSEKDVVSWTA
Sbjct: 181 IRQAVKTGKMMHGYAIRKRLVSDIFIGNALMDFYGNCGDLRFSINVFDSMSEKDVVSWTA 240
Query: 241 LVSAYIEEGLLDEAMESFHSMQASGLKPDLISWNALVSGFARYGEIDTALEYLETMQENG 300
LVSAY+EEGLLDEAME+FHSMQ+SGLKPDLISWNALVSGFAR+G+I TAL+YLE MQE G
Sbjct: 241 LVSAYMEEGLLDEAMEAFHSMQSSGLKPDLISWNALVSGFARHGKIGTALKYLEAMQEQG 300
Query: 301 LSPRVNSWNAIISGCVQNGYFKDALDVFINMLLFPENPNSVTVASILPACAGLRDLSLGR 360
LSPRVNSWN +ISGCV NG+FKDAL VFINMLLFPENPNSVTVAS+LPACAGLR L LGR
Sbjct: 301 LSPRVNSWNGVISGCVLNGFFKDALYVFINMLLFPENPNSVTVASVLPACAGLRYLGLGR 360
Query: 361 AIHAYALKRELCTNIYVEGSLVDMYSKCGQDDYAEEVFAKAEKKNITLWNEIIATYVNQG 420
A+HAY LK ELCTNIYVEGSLV+MYSKCGQDDYAEE+FAKAEKKNITLWNEIIATYVNQG
Sbjct: 361 AVHAYTLKCELCTNIYVEGSLVNMYSKCGQDDYAEEIFAKAEKKNITLWNEIIATYVNQG 420
Query: 421 KIDQALERFRSMQHHGLKPDVVTYNTLLAGHAKNGQKVEAYKLLSEMLQNDLAPNVVSLN 480
+ QALERFRSMQHHGL+PDVVTYNTLLAG+AKNGQKVEAY LL+EMLQ DLAPNVVSLN
Sbjct: 421 RTSQALERFRSMQHHGLRPDVVTYNTLLAGYAKNGQKVEAYNLLTEMLQKDLAPNVVSLN 480
Query: 481 VLVSGFQQSGLSYEALKLFQTKLCTGCLLNKVITLSIRPNTVTITSALAACASLNLLCKG 540
VLVSGFQQSGLSYEAL+LFQT L T CL++KVIT IRPN VTIT+ LAACASLNLL KG
Sbjct: 481 VLVSGFQQSGLSYEALELFQTMLYTACLVDKVITSPIRPNIVTITAVLAACASLNLLHKG 540
Query: 541 KEIHGYMLRNAFEDNHFVSSALIDMYIKCGNIGSAIQVFRRIKNRNVVCWNALMAGLMKI 600
KEIHGYMLRN FED+H VSSALIDMY KC I S I+VF IKNRN VCWNAL+AG ++
Sbjct: 541 KEIHGYMLRNGFEDDHVVSSALIDMYSKCDCIDSVIRVFGGIKNRNEVCWNALIAGFRRV 600
Query: 601 MQPKVAIDFFCQMLVEGTKPSSVTFSILLPALADRADLEARRQLHSYIIKSQLLESCNDL 660
MQPK+A++ FCQMLVEG KPSS TFSIL PALA R DL RRQLHSYIIKSQL+ SC+DL
Sbjct: 601 MQPKMAVELFCQMLVEGIKPSSDTFSILFPALA-RTDLIMRRQLHSYIIKSQLVGSCDDL 660
Query: 661 ANVLSSDNFDGEIRLRG 675
ANVLSS+ FDG + L G
Sbjct: 661 ANVLSSNEFDGGVLLHG 676
BLAST of Lcy01g013290 vs. NCBI nr
Match:
KAA0064811.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])
HSP 1 Score: 1077.4 bits (2785), Expect = 0.0e+00
Identity = 548/678 (80.83%), Postives = 597/678 (88.05%), Query Frame = 0
Query: 1 MATLVDGFLSSNNATPSDLPSSSKLNFDLHPSFRFSRISMNVACRMHFSAVSARNRHQCQ 60
MAT +DGF+SSNNA+P LPS K +FDL+P+ FSR SMNVACRMHF+AV ARNR CQ
Sbjct: 1 MATPLDGFVSSNNASPR-LPSFPKFHFDLYPNSSFSRNSMNVACRMHFNAVWARNRPNCQ 60
Query: 61 FAPIAKSTGRNDVGFNIPIARSLALFNRNVQVVKLNAHRVDSLFGNNLAKLY---VKCVD 120
F+PIA T + G N+PI S LFN N QVVKLNA RVD+LFG L K Y VKCVD
Sbjct: 61 FSPIAIRT--DCEGVNVPIPGSFVLFNHNSQVVKLNACRVDNLFGKKLTKFYVKDVKCVD 120
Query: 121 SDCKLFDEIPERTLSAYAALIRAYCRSEKWNELFAAFRSMVDEGILPDKYLVPTILKACS 180
D K+FDEIPER L YAALIRAYCRSEKWNELFAAFRSMVDEGILPDKYLVPT+LKACS
Sbjct: 121 GDSKVFDEIPERALPTYAALIRAYCRSEKWNELFAAFRSMVDEGILPDKYLVPTVLKACS 180
Query: 181 RRQVVTTGKMIHGYVIRKRLVSDIFIGNALMDFYGNCGDLTSSINVFDSMSEKDVVSWTA 240
RRQ+V TGKM+HGY IRKR+VSDI IGNALMDFYGNC DL SSINVFDSMSEKDVVSWTA
Sbjct: 181 RRQMVKTGKMVHGYAIRKRMVSDIVIGNALMDFYGNCRDLGSSINVFDSMSEKDVVSWTA 240
Query: 241 LVSAYIEEGLLDEAMESFHSMQASGLKPDLISWNALVSGFARYGEIDTALEYLETMQENG 300
LVSAYIEEGLL+EAM+ FHSMQ+SGLKPDLISWNALVSGFARYGE +TAL YLE MQE G
Sbjct: 241 LVSAYIEEGLLNEAMKVFHSMQSSGLKPDLISWNALVSGFARYGETNTALTYLEAMQEEG 300
Query: 301 LSPRVNSWNAIISGCVQNGYFKDALDVFINMLLFPENPNSVTVASILPACAGLRDLSLGR 360
L PRVNSWN +ISGCVQNGYFKDALDVFINMLLFPENPNSVTVASILPACAGLR+L LGR
Sbjct: 301 LRPRVNSWNGVISGCVQNGYFKDALDVFINMLLFPENPNSVTVASILPACAGLRNLGLGR 360
Query: 361 AIHAYALKRELCTNIYVEGSLVDMYSKCGQDDYAEEVFAKAEKKNITLWNEIIATYVNQG 420
A+HAYALK ELCTNIYVEGSLVDMYSKCGQDD+AEEVFAKAEKKN+TLWNEIIATYVNQG
Sbjct: 361 AVHAYALKCELCTNIYVEGSLVDMYSKCGQDDHAEEVFAKAEKKNVTLWNEIIATYVNQG 420
Query: 421 KIDQALERFRSMQHHGLKPDVVTYNTLLAGHAKNGQKVEAYKLLSEMLQNDLAPNVVSLN 480
K QALERFRSMQHHGLKPDVVTYNTLLAG+AKNG+KVEAY+LLS+ML+ +L PNV+SLN
Sbjct: 421 KNSQALERFRSMQHHGLKPDVVTYNTLLAGYAKNGKKVEAYELLSDMLRENLVPNVISLN 480
Query: 481 VLVSGFQQSGLSYEALKLFQTKLCTGCLLNKVITLSIRPNTVTITSALAACASLNLLCKG 540
VLVSGFQ SGLSYEAL+L QT LCTG LLNKVI + P+TVTIT+ALAACASLNLL KG
Sbjct: 481 VLVSGFQNSGLSYEALELCQTMLCTGSLLNKVIAFPVIPDTVTITAALAACASLNLLHKG 540
Query: 541 KEIHGYMLRNAFEDNHFVSSALIDMYIKCGNIGSAIQVFRRIKNRNVVCWNALMAGLMKI 600
KEIHGYMLRN FE+NHF+SSALI+MY KC NI SAIQVF RIKNRNVVCWNAL+AGL++I
Sbjct: 541 KEIHGYMLRNYFENNHFISSALINMYAKCENIDSAIQVFSRIKNRNVVCWNALIAGLLRI 600
Query: 601 MQPKVAIDFFCQMLVEGTKPSSVTFSILLPALADRADLEARRQLHSYIIKSQLLESCNDL 660
MQ +VA++ FCQMLVEG KPSS TFSILLPAL++RADL+ RRQLHSYIIKSQ LES NDL
Sbjct: 601 MQHEVAVELFCQMLVEGIKPSSATFSILLPALSERADLKVRRQLHSYIIKSQHLESRNDL 660
Query: 661 ANVLSSDNFDGEIRLRGI 676
ANVLSSDNFD + L GI
Sbjct: 661 ANVLSSDNFDVGVLLHGI 675
BLAST of Lcy01g013290 vs. NCBI nr
Match:
XP_022131620.1 (pentatricopeptide repeat-containing protein At1g19720-like [Momordica charantia])
HSP 1 Score: 1076.2 bits (2782), Expect = 0.0e+00
Identity = 553/679 (81.44%), Postives = 584/679 (86.01%), Query Frame = 0
Query: 1 MATLVDGFLSSNNATP-SDLPSSSKLNFDLHPSFRFSRISMNVACRMHFSAVSARNRHQC 60
MATL D FLS NNA+P PSSSKLNFDLHPS FSR SMN+ CRMHF+AVSA N +
Sbjct: 1 MATLKDAFLSPNNASPVLPYPSSSKLNFDLHPSLGFSRNSMNLNCRMHFTAVSAHNPPRG 60
Query: 61 QFAPIAKSTGRNDVGFNIPIARSLALFNRN---------VQVVKLNAHRVDSLFGNNLAK 120
QF P AKS RNDVG NIPIARSL L N N VVK N HRVDSLFGN L K
Sbjct: 61 QFVPAAKSIDRNDVGSNIPIARSLVLLNSNFLSDSRQTRAHVVKSNVHRVDSLFGNKLPK 120
Query: 121 LY---VKCVDSDCKLFDEIPERTLSAYAALIRAYCRSEKWNELFAAFRSMVDEGILPDKY 180
VKCVDSDCKLFDEIPERTL AYAALIRAYCRS+KWNELFAAFRSMVDEGI PDKY
Sbjct: 121 FNAQDVKCVDSDCKLFDEIPERTLPAYAALIRAYCRSQKWNELFAAFRSMVDEGIQPDKY 180
Query: 181 LVPTILKACSRRQVVTTGKMIHGYVIRKRLVSDIFIGNALMDFYGNCGDLTSSINVFDSM 240
LVPTILKACS RQ+V TGKM+HG+VIRK VSDIF+GNALM+FYGNCGDL SSI VFDSM
Sbjct: 181 LVPTILKACSGRQLVKTGKMVHGFVIRKTFVSDIFVGNALMNFYGNCGDLRSSIVVFDSM 240
Query: 241 SEKDVVSWTALVSAYIEEGLLDEAMESFHSMQASGLKPDLISWNALVSGFARYGEIDTAL 300
SEKDVVSWTALVSAY+EEGLLDEAME FH+MQ+SGLKPDLISWNALVSGFARYGEID AL
Sbjct: 241 SEKDVVSWTALVSAYMEEGLLDEAMEVFHNMQSSGLKPDLISWNALVSGFARYGEIDIAL 300
Query: 301 EYLETMQENGLSPRVNSWNAIISGCVQNGYFKDALDVFINMLLFPENPNSVTVASILPAC 360
+YLE MQE GL+PRVNSWN IISGCVQNGYF+DALDVFINML FPENPNSVTVASILPAC
Sbjct: 301 QYLEEMQEKGLTPRVNSWNGIISGCVQNGYFRDALDVFINMLFFPENPNSVTVASILPAC 360
Query: 361 AGLRDLSLGRAIHAYALKRELCTNIYVEGSLVDMYSKCGQDDYAEEVFAKAEKKNITLWN 420
AGLRD+ LGRAIHAYALK ELC N+YVEGSLVDMYSKCGQD AE+VFA+AEKKNITLWN
Sbjct: 361 AGLRDIGLGRAIHAYALKSELCVNLYVEGSLVDMYSKCGQDYCAEKVFARAEKKNITLWN 420
Query: 421 EIIATYVNQGKIDQALERFRSMQHHGLKPDVVTYNTLLAGHAKNGQKVEAYKLLSEMLQN 480
EIIA YVNQGK+ QALERFRSMQHHGLKPDVVTYNTLLAGHAKNGQKVEAYKLLSEMLQ
Sbjct: 421 EIIAAYVNQGKVSQALERFRSMQHHGLKPDVVTYNTLLAGHAKNGQKVEAYKLLSEMLQK 480
Query: 481 DLAPNVVSLNVLVSGFQQSGLSYEALKLFQTKLCTGCLLNKVITLSIRPNTVTITSALAA 540
DL PNVVSLNVLVSGFQQ GLSYEALKLF+T LCTGCLLNKVITL IRPNTVTIT+ALAA
Sbjct: 481 DLTPNVVSLNVLVSGFQQFGLSYEALKLFRTMLCTGCLLNKVITLPIRPNTVTITAALAA 540
Query: 541 CASLNLLCKGKEIHGYMLRNAFEDNHFVSSALIDMYIKCGNIGSAIQVFRRIKNRNVVCW 600
CA LNL +GKEIHGYMLRN F DNHF+SSALID YIKC +I SAI+VFRRIKNRNVVCW
Sbjct: 541 CADLNLSHQGKEIHGYMLRNGFHDNHFISSALIDTYIKCEDIDSAIRVFRRIKNRNVVCW 600
Query: 601 NALMAGLMKIMQPKVAIDFFCQMLVEGTKPSSVTFSILLPALADRADLEARRQLHSYIIK 660
NAL+AG MK QPKVAI+ FC+MLVEG KPSSVT SIL PAL DL+ RRQLHSYI K
Sbjct: 601 NALIAGHMKERQPKVAIELFCEMLVEGIKPSSVTLSILPPALDLGVDLKVRRQLHSYITK 660
Query: 661 SQLLESCNDLANVLSSDNF 667
SQLLE CNDLANV S F
Sbjct: 661 SQLLEWCNDLANVSSFGKF 679
BLAST of Lcy01g013290 vs. TAIR 10
Match:
AT1G19720.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )
HSP 1 Score: 344.7 bits (883), Expect = 1.6e-94
Identity = 183/531 (34.46%), Postives = 302/531 (56.87%), Query Frame = 0
Query: 101 DSLFGNNLAKLYVK--CVDSDCKLFDEIPERTLSAYAALIRAYCRSEKWNELFAAFRSMV 160
D L +Y K C+ K+FD + ER L ++A+I AY R +W E+ FR M+
Sbjct: 114 DVFVETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMM 173
Query: 161 DEGILPDKYLVPTILKACSRRQVVTTGKMIHGYVIRKRLVSDIFIGNALMDFYGNCGDLT 220
+G+LPD +L P IL+ C+ V GK+IH VI+ + S + + N+++ Y CG+L
Sbjct: 174 KDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELD 233
Query: 221 SSINVFDSMSEKDVVSWTALVSAYIEEGLLDEAMESFHSMQASGLKPDLISWNALVSGFA 280
+ F M E+DV++W +++ AY + G +EA+E M+ G+ P L++WN L+ G+
Sbjct: 234 FATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYN 293
Query: 281 RYGEIDTALEYLETMQENGLSPRVNSWNAIISGCVQNGYFKDALDVFINMLLFPENPNSV 340
+ G+ D A++ ++ M+ G++ V +W A+ISG + NG ALD+F M L PN+V
Sbjct: 294 QLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAV 353
Query: 341 TVASILPACAGLRDLSLGRAIHAYALKRELCTNIYVEGSLVDMYSKCGQDDYAEEVFAKA 400
T+ S + AC+ L+ ++ G +H+ A+K ++ V SLVDMYSKCG+ + A +VF
Sbjct: 354 TIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSV 413
Query: 401 EKKNITLWNEIIATYVNQGKIDQALERFRSMQHHGLKPDVVTYNTLLAGHAKNGQKVEAY 460
+ K++ WN +I Y G +A E F MQ L+P+++T+NT+++G+ KNG + EA
Sbjct: 414 KNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAM 473
Query: 461 KLLSEMLQN-DLAPNVVSLNVLVSGFQQSGLSYEALKLFQTKLCTGCLLNKVITLSIRPN 520
L M ++ + N + N++++G+ Q+G EAL+LF+ K+ PN
Sbjct: 474 DLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFR----------KMQFSRFMPN 533
Query: 521 TVTITSALAACASLNLLCKGKEIHGYMLRNAFEDNHFVSSALIDMYIKCGNIGSAIQVFR 580
+VTI S L ACA+L +EIHG +LR + H V +AL D Y K G+I + +F
Sbjct: 534 SVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFL 593
Query: 581 RIKNRNVVCWNALMAGLMKIMQPKVAIDFFCQMLVEGTKPSSVTFSILLPA 629
++ ++++ WN+L+ G + A+ F QM +G P+ T S ++ A
Sbjct: 594 GMETKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILA 634
BLAST of Lcy01g013290 vs. TAIR 10
Match:
AT4G01030.1 (pentatricopeptide (PPR) repeat-containing protein )
HSP 1 Score: 285.8 bits (730), Expect = 9.0e-77
Identity = 168/517 (32.50%), Postives = 272/517 (52.61%), Query Frame = 0
Query: 112 YVKCVDSDC--KLFDEIPERTLSAYAALIRAYCRSEKWNELFAAFRSMVDEGILPDKYLV 171
Y +CV KLFDE+P+R A+ ++ RS W + FR M G +
Sbjct: 33 YGRCVSLGFANKLFDEMPKRDDLAWNEIVMVNLRSGNWEKAVELFREMQFSGAKAYDSTM 92
Query: 172 PTILKACSRRQVVTTGKMIHGYVIRKRLVSDIFIGNALMDFYGNCGDLTSSINVFDSMSE 231
+L+ CS ++ G+ IHGYV+R L S++ + N+L+ Y G L S VF+SM +
Sbjct: 93 VKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKD 152
Query: 232 KDVVSWTALVSAYIEEGLLDEAMESFHSMQASGLKPDLISWNALVSGFARYGEIDTALEY 291
+++ SW +++S+Y + G +D+A+ M+ GLKPD+++WN+L+SG+A G A+
Sbjct: 153 RNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAV 212
Query: 292 LETMQENGLSPRVNSWNAIISGCVQNGYFKDALDVFINMLLFPENPNSVTVASILPACAG 351
L+ MQ GL P +S ++S+L A A
Sbjct: 213 LKRMQIAGLKPSTSS-----------------------------------ISSLLQAVAE 272
Query: 352 LRDLSLGRAIHAYALKRELCTNIYVEGSLVDMYSKCGQDDYAEEVFAKAEKKNITLWNEI 411
L LG+AIH Y L+ +L ++YVE +L+DMY K G YA VF + KNI WN +
Sbjct: 273 PGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSL 332
Query: 412 IATYVNQGKIDQALERFRSMQHHGLKPDVVTYNTLLAGHAKNGQKVEAYKLLSEMLQNDL 471
++ + A M+ G+KPD +T+N+L +G+A G+ +A ++ +M + +
Sbjct: 333 VSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGV 392
Query: 472 APNVVSLNVLVSGFQQSGLSYEALKLFQTKLCTGCLLNKVITLSIRPNTVTITSALAACA 531
APNVVS + SG ++G ALK+F K+ + PN T+++ L
Sbjct: 393 APNVVSWTAIFSGCSKNGNFRNALKVF----------IKMQEEGVGPNAATMSTLLKILG 452
Query: 532 SLNLLCKGKEIHGYMLRNAFEDNHFVSSALIDMYIKCGNIGSAIQVFRRIKNRNVVCWNA 591
L+LL GKE+HG+ LR + +V++AL+DMY K G++ SAI++F IKN+++ WN
Sbjct: 453 CLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNC 504
Query: 592 LMAGLMKIMQPKVAIDFFCQMLVEGTKPSSVTFSILL 627
++ G + + I F ML G +P ++TF+ +L
Sbjct: 513 MLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVL 504
BLAST of Lcy01g013290 vs. TAIR 10
Match:
AT5G55740.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 285.4 bits (729), Expect = 1.2e-76
Identity = 171/581 (29.43%), Postives = 293/581 (50.43%), Query Frame = 0
Query: 108 LAKLYVKC--VDSDCKLFDEIPERTLSAYAALIRAYCRSEKWNELFAAFRSMVDEGILPD 167
L Y KC ++ LF ++ R + ++AA+I CR F M++ I PD
Sbjct: 113 LVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPD 172
Query: 168 KYLVPTILKACSRRQVVTTGKMIHGYVIRKRLVSDIFIGNALMDFYGNCGDLTSSINVFD 227
++VP + KAC + G+ +HGYV++ L +F+ ++L D YG CG L + VFD
Sbjct: 173 NFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFD 232
Query: 228 SMSEKDVVSWTALVSAYIEEGLLDEAMESFHSMQASGLKPDLISWNALVSGFARYG---- 287
+ +++ V+W AL+ Y++ G +EA+ F M+ G++P ++ + +S A G
Sbjct: 233 EIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEE 292
Query: 288 -------------EIDTAL--------------EYLETMQENGLSPRVNSWNAIISGCVQ 347
E+D L EY E + + V +WN IISG VQ
Sbjct: 293 GKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQ 352
Query: 348 NGYFKDALDVFINMLLFPENPNSVTVASILPACAGLRDLSLGRAIHAYALKRELCTNIYV 407
G +DA+ + M L + VT+A+++ A A +L LG+ + Y ++ ++I +
Sbjct: 353 QGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVL 412
Query: 408 EGSLVDMYSKCGQDDYAEEVFAKAEKKNITLWNEIIATYVNQGKIDQALERFRSMQHHGL 467
+++DMY+KCG A++VF +K++ LWN ++A Y G +AL F MQ G+
Sbjct: 413 ASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGV 472
Query: 468 KPDVVTYNTLLAGHAKNGQKVEAYKLLSEMLQNDLAPNVVSLNVLVSGFQQSGLSYEALK 527
P+V+T+N ++ +NGQ EA + +M + + PN++S +++G Q+G S EA+
Sbjct: 473 PPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAI- 532
Query: 528 LFQTKLCTGCLLNKVITLSIRPNTVTITSALAACASLNLLCKGKEIHGYMLRNAFEDNHF 587
L K+ +RPN +IT AL+ACA L L G+ IHGY++RN +
Sbjct: 533 ---------LFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLV 592
Query: 588 -VSSALIDMYIKCGNIGSAIQVFRRIKNRNVVCWNALMAGLMKIMQPKVAIDFFCQMLVE 647
+ ++L+DMY KCG+I A +VF + NA+++ K AI + +
Sbjct: 593 SIETSLVDMYAKCGDINKAEKVFGSKLYSELPLSNAMISAYALYGNLKEAIALYRSLEGV 652
Query: 648 GTKPSSVTFSILLPALADRADLEARRQLHSYIIKSQLLESC 655
G KP ++T + +L A D+ ++ + I+ + ++ C
Sbjct: 653 GLKPDNITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPC 683
BLAST of Lcy01g013290 vs. TAIR 10
Match:
AT3G09040.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 252.3 bits (643), Expect = 1.1e-66
Identity = 168/567 (29.63%), Postives = 279/567 (49.21%), Query Frame = 0
Query: 105 GNNLAKLYVKC--VDSDCKLFDEIPERTLSAYAALIRAYCRSEKWNELFAAFRSMVDEGI 164
GN + LY KC V K FD + E+ ++A+ +++ Y K ++ +F S+ + I
Sbjct: 98 GNAIVDLYAKCAQVSYAEKQFDFL-EKDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQI 157
Query: 165 LPDKYLVPTILKACSRRQVVTTGKMIHGYVIRKRLVSDIFIGNALMDFYGNCGDLTSSIN 224
P+K+ +L C+R V G+ IH +I+ L + + G AL+D Y C ++ +
Sbjct: 158 FPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARR 217
Query: 225 VFDSMSEKDVVSWTALVSAYIEEGLLDEAMESFHSMQASGLKPDLISWNALVSGFARYGE 284
VF+ + + + V WT L S Y++ GL +EA+ F M+ G +PD +++ +++ + R G+
Sbjct: 218 VFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGK 277
Query: 285 IDTALEYLETMQENGLSPRVNSWNAIISGCVQNGYFKDALDVFINMLLFPENPNSVTVAS 344
+ A M SP V +WN +ISG + G A++ F NM T+ S
Sbjct: 278 LKDARLLFGEMS----SPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGS 337
Query: 345 ILPACAGLRDLSLGRAIHAYALKRELCTNIYVEGSLVDMYSKCGQDDYAEEVFAKAEKKN 404
+L A + +L LG +HA A+K L +NIYV SLV MYSKC + + A +VF E+KN
Sbjct: 338 VLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKN 397
Query: 405 ITLWNEIIATYVNQGKIDQALERFRSMQHHGLKPDVVTYNTLLAGHAKNGQKVEAYKLLS 464
WN +I Y + G+ + +E F M+ G D T+ +LL+ A + + S
Sbjct: 398 DVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHS 457
Query: 465 EMLQNDLAPNVVSLNVLVSGFQQSGLSYEALKLFQTKLC--------------------- 524
+++ LA N+ N LV + + G +A ++F+ ++C
Sbjct: 458 IIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFE-RMCDRDNVTWNTIIGSYVQDENES 517
Query: 525 -TGCLLNKVITLSIRPNTVTITSALAACASLNLLCKGKEIHGYMLRNAFEDNHFVSSALI 584
L ++ I + + S L AC ++ L +GK++H ++ + + S+LI
Sbjct: 518 EAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLI 577
Query: 585 DMYIKCGNIGSAIQVFRRIKNRNVVCWNALMAGLMKIMQPKVAIDFFCQMLVEGTKPSSV 644
DMY KCG I A +VF + +VV NAL+AG + + A+ F +ML G PS +
Sbjct: 578 DMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQ-NNLEEAVVLFQEMLTRGVNPSEI 637
Query: 645 TFSILLPALADRADLEARRQLHSYIIK 648
TF+ ++ A L Q H I K
Sbjct: 638 TFATIVEACHKPESLTLGTQFHGQITK 657
BLAST of Lcy01g013290 vs. TAIR 10
Match:
AT1G20230.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 239.2 bits (609), Expect = 9.7e-63
Identity = 147/514 (28.60%), Postives = 243/514 (47.28%), Query Frame = 0
Query: 115 CVDSDCKLFDEIPERTLSAYAALIRAYCRSEKWNELFAAFRSMVDEGILPDKYLVPTILK 174
C + + IP+ T+ ++++LI A +++ + + F M G++PD +++P + K
Sbjct: 65 CFNDADLVLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFK 124
Query: 175 ACSRRQVVTTGKMIHGYVIRKRLVSDIFIGNALMDFYGNCGDLTSSINVFDSMSEKDVVS 234
C+ GK IH L D F+ ++ Y CG + + VFD MS+KDVV+
Sbjct: 125 VCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVT 184
Query: 235 WTALVSAYIEEGLLDEAMESFHSMQASGLKPDLISWNALVSGFARYGEIDTALEYLETMQ 294
+AL+ AY +G L+E + M++SG++ +++SWN ++SGF R
Sbjct: 185 CSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNR--------------- 244
Query: 295 ENGLSPRVNSWNAIISGCVQNGYFKDALDVFINMLLFPENPNSVTVASILPACAGLRDLS 354
+GY K+A+ +F + P+ VTV+S+LP+ L+
Sbjct: 245 --------------------SGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLN 304
Query: 355 LGRAIHAYALKRELCTNIYVEGSLVDMYSKCGQDDYAEEVFAKAEKKNITLWNEIIATYV 414
+GR IH Y +K+ L + V +++DMY K G +F + E + N I
Sbjct: 305 MGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLS 364
Query: 415 NQGKIDQALERFRSMQHHGLKPDVVTYNTLLAGHAKNGQKVEAYKLLSEMLQNDLAPNVV 474
G +D+ALE F + ++ +VV++ +++AG A+NG+ +EA +L EM
Sbjct: 365 RNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREM---------- 424
Query: 475 SLNVLVSGFQQSGLSYEALKLFQTKLCTGCLLNKVITLSIRPNTVTITSALAACASLNLL 534
Q +G ++PN VTI S L AC ++ L
Sbjct: 425 ---------QVAG--------------------------VKPNHVTIPSMLPACGNIAAL 484
Query: 535 CKGKEIHGYMLRNAFEDNHFVSSALIDMYIKCGNIGSAIQVFRRIKNRNVVCWNALMAGL 594
G+ HG+ +R DN V SALIDMY KCG I + VF + +N+VCWN+LM G
Sbjct: 485 GHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGF 498
Query: 595 MKIMQPKVAIDFFCQMLVEGTKPSSVTFSILLPA 629
+ K + F ++ KP ++F+ LL A
Sbjct: 545 SMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSA 498
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Q9FXH1 | 2.3e-93 | 34.46 | Pentatricopeptide repeat-containing protein At1g19720 OS=Arabidopsis thaliana OX... | [more] |
| Q9SV26 | 1.3e-75 | 32.50 | Pentatricopeptide repeat-containing protein At4g01030, mitochondrial OS=Arabidop... | [more] |
| Q9FM64 | 1.7e-75 | 29.43 | Pentatricopeptide repeat-containing protein At5g55740, chloroplastic OS=Arabidop... | [more] |
| Q9SS83 | 1.6e-65 | 29.63 | Pentatricopeptide repeat-containing protein At3g09040, mitochondrial OS=Arabidop... | [more] |
| Q9LNU6 | 1.4e-61 | 28.60 | Pentatricopeptide repeat-containing protein At1g20230 OS=Arabidopsis thaliana OX... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A5A7VGH4 | 0.0e+00 | 80.83 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
| A0A6J1BQ73 | 0.0e+00 | 81.44 | pentatricopeptide repeat-containing protein At1g19720-like OS=Momordica charanti... | [more] |
| A0A1S3BDB0 | 0.0e+00 | 80.68 | pentatricopeptide repeat-containing protein At1g19720-like OS=Cucumis melo OX=36... | [more] |
| A0A0A0KFW8 | 2.5e-310 | 80.83 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G399730 PE=4 SV=1 | [more] |
| A0A6J1K3Z4 | 7.5e-297 | 81.53 | pentatricopeptide repeat-containing protein At1g19720-like OS=Cucurbita maxima O... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| XP_038884429.1 | 0.0e+00 | 84.32 | pentatricopeptide repeat-containing protein At1g19720-like [Benincasa hispida] | [more] |
| KAG6598662.1 | 0.0e+00 | 81.83 | Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... | [more] |
| KAG7029606.1 | 0.0e+00 | 81.54 | Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... | [more] |
| KAA0064811.1 | 0.0e+00 | 80.83 | pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] | [more] |
| XP_022131620.1 | 0.0e+00 | 81.44 | pentatricopeptide repeat-containing protein At1g19720-like [Momordica charantia] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT1G19720.1 | 1.6e-94 | 34.46 | Pentatricopeptide repeat (PPR-like) superfamily protein | [more] |
| AT4G01030.1 | 9.0e-77 | 32.50 | pentatricopeptide (PPR) repeat-containing protein | [more] |
| AT5G55740.1 | 1.2e-76 | 29.43 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
| AT3G09040.1 | 1.1e-66 | 29.63 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
| AT1G20230.1 | 9.7e-63 | 28.60 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
