Lcy01g012910 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy01g012910
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	methyl-CpG-binding domain-containing protein 8-like
Location	Chr01: 34167538 .. 34169108 (+)
RNA-Seq Expression	Lcy01g012910
Synteny	Lcy01g012910

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAAAGGAAAATAGAGTTGAGAAGAGAAGAGAAGAAAGAAATGACAACCGCCGGAGAAAGTTTGAAGAAGAAAGAGTTGGGTGGGAGAAAGAAGAAGAAGAGGTTGGATGGAAGGAAGAAGTAGGAGAGAGGGAGGAAATAAATAAAAAATATATAAAATAATAATTATATAATAATATAATTATTATTTTATTATATTTATATTTTAAAAACTTAAAAAATAATTTTTTTAATAAAAAATTTTTGCCACGTCAGCAACCGGTTAACTATTAACGGAAAATTGAATGGAGGGACCAAATTGAAACTAAAACCAAATCTCAGGACTAAATTATTGAGTTTGAAAACTCAGAAAACAAAATAAAACATAACCCAAACCGAGACTAAAAGTGTAATTTTTCTAAATTTTAAATTGTCATCGGTTGAGGTAACTCTAATGGCAATCAATGTCAATGGATAAAGGGCGTGGGCCGACCCACTGGCTATAAGTCGGGCCAAGGCCCAGTTTCAAACCGGTTTTCCCCTTTAACAGTTGCGCTGCTCCCTTTCGCTCTTCGATCTCCCTCTCCCTCTCTTTTTTCGCAATTTACAGGACCTCATGCCATATCCATGGCTTCCACAACTATGGTTGCTTCCCCCTCCAACGACAACTTCCGCATGAATACTCTCCCCATCATAGATCTCCGCCTCCTCTCCCAATCCGAGCTCTATTGTCTCTCTCGTTTCTCCTCCTCGTCTTCTTCTTCCTCAACCTCCCAATCCAACAACGACGACGACGTTCTCATCCCCAAAATTGATCGATCTGTCTTCAACGAGTCCGCCGGTAGCCGGAAACAAACCTATTCCCGCCTCCGTCTCGCCCCTCGCAAACCCCAATTTCCCTCCTCCTCCTCCTCCTCCACAATTCGCCCCCAATCCCCTGACCGCCTCGATGTAGAGAGCGCCCAGATTATTACTCTCTTCAAGCAGCTCTTCGTTGGGGAATCTCATTGTGCCGTCAACGACACCTACGACGATGGAGATGAGGACCTGGTCCTTATCAACCACATTTACGATGAATCGGTACCTGATTCTTCCTACGCGATTTTCCAGAGCATTCCTGTTGATATCATCGACAGCAGTTACGCTCCGATTAAGCGGCGGAGAGGGCGGCCGCGGAAGGATGGCAATCGGTTTGCTCAGAGTAATGGAAATGCGGCTCCGAACTCCAAAAGCGGATGCGAAAAACGGGCGGAGGAGGAGGAGATCGTAATGGTAATGCTGTGAACCTGGTCGCTTCGACCTACCTGTAGATGTAAGATGACTGTTATCGTTCATTCTTTAAATTTGATTGATCGTTCTTTACTTTATTATTTATATGTTTTTTCCCTTTTCTTTTCCAAGTTTACTGAAATAATTTTTTGAAATTTTCTTGAAAAAGAGAAGGAAAGAAAGAAAATGCTTTGAAATCAGTATTTTGATTTTCGATCATTTTTTTTTTTTTTTATAAAAATGAAAATGTTCAGTATTTATTTATGCTTTCCAACTTTTCTTTTTCAAGTTTTTTAAAAAATAAGTACACTACAGTCTAAT

mRNA sequence

AAAAAAAGGAAAATAGAGTTGAGAAGAGAAGAGAAGAAAGAAATGACAACCGCCGGAGAAAGTTTGAAGAAGAAAGAGTTGGGTGGGAGAAAGAAGAAGAAGAGGTTGGATGGAAGGAAGAAGTAGGAGAGAGGGAGGAAATAAATAAAAAATATATAAAATAATAATTATATAATAATATAATTATTATTTTATTATATTTATATTTTAAAAACTTAAAAAATAATTTTTTTAATAAAAAATTTTTGCCACGTCAGCAACCGGTTAACTATTAACGGAAAATTGAATGGAGGGACCAAATTGAAACTAAAACCAAATCTCAGGACTAAATTATTGAGTTTGAAAACTCAGAAAACAAAATAAAACATAACCCAAACCGAGACTAAAAGTGTAATTTTTCTAAATTTTAAATTGTCATCGGTTGAGGTAACTCTAATGGCAATCAATGTCAATGGATAAAGGGCGTGGGCCGACCCACTGGCTATAAGTCGGGCCAAGGCCCAGTTTCAAACCGGTTTTCCCCTTTAACAGTTGCGCTGCTCCCTTTCGCTCTTCGATCTCCCTCTCCCTCTCTTTTTTCGCAATTTACAGGACCTCATGCCATATCCATGGCTTCCACAACTATGGTTGCTTCCCCCTCCAACGACAACTTCCGCATGAATACTCTCCCCATCATAGATCTCCGCCTCCTCTCCCAATCCGAGCTCTATTGTCTCTCTCGTTTCTCCTCCTCGTCTTCTTCTTCCTCAACCTCCCAATCCAACAACGACGACGACGTTCTCATCCCCAAAATTGATCGATCTGTCTTCAACGAGTCCGCCGGTAGCCGGAAACAAACCTATTCCCGCCTCCGTCTCGCCCCTCGCAAACCCCAATTTCCCTCCTCCTCCTCCTCCTCCACAATTCGCCCCCAATCCCCTGACCGCCTCGATGTAGAGAGCGCCCAGATTATTACTCTCTTCAAGCAGCTCTTCGTTGGGGAATCTCATTGTGCCGTCAACGACACCTACGACGATGGAGATGAGGACCTGGTCCTTATCAACCACATTTACGATGAATCGGTACCTGATTCTTCCTACGCGATTTTCCAGAGCATTCCTGTTGATATCATCGACAGCAGTTACGCTCCGATTAAGCGGCGGAGAGGGCGGCCGCGGAAGGATGGCAATCGGTTTGCTCAGAGTAATGGAAATGCGGCTCCGAACTCCAAAAGCGGATGCGAAAAACGGGCGGAGGAGGAGGAGATCGTAATGGTAATGCTGTGAACCTGGTCGCTTCGACCTACCTGTAGATGTAAGATGACTGTTATCGTTCATTCTTTAAATTTGATTGATCGTTCTTTACTTTATTATTTATATGTTTTTTCCCTTTTCTTTTCCAAGTTTACTGAAATAATTTTTTGAAATTTTCTTGAAAAAGAGAAGGAAAGAAAGAAAATGCTTTGAAATCAGTATTTTGATTTTCGATCATTTTTTTTTTTTTTTATAAAAATGAAAATGTTCAGTATTTATTTATGCTTTCCAACTTTTCTTTTTCAAGTTTTTTAAAAAATAAGTACACTACAGTCTAAT

Coding sequence (CDS)

ATGGCTTCCACAACTATGGTTGCTTCCCCCTCCAACGACAACTTCCGCATGAATACTCTCCCCATCATAGATCTCCGCCTCCTCTCCCAATCCGAGCTCTATTGTCTCTCTCGTTTCTCCTCCTCGTCTTCTTCTTCCTCAACCTCCCAATCCAACAACGACGACGACGTTCTCATCCCCAAAATTGATCGATCTGTCTTCAACGAGTCCGCCGGTAGCCGGAAACAAACCTATTCCCGCCTCCGTCTCGCCCCTCGCAAACCCCAATTTCCCTCCTCCTCCTCCTCCTCCACAATTCGCCCCCAATCCCCTGACCGCCTCGATGTAGAGAGCGCCCAGATTATTACTCTCTTCAAGCAGCTCTTCGTTGGGGAATCTCATTGTGCCGTCAACGACACCTACGACGATGGAGATGAGGACCTGGTCCTTATCAACCACATTTACGATGAATCGGTACCTGATTCTTCCTACGCGATTTTCCAGAGCATTCCTGTTGATATCATCGACAGCAGTTACGCTCCGATTAAGCGGCGGAGAGGGCGGCCGCGGAAGGATGGCAATCGGTTTGCTCAGAGTAATGGAAATGCGGCTCCGAACTCCAAAAGCGGATGCGAAAAACGGGCGGAGGAGGAGGAGATCGTAATGGTAATGCTGTGA

Protein sequence

MASTTMVASPSNDNFRMNTLPIIDLRLLSQSELYCLSRFSSSSSSSSTSQSNNDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQFPSSSSSSTIRPQSPDRLDVESAQIITLFKQLFVGESHCAVNDTYDDGDEDLVLINHIYDESVPDSSYAIFQSIPVDIIDSSYAPIKRRRGRPRKDGNRFAQSNGNAAPNSKSGCEKRAEEEEIVMVML

Homology

[Close]

BLAST of Lcy01g012910 vs. ExPASy Swiss-Prot
Match: Q9LME6 (Methyl-CpG-binding domain-containing protein 8 OS=Arabidopsis thaliana OX=3702 GN=MBD8 PE=2 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 1.7e-18
Identity = 81/177 (45.76%), Postives = 104/177 (58.76%), Query Frame = 0


Query: 19  TLPIIDLRLLSQSELYCLSRFSSSSSSSSTS--QSNNDDDVLIPKIDRSVFNESAGSRKQ 78
           +LP+ID RLLSQSEL  LS+ SS S SSS S   S   DD L PKIDRSVFNESAGSRKQ
Sbjct: 25  SLPLIDTRLLSQSELRALSQCSSLSPSSSASLAASAGGDDDLTPKIDRSVFNESAGSRKQ 84

Query: 79  TYSRLRLAPRKPQFPSSSSSSTIRPQSPDRLDVESAQIITLFKQLFVGESHCAVNDTYDD 138
           T+ RLRLA R PQ P    S   + Q  D    E  Q+ +L + LF  +S+ +  +  D+
Sbjct: 85  TFLRLRLA-RHPQPPEEPPSP--QRQRDDSSREEQTQVASLLRSLFNVDSNQS-KEEEDE 144

Query: 139 GDEDLVLINHIYDESVPDSSYAIFQSIPVDIID------SSYAPIKRRRGRPRKDGN 188
           G+E+L       +  +  +SY ++Q   +D I       +S   IKR+RGRPRK  N
Sbjct: 145 GEEEL----EDNEGQIHYNSY-VYQRPNLDSIQNVLIQGTSGNKIKRKRGRPRKIRN 192

[Close]

BLAST of Lcy01g012910 vs. ExPASy TrEMBL
Match: A0A6J1KK67 (methyl-CpG-binding domain-containing protein 8-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111496461 PE=4 SV=1)

HSP 1 Score: 375.9 bits (964), Expect = 1.1e-100
Identity = 199/218 (91.28%), Postives = 207/218 (94.95%), Query Frame = 0


Query: 1   MASTTMVASPSNDNFRMNTLPIIDLRLLSQSELYCLSRFSSSSSSSSTSQSNNDDDVLIP 60
           MASTTMVASPS+D FRMNTLPIIDLRLLSQSELYCLSRF SSSSSSS SQSNNDDDVLIP
Sbjct: 1   MASTTMVASPSDDRFRMNTLPIIDLRLLSQSELYCLSRF-SSSSSSSMSQSNNDDDVLIP 60

Query: 61  KIDRSVFNESAGSRKQTYSRLRLAPRKPQFPSSSSSSTIRPQSPDRLDVESAQIITLFKQ 120
           KIDRSVFNESAGSRKQTYSRLRLAPRK QFPSSSSSSTIRPQSPDR D ESA+I+TLFKQ
Sbjct: 61  KIDRSVFNESAGSRKQTYSRLRLAPRKSQFPSSSSSSTIRPQSPDRFDEESAEIVTLFKQ 120

Query: 121 LFVGESHCAVNDTYDDGDEDLVLINHIYDESVPDSSYAIFQSIPVDIIDSSYAPIKRRRG 180
           LFVGESHC VND+YDDGDEDLVL+NHIYDESVP+SSYAIF SIPVDIIDSSYAPIKRRRG
Sbjct: 121 LFVGESHCGVNDSYDDGDEDLVLVNHIYDESVPESSYAIFHSIPVDIIDSSYAPIKRRRG 180

Query: 181 RPRKDGNRFAQSNGNAAPNSKSGCEKRAEEEEIVMVML 219
           RPRKD NRFAQSNGNAA NS SGC+KRAEE+EIVMVML
Sbjct: 181 RPRKDSNRFAQSNGNAAANSISGCDKRAEEDEIVMVML 217

[Close]

BLAST of Lcy01g012910 vs. ExPASy TrEMBL
Match: A0A6J1GJB3 (methyl-CpG-binding domain-containing protein 8-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111454729 PE=4 SV=1)

HSP 1 Score: 375.9 bits (964), Expect = 1.1e-100
Identity = 199/218 (91.28%), Postives = 207/218 (94.95%), Query Frame = 0


Query: 1   MASTTMVASPSNDNFRMNTLPIIDLRLLSQSELYCLSRFSSSSSSSSTSQSNNDDDVLIP 60
           MASTTMVASPS+D FRMNTLPIIDLRLLSQSELYCLSRF SSSSSSS SQSNNDDDVLIP
Sbjct: 1   MASTTMVASPSDDRFRMNTLPIIDLRLLSQSELYCLSRF-SSSSSSSISQSNNDDDVLIP 60

Query: 61  KIDRSVFNESAGSRKQTYSRLRLAPRKPQFPSSSSSSTIRPQSPDRLDVESAQIITLFKQ 120
           KIDRSVFNESAGSRKQTYSRLRLAPRK QFPSSSSSSTIRPQSPDR D ESA+I+TLFKQ
Sbjct: 61  KIDRSVFNESAGSRKQTYSRLRLAPRKSQFPSSSSSSTIRPQSPDRFDEESAEIVTLFKQ 120

Query: 121 LFVGESHCAVNDTYDDGDEDLVLINHIYDESVPDSSYAIFQSIPVDIIDSSYAPIKRRRG 180
           LFVGESHC VND+YDDGDEDLVL+NHIYDESVP+SSYAIF SIPVDIIDSSYAPIKRRRG
Sbjct: 121 LFVGESHCGVNDSYDDGDEDLVLVNHIYDESVPESSYAIFHSIPVDIIDSSYAPIKRRRG 180

Query: 181 RPRKDGNRFAQSNGNAAPNSKSGCEKRAEEEEIVMVML 219
           RPRKD NRFAQSNGNAA NS SGC+KRAEE+EIVMVML
Sbjct: 181 RPRKDSNRFAQSNGNAAANSISGCDKRAEEDEIVMVML 217

[Close]

BLAST of Lcy01g012910 vs. ExPASy TrEMBL
Match: A0A6J1BS27 (methyl-CpG-binding domain-containing protein 8 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111005043 PE=4 SV=1)

HSP 1 Score: 375.6 bits (963), Expect = 1.5e-100
Identity = 199/218 (91.28%), Postives = 208/218 (95.41%), Query Frame = 0


Query: 1   MASTTMVASPSNDNFRMNTLPIIDLRLLSQSELYCLSRFSSSSSSSSTSQSNNDDDVLIP 60
           MASTTMVASPSN++FRMNTLPIIDLRLLSQSELYCLSRF  SSSSSSTSQSN+DDDVLIP
Sbjct: 1   MASTTMVASPSNESFRMNTLPIIDLRLLSQSELYCLSRF--SSSSSSTSQSNDDDDVLIP 60

Query: 61  KIDRSVFNESAGSRKQTYSRLRLAPRKPQFPSSSSSSTIRPQSPDRLDVESAQIITLFKQ 120
           KIDRSVFNESAGSRKQTYSRLRLAPRKPQFPSSSSSS IRPQSP+RLD ESA+IITLFKQ
Sbjct: 61  KIDRSVFNESAGSRKQTYSRLRLAPRKPQFPSSSSSSVIRPQSPERLDAESAKIITLFKQ 120

Query: 121 LFVGESHCAVNDTYDDGDEDLVLINHIYDESVPDSSYAIFQSIPVDIIDSSYAPIKRRRG 180
           LFVG+SHC V+++Y D DEDLVLINHIYDESVPDSSYAIFQSIPVDIIDSSYAPIKRRRG
Sbjct: 121 LFVGDSHCTVDNSYGDEDEDLVLINHIYDESVPDSSYAIFQSIPVDIIDSSYAPIKRRRG 180

Query: 181 RPRKDGNRFAQSNGNAAPNSKSGCEKRAEEEEIVMVML 219
           RPRKD NRF QSNGNA PNSKSGCEKRAEEEEIVMVML
Sbjct: 181 RPRKDSNRFPQSNGNAVPNSKSGCEKRAEEEEIVMVML 216

[Close]

BLAST of Lcy01g012910 vs. ExPASy TrEMBL
Match: A0A6J1KLZ0 (methyl-CpG-binding domain-containing protein 8-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111496461 PE=4 SV=1)

HSP 1 Score: 370.5 bits (950), Expect = 4.7e-99
Identity = 196/215 (91.16%), Postives = 204/215 (94.88%), Query Frame = 0


Query: 1   MASTTMVASPSNDNFRMNTLPIIDLRLLSQSELYCLSRFSSSSSSSSTSQSNNDDDVLIP 60
           MASTTMVASPS+D FRMNTLPIIDLRLLSQSELYCLSRF SSSSSSS SQSNNDDDVLIP
Sbjct: 1   MASTTMVASPSDDRFRMNTLPIIDLRLLSQSELYCLSRF-SSSSSSSMSQSNNDDDVLIP 60

Query: 61  KIDRSVFNESAGSRKQTYSRLRLAPRKPQFPSSSSSSTIRPQSPDRLDVESAQIITLFKQ 120
           KIDRSVFNESAGSRKQTYSRLRLAPRK QFPSSSSSSTIRPQSPDR D ESA+I+TLFKQ
Sbjct: 61  KIDRSVFNESAGSRKQTYSRLRLAPRKSQFPSSSSSSTIRPQSPDRFDEESAEIVTLFKQ 120

Query: 121 LFVGESHCAVNDTYDDGDEDLVLINHIYDESVPDSSYAIFQSIPVDIIDSSYAPIKRRRG 180
           LFVGESHC VND+YDDGDEDLVL+NHIYDESVP+SSYAIF SIPVDIIDSSYAPIKRRRG
Sbjct: 121 LFVGESHCGVNDSYDDGDEDLVLVNHIYDESVPESSYAIFHSIPVDIIDSSYAPIKRRRG 180

Query: 181 RPRKDGNRFAQSNGNAAPNSKSGCEKRAEEEEIVM 216
           RPRKD NRFAQSNGNAA NS SGC+KRAEE+EIVM
Sbjct: 181 RPRKDSNRFAQSNGNAAANSISGCDKRAEEDEIVM 214

[Close]

BLAST of Lcy01g012910 vs. ExPASy TrEMBL
Match: A0A6J1GJ84 (methyl-CpG-binding domain-containing protein 8-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111454729 PE=4 SV=1)

HSP 1 Score: 370.5 bits (950), Expect = 4.7e-99
Identity = 196/215 (91.16%), Postives = 204/215 (94.88%), Query Frame = 0


Query: 1   MASTTMVASPSNDNFRMNTLPIIDLRLLSQSELYCLSRFSSSSSSSSTSQSNNDDDVLIP 60
           MASTTMVASPS+D FRMNTLPIIDLRLLSQSELYCLSRF SSSSSSS SQSNNDDDVLIP
Sbjct: 1   MASTTMVASPSDDRFRMNTLPIIDLRLLSQSELYCLSRF-SSSSSSSISQSNNDDDVLIP 60

Query: 61  KIDRSVFNESAGSRKQTYSRLRLAPRKPQFPSSSSSSTIRPQSPDRLDVESAQIITLFKQ 120
           KIDRSVFNESAGSRKQTYSRLRLAPRK QFPSSSSSSTIRPQSPDR D ESA+I+TLFKQ
Sbjct: 61  KIDRSVFNESAGSRKQTYSRLRLAPRKSQFPSSSSSSTIRPQSPDRFDEESAEIVTLFKQ 120

Query: 121 LFVGESHCAVNDTYDDGDEDLVLINHIYDESVPDSSYAIFQSIPVDIIDSSYAPIKRRRG 180
           LFVGESHC VND+YDDGDEDLVL+NHIYDESVP+SSYAIF SIPVDIIDSSYAPIKRRRG
Sbjct: 121 LFVGESHCGVNDSYDDGDEDLVLVNHIYDESVPESSYAIFHSIPVDIIDSSYAPIKRRRG 180

Query: 181 RPRKDGNRFAQSNGNAAPNSKSGCEKRAEEEEIVM 216
           RPRKD NRFAQSNGNAA NS SGC+KRAEE+EIVM
Sbjct: 181 RPRKDSNRFAQSNGNAAANSISGCDKRAEEDEIVM 214

[Close]

BLAST of Lcy01g012910 vs. NCBI nr
Match: XP_023002677.1 (methyl-CpG-binding domain-containing protein 8-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 375.9 bits (964), Expect = 2.3e-100
Identity = 199/218 (91.28%), Postives = 207/218 (94.95%), Query Frame = 0


Query: 1   MASTTMVASPSNDNFRMNTLPIIDLRLLSQSELYCLSRFSSSSSSSSTSQSNNDDDVLIP 60
           MASTTMVASPS+D FRMNTLPIIDLRLLSQSELYCLSRF SSSSSSS SQSNNDDDVLIP
Sbjct: 1   MASTTMVASPSDDRFRMNTLPIIDLRLLSQSELYCLSRF-SSSSSSSMSQSNNDDDVLIP 60

Query: 61  KIDRSVFNESAGSRKQTYSRLRLAPRKPQFPSSSSSSTIRPQSPDRLDVESAQIITLFKQ 120
           KIDRSVFNESAGSRKQTYSRLRLAPRK QFPSSSSSSTIRPQSPDR D ESA+I+TLFKQ
Sbjct: 61  KIDRSVFNESAGSRKQTYSRLRLAPRKSQFPSSSSSSTIRPQSPDRFDEESAEIVTLFKQ 120

Query: 121 LFVGESHCAVNDTYDDGDEDLVLINHIYDESVPDSSYAIFQSIPVDIIDSSYAPIKRRRG 180
           LFVGESHC VND+YDDGDEDLVL+NHIYDESVP+SSYAIF SIPVDIIDSSYAPIKRRRG
Sbjct: 121 LFVGESHCGVNDSYDDGDEDLVLVNHIYDESVPESSYAIFHSIPVDIIDSSYAPIKRRRG 180

Query: 181 RPRKDGNRFAQSNGNAAPNSKSGCEKRAEEEEIVMVML 219
           RPRKD NRFAQSNGNAA NS SGC+KRAEE+EIVMVML
Sbjct: 181 RPRKDSNRFAQSNGNAAANSISGCDKRAEEDEIVMVML 217

[Close]

BLAST of Lcy01g012910 vs. NCBI nr
Match: XP_022952018.1 (methyl-CpG-binding domain-containing protein 8-like isoform X2 [Cucurbita moschata] >XP_023538587.1 methyl-CpG-binding domain-containing protein 8-like isoform X2 [Cucurbita pepo subsp. pepo] >KAG7020217.1 Methyl-CpG-binding domain-containing protein 8, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 375.9 bits (964), Expect = 2.3e-100
Identity = 199/218 (91.28%), Postives = 207/218 (94.95%), Query Frame = 0


Query: 1   MASTTMVASPSNDNFRMNTLPIIDLRLLSQSELYCLSRFSSSSSSSSTSQSNNDDDVLIP 60
           MASTTMVASPS+D FRMNTLPIIDLRLLSQSELYCLSRF SSSSSSS SQSNNDDDVLIP
Sbjct: 1   MASTTMVASPSDDRFRMNTLPIIDLRLLSQSELYCLSRF-SSSSSSSISQSNNDDDVLIP 60

Query: 61  KIDRSVFNESAGSRKQTYSRLRLAPRKPQFPSSSSSSTIRPQSPDRLDVESAQIITLFKQ 120
           KIDRSVFNESAGSRKQTYSRLRLAPRK QFPSSSSSSTIRPQSPDR D ESA+I+TLFKQ
Sbjct: 61  KIDRSVFNESAGSRKQTYSRLRLAPRKSQFPSSSSSSTIRPQSPDRFDEESAEIVTLFKQ 120

Query: 121 LFVGESHCAVNDTYDDGDEDLVLINHIYDESVPDSSYAIFQSIPVDIIDSSYAPIKRRRG 180
           LFVGESHC VND+YDDGDEDLVL+NHIYDESVP+SSYAIF SIPVDIIDSSYAPIKRRRG
Sbjct: 121 LFVGESHCGVNDSYDDGDEDLVLVNHIYDESVPESSYAIFHSIPVDIIDSSYAPIKRRRG 180

Query: 181 RPRKDGNRFAQSNGNAAPNSKSGCEKRAEEEEIVMVML 219
           RPRKD NRFAQSNGNAA NS SGC+KRAEE+EIVMVML
Sbjct: 181 RPRKDSNRFAQSNGNAAANSISGCDKRAEEDEIVMVML 217

[Close]

BLAST of Lcy01g012910 vs. NCBI nr
Match: XP_022132084.1 (methyl-CpG-binding domain-containing protein 8 isoform X2 [Momordica charantia])

HSP 1 Score: 375.6 bits (963), Expect = 3.0e-100
Identity = 199/218 (91.28%), Postives = 208/218 (95.41%), Query Frame = 0


Query: 1   MASTTMVASPSNDNFRMNTLPIIDLRLLSQSELYCLSRFSSSSSSSSTSQSNNDDDVLIP 60
           MASTTMVASPSN++FRMNTLPIIDLRLLSQSELYCLSRF  SSSSSSTSQSN+DDDVLIP
Sbjct: 1   MASTTMVASPSNESFRMNTLPIIDLRLLSQSELYCLSRF--SSSSSSTSQSNDDDDVLIP 60

Query: 61  KIDRSVFNESAGSRKQTYSRLRLAPRKPQFPSSSSSSTIRPQSPDRLDVESAQIITLFKQ 120
           KIDRSVFNESAGSRKQTYSRLRLAPRKPQFPSSSSSS IRPQSP+RLD ESA+IITLFKQ
Sbjct: 61  KIDRSVFNESAGSRKQTYSRLRLAPRKPQFPSSSSSSVIRPQSPERLDAESAKIITLFKQ 120

Query: 121 LFVGESHCAVNDTYDDGDEDLVLINHIYDESVPDSSYAIFQSIPVDIIDSSYAPIKRRRG 180
           LFVG+SHC V+++Y D DEDLVLINHIYDESVPDSSYAIFQSIPVDIIDSSYAPIKRRRG
Sbjct: 121 LFVGDSHCTVDNSYGDEDEDLVLINHIYDESVPDSSYAIFQSIPVDIIDSSYAPIKRRRG 180

Query: 181 RPRKDGNRFAQSNGNAAPNSKSGCEKRAEEEEIVMVML 219
           RPRKD NRF QSNGNA PNSKSGCEKRAEEEEIVMVML
Sbjct: 181 RPRKDSNRFPQSNGNAVPNSKSGCEKRAEEEEIVMVML 216

[Close]

BLAST of Lcy01g012910 vs. NCBI nr
Match: XP_038885026.1 (methyl-CpG-binding domain-containing protein 8 isoform X2 [Benincasa hispida])

HSP 1 Score: 374.0 bits (959), Expect = 8.7e-100
Identity = 202/225 (89.78%), Postives = 209/225 (92.89%), Query Frame = 0


Query: 1   MASTTMVASPSNDNFRMNTLPIIDLRLLSQSELYCLSRF-SSSSSSSSTSQSNNDDDVLI 60
           MASTTMVASPSND+FRMN LPIIDLRLLSQSELYCLSRF SSSSSSSSTSQSNN+DDVLI
Sbjct: 1   MASTTMVASPSNDSFRMNPLPIIDLRLLSQSELYCLSRFSSSSSSSSSTSQSNNEDDVLI 60

Query: 61  PKIDRSVFNESAGSRKQTYSRLRLAPRKPQFPSSSSSSTIRPQSPDRLDVESAQIITLFK 120
           PKIDRSVFNESAGSRKQTYSRLRLAPRKPQF SSSSSSTIRPQSPDRLD ESAQI+TLFK
Sbjct: 61  PKIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQSPDRLDTESAQIVTLFK 120

Query: 121 QLFVGESHCAVNDTYDDGDEDLVLINHIYDESVPDSSYAIFQSIPVDIIDSSYAPIKRRR 180
           QLFVG+ HCAVND+Y DGDEDLVL+NHIYDESVPDSSYAIFQSIPVDIIDSSYAPIKRRR
Sbjct: 121 QLFVGDPHCAVNDSYGDGDEDLVLVNHIYDESVPDSSYAIFQSIPVDIIDSSYAPIKRRR 180

Query: 181 GRPRKDGNRFAQSNGNAAPNSKSGCEKRA------EEEEIVMVML 219
           GRPRKD NRFAQSNGNAAP  KSGC+K A      EEEEIVMVML
Sbjct: 181 GRPRKDSNRFAQSNGNAAPEFKSGCDKPAAAAAEEEEEEIVMVML 225

[Close]

BLAST of Lcy01g012910 vs. NCBI nr
Match: XP_022952017.1 (methyl-CpG-binding domain-containing protein 8-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 370.5 bits (950), Expect = 9.6e-99
Identity = 196/215 (91.16%), Postives = 204/215 (94.88%), Query Frame = 0


Query: 1   MASTTMVASPSNDNFRMNTLPIIDLRLLSQSELYCLSRFSSSSSSSSTSQSNNDDDVLIP 60
           MASTTMVASPS+D FRMNTLPIIDLRLLSQSELYCLSRF SSSSSSS SQSNNDDDVLIP
Sbjct: 1   MASTTMVASPSDDRFRMNTLPIIDLRLLSQSELYCLSRF-SSSSSSSISQSNNDDDVLIP 60

Query: 61  KIDRSVFNESAGSRKQTYSRLRLAPRKPQFPSSSSSSTIRPQSPDRLDVESAQIITLFKQ 120
           KIDRSVFNESAGSRKQTYSRLRLAPRK QFPSSSSSSTIRPQSPDR D ESA+I+TLFKQ
Sbjct: 61  KIDRSVFNESAGSRKQTYSRLRLAPRKSQFPSSSSSSTIRPQSPDRFDEESAEIVTLFKQ 120

Query: 121 LFVGESHCAVNDTYDDGDEDLVLINHIYDESVPDSSYAIFQSIPVDIIDSSYAPIKRRRG 180
           LFVGESHC VND+YDDGDEDLVL+NHIYDESVP+SSYAIF SIPVDIIDSSYAPIKRRRG
Sbjct: 121 LFVGESHCGVNDSYDDGDEDLVLVNHIYDESVPESSYAIFHSIPVDIIDSSYAPIKRRRG 180

Query: 181 RPRKDGNRFAQSNGNAAPNSKSGCEKRAEEEEIVM 216
           RPRKD NRFAQSNGNAA NS SGC+KRAEE+EIVM
Sbjct: 181 RPRKDSNRFAQSNGNAAANSISGCDKRAEEDEIVM 214

[Close]

BLAST of Lcy01g012910 vs. TAIR 10
Match: AT1G22310.2 (methyl-CPG-binding domain 8 )

HSP 1 Score: 94.4 bits (233), Expect = 1.2e-19
Identity = 81/177 (45.76%), Postives = 104/177 (58.76%), Query Frame = 0


Query: 19  TLPIIDLRLLSQSELYCLSRFSSSSSSSSTS--QSNNDDDVLIPKIDRSVFNESAGSRKQ 78
           +LP+ID RLLSQSEL  LS+ SS S SSS S   S   DD L PKIDRSVFNESAGSRKQ
Sbjct: 25  SLPLIDTRLLSQSELRALSQCSSLSPSSSASLAASAGGDDDLTPKIDRSVFNESAGSRKQ 84

Query: 79  TYSRLRLAPRKPQFPSSSSSSTIRPQSPDRLDVESAQIITLFKQLFVGESHCAVNDTYDD 138
           T+ RLRLA R PQ P    S   + Q  D    E  Q+ +L + LF  +S+ +  +  D+
Sbjct: 85  TFLRLRLA-RHPQPPEEPPSP--QRQRDDSSREEQTQVASLLRSLFNVDSNQS-KEEEDE 144

Query: 139 GDEDLVLINHIYDESVPDSSYAIFQSIPVDIID------SSYAPIKRRRGRPRKDGN 188
           G+E+L       +  +  +SY ++Q   +D I       +S   IKR+RGRPRK  N
Sbjct: 145 GEEEL----EDNEGQIHYNSY-VYQRPNLDSIQNVLIQGTSGNKIKRKRGRPRKIRN 192

The following BLAST results are available for this feature:

BLAST of Lcy01g012910 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LME6	1.7e-18	45.76	Methyl-CpG-binding domain-containing protein 8 OS=Arabidopsis thaliana OX=3702 G...	[more]

BLAST of Lcy01g012910 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KK67	1.1e-100	91.28	methyl-CpG-binding domain-containing protein 8-like isoform X2 OS=Cucurbita maxi...	[more]
A0A6J1GJB3	1.1e-100	91.28	methyl-CpG-binding domain-containing protein 8-like isoform X2 OS=Cucurbita mosc...	[more]
A0A6J1BS27	1.5e-100	91.28	methyl-CpG-binding domain-containing protein 8 isoform X2 OS=Momordica charantia...	[more]
A0A6J1KLZ0	4.7e-99	91.16	methyl-CpG-binding domain-containing protein 8-like isoform X1 OS=Cucurbita maxi...	[more]
A0A6J1GJ84	4.7e-99	91.16	methyl-CpG-binding domain-containing protein 8-like isoform X1 OS=Cucurbita mosc...	[more]

BLAST of Lcy01g012910 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023002677.1	2.3e-100	91.28	methyl-CpG-binding domain-containing protein 8-like isoform X2 [Cucurbita maxima...	[more]
XP_022952018.1	2.3e-100	91.28	methyl-CpG-binding domain-containing protein 8-like isoform X2 [Cucurbita moscha...	[more]
XP_022132084.1	3.0e-100	91.28	methyl-CpG-binding domain-containing protein 8 isoform X2 [Momordica charantia]	[more]
XP_038885026.1	8.7e-100	89.78	methyl-CpG-binding domain-containing protein 8 isoform X2 [Benincasa hispida]	[more]
XP_022952017.1	9.6e-99	91.16	methyl-CpG-binding domain-containing protein 8-like isoform X1 [Cucurbita moscha...	[more]

BLAST of Lcy01g012910 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G22310.2	1.2e-19	45.76	methyl-CPG-binding domain 8	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 177..208
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 88..104
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 70..106
None	No IPR available	PANTHER	PTHR37701:SF1	METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 8	coord: 6..214
IPR037472	Methyl-CpG-binding domain-containing protein 8	PANTHER	PTHR37701	METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 8	coord: 6..214

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy01g012910.1	Lcy01g012910.1	mRNA