Lcy01g011700 (gene) Sponge gourd (P93075) v1

Overview
NameLcy01g011700
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionProtein of unknown function (DUF1677)
LocationChr01: 32421694 .. 32422855 (+)
RNA-Seq ExpressionLcy01g011700
SyntenyLcy01g011700
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGAAGCTCATCTGCGGCCTTTGTGCTGAGGCCGTAAACGAGGAGATGAAGAAGGTTTAAACTTTTTTTTTTTTTTTGTTTCCTATATTATTCTTTACATCTCTGTTAAATCTTTTTTTAATTTCCTCTATTTTGGACTTGGAAATTATCCACCTCAAATAAGAAATAACGATATAGGGTTAGATAATCGATTAATTTAAAAAAACATTTGAATATGTGAAAGGCGGACACAAAATTAAAAGCTCAAATATTTATTAAGCATTTTTAATACCATTTTTAAAGTTTAGAGATAAAATAAGCACAAATTTTGAGTTGAAATAAATTTTAATTTAACATTTTTTAATTTATATGCTTAATGTCAATTTCTCTTCTTTGTAGGTTTGAAAATGAATAATAATTACCTATTGATGGGTGTCTTCTACCGACTATACCATTATGTTTTTTATAACTAAGGAGAAAATAAAGCAAAAATAAAAAATACCTATCGATATTTTTTTTTAAATTTAACAAAAATAAATAAATAAAAGACGATATCATAGGAGTTCAATCACAAAATTTTTTATTTATTTATTTTTCTCAATTTAACCATGATGAAGGTGAGAGGTAAACATTCGATCTTAGAAGAGAATAATAAGTGCTATATCCATTAAACTATGCTTGGATTGAGAAACCAAAAACTTAAATTTATAAGCTATATGATATATATTTAATCATTTAGGCACAAATCATGACTCATTTTGCAATCGTGAGAGAATTCAACTATCTTTAATATTTTGTTAACAAAACCAATTATTGAATAAGCACTCATTTCATTCGGTGTCACAATTGATTTTACTAAAAACATGTGTCATATTGTAATAGTTACGACAATTTCAAACTAAGCCTTATTCGAATTTATTAATAGAGGGGTTGGAAAAGGGAGGAGGCTTTGAAGGAGCACATGAGCGCTTGCACAAAGTTCAACAGAATCGGGAGGGCGTATCCGGTGTTGTATCAGGTAGAGGCCATTAAAGAGATTCTGAAGAAAAGCTCCACCAGAGGAAAGTCCATGAGCCCAAGAGAAACGGCCGCCGGCCACCGAAATGGCAGAATTGGCCGGACCTCCAGTTGCATTCCGGCCATCACTAGAGATGTCTGTGATCCAACCATGGTCAAGTGA

mRNA sequence

ATGGGGAAGCTCATCTGCGGCCTTTGTGCTGAGGCCGTAAACGAGGAGATGAAGAAGAGGGGTTGGAAAAGGGAGGAGGCTTTGAAGGAGCACATGAGCGCTTGCACAAAGTTCAACAGAATCGGGAGGGCGTATCCGGTGTTGTATCAGGTAGAGGCCATTAAAGAGATTCTGAAGAAAAGCTCCACCAGAGGAAAGTCCATGAGCCCAAGAGAAACGGCCGCCGGCCACCGAAATGGCAGAATTGGCCGGACCTCCAGTTGCATTCCGGCCATCACTAGAGATGTCTGTGATCCAACCATGGTCAAGTGA

Coding sequence (CDS)

ATGGGGAAGCTCATCTGCGGCCTTTGTGCTGAGGCCGTAAACGAGGAGATGAAGAAGAGGGGTTGGAAAAGGGAGGAGGCTTTGAAGGAGCACATGAGCGCTTGCACAAAGTTCAACAGAATCGGGAGGGCGTATCCGGTGTTGTATCAGGTAGAGGCCATTAAAGAGATTCTGAAGAAAAGCTCCACCAGAGGAAAGTCCATGAGCCCAAGAGAAACGGCCGCCGGCCACCGAAATGGCAGAATTGGCCGGACCTCCAGTTGCATTCCGGCCATCACTAGAGATGTCTGTGATCCAACCATGGTCAAGTGA

Protein sequence

MGKLICGLCAEAVNEEMKKRGWKREEALKEHMSACTKFNRIGRAYPVLYQVEAIKEILKKSSTRGKSMSPRETAAGHRNGRIGRTSSCIPAITRDVCDPTMVK
Homology
BLAST of Lcy01g011700 vs. ExPASy TrEMBL
Match: A0A6J1K942 (uncharacterized protein LOC111491777 OS=Cucurbita maxima OX=3661 GN=LOC111491777 PE=4 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 5.3e-45
Identity = 89/103 (86.41%), Postives = 96/103 (93.20%), Query Frame = 0

Query: 1   MGKLICGLCAEAVNEEMKKRGWKREEALKEHMSACTKFNRIGRAYPVLYQVEAIKEILKK 60
           MGK+ICGLCAEAVNEEM KRGW++EE+LKEHMSAC KFNR GR YPVLYQ EAIKEILKK
Sbjct: 78  MGKMICGLCAEAVNEEMNKRGWEKEESLKEHMSACAKFNRFGRVYPVLYQAEAIKEILKK 137

Query: 61  SSTRGKSMSPRETAAGHRNGRIGRTSSCIPAITRDVCDPTMVK 104
           SSTRGKS+SPRE  AGHRNGRIGRTSSCIPAIT+DVCDPT+VK
Sbjct: 138 SSTRGKSISPREPPAGHRNGRIGRTSSCIPAITKDVCDPTLVK 180

BLAST of Lcy01g011700 vs. ExPASy TrEMBL
Match: A0A6J1HD09 (uncharacterized protein LOC111462383 OS=Cucurbita moschata OX=3662 GN=LOC111462383 PE=4 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 9.1e-45
Identity = 88/103 (85.44%), Postives = 95/103 (92.23%), Query Frame = 0

Query: 1   MGKLICGLCAEAVNEEMKKRGWKREEALKEHMSACTKFNRIGRAYPVLYQVEAIKEILKK 60
           MGK+ICGLCA+AVNEEM KRGWK+EE+L EHM+AC KFNR GR YPVLYQ EAIKEILKK
Sbjct: 59  MGKMICGLCADAVNEEMNKRGWKKEESLNEHMNACAKFNRFGRVYPVLYQAEAIKEILKK 118

Query: 61  SSTRGKSMSPRETAAGHRNGRIGRTSSCIPAITRDVCDPTMVK 104
           SSTRGKS+SPRET  GHRNGRIGRTSSCIPAITRDVCDPT+VK
Sbjct: 119 SSTRGKSISPRETPTGHRNGRIGRTSSCIPAITRDVCDPTLVK 161

BLAST of Lcy01g011700 vs. ExPASy TrEMBL
Match: A0A1S3BBP3 (uncharacterized protein LOC103488172 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103488172 PE=4 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 1.1e-37
Identity = 80/102 (78.43%), Postives = 87/102 (85.29%), Query Frame = 0

Query: 1   MGKLICGLCAEAVNEEMKKRGWKREEALKEHMSACTKFNRIGRAYPVLYQVEAIKEILKK 60
           MGKLICGLCAEAVNEEM+K+GWKREEALKEHMSAC KFNRIGR YPVLYQ EAIK+ILKK
Sbjct: 83  MGKLICGLCAEAVNEEMEKKGWKREEALKEHMSACAKFNRIGRVYPVLYQAEAIKQILKK 142

Query: 61  SSTRGKSMSPRETAAGHRNGRIGRTSSCIPAITRDVCDPTMV 103
           + T    +    TA  HR GRIGRTSSCIPA+TRD+CDPTMV
Sbjct: 143 AKTSNGGIKSAVTA--HRGGRIGRTSSCIPAVTRDICDPTMV 182

BLAST of Lcy01g011700 vs. ExPASy TrEMBL
Match: A0A1S4DW91 (uncharacterized protein LOC103488172 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103488172 PE=4 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 4.5e-36
Identity = 80/102 (78.43%), Postives = 86/102 (84.31%), Query Frame = 0

Query: 1   MGKLICGLCAEAVNEEMKKRGWKREEALKEHMSACTKFNRIGRAYPVLYQVEAIKEILKK 60
           MGKLICGLCAEAVNEEM+K GWKREEALKEHMSAC KFNRIGR YPVLYQ EAIK+ILKK
Sbjct: 83  MGKLICGLCAEAVNEEMEK-GWKREEALKEHMSACAKFNRIGRVYPVLYQAEAIKQILKK 142

Query: 61  SSTRGKSMSPRETAAGHRNGRIGRTSSCIPAITRDVCDPTMV 103
           + T    +    TA  HR GRIGRTSSCIPA+TRD+CDPTMV
Sbjct: 143 AKTSNGGIKSAVTA--HRGGRIGRTSSCIPAVTRDICDPTMV 181

BLAST of Lcy01g011700 vs. ExPASy TrEMBL
Match: A0A0A0LLX3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G373460 PE=4 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 2.2e-35
Identity = 78/103 (75.73%), Postives = 83/103 (80.58%), Query Frame = 0

Query: 1   MGKLICGLCAEAVNEEMKKRGWKREEALKEHMSACTKFNRIGRAYPVLYQVEAIKEILKK 60
           MGKLICGLCAEAVNEEM+K GWKREEALKEHMSAC KFNRIGR YPVLYQ EAIK+ILKK
Sbjct: 62  MGKLICGLCAEAVNEEMEKNGWKREEALKEHMSACAKFNRIGRVYPVLYQAEAIKQILKK 121

Query: 61  SSTRGKSMSPRETAAGHRNGRIGRTSSCIPAITRDVCDPTMVK 104
                       T + HR GRIGR+SSCIPA+ RDVCDPTMVK
Sbjct: 122 ------------TKSDHRGGRIGRSSSCIPAVGRDVCDPTMVK 152

BLAST of Lcy01g011700 vs. NCBI nr
Match: XP_023547063.1 (uncharacterized protein LOC111805983 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 193.7 bits (491), Expect = 7.6e-46
Identity = 91/103 (88.35%), Postives = 97/103 (94.17%), Query Frame = 0

Query: 1   MGKLICGLCAEAVNEEMKKRGWKREEALKEHMSACTKFNRIGRAYPVLYQVEAIKEILKK 60
           MGK+ICGLCAEAVNEEM KRGWK+EE+LKEHM+AC KFNR GR YPVLYQ EAIKEILKK
Sbjct: 78  MGKMICGLCAEAVNEEMNKRGWKKEESLKEHMNACAKFNRFGRVYPVLYQAEAIKEILKK 137

Query: 61  SSTRGKSMSPRETAAGHRNGRIGRTSSCIPAITRDVCDPTMVK 104
           SSTRGKS+SPRET AGHRNGRIGRTSSCIPAITRDVCDPT+VK
Sbjct: 138 SSTRGKSISPRETPAGHRNGRIGRTSSCIPAITRDVCDPTLVK 180

BLAST of Lcy01g011700 vs. NCBI nr
Match: KAG6598770.1 (hypothetical protein SDJN03_08548, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 193.4 bits (490), Expect = 1.0e-45
Identity = 90/103 (87.38%), Postives = 97/103 (94.17%), Query Frame = 0

Query: 1   MGKLICGLCAEAVNEEMKKRGWKREEALKEHMSACTKFNRIGRAYPVLYQVEAIKEILKK 60
           MGK++CGLCAEAVNEEM KRGWK+EE+LKEHM+AC KFNR GR YPVLYQ EAIKEILKK
Sbjct: 78  MGKMVCGLCAEAVNEEMNKRGWKKEESLKEHMNACAKFNRFGRVYPVLYQAEAIKEILKK 137

Query: 61  SSTRGKSMSPRETAAGHRNGRIGRTSSCIPAITRDVCDPTMVK 104
           SSTRGKS+SPRET AGHRNGRIGRTSSCIPAITRDVCDPT+VK
Sbjct: 138 SSTRGKSISPRETPAGHRNGRIGRTSSCIPAITRDVCDPTLVK 180

BLAST of Lcy01g011700 vs. NCBI nr
Match: XP_022996579.1 (uncharacterized protein LOC111491777 [Cucurbita maxima])

HSP 1 Score: 189.9 bits (481), Expect = 1.1e-44
Identity = 89/103 (86.41%), Postives = 96/103 (93.20%), Query Frame = 0

Query: 1   MGKLICGLCAEAVNEEMKKRGWKREEALKEHMSACTKFNRIGRAYPVLYQVEAIKEILKK 60
           MGK+ICGLCAEAVNEEM KRGW++EE+LKEHMSAC KFNR GR YPVLYQ EAIKEILKK
Sbjct: 78  MGKMICGLCAEAVNEEMNKRGWEKEESLKEHMSACAKFNRFGRVYPVLYQAEAIKEILKK 137

Query: 61  SSTRGKSMSPRETAAGHRNGRIGRTSSCIPAITRDVCDPTMVK 104
           SSTRGKS+SPRE  AGHRNGRIGRTSSCIPAIT+DVCDPT+VK
Sbjct: 138 SSTRGKSISPREPPAGHRNGRIGRTSSCIPAITKDVCDPTLVK 180

BLAST of Lcy01g011700 vs. NCBI nr
Match: XP_022961690.1 (uncharacterized protein LOC111462383 [Cucurbita moschata])

HSP 1 Score: 189.1 bits (479), Expect = 1.9e-44
Identity = 88/103 (85.44%), Postives = 95/103 (92.23%), Query Frame = 0

Query: 1   MGKLICGLCAEAVNEEMKKRGWKREEALKEHMSACTKFNRIGRAYPVLYQVEAIKEILKK 60
           MGK+ICGLCA+AVNEEM KRGWK+EE+L EHM+AC KFNR GR YPVLYQ EAIKEILKK
Sbjct: 59  MGKMICGLCADAVNEEMNKRGWKKEESLNEHMNACAKFNRFGRVYPVLYQAEAIKEILKK 118

Query: 61  SSTRGKSMSPRETAAGHRNGRIGRTSSCIPAITRDVCDPTMVK 104
           SSTRGKS+SPRET  GHRNGRIGRTSSCIPAITRDVCDPT+VK
Sbjct: 119 SSTRGKSISPRETPTGHRNGRIGRTSSCIPAITRDVCDPTLVK 161

BLAST of Lcy01g011700 vs. NCBI nr
Match: XP_008445002.1 (PREDICTED: uncharacterized protein LOC103488172 isoform X1 [Cucumis melo])

HSP 1 Score: 165.6 bits (418), Expect = 2.2e-37
Identity = 80/102 (78.43%), Postives = 87/102 (85.29%), Query Frame = 0

Query: 1   MGKLICGLCAEAVNEEMKKRGWKREEALKEHMSACTKFNRIGRAYPVLYQVEAIKEILKK 60
           MGKLICGLCAEAVNEEM+K+GWKREEALKEHMSAC KFNRIGR YPVLYQ EAIK+ILKK
Sbjct: 83  MGKLICGLCAEAVNEEMEKKGWKREEALKEHMSACAKFNRIGRVYPVLYQAEAIKQILKK 142

Query: 61  SSTRGKSMSPRETAAGHRNGRIGRTSSCIPAITRDVCDPTMV 103
           + T    +    TA  HR GRIGRTSSCIPA+TRD+CDPTMV
Sbjct: 143 AKTSNGGIKSAVTA--HRGGRIGRTSSCIPAVTRDICDPTMV 182

BLAST of Lcy01g011700 vs. TAIR 10
Match: AT5G25840.1 (Protein of unknown function (DUF1677) )

HSP 1 Score: 99.8 bits (247), Expect = 1.4e-21
Identity = 53/108 (49.07%), Postives = 73/108 (67.59%), Query Frame = 0

Query: 2   GKLICGLCAEAVNEEMKKRG-------WKREEALKEHMSACTKFNRIGRAYPVLYQVEAI 61
           GKLICGLC +AV  EM+K          +REEA+K HMSAC++FNR+GR+YPVLYQ EA+
Sbjct: 71  GKLICGLCEKAVEGEMEKMNNSEVLMEKRREEAVKVHMSACSRFNRLGRSYPVLYQAEAV 130

Query: 62  KEILKKSSTRGKSMSPRETAAGHRNGRIGRTSSCIPAITRDVCDPTMV 103
           KE+LKK S +    +  E       G + R+SSC+PA+ +++ D T+V
Sbjct: 131 KEMLKKRSKKMVGATKPE------KGGLARSSSCMPALAKELKDRTLV 172

BLAST of Lcy01g011700 vs. TAIR 10
Match: AT1G79770.1 (Protein of unknown function (DUF1677) )

HSP 1 Score: 98.6 bits (244), Expect = 3.1e-21
Identity = 53/96 (55.21%), Postives = 70/96 (72.92%), Query Frame = 0

Query: 2   GKLICGLCAEAVNEEMKKRGWK-REEALKEHMSACTKFNRIGRAYPVLYQVEAIKEILKK 61
           GK ICGLC+EAV EE  KR  +  E ALKEHMSAC +FN++GR YP L+Q +A++++L++
Sbjct: 80  GKWICGLCSEAVKEERDKREEEGLEGALKEHMSACLRFNKLGREYPALFQADAMRDMLRR 139

Query: 62  SSTRGKSMSPRETAAGHRNGRIGRTSSCIPAITRDV 97
            STRG+S+ P+          I RTSSCIPAITRD+
Sbjct: 140 -STRGQSIIPKPA--------ISRTSSCIPAITRDL 166

BLAST of Lcy01g011700 vs. TAIR 10
Match: AT1G72510.1 (Protein of unknown function (DUF1677) )

HSP 1 Score: 49.7 bits (117), Expect = 1.7e-06
Identity = 36/105 (34.29%), Postives = 52/105 (49.52%), Query Frame = 0

Query: 1   MGKLICGLCAEAVNEEM--KKRGWKREEALKEHMSACTKFNRIG-RAYPVLYQVEAIKEI 60
           MGK ICGLC+EAV  E+   KR    EEA+  HM+ C KF        P  + + A+++I
Sbjct: 61  MGKWICGLCSEAVKYEVMRTKRLLTTEEAMARHMNMCNKFKSSSPPPNPTGHLISAMRQI 120

Query: 61  LKKS-----STRGKSMSPRETAAGHR----NGRIGRTSSCIPAIT 94
           L+KS       R    SP +    H     +  + R+ SC  ++T
Sbjct: 121 LRKSLDSPRMLRSMPNSPSKDDQDHHHDCVSNVLSRSDSCFASLT 165

BLAST of Lcy01g011700 vs. TAIR 10
Match: AT1G72510.2 (Protein of unknown function (DUF1677) )

HSP 1 Score: 49.7 bits (117), Expect = 1.7e-06
Identity = 36/105 (34.29%), Postives = 52/105 (49.52%), Query Frame = 0

Query: 1   MGKLICGLCAEAVNEEM--KKRGWKREEALKEHMSACTKFNRIG-RAYPVLYQVEAIKEI 60
           MGK ICGLC+EAV  E+   KR    EEA+  HM+ C KF        P  + + A+++I
Sbjct: 61  MGKWICGLCSEAVKYEVMRTKRLLTTEEAMARHMNMCNKFKSSSPPPNPTGHLISAMRQI 120

Query: 61  LKKS-----STRGKSMSPRETAAGHR----NGRIGRTSSCIPAIT 94
           L+KS       R    SP +    H     +  + R+ SC  ++T
Sbjct: 121 LRKSLDSPRMLRSMPNSPSKDDQDHHHDCVSNVLSRSDSCFASLT 165

BLAST of Lcy01g011700 vs. TAIR 10
Match: AT4G14819.1 (Protein of unknown function (DUF1677) )

HSP 1 Score: 48.5 bits (114), Expect = 3.7e-06
Identity = 26/70 (37.14%), Postives = 41/70 (58.57%), Query Frame = 0

Query: 2  GKLICGLCAEAVNEEMKKRGWKREEALKEHMSACTKFNRIGRAYPVLYQVEAIKEILKKS 61
          GK +CGLC+EAV++E  +     EEA+  HMS C KFN    A P     + ++++L++ 
Sbjct: 31 GKWLCGLCSEAVSDEFSRSSKTVEEAVNAHMSFCGKFN----ANPAELVADGMRQMLRR- 90

Query: 62 STRGKSMSPR 72
            R   +SP+
Sbjct: 91 --RSGELSPK 93

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1K9425.3e-4586.41uncharacterized protein LOC111491777 OS=Cucurbita maxima OX=3661 GN=LOC111491777... [more]
A0A6J1HD099.1e-4585.44uncharacterized protein LOC111462383 OS=Cucurbita moschata OX=3662 GN=LOC1114623... [more]
A0A1S3BBP31.1e-3778.43uncharacterized protein LOC103488172 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... [more]
A0A1S4DW914.5e-3678.43uncharacterized protein LOC103488172 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10... [more]
A0A0A0LLX32.2e-3575.73Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G373460 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
XP_023547063.17.6e-4688.35uncharacterized protein LOC111805983 [Cucurbita pepo subsp. pepo][more]
KAG6598770.11.0e-4587.38hypothetical protein SDJN03_08548, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022996579.11.1e-4486.41uncharacterized protein LOC111491777 [Cucurbita maxima][more]
XP_022961690.11.9e-4485.44uncharacterized protein LOC111462383 [Cucurbita moschata][more]
XP_008445002.12.2e-3778.43PREDICTED: uncharacterized protein LOC103488172 isoform X1 [Cucumis melo][more]
Match NameE-valueIdentityDescription
AT5G25840.11.4e-2149.07Protein of unknown function (DUF1677) [more]
AT1G79770.13.1e-2155.21Protein of unknown function (DUF1677) [more]
AT1G72510.11.7e-0634.29Protein of unknown function (DUF1677) [more]
AT1G72510.21.7e-0634.29Protein of unknown function (DUF1677) [more]
AT4G14819.13.7e-0637.14Protein of unknown function (DUF1677) [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012876Protein of unknown function DUF1677, plantPFAMPF07911DUF1677coord: 2..60
e-value: 1.6E-17
score: 63.7
IPR012876Protein of unknown function DUF1677, plantPANTHERPTHR33108OS01G0745000 PROTEINcoord: 1..98
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 61..85
NoneNo IPR availablePANTHERPTHR33108:SF68CASP-LIKE PROTEIN (DUF1677)coord: 1..98

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy01g011700.1Lcy01g011700.1mRNA