Lcy01g010820 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy01g010820
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Reverse transcriptase domain-containing protein
Location	Chr01: 31075159 .. 31076070 (-)
RNA-Seq Expression	Lcy01g010820
Synteny	Lcy01g010820

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCATGATATTATTGATGATTGTCAGTCTGCATTTATTCATGGTCGCTCAATTGTTGATAATGTCATTCTCAATCATGAATGTTTGCATTACCTTACTCATTTTAAACGTCGCAAATCGGGTTTTGCTGCTTTAAAGCTGGATATGAGTAAGACTTATGATAGAGTGGAGTGGACGTACCTGCAACAAGTTATGCTCCAGTTGGGGTTCCATTCTAAATGGACGAACATGGTCATGCGTTGTGTGTCTTCTGCTTCCTTCTCAGTTCTTCTGAATGGAGAAGCAAGAGGATGTATCTCTCATTCTAGGGGACTCCGCCAGGGGGGTCCACTCTTGCCATATTTATTTCTTCTTTGCTCTCAAGGTCTTTCCTCCCTAATTTTGGAGGCTTTCAGATCTAATATTGTATCAGGTGTATCTATTGCTAGAACTGCTCCAAAGGTGACTCACCTTTTCTTTGCTGATGATAGTCTTATTTTCCTTAAAGCAATTGCATCCGAATTTGGTGTTTTTAAGGGTATTCTTCAAGATTATGAACGGGCTTCGGGGCAATGTATTAATTTTAGCAAGCCTGTTGTTTATTTTTCACCCTCAATTGATCATGACCGGTCGGTCTACCTGAGCCATATTCTCGCCATGAAAGTGGTTAATAATTTGGGGTGTTACCTGGGTCTATCGTCTACCTTCTCTAGAAGTAAAGGAAGAGATTTCCAACAGATCCTCGATCGAGTTTGGAAAGCTCTCCAAGGGTGGAAATCAACTTGCTTTTCAGGGGGTGGTAAGGAAGTTTTAATTAAGAGTGTTGTCCAAGCTATCCCAACTTATGCGATGAGATGTTTCAGGTTGCCTAAGTCACTTCTCTCTGATATTACCTCTATTTGCGCGAGATTCTGGGGGGTGGTACTGAAGTAA

mRNA sequence

ATGCATGATATTATTGATGATTGTCAGTCTGCATTTATTCATGGTCGCTCAATTGTTGATAATGTCATTCTCAATCATGAATGTTTGCATTACCTTACTCATTTTAAACGTCGCAAATCGGGTTTTGCTGCTTTAAAGCTGGATATGAGTAAGACTTATGATAGAGTGGAGTGGACGTACCTGCAACAAGTTATGCTCCAGTTGGGGTTCCATTCTAAATGGACGAACATGGTCATGCGTTGTGTGTCTTCTGCTTCCTTCTCAGTTCTTCTGAATGGAGAAGCAAGAGGATGTATCTCTCATTCTAGGGGACTCCGCCAGGGGGGTCCACTCTTGCCATATTTATTTCTTCTTTGCTCTCAAGGTCTTTCCTCCCTAATTTTGGAGGCTTTCAGATCTAATATTGTATCAGGTGTATCTATTGCTAGAACTGCTCCAAAGGTGACTCACCTTTTCTTTGCTGATGATAGTCTTATTTTCCTTAAAGCAATTGCATCCGAATTTGGTGTTTTTAAGGGTATTCTTCAAGATTATGAACGGGCTTCGGGGCAATGTATTAATTTTAGCAAGCCTGTTGTTTATTTTTCACCCTCAATTGATCATGACCGGTCGGTCTACCTGAGCCATATTCTCGCCATGAAAGTGGTTAATAATTTGGGGTGTTACCTGGGTCTATCGTCTACCTTCTCTAGAAGTAAAGGAAGAGATTTCCAACAGATCCTCGATCGAGTTTGGAAAGCTCTCCAAGGGTGGAAATCAACTTGCTTTTCAGGGGGTGGTAAGGAAGTTTTAATTAAGAGTGTTGTCCAAGCTATCCCAACTTATGCGATGAGATGTTTCAGGTTGCCTAAGTCACTTCTCTCTGATATTACCTCTATTTGCGCGAGATTCTGGGGGGTGGTACTGAAGTAA

Coding sequence (CDS)

ATGCATGATATTATTGATGATTGTCAGTCTGCATTTATTCATGGTCGCTCAATTGTTGATAATGTCATTCTCAATCATGAATGTTTGCATTACCTTACTCATTTTAAACGTCGCAAATCGGGTTTTGCTGCTTTAAAGCTGGATATGAGTAAGACTTATGATAGAGTGGAGTGGACGTACCTGCAACAAGTTATGCTCCAGTTGGGGTTCCATTCTAAATGGACGAACATGGTCATGCGTTGTGTGTCTTCTGCTTCCTTCTCAGTTCTTCTGAATGGAGAAGCAAGAGGATGTATCTCTCATTCTAGGGGACTCCGCCAGGGGGGTCCACTCTTGCCATATTTATTTCTTCTTTGCTCTCAAGGTCTTTCCTCCCTAATTTTGGAGGCTTTCAGATCTAATATTGTATCAGGTGTATCTATTGCTAGAACTGCTCCAAAGGTGACTCACCTTTTCTTTGCTGATGATAGTCTTATTTTCCTTAAAGCAATTGCATCCGAATTTGGTGTTTTTAAGGGTATTCTTCAAGATTATGAACGGGCTTCGGGGCAATGTATTAATTTTAGCAAGCCTGTTGTTTATTTTTCACCCTCAATTGATCATGACCGGTCGGTCTACCTGAGCCATATTCTCGCCATGAAAGTGGTTAATAATTTGGGGTGTTACCTGGGTCTATCGTCTACCTTCTCTAGAAGTAAAGGAAGAGATTTCCAACAGATCCTCGATCGAGTTTGGAAAGCTCTCCAAGGGTGGAAATCAACTTGCTTTTCAGGGGGTGGTAAGGAAGTTTTAATTAAGAGTGTTGTCCAAGCTATCCCAACTTATGCGATGAGATGTTTCAGGTTGCCTAAGTCACTTCTCTCTGATATTACCTCTATTTGCGCGAGATTCTGGGGGGTGGTACTGAAGTAA

Protein sequence

MHDIIDDCQSAFIHGRSIVDNVILNHECLHYLTHFKRRKSGFAALKLDMSKTYDRVEWTYLQQVMLQLGFHSKWTNMVMRCVSSASFSVLLNGEARGCISHSRGLRQGGPLLPYLFLLCSQGLSSLILEAFRSNIVSGVSIARTAPKVTHLFFADDSLIFLKAIASEFGVFKGILQDYERASGQCINFSKPVVYFSPSIDHDRSVYLSHILAMKVVNNLGCYLGLSSTFSRSKGRDFQQILDRVWKALQGWKSTCFSGGGKEVLIKSVVQAIPTYAMRCFRLPKSLLSDITSICARFWGVVLK

Homology

[Close]

BLAST of Lcy01g010820 vs. ExPASy Swiss-Prot
Match: P14381 (Transposon TX1 uncharacterized 149 kDa protein OS=Xenopus laevis OX=8355 PE=4 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 4.4e-12
Identity = 70/292 (23.97%), Postives = 127/292 (43.49%), Query Frame = 0


Query: 3   DIIDDCQSAFIHGRSIVDNVILNHECLHYLTHFKRRKSGFAALKLDMSKTYDRVEWTYLQ 62
           ++I   QS  + GR+I DNV L  + LH+    +R     A L LD  K +DRV+  YL 
Sbjct: 552 EVIHPDQSYTVPGRTIFDNVFLIRDLLHFA---RRTGLSLAFLSLDQEKAFDRVDHQYLI 611

Query: 63  QVMLQLGFHSKWTNMVMRCVSSASFSVLLNGEARGCISHSRGLRQGGPLLPYLFLLCSQG 122
             +    F  ++   +    +SA   V +N      ++  RG+RQG PL   L+ L  + 
Sbjct: 612 GTLQAYSFGPQFVGYLKTMYASAECLVKINWSLTAPLAFGRGVRQGCPLSGQLYSLAIEP 671

Query: 123 LSSLILEAFRSNIVSGVSIARTAPKVTHLFFADDSLIFLKAIASEFGVFKGILQDYERAS 182
              L+ +      ++G+ +     +V    +ADD ++  + +  +    +   + Y  AS
Sbjct: 672 FLCLLRKR-----LTGLVLKEPDMRVVLSAYADDVILVAQDLV-DLERAQECQEVYAAAS 731

Query: 183 GQCINFSKP--VVYFSPSIDHDRSVYLSHILAMKVVNNLGCYLGLSSTFSRSKGRDFQQI 242
              IN+SK   ++  S  +D     +       K++  LG YL   S       ++F ++
Sbjct: 732 SARINWSKSSGLLEGSLKVDFLPPAFRDISWESKIIKYLGVYL---SAEEYPVSQNFIEL 791

Query: 243 LDRVWKALQGWK--STCFSGGGKEVLIKSVVQAIPTYAMRCFRLPKSLLSDI 291
            + V   L  WK  +   S  G+ ++I  +V +   Y + C    +  ++ I
Sbjct: 792 EECVLTRLGKWKGFAKVLSMRGRALVINQLVASQIWYRLICLSPTQEFIAKI 831

[Close]

BLAST of Lcy01g010820 vs. ExPASy Swiss-Prot
Match: P92555 (Uncharacterized mitochondrial protein AtMg01250 OS=Arabidopsis thaliana OX=3702 GN=AtMg01250 PE=4 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 3.8e-11
Identity = 30/68 (44.12%), Postives = 46/68 (67.65%), Query Frame = 0


Query: 90  LLNGEARGCISHSRGLRQGGPLLPYLFLLCSQGLSSLILEAFRSNIVSGVSIARTAPKVT 149
           ++NG  +G ++ SRGLRQG PL PYLF+LC++ LS L   A     + G+ ++  +P++ 
Sbjct: 13  IINGAPQGLVTPSRGLRQGDPLSPYLFILCTEVLSGLCRRAQEQGRLPGIRVSNNSPRIN 72

Query: 150 HLFFADDS 158
           HL FADD+
Sbjct: 73  HLLFADDT 80

[Close]

BLAST of Lcy01g010820 vs. ExPASy TrEMBL
Match: A0A2N9E9A1 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS3428 PE=4 SV=1)

HSP 1 Score: 312.8 bits (800), Expect = 1.6e-81
Identity = 153/295 (51.86%), Postives = 198/295 (67.12%), Query Frame = 0


Query: 4    IIDDCQSAFIHGRSIVDNVILNHECLHYLTHFKRRKSGFAALKLDMSKTYDRVEWTYLQQ 63
            I+ + QSAF+ GR I DN+++  E LH++   +R KSG  ALKLDMSK YDRVEW YL++
Sbjct: 955  IVSESQSAFVPGRLITDNILVAFETLHHMHQQRRGKSGSVALKLDMSKAYDRVEWKYLER 1014

Query: 64   VMLQLGFHSKWTNMVMRCVSSASFSVLLNGEARGCISHSRGLRQGGPLLPYLFLLCSQGL 123
            VM Q+GFH KW  ++M C+S+ S+S+L+NGE  G I  SRGLRQG PL PYLFL C++GL
Sbjct: 1015 VMQQMGFHEKWVKIMMECISTVSYSILINGEPHGYIKPSRGLRQGDPLSPYLFLFCAEGL 1074

Query: 124  SSLILEAFRSNIVSGVSIARTAPKVTHLFFADDSLIFLKAIASEFGVFKGILQDYERASG 183
             SL+ +A     + GVSI+R  PK+THLFFADDSL+F KA  +E    + IL  YE ASG
Sbjct: 1075 HSLLQQAKNEGNMCGVSISRCGPKLTHLFFADDSLLFCKATTNEVRCIQDILTAYEHASG 1134

Query: 184  QCINFSKPVVYFSPSIDHDRSVYLSHILAMKVVNNLGCYLGLSSTFSRSKGRDFQQILDR 243
            Q IN  K  ++FS S       ++  +L + V++    YLGL S   R+K   F QI +R
Sbjct: 1135 QQINRQKTTLFFSKSTPRPIQNHIQVMLGVPVIHQYEKYLGLPSFIGRAKYSSFAQIKER 1194

Query: 244  VWKALQGWKSTCFSGGGKEVLIKSVVQAIPTYAMRCFRLPKSLLSDITSICARFW 299
            VW  L+GWK    S  GKE+LIKSV QAIPTYAM CFRLP+ L+ +I  +  RFW
Sbjct: 1195 VWSKLKGWKEKLISQAGKEILIKSVAQAIPTYAMSCFRLPQRLIKEIEILIRRFW 1249

[Close]

BLAST of Lcy01g010820 vs. ExPASy TrEMBL
Match: A0A2N9H9Z1 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS36281 PE=4 SV=1)

HSP 1 Score: 312.4 bits (799), Expect = 2.1e-81
Identity = 148/295 (50.17%), Postives = 201/295 (68.14%), Query Frame = 0


Query: 4   IIDDCQSAFIHGRSIVDNVILNHECLHYLTHFKRRKSGFAALKLDMSKTYDRVEWTYLQQ 63
           +I D QSAF+ GR I DNV+   E +HYL + +  K+   A KLDMSK YDRVEW +L++
Sbjct: 113 VISDSQSAFVPGRMITDNVMTAFEVVHYLKNLRVGKNAQMAAKLDMSKAYDRVEWDFLKE 172

Query: 64  VMLQLGFHSKWTNMVMRCVSSASFSVLLNGEARGCISHSRGLRQGGPLLPYLFLLCSQGL 123
           + L+LGFH +W ++VM CV+S S++V +NGE +G I  SRGLRQG PL PYLFL+C++GL
Sbjct: 173 IFLKLGFHVRWVHLVMECVTSVSYAVKVNGEPKGHIKPSRGLRQGDPLSPYLFLICAEGL 232

Query: 124 SSLILEAFRSNIVSGVSIARTAPKVTHLFFADDSLIFLKAIASEFGVFKGILQDYERASG 183
           S+L+ +A R N++ GV+I R +P+++HLFFADDS+IF +A  ++       L  YERASG
Sbjct: 233 SALLRKAERDNLIQGVAICRGSPRISHLFFADDSVIFCRATNADCVALHNALSLYERASG 292

Query: 184 QCINFSKPVVYFSPSIDHDRSVYLSHILAMKVVNNLGCYLGLSSTFSRSKGRDFQQILDR 243
           Q +N +K  ++FSP+  HD    ++ +       +   YLGL     RSK R F +I DR
Sbjct: 293 QKVNGNKTALFFSPNTPHDTRTSITTLFGTSPTTHFEKYLGLPPVMGRSKKRAFNEIKDR 352

Query: 244 VWKALQGWKSTCFSGGGKEVLIKSVVQAIPTYAMRCFRLPKSLLSDITSICARFW 299
           VW+ LQGWK    S  G+EVLIK+V+QAIPTYAM CF+ P  L SDI S+  RFW
Sbjct: 353 VWRRLQGWKEKLLSQAGREVLIKAVIQAIPTYAMSCFKFPAGLCSDICSMANRFW 407

[Close]

BLAST of Lcy01g010820 vs. ExPASy TrEMBL
Match: A0A2N9F2M3 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS13109 PE=4 SV=1)

HSP 1 Score: 312.0 bits (798), Expect = 2.7e-81
Identity = 147/295 (49.83%), Postives = 201/295 (68.14%), Query Frame = 0


Query: 4    IIDDCQSAFIHGRSIVDNVILNHECLHYLTHFKRRKSGFAALKLDMSKTYDRVEWTYLQQ 63
            +I D QSAF+ GR I DNV+   E +HYL + +  K+   A KLDMSK YDRVEW +L++
Sbjct: 1009 VISDSQSAFVPGRMITDNVMTAFEVVHYLKNLRVGKNAQMAAKLDMSKAYDRVEWDFLKE 1068

Query: 64   VMLQLGFHSKWTNMVMRCVSSASFSVLLNGEARGCISHSRGLRQGGPLLPYLFLLCSQGL 123
            + L+LGFH +W ++VM CV+S S++V +NGE +G I  SRGLRQG PL PYLFL+C++GL
Sbjct: 1069 IFLKLGFHVRWVHLVMECVTSVSYAVKVNGEPKGHIKPSRGLRQGDPLSPYLFLICAEGL 1128

Query: 124  SSLILEAFRSNIVSGVSIARTAPKVTHLFFADDSLIFLKAIASEFGVFKGILQDYERASG 183
            S+L+ +A R N++ GV+I R +P+++HLFFADDS+IF +A  ++       L  YERASG
Sbjct: 1129 SALLRKAERDNLIQGVAICRGSPRISHLFFADDSVIFCRATNADCVALHNALSLYERASG 1188

Query: 184  QCINFSKPVVYFSPSIDHDRSVYLSHILAMKVVNNLGCYLGLSSTFSRSKGRDFQQILDR 243
            Q +N +K  ++FSP+  HD    ++ +       +   YLGL     RSK R F +I DR
Sbjct: 1189 QKVNGNKTALFFSPNTPHDTRTSITTLFGTSPTTHFEKYLGLPPVMGRSKKRAFNEIKDR 1248

Query: 244  VWKALQGWKSTCFSGGGKEVLIKSVVQAIPTYAMRCFRLPKSLLSDITSICARFW 299
            VW+ LQGWK    S  G+EVLIK+++QAIPTYAM CF+ P  L SDI S+  RFW
Sbjct: 1249 VWRRLQGWKEKLLSQAGREVLIKAIIQAIPTYAMSCFKFPAGLCSDICSMANRFW 1303

[Close]

BLAST of Lcy01g010820 vs. ExPASy TrEMBL
Match: A0A2N9GZI9 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS35549 PE=4 SV=1)

HSP 1 Score: 310.5 bits (794), Expect = 8.0e-81
Identity = 152/292 (52.05%), Postives = 196/292 (67.12%), Query Frame = 0


Query: 7    DCQSAFIHGRSIVDNVILNHECLHYLTHFKRRKSGFAALKLDMSKTYDRVEWTYLQQVML 66
            + QSAF+ GR I DN+++  E LH++   +R KSG  ALKLDMSK YDRVEW YL++VM 
Sbjct: 751  ESQSAFVPGRLITDNILVAFETLHHMHQQRRGKSGSVALKLDMSKAYDRVEWKYLERVMQ 810

Query: 67   QLGFHSKWTNMVMRCVSSASFSVLLNGEARGCISHSRGLRQGGPLLPYLFLLCSQGLSSL 126
            Q+GFH KW  ++M C+S+ S+S+L+NGE  G I  SRGLRQG PL PYLFL C++GL SL
Sbjct: 811  QMGFHEKWVKIMMECISTVSYSILINGEPHGYIKPSRGLRQGDPLSPYLFLFCAEGLHSL 870

Query: 127  ILEAFRSNIVSGVSIARTAPKVTHLFFADDSLIFLKAIASEFGVFKGILQDYERASGQCI 186
            + +A     + GVSI+R  PK+THLFFADDSL+F KA  +E    + IL  YE ASGQ I
Sbjct: 871  LQQAKNEGNMCGVSISRCGPKLTHLFFADDSLLFCKATTNEVRCIQDILTAYEHASGQQI 930

Query: 187  NFSKPVVYFSPSIDHDRSVYLSHILAMKVVNNLGCYLGLSSTFSRSKGRDFQQILDRVWK 246
            N  K  ++FS S       ++  +L + V++    YLGL S   R+K   F QI +RVW 
Sbjct: 931  NRQKTTLFFSKSTPRPIQNHIQVMLGVPVIHQYEKYLGLPSFIGRAKYSSFAQIKERVWS 990

Query: 247  ALQGWKSTCFSGGGKEVLIKSVVQAIPTYAMRCFRLPKSLLSDITSICARFW 299
             L+GWK    S  GKE+LIKSV QAIPTYAM CFRLP+ L+ +I  +  RFW
Sbjct: 991  KLKGWKEKLISQAGKEILIKSVAQAIPTYAMSCFRLPQRLIKEIEILIRRFW 1042

[Close]

BLAST of Lcy01g010820 vs. ExPASy TrEMBL
Match: A0A5B7BN08 (Reverse transcriptase domain-containing protein OS=Davidia involucrata OX=16924 GN=Din_039618 PE=4 SV=1)

HSP 1 Score: 309.7 bits (792), Expect = 1.4e-80
Identity = 145/296 (48.99%), Postives = 203/296 (68.58%), Query Frame = 0


Query: 3   DIIDDCQSAFIHGRSIVDNVILNHECLHYLTHFKRRKSGFAALKLDMSKTYDRVEWTYLQ 62
           +II + QSAF+ GR I DN+++  E +H L + ++ K G +ALKLDMSK YDRVEW++L+
Sbjct: 121 NIIAESQSAFVPGRLITDNILVAFELIHCLKNKRKGKMGQSALKLDMSKAYDRVEWSFLE 180

Query: 63  QVMLQLGFHSKWTNMVMRCVSSASFSVLLNGEARGCISHSRGLRQGGPLLPYLFLLCSQG 122
            VML++GFH KW +++M CVS+ SFSVL+NG+ RGCI  +RGLRQG PL PYLF+LC++ 
Sbjct: 181 AVMLRMGFHQKWVDLIMHCVSTVSFSVLINGDPRGCIKPTRGLRQGDPLSPYLFILCAEA 240

Query: 123 LSSLILEAFRSNIVSGVSIARTAPKVTHLFFADDSLIFLKAIASEFGVFKGILQDYERAS 182
            S+L+ ++   N + G+S+AR AP+V+HLFFADDSL+F  A  ++      I+  Y  AS
Sbjct: 241 FSALLRKSENENKIHGISVARNAPRVSHLFFADDSLLFANATENQASEISRIISMYGAAS 300

Query: 183 GQCINFSKPVVYFSPSIDHDRSVYLSHILAMKVVNNLGCYLGLSSTFSRSKGRDFQQILD 242
           GQ +NF K  + FS ++  DR   +  IL + + +    YLGL ST  RSK + F  I D
Sbjct: 301 GQQVNFEKSAISFSANVTADRREQIKQILGVSICSIHNKYLGLPSTIGRSKVQPFNLIRD 360

Query: 243 RVWKALQGWKSTCFSGGGKEVLIKSVVQAIPTYAMRCFRLPKSLLSDITSICARFW 299
           RVW+ L+GWK    S  G+EVLIKSV QAIPTY M CF++P ++  +I  + + FW
Sbjct: 361 RVWRKLKGWKEKLLSKAGREVLIKSVAQAIPTYMMSCFKIPVAICEEINRMVSNFW 416

[Close]

BLAST of Lcy01g010820 vs. NCBI nr
Match: XP_023881891.1 (uncharacterized protein LOC111994244 [Quercus suber])

HSP 1 Score: 300.1 bits (767), Expect = 2.2e-77
Identity = 149/295 (50.51%), Postives = 197/295 (66.78%), Query Frame = 0


Query: 4   IIDDCQSAFIHGRSIVDNVILNHECLHYLTHFKRRKSGFAALKLDMSKTYDRVEWTYLQQ 63
           II + QSAF+ GR I DNV++  E +HYL H K  K GFAA+KLDMSK YDRVEW +++Q
Sbjct: 372 IISENQSAFLSGRLITDNVLVAFELMHYLEHKKEGKEGFAAIKLDMSKAYDRVEWGFIKQ 431

Query: 64  VMLQLGFHSKWTNMVMRCVSSASFSVLLNGEARGCISHSRGLRQGGPLLPYLFLLCSQGL 123
           VM ++GFH KW  +VM C++S S+S+L+NG A G I+ +RGLRQG P+ PY+FLLC+ G 
Sbjct: 432 VMEKMGFHEKWIKLVMHCITSVSYSILVNGGAYGSITPTRGLRQGDPISPYIFLLCADGF 491

Query: 124 SSLILEAFRSNIVSGVSIARTAPKVTHLFFADDSLIFLKAIASEFGVFKGILQDYERASG 183
           SSL+ +  R   +SGVSI R  PK+THLFFADDSL+F KA + E      ILQ YE ASG
Sbjct: 492 SSLLNDVARKLRISGVSICRGCPKITHLFFADDSLLFCKANSQECQTLIDILQLYEDASG 551

Query: 184 QCINFSKPVVYFSPSIDHDRSVYLSHILAMKVVNNLGCYLGLSSTFSRSKGRDFQQILDR 243
           Q IN  K  V+FS +   ++   +  +L          YLGL S   +SK   F ++ +R
Sbjct: 552 QKINVDKSSVFFSNNTPDEKRCEVLRMLGHMQDTRHKKYLGLPSIIGKSKVEIFAEVKER 611

Query: 244 VWKALQGWKSTCFSGGGKEVLIKSVVQAIPTYAMRCFRLPKSLLSDITSICARFW 299
           V + L GWK    S GG+E+LIK+V QAIPTY M CF++PK+L  +I ++  RFW
Sbjct: 612 VERKLSGWKEKLLSVGGREILIKAVAQAIPTYTMSCFQIPKTLCEEIEAMMRRFW 666

[Close]

BLAST of Lcy01g010820 vs. NCBI nr
Match: XP_023909336.1 (uncharacterized protein LOC112020997 [Quercus suber])

HSP 1 Score: 298.5 bits (763), Expect = 6.5e-77
Identity = 144/295 (48.81%), Postives = 198/295 (67.12%), Query Frame = 0


Query: 4   IIDDCQSAFIHGRSIVDNVILNHECLHYLTHFKRRKSGFAALKLDMSKTYDRVEWTYLQQ 63
           +I D QSAF+  R I DN+++  E LH+L + ++ K+G+ ALKLDMSK YDRVEWT+L+ 
Sbjct: 540 LISDSQSAFLSNRLITDNILIAFETLHHLKNKRKGKTGYMALKLDMSKAYDRVEWTFLEN 599

Query: 64  VMLQLGFHSKWTNMVMRCVSSASFSVLLNGEARGCISHSRGLRQGGPLLPYLFLLCSQGL 123
           +M +LGF  KW +++  C+S+ SFS+L+NG   G I   RGLRQG PL PYLFLLC++GL
Sbjct: 600 LMDKLGFARKWIDLIKSCISTVSFSILINGAPYGLIHPQRGLRQGDPLSPYLFLLCAEGL 659

Query: 124 SSLILEAFRSNIVSGVSIARTAPKVTHLFFADDSLIFLKAIASEFGVFKGILQDYERASG 183
            +LI +A  +  +SGVS+ R  P+VTHL FADDSL+  KA + E      +L+ YERASG
Sbjct: 660 HALIKQAATNGTISGVSLCREGPRVTHLLFADDSLLLCKANSRECNSVLELLEKYERASG 719

Query: 184 QCINFSKPVVYFSPSIDHDRSVYLSHILAMKVVNNLGCYLGLSSTFSRSKGRDFQQILDR 243
           Q IN  K  ++FS + +      +   L + V + L  YLGL S   R K + F  I +R
Sbjct: 720 QRINRDKTQLFFSSNTNQQTRNSIKSSLGVAVSHQLDKYLGLPSFVGRGKKQSFSYIRER 779

Query: 244 VWKALQGWKSTCFSGGGKEVLIKSVVQAIPTYAMRCFRLPKSLLSDITSICARFW 299
           +W+ +QGWK    S  GKEVLIKS++QA+PTY+M CF+LP+SL  DI S+  +FW
Sbjct: 780 IWQKIQGWKEKLLSQAGKEVLIKSILQAMPTYSMNCFKLPRSLCKDIESLIRKFW 834

[Close]

BLAST of Lcy01g010820 vs. NCBI nr
Match: XP_030939975.1 (uncharacterized protein LOC115964883 [Quercus lobata])

HSP 1 Score: 298.1 bits (762), Expect = 8.5e-77
Identity = 146/295 (49.49%), Postives = 196/295 (66.44%), Query Frame = 0


Query: 4   IIDDCQSAFIHGRSIVDNVILNHECLHYLTHFKRRKSGFAALKLDMSKTYDRVEWTYLQQ 63
           ++ + QSAF+  R I DN+++  E LH+L    + KSGF A+KLDMSK YDRVEW +L++
Sbjct: 511 LVSESQSAFMSDRLISDNILVAFETLHHLKTKTKGKSGFMAIKLDMSKAYDRVEWAFLEK 570

Query: 64  VMLQLGFHSKWTNMVMRCVSSASFSVLLNGEARGCISHSRGLRQGGPLLPYLFLLCSQGL 123
           VM +LGF ++W  +V  C+ S SFSVL+NGE  G  + +RGLRQG PL PYLFLLC++GL
Sbjct: 571 VMEKLGFDNRWITLVSSCIRSVSFSVLVNGEPHGNFTPNRGLRQGDPLSPYLFLLCAEGL 630

Query: 124 SSLILEAFRSNIVSGVSIARTAPKVTHLFFADDSLIFLKAIASEFGVFKGILQDYERASG 183
            SLI +A  S  + GVS+  T PKV+HLFFADDSL+F +A + E      IL+ YE ASG
Sbjct: 631 HSLIQQAEISGTIKGVSLCSTGPKVSHLFFADDSLLFCRANSQEASSIMEILKQYEEASG 690

Query: 184 QCINFSKPVVYFSPSIDHDRSVYLSHILAMKVVNNLGCYLGLSSTFSRSKGRDFQQILDR 243
           Q IN  K  ++FSP+ D      +  +L +    N   YLGL S   R K + F  I +R
Sbjct: 691 QQINREKTQLFFSPNTDPHVQEEIKTLLGVATTTNYEKYLGLPSFVGRGKKQSFGYIRER 750

Query: 244 VWKALQGWKSTCFSGGGKEVLIKSVVQAIPTYAMRCFRLPKSLLSDITSICARFW 299
           +W  +QGWK    S GG+EVLIK+V+QA+PT+ M CF++PKSL  DI S+  +FW
Sbjct: 751 IWHKMQGWKERLLSQGGREVLIKAVLQAMPTFTMGCFKIPKSLCKDIESLIRKFW 805

[Close]

BLAST of Lcy01g010820 vs. NCBI nr
Match: XP_030946812.1 (uncharacterized protein LOC115971195 [Quercus lobata])

HSP 1 Score: 297.7 bits (761), Expect = 1.1e-76
Identity = 146/295 (49.49%), Postives = 196/295 (66.44%), Query Frame = 0


Query: 4   IIDDCQSAFIHGRSIVDNVILNHECLHYLTHFKRRKSGFAALKLDMSKTYDRVEWTYLQQ 63
           ++ + QSAF+  R I DN+++  E LH+L    + K+GF A+KLDMSK YDRVEW +L++
Sbjct: 540 LVSESQSAFMSDRLISDNILVAFETLHHLKTKTKGKTGFMAIKLDMSKAYDRVEWAFLEK 599

Query: 64  VMLQLGFHSKWTNMVMRCVSSASFSVLLNGEARGCISHSRGLRQGGPLLPYLFLLCSQGL 123
           VM +LGF ++W  +V  C+ S SFSVL+NGE  G  + +RGLRQG PL PYLFLLC++GL
Sbjct: 600 VMEKLGFDNRWITLVSSCIRSVSFSVLVNGEPHGNFTPNRGLRQGDPLSPYLFLLCAEGL 659

Query: 124 SSLILEAFRSNIVSGVSIARTAPKVTHLFFADDSLIFLKAIASEFGVFKGILQDYERASG 183
            SLI +   S  + GVS+  T PKV+HLFFADDSL+F +A + E      IL+ YE ASG
Sbjct: 660 HSLIQQVEISGSIKGVSLCSTVPKVSHLFFADDSLLFCRANSQEVSSIMEILKQYEEASG 719

Query: 184 QCINFSKPVVYFSPSIDHDRSVYLSHILAMKVVNNLGCYLGLSSTFSRSKGRDFQQILDR 243
           Q IN  K  ++FSP+ D      +  +L +    N   YLGL S   R K + F  I +R
Sbjct: 720 QQINREKTQLFFSPNTDPHVQEEIKTLLGVAATTNYEKYLGLPSFVGRGKKQSFAYIRER 779

Query: 244 VWKALQGWKSTCFSGGGKEVLIKSVVQAIPTYAMRCFRLPKSLLSDITSICARFW 299
           VW+ +QGWK    S GG+EVLIK+V+QA+PT+ M CF+LPKSL  DI S+  +FW
Sbjct: 780 VWQKMQGWKERLLSQGGREVLIKAVLQAMPTFTMGCFKLPKSLCKDIESLIRKFW 834

[Close]

BLAST of Lcy01g010820 vs. NCBI nr
Match: XP_030939568.1 (uncharacterized protein LOC115964386 [Quercus lobata])

HSP 1 Score: 297.4 bits (760), Expect = 1.4e-76
Identity = 142/295 (48.14%), Postives = 199/295 (67.46%), Query Frame = 0


Query: 4   IIDDCQSAFIHGRSIVDNVILNHECLHYLTHFKRRKSGFAALKLDMSKTYDRVEWTYLQQ 63
           ++ + QSAF+  R I DN+++  E LH++ + ++ KSGF ALKLDMSK YDRVEW +L++
Sbjct: 392 LVYESQSAFMSNRLISDNILVAFETLHHIKNKRKGKSGFMALKLDMSKAYDRVEWLFLEK 451

Query: 64  VMLQLGFHSKWTNMVMRCVSSASFSVLLNGEARGCISHSRGLRQGGPLLPYLFLLCSQGL 123
           +M +LGF S+W +++  C+ + SFSVL+NGE  G  + +RGLRQG PL PYLFLLC++GL
Sbjct: 452 LMEKLGFGSRWISLISSCMRTVSFSVLINGEPHGHFTPNRGLRQGDPLSPYLFLLCAEGL 511

Query: 124 SSLILEAFRSNIVSGVSIARTAPKVTHLFFADDSLIFLKAIASEFGVFKGILQDYERASG 183
            SLI +A     + GVS+ R  PKV+HLFFADDSL+F +A   +      IL  YERASG
Sbjct: 512 HSLIQQAECFGSLRGVSLCRAGPKVSHLFFADDSLLFCRANQKDSNTILEILHQYERASG 571

Query: 184 QCINFSKPVVYFSPSIDHDRSVYLSHILAMKVVNNLGCYLGLSSTFSRSKGRDFQQILDR 243
           Q IN  K  ++FSP+ DH    ++   + +   +++  YLGL +   R K + F  I +R
Sbjct: 572 QQINREKTQLFFSPNTDHAMQEHIKSKIGVSATHHIESYLGLPTFVGRGKKKSFSYIRER 631

Query: 244 VWKALQGWKSTCFSGGGKEVLIKSVVQAIPTYAMRCFRLPKSLLSDITSICARFW 299
           +W  +QGWK    S GG+EVLIK+V+QA+P+Y M CF LPKSL  DI S+  +FW
Sbjct: 632 IWHKIQGWKEKLLSQGGREVLIKAVLQAMPSYTMGCFLLPKSLCKDIESLIRKFW 686

[Close]

BLAST of Lcy01g010820 vs. TAIR 10
Match: ATMG01250.1 (RNA-directed DNA polymerase (reverse transcriptase) )

HSP 1 Score: 70.5 bits (171), Expect = 2.7e-12
Identity = 30/68 (44.12%), Postives = 46/68 (67.65%), Query Frame = 0


Query: 90  LLNGEARGCISHSRGLRQGGPLLPYLFLLCSQGLSSLILEAFRSNIVSGVSIARTAPKVT 149
           ++NG  +G ++ SRGLRQG PL PYLF+LC++ LS L   A     + G+ ++  +P++ 
Sbjct: 13  IINGAPQGLVTPSRGLRQGDPLSPYLFILCTEVLSGLCRRAQEQGRLPGIRVSNNSPRIN 72

Query: 150 HLFFADDS 158
           HL FADD+
Sbjct: 73  HLLFADDT 80

[Close]

BLAST of Lcy01g010820 vs. TAIR 10
Match: AT4G20520.1 (RNA binding;RNA-directed DNA polymerases )

HSP 1 Score: 62.0 bits (149), Expect = 9.5e-10
Identity = 29/85 (34.12%), Postives = 45/85 (52.94%), Query Frame = 0


Query: 1  MHDIIDDCQSAFIHGRSIVDNVILNHECLHYLTHFKRRKSGFAALKLDMSKTYDRVEWTY 60
          M ++I   Q++FI GR   DN++   E +H +   K+   G+  LKLD+ K YDR+ W Y
Sbjct: 9  MTNLIGPAQASFIPGRVSTDNIVFVQEAVHSMRR-KKGVKGWMLLKLDLEKAYDRIRWDY 68

Query: 61 LQQVMLQLGFHSKWTNMVMRCVSSA 86
          L+  ++  GF   W   + R    A
Sbjct: 69 LEDTLISAGFPEVWLPEIARSTFGA 92

The following BLAST results are available for this feature:

BLAST of Lcy01g010820 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P14381	4.4e-12	23.97	Transposon TX1 uncharacterized 149 kDa protein OS=Xenopus laevis OX=8355 PE=4 SV...	[more]
P92555	3.8e-11	44.12	Uncharacterized mitochondrial protein AtMg01250 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of Lcy01g010820 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A2N9E9A1	1.6e-81	51.86	Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=F...	[more]
A0A2N9H9Z1	2.1e-81	50.17	Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=F...	[more]
A0A2N9F2M3	2.7e-81	49.83	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS13109 PE=4 SV=1	[more]
A0A2N9GZI9	8.0e-81	52.05	Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=F...	[more]
A0A5B7BN08	1.4e-80	48.99	Reverse transcriptase domain-containing protein OS=Davidia involucrata OX=16924 ...	[more]

BLAST of Lcy01g010820 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023881891.1	2.2e-77	50.51	uncharacterized protein LOC111994244 [Quercus suber]	[more]
XP_023909336.1	6.5e-77	48.81	uncharacterized protein LOC112020997 [Quercus suber]	[more]
XP_030939975.1	8.5e-77	49.49	uncharacterized protein LOC115964883 [Quercus lobata]	[more]
XP_030946812.1	1.1e-76	49.49	uncharacterized protein LOC115971195 [Quercus lobata]	[more]
XP_030939568.1	1.4e-76	48.14	uncharacterized protein LOC115964386 [Quercus lobata]	[more]

BLAST of Lcy01g010820 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG01250.1	2.7e-12	44.12	RNA-directed DNA polymerase (reverse transcriptase)	[more]
AT4G20520.1	9.5e-10	34.12	RNA binding;RNA-directed DNA polymerases	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 4..194 e-value: 5.0E-24 score: 85.1
IPR000477	Reverse transcriptase domain	PROSITE	PS50878	RT_POL	coord: 1..211 score: 9.408591
None	No IPR available	PANTHER	PTHR33116	REVERSE TRANSCRIPTASE ZINC-BINDING DOMAIN-CONTAINING PROTEIN-RELATED-RELATED	coord: 24..298
None	No IPR available	PANTHER	PTHR33116:SF45	SUBFAMILY NOT NAMED	coord: 24..298
None	No IPR available	CDD	cd01650	RT_nLTR_like	coord: 1..225 e-value: 8.75064E-31 score: 113.155
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 40..210

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy01g010820.1	Lcy01g010820.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0090304	nucleic acid metabolic process
molecular_function	GO:0003824	catalytic activity