Lcy01g010640 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy01g010640
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	CCHC-type domain-containing protein
Location	Chr01: 30583427 .. 30598141 (+)
RNA-Seq Expression	Lcy01g010640
Synteny	Lcy01g010640

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGACTGAAGGTACAGTAGAGGAAGTAAGGTACGGCTGGAGGGGAAGGAACAGTATAAGTCAAATCAATATTGGGAAGGGAAACAGAAGGAATGGAGGGGTTAAACGATGAATGTGAATCGTGGGAACAAGAAACAAAGGATACAGAAGAAGGAATAGATGAGTTGGAAAAGGGAAAAATATGTTCATCAAACTTGACATGTCGAGAAATATAGAACTTATCATGAGCAAGATCATAGCACAAGTAACCCTTATAACCAAGGGGATAACCAAGAAACACACACTGAGTGGTACGAGGTTGAAGTTTATTGGTGTTGTAAGGATGTAACAGAGGATAACAGGCACACCCGAAGACACGAAGAGAGGTACAATCGAGAGGAGTTTTGAAAAGAAGTTCAAAGGGAGATTTATGGCCAAGATTTGGAGAAGACAATCTATTAATAAGAAAAACTGCCGTTGCAAAAGCAAAGCACCAAAAGCGCATTGGAACAGAGGATTTAGACATGAGTGATAAGGCCATATCAACAATGTGACGGTGCTTTCGTTCAGCAACTCCGTTTTGCTCGGGTGTATAGGGACAAGATTTTTGGTGCAATATACCACGAGTGGTGAGGAAATTTTGAAAATTATGACTAAGATATTCACCCCCACCATCACTTCGAAAAGTTTTAAGTTTGGAGGAAATTAAATTTTCAAAAAATGGAAGAAAATTAGTAAAGGTCGAATAGACATCAGATTTATAACACATAGGAAAAAGCTACGTATATCGGGAAAAATCATCAACAAAGGATACGTAATATCTATGACCATTTATTGATTTTTCAGGGGCAGGGCCCCATACATCACTGTGAAGAAGCTCCAAAGGAGCATATGAAACAGTAGAAGACAGAGGAAAGGATTGTTTGGACAGTTTACCATCAAGGCAGTACTTACAAAGACCAATATCAGAAAAGGCAGCAGGAATACATGAAGAGTTCAAAATAGAACGTAAAACAGAGACAGAAGGGTGGCCTAACCTATCATGCCACACAGCAGTAGAGTCCTTGACACCCACTTGAGCCACGAGGTTTACTTGTGCTGATGATCTAGATGAGCTCGGTCCAGTAGAAATAGGGTAGAGGTCATTGATGCTAGGACCGTGAAAAAGAACTTTGCCCGTGATTTTGTCCTGAATAGTGAAGGATGTGTTGGATTTTATGCCCTAAAACTCGTAGATAGTAAATGTAAATTTGACCGAACATTAATAAAAGTGATGTATTATTCAATGTTTGTATTATATCTTGTCTTATCAACCCTAATCCAATAAACTAAACATCCAAGGCTAATAGAATGAGGCTTGAATTAGTATGTAGAGACATACGGGGATCAATGTTCAAGTTTTAGCCTAAAGGGTCTGTAGTATAGGGATAAGGCTGGGTACCTTATCCTGGTGACACTATGGATACGGCCCGCTTTGTATAATGATACAAACGTAATGATCCAATGCGTTCATGTAGGTGACATGCGAGTGAGGGTATCCTGTGCAATGAGTTTGCACAAAGGCCGGACCGCGAAATAGTTAACCACTAACTGTAACACCGTTAGTTAGCTCGGTTTCTATTTCACTAGGATGACCTAGGCAACTTGGCCTTAATCCTGAGTGGATTATGGACTCCTGTCCATGAGGGATTGTCCTTTGATTTGTACGGGTGAGAGTGGTCTGCACGCCGACTCAATAAGCCTACCATTTTGGGGACAAGACCGAGTGGGGAGCTGGGAACATAGTCTTACAAGATGGAATTCACTCCTTCCCAACATTAGGGCAAGTAGAGGTGTGTTCCCTTAAGTGGTGTCTCCAGGTCTTGAACAATGGGCCCTACCCTCTCTATGGCACGAGAGGGACTTCTGTTTGTTGGTTGGACCTCAAACAGGTTGTTCATTAGAGGAGCACTGGTACTTAAGGATGAAGAGGTAGTCCAGGGGTAAAACGGTAATTTGACCTAGCTGGGGTACGAACACACGTGAAGGGCTAACTTGCTGTTGATGGTCGATATCCGTGGACACAGAAATATATCTACAGTGAGAAAAATGCAGCTGTGGTTCTATAGTGGAGTGAACCACAGTTAACGAACATTGATTAACTTGGTTAATGAGTTTAGCCAATTAATCTCATATCGTTGGAGCTTCTGGTCTGTAGGTCCATTAGGTCCCACCGGTAGCTCACTAGGGGCGTTGAGGTAAAATTCTAAAGGGGAATGGAACATTCGAAGATGTTCGAGTGTTAAGTTTTAAATATGAATTGGATTCATATTAAAAACTATAGGTTATAATTAATGCACATTTGATGTACATTAAAACTATAGTTTATGAGAGAGAAATATAATTAAGTATATGATATTTAATTATAATATTAATTAATTGATGAATTAATTAATATTTTTTAGTTTTAATTTAATTTAATTAAATTTGATTTAATTACTTTACATTAAAACTATAGGTTATGTGGGAGGTTGACATAAATGTGATTTATGTTTATAATGTTAAGATAAATTGGGATTCTTAATATTATTTAATTAATTATTATTAATTTAATAATTAATTTTTTCTTATCATTTAAAGATAACTGATAAGAATTAATCCTACCCACTAATTGTGCAATACGCACGATGTTGAGTGAGAATAGGAGAAGTTTTTGCTTCTTAACGTAACTGAGTAGTTCAGTTAGTTTTTGATCCCTTTTTGGCCTCTGAGATCTCTCTCACTCTCTCACGCGTCTCGCTCCCTCTCTCAGTAGTTTTTCTCTGTGTTTTTCCTCTCTAGTGAATACAGAGAACAAAACCCCAAAATTCCCAGAATTTTCTTGGTTCCCACAAACCTCTCAACTCCATTCTCTAGGAGGATACTCGTGTAGCACTTTTGGTTGTGTTCGTGGGAAATTTGCAGCAAAGAAAGGCTTCGAAGGCTGCTGGTTTTTACTACAATTCAAAGAGAATTAGACGAAAAGATCAAGAACTTCATCTACGGTAGGTATTTCTTGATCTAGGATCATTAGGATCCAATTTAGATTAGATCTAAATATGTATTAGCATGTTTTATTATTAAAATTCAGTAGTTTTATTTGATTTTACTGCTGTGTTTTAATTTGCCAACGTATGGTAATTTATTCCGAATTTAAAACTGAGTTAAGGTTCTTGATCGTTTCCGCTGCGAAAGGACTTTTATCCCTTCAGGATGAAGAATCAAAGATGAAACAACAGTGGTTATCAATACAAAATTGATGAACGGAGAGAAGATTGGTGCTAATATGAGGAACACGAAAAAGATTTGATAGAGTAAAAGAATTATGAGGAAGGGAAAACTTGCCAAATCCATAATGAGAAATAGAGAGAGACTGACCATTGCCAACCGTGATATTCTCTTCTCCATTGTAAGCCGAGGAAACACTCAGATTCGCAAGGTCATTAGTCAGGTGTGCATTACAACCTGTATCCGTCAGCCAAACACGAGAATCAGTTGGAGAATTATAAGGAGAAGGACCAACCGTAGAAGCTGAAGCAGCCATAGCAGCAAGTTTGGCAGGTGGATGTCGGCCCTGGTATGAGTAATTCATACGGTTGTAGCAATCTAAGGCGTTATGACCATATTTGTGGCAGATCTGACATGTAACCTTACTGGAGAAACGATTGTCATCAAAGGAAGAAGAAGAAAACTGACCAGGCGATGGTGAAGAAGCAGAGTGAGGAGTATTCGAGAATTGATTAGAACTACCCCGACCTCTGCCAGCATTTCAATTTCCATCAGATCTACCACGACCTCGACCATTACTTCTCCAATTACCTCTGCCCTGAAATTCAAGATTCGCGGTCATTGCAAGATGAGAAGTATTGGTCGTTTCGTCAACCTTAATTTGATTTTCAATAGCAGTCTCTTCAGTCTTCATCAAAATATGCAGCTCGTCAAAAGTAAGGCTTTGAGACCGAGTCCGGAGAGAAGTTTTAAAGACATTATACACCGATGGAAGACCATTGACGGTGTAGATTATGAGATCTTCTGAATCGATGATAACAGAGACGGCAGCCAACTTGTTAACAATCTCTTTAACCCAACGAACGTACGTATCAACCGTTTCACCAGATTTCATGGAAACGCTCTGTAACTCGGTCTTGAGGCCAACGATATTAGTGCGAGTAGAGGAAGAGAAGTGTTTCTCAAGCTTGTCCCACACCTCCTTGGAAGTTTGACAACCAATAACATAGGACAGGGCAGTTTGAGTCAATGTAACGTTGATCAGTGTGATAAGAGCCTGATCTCGTTCATACCAAATCTCGAATTCAGGATTAATATGATGTGGAATTTTCCTACCGCAAGCGCACGGGTCAAGTAATAATAAAGTGATTTTGCAATCGAGTGTCGTCCTCTGGATTGGATTTTTAAGTTAGATTAACTACCATGAATATTCTTGCTTAATTTTATTTAGGGATCGAAAAGTAGTGAGTTTTGGAAACAAAGAATATGCAAATTAAAGATGTGAACTTCAATTGAAAGAATACTTAGGGAATTGATTTTGTCAATTTAAGCTAGGATTGATTTTAGGGAATGAATTATAACGTACAATGGTTTTATGAGTCAAAGAACCTTTAATCACAACTACCTCTCCCGAGTATAATTGATTCTCATGCAAATTAACTAACTTGATATCTCTATCTAAGTTCTTTAATATGCAAGGCATTTAGTTCTTTTTGACCAATTCTAAAGTTACTCTAAATTCCGTCACGAGTTTAGAAATTCTACTTTAGTCATGCAATCTTAATTAAGTCTACGCTAAATCCCCTCTCCCGAGCAAGACTCAACACTTAGATCATTCAACTAATGGCCAATTAATTGAAAGCATTAAATTAAGAATGCAAACATAAAACAATTGCACAATTCAACCCATAAATCAATCCATAAACTAAAAAGACTACATCAATCCCTAAGTAACAAGCTTAGCTACTCATACAAGGCGTTACAAGATAAACTAAGCATGAAAAAGCCATTAAAAACTAACTAAAGTAAGAGGGAACAAAGATTAAACACTAGGTGGCCGAGACCGCACGTCCCCGCCACGATCTTCACGAACAAAGTCTTCAATCCCGCTCTCCACCACTTGCTTCAGCTTCAAAAGAGGGTTTTTCTCTCTGTTTTCGGCTCCAAATCTCCCCCAAAAAAAGTCCCCCAAAAAGCCCTAGTCGCAAAATATAAATAGGGAAAATTTTGGTCGTAGCGTCACGACGCTATGTTTTTTTTTTTTTTTTAAGATTGAAAACTCCAAATATAGAATGTCAGCGTCGAAACGCCCAAAGAGCAGCGTCTCGACGCTGGTCTGCGGATGGGCCTATCTTCAATCTTCCAACTTTGATTTTTTTTTTTCATTCTTCGGCTTCCTTTCGCATCCCGAACATCCAATTGGCTCAAAACTATATTTCCTTTAAATACAACACATAAATGCATAATTTTGGCCAATAAATTATAAAAGACTAGCTAAATTAATTAGGGAAAACTAGCTAGCTATGCTCTCTATCATACGCGGAGGTTGTCCTTCAACCCTAACGATCGCTTCAGGAGCCTTGGCGGAACCATCAACATACTTGAAAAGTTTGTGCGATTTCAGAAGAGGAGAAATTTGAAACCGCCAAAGAACATAATTCGTCGAATCGAGTCGAACAGAAACCAGATTACAGATGTTGTTGAGGAGAGAAACTGAGGAATTTGAATTCGAACTCAGATTTGGAATTAGGGCAGATTCGCTCGAATTTTGCGGAACTTCAGGGTTGACTTCAGTAGTCGTCATCGTGCTTCGTGGAAGAAAGTCACGAGAGAGAAAAAAAAATCAAGAAATCTCAGATCTTGACGTGTGGAGAGAATCTGATCTGCTCTGATACCATAAAGATTTCAGAATTAAGAAATGAATCTCCTCAATATTATTGATAATAATGAACTGATATTTATACAAGAGGAGAATTAATATAAATAACTGAAAAGTAACTAATGATAAACAGAAGAAACTAAGGCCATAGACTATACAACCATATAGAATGCTAATAAATTATTGAATTATAGATATAGAGTAGGTTACTAAATTTTGATAATTTAGGTCTTGTGACCAAGTTTTTGTGGTTTTAAAATTCTACTTGTTTTTATCATTATTTATTTACAAATATTTCCATATTTCTTTAAAGAAACATTTGGATTTTTAGCAAAATTCCAAATTCTAAAAACAAGTTTATAAACTATTTTTTTTCCTTTTTAGTTTTTAAGACTTGGCTTGGATTTCAAAAATGTTTGTAAGAAATTGATGACAAAATACATTCAGAGGGAGGAGAGTGTTTATAAATTCAAGTTTAAAAAACAAAATGGTTATTGTTGTAACATTTTAATATTTAATTGTAATTTAAATATGAGTTTCAATCTTGGATGTTAAATTTTGGATGTTTTCTTCTTTGAAAGAGTGAAAAACATATTTGACACAAGAAAATGTTTTAATTTGAATTTTGGTTACTTTTTCTTTGTATTAAATTCCTAGATCTAAAATTCTTATATAAATACCTATCTTATCACACTCTCTAAAATACAACAATTTCGATCTTCTCTTCTTTCTACTTTCTCATATTTCTCTCATTTGCTCTTTTAAGAGCAATTGACCAAAAGAGGGGTGTTCTTTGTTGTGGAGCTTTGAGCTCAACCTCTTAGTGTAGAGTGGTTTGATCTACACAATGTTTTAGTTGGATTGTTGTATCCTGGAGAGGACATGTTAGAGAAGACATGTTGCACCGGTGGTTGATAAAGAATTATACACCGCAGAGGACTTGAATCTCCTTAAAGAGAGCGAGATATACCCGCGCTTCAACTTAATTATTTATGTGTTTGTTTCTCAATATTTTCTTCGTTCTCCTCTGTTATTTGTAATTTCCCCCAACAATTTTAAGGAGATTCAAGGCATGGAGTCTACTATTGAGAAAACCAAATGAGAATGTTGGAGATCTCAATAAGCCCCACTACAACAAATATGACATACGATAGCATTAAGAAAACGCTATCGTAGGCTTTCTATAGTGTTTTTTGAAACGCTGTCGTAGCCGATGTTATTGAAAGTCTCCAACTTTTCATAGCATTTTTTCAACGTTATGAAAAATGCTATAAAAGTTCACTTTCCGTTGCGTAATTTTAATGTTATGGAAACTTTTCATAGCGTTAGAAAAAACACTATGATTGCCCTTTAATAGCGTTTTTAATAGCAGTTAAAAAACGCTATAAAAACATATGATAGTGTTTGTTATAGCAATTAAAAATAGGCTTTTAGGCATGTTGTCATAGCCAATGTTATTGAAAGTACATGACTTTTCATAGCGTTTTTTCCATGCTATAGAAAAAGCTATAAAAGTTCCATTTTCAATTGCATAAATTTGATATTATAAAAACTTTTTGGGCCCGTTTGGTTTAAGGTTTTATAGATGTCTGGGAATACATGATGCCTGGGAATAAGATTGCTGGGAATCAAAGATAACTGTGTTTGGTTGTGCATGGGAATGTCATCAGGATTTTATGAGAACAAATTATGTCTTTATTTATTTTTTAGAATTAATCAGGTAAACTTTATGTAATTTTAATAAATTAATCAATAAAATAATAAAAATTAATGAAATAATAATCATGAAATGATTTTAATGGGATAAACTATGTTAATTTAACAAACTAAAATTATTTAATTATTTTTTAATAAATATCTTTAACTACAATAATTTAATATATTGTATCCATAAAAATTAATTAGATAAATATTTAATAATAATATGATTATTTATTTATTATAAGGAAATTTTAAAAAGTAATTAATTGATTATAAATAATCGATAAGTAATTAATTATAATTATTGAAAAATGAATTTTTATACTAAATTCATTTAAATGATTTTAATTCAATAATTAAATATATTTTGGATAATATTGACTAATTAATTATAATTTTAGTAAATATGTAATTACATCCCTTTAATAAACTTGGACTAAGTATTTGTTTAAAAGTCCTAGAAAAAAGTATTTGTTTTAAAAAAAATGAAATTCTTGACAAATTATTATTTAATCTAATTAAATAATTTATTATATTATTTTTAATTTAGTATCCATTAGTTAATTAATGAACTATATTCAAAATAAAATTGCATATAAAAATAAAAAAGAAGAGATGGGAAAAGAGAAAACTCATGTTTTTGCAAGGGCATAGAAAACCCTTGCTTATGGGCATAAATGATGCCTGAGAATGTGTTATTTCCTGGGCCCACCACAGAAATCTTGAAACAAACAAGGGTATTAGAAACCCTTCCCATTCCCATCTCCAAAAACCTTGTACCAAACGGGCCCTTTATAGCTTTAACAAAAAAAATGTTATGATTTATCTTTAATAACATTTTTTATAATAGTGAAAAATGTTATAGAAAACAGATTATAACATTCTTAACTTGGTTGTGATAGCCAATGACATGGATAATGATGAACTTCAAGTAGTATGTAACAACTTCTATAGCATTTTTATATAAGTAACAAATTGTTTCAAATGTTATTCTAAAATTAACTCAATCATATAAACATTTAATGTATTTAAGTGCATTTACATCAAAATAAAATTTCAAGAATATAGACATATAATACCAAGATTTCATAATCTCAAAGTGTTCTACTAATACATGTACAATCCATAATCCAAAAGTAAAAATGAAAATAAAAATAAGTACACAATTCCAAAACATAATCATCTCGAATAACACGTACACATGATTTAAAAGATTGAGATGAACATATCCTCCTATATATATGTCGGTGTGTCATCAAAGATCAATAAACTAAATCAATAATTAATTCAAAGAAACTAAATCAAACTTCAAAGTAATTTTTTTTTATATATTGACAATACTTTGAGACAAGTAATTGAATTTCATCCCACAAATTTATACAAGGAAAAATAAGGAGTATAACTAGCAACAAGAACACACACTTAAACAATAAATATCAAAGTAGAGAAAAATAAAATAAGGGATAAGATCTAATCACCATTTGAATCAAGACCACGCATTGTGGGTTCTTGGAGTATTCCCCTTAGAAGTGGGGCTTTTTCAGCATATTGCTGGGTAGAGGAAGTGAAGCATTCGTCTGGTAATCTAGGAAGAAAGCAATGGATCTGGATGATTTGTTAGATGAATGGAGGCATTTTACGTTGAGGGAAAGAGAGAAAGAAAAGTTCTTTTCGGTGGAACCAGATGTGTTAAAGAATATCAAGGGAAGATTCAGCCACTGTTTGATAGAGAAACTACTGACTAGTAGAATCATATCCAAAGTTGCAATTAAGAATGCGCTGATTGGAGCATGGAGAACAAGAGAAGATTTTGAGGTCGAACTGATTGGGAAGAACTTGTTCCTCTTCAAATTTGAATGTAATTTCGATAAAGACTGGATCTTTAAGAATGGACCATGGTTCTTTGATAAGTATCTTCTAATTCTTGAACAACCAGTGGTCAATGTTAGTGTTTCTGAAATTGAATTCAAGAAGGCAGCGTTTTGGCTAAGACTTTTCAACCTTCCCCTGGAATTCAGGAACAAACAAATGGCAAAGAAGCTAGGGGATAGTTTGGGAGAGTTTTTGGAGGTAGAATGTGATAAAGAAGAATTTTGTGGTGGGAATAGTATGAGGATAAAAGTTAGATTGGATATTACTGAACCTTTATGTAGGGGTTTTATGTTGAAGTCGGAGGAGATTAGGGAAGGATGTTGGATAGCAATAAGATATGAGCGGTTACCTGAGTTTTGTTTCAAATGTGGGAGGATCGGTCACGTTCTTAAAGACTGTCATGATAAACAGAAAGAGGAAATGCAAGAACAGAGCAGATTGGAATTTGGAATGTGGCTTCGGTTTCAAGGTTTTGGCAATCAATCTAAGAAACCTAATAGTAATCAAAACAATGATAATGATCAACCAAAGCAAAAGGACTTAGATGCTGAAGGTGTAGAAGAAAATCAGAATATGGCTATGGAGGGTCAGGAGGTGAACCTTGCAGGGGACTCGTCTCCAGTATATGAGGAACCTGGAATCTGCATTAGAGAAGAAAATATTTTGGAGAAGCTGAAAGATCAAGGAATGTTTGAAGAAGGGAATAAGGAAATAGACCTTAATAGATCTGGCTTTCTAAACGAATTGGCAAAAGAATCTGACAAAATTAGTTCAGATTCTTTTACAAATTCGGCAGGGGTGGAAATTTCATCAAAAAAGAAATCCAGTTGGAAAAGGAGAGCAAGGTTAGGTTCCAAGGAGCTTCAAAATAAAAGTGATATCAGTTTACAGAAGAGGAAGAGAGGTGAGGAATCTGAGGAAGGTAGCAAGAAGTCGAAAACAGGGGATGGTGAGGATATGGTTACATGGATGACTCTGAAAATTTGGCAGTGGCTGCAAGGCAGCCCTGCCTAAGGCAATGAAAATTCTTTGTTGGAATGCTCGGGGTTTGGGGAACCCGAGAGCATTCCGAGCAATTCAAAATCTTGTGAATACAAGATCTCCCCAGGTCCTTTTTATATCAGAAACAAAATGTGGAGAAGAAATTACAGGGAAAATAAAAAACATTTGCAAATTTGAAGGTTACCTTACGGTTAGCAGTATGGGTGCTAAAGGGGGTTTATGTATCTTTTGGAAGGATAAGAATCTTCTTAAAGTTAAATCCTATTCCCAAAACCATATTGACACTGAGATCTTATTGAAAGATAAGTTGTGGAGATTTACTGGTTTTTACGGATTCCCAGAATCAAGTCAAAAAATCAAATCTTGGGATCTCATAAGAAAGTTGCAGGGAAGTAGTGATCTCCCATGGCTTTTAGGAGGGGATTTTAATGAGATTTTGTGGGATTCTGAAAAATTTGGAGGTCCTCAAAGAGATAGGAAGTTTCTTGAGAATTTCAGACAAGTCCTAGATGAATGCGAGTTGAAGGATATTAAACCGAGTGGGGATTTGTATACATGGTATGGTGCCAGGAGAGGTTTCCATATTTGGGAGAGGCTTGATAGATTTATTTGTAATCCTTCTCTGGAAAATATTTTCAACTTGACAGATATTAAGAATTTGGACTGGCTATTCTCGGATCACAAGCCAATCGAAATAAATATTGAGTTTGGAAGACCAACAAAGAAGAGGAAAAGCTATCATTTCAAGTTTGAGGAGTACTGGACCAAGCACGACAAATGTAAAGAATTGATTTCTGAAAATGGTACATGGTCAGGTAATATCCCTCCACTTTACTCTTTGTCAAGTAATTTGGTTTCTTGTTCTAAAGCATTAGGAAAATGGGGTAGGGATCTTAATAATCAAAGGAAAAACAGAATTGAAGAATGTAAGAAATCTTTAAAGGAAGCTTATATTAACAAAATGTGTATTAATTTTGACCATATCCATGCTTTAGAATTTGAACTAGATAAATTACTTGAGGAAGAAGAGATATATTGGAAACAAAGGTCTCGAGAAGATTGGCTTAGGTGGGGCGATAGAAATTCCAAGTGGTTCCATAAGAAGGCTTCTATTCGTAGGAAAACTAATGAAATAAATGGGATAACTAATGAGATTGGGAGTTGGGTTGAGAATCCAGAGGAGATTGGGATTACTTTTATGAATTATTTTCAGAGCCTTTTTACCTCATCTCAGCCTAGGGAAGAAATAATAAATTTGGCAGTAGATGGCATTCAGACTAAAGTTACTAGGGCTATGAATAATAAACTCTTAAGTCCTTTCACTAAATTTGAAATTGAAAAGGCAGTTAGTCAACTTTTTCCCACTAAAGCCCCTGGCCCCGATGGTTTTCCAGCATTATTTTATCAGAAATATTGGAATATTGTAGGTCACAAAACAATAGAAGAGTGTCTGGATATTCTAAATAACAGAAAATGTATCAGAGAGTGGAATCACACAAATATTGTCCTTATTCCTAAATCTCCTAATCCAAAAGAAGTAGGTGATTTTAGGCCTATTAGTTTATGCAATGTAAACTATAAAATAGTTACTAAGACTATTGCTAATAGGCTAAAATGGTTCCTCAATGATATAATTTCAGATTCTCAATCAGCTTTTATACAAAATAGATTAATTTCTGATAATATAATGATAGGTCATGAATGCCTAAATGCAATTAAAAACCATAAGAATATTAAAATGAATATGGCAGCCCTAAAAATTGATTTAAGCAAGGCTTATGATAGGGTTGAATGACATTTTCTAGAAGAAGTTATGCTTAGATTGGGGTTTGACAAAGATTGGGTTGAGTTAATTCTAAGATGTATTTCCACTGCTTCCTTCTCAGTTAATATTAATGGGGATTATATAGGGAACTTTGGTTCTAGTAGGGGTCTTCGCCAAGGGGACCCTCTTTCCCCTTATCTTTTTCTGTTTGTAGCAGAGGGTCTCTCAAACTTAATAACAAAAGCTAATTCAGAAGGGCAGCTTACGGGTTTAAGGATTTCTAACAGTCCTCCAATCTCTCATTTACTATTCGCAGACGATAGTTTAATATTTTGCAAGGCGGATGAAAGAGAATTAGTGGTTTTAAAAGATCTTCTTAACCTTTATGAGAATGCTTCGGGTGAATGCATAAATTTTTCGAAATCAGCAATTCTTTTTTCTCAAAAGGTTAATCAAGACAGAAGGGTTTTTCTTAGCAGCATACTAGGAGTTAAAAAGGTTGATAGTTTTGGTAAATATTTAGGAATTCCTTCGGTGTTCACTAGGAGTAAAGCCAAAGACTTTAGTTATGTGCTAGATAAAGTTTGGAAGTCAGTACAAGGCTGGAAGAGCTCTTTTTTCTCTTTGGCAGGTAAGGAAGTCCTAATAAAGAGTGTAGGCCAAGCTATTCCTATGTATGTTATGAGTACTTTTAGATTCCCAAAGAGTCTGTGCAATGAGATCACCAAAAGTTTCTCTAGATTTTGGTGGGGTTCGAATAATACAAAAAGGAAAATGCATTGGATTAAATGGGAGAAACTATGTTATCCTAAATGCCTAGGTGGTTTAAATTTCAGGGATATTGAGGGTTTTAACCAAGCATTAATAGCCAAACAAATTTGGAGATTATTGATTAATCCTGGTTCTCTTGTTGCAAGGTTTTTGAAAGGCATCTATTTTAATAATTCTGATATTCTATCTGCTGTAGAAGGTAAAAATTCCTCTTATTTGTGGAAGAGTTTAATGTGGGGGCGTGATCTTTTATTAAAAGGCATAAGATATAGGGTAGGTAATGGTAACTCTATATCAATGTTTCATGATCCATGGATTCCAAGAGAAATTAATTTTAAGCCTATATGTGTAAATATGGAAGTTGTTGATGACAAGGTATCTAACTACATTTCTCCTTCAGGCCAGTGGGATTTAGATAAACTAAGCCACTCTGTGTTAGATATGGATTTGGAAGTTATTAAGAGAATCCCTGTTAATGTTAATTTGGAAGATAAAATAATATGACACTACGATAAAACTGGGAAATATACAGTGAAGAGTGGCTATAAACTGTTCTTGAATAATAAAATAAATGAAGCTTCCTCGAGTTCTTATCCTATGGAGAGTGTGTGGAAGAATCTATGGAAATTAAAAATCCCTAACAAAATAAAAATCTTCTGTTGGAAAGCTCTTAATGAGATAATCCCTACTAATTTTAATTTGTCTAAAAGAGGTGTTCCATCTTCTCCTATTTGTCCTATGTGTTTAAAGGAAGTCGAATCTACTGACCATTGTCTGTTTGGGTGTTTTCGAGCTAGGGAAATCTGGACTCAAACTTTCAATAATGTGATGCTGCAGATTGATTTCAACAATAGCATTACAGATAGATGGTTGAGCCTAAATTCGTCAAAATCAATGGAAGAAATGGAGCTAATCGCAGTCACATGTTGGGCAATTTGGCTGGATAGAAATAAGAAGACACATAATGAAGAATTTCCTCCAGTTATGATCAGAAGCAAGTGGATAGGGGAATATATCAAAACATTCAAAAGAATGAACCTGATTCAAGCTTCCCCTAATTCGTTCAGAGATCTATCAGCAAGGGTGTCTTCGCAGGCGAAATGGTCTCCTCCGCCTTCAGGTTGCTGGAAGCTAAATTCAGACGCAACTTGGGGCCAAAATCCTCCTTCGACTGGTTTGGGAGCTATTATCAGAGATTCGGACGGTAAATCGGTGGGAGCTTCATCTAGATCGTTAAATGTCGATTTCCAGGCGCCGATTGCAGAGTTGATGGCGATCTTACAGGGGATTAGACTGGCTGTATCGATGGATTGTAGAAAACTCCTGGTAGAATCGGATTGCATGGAAGCCATAAATCTTATTTCTAAGAAAACTAGTTGTTGGGGAGAAGTCGAAGTGGTTTTGGAAGATATTTGGGTCTCCTTATTTTCGTTTTCAGAGATTAGATTTTCCCATATTCCAAGGGATTGTAATCGTGTTGCAGATAAAATAGCTAAAGTGGCTAGAGCTAGTAGTGTGAACATGACTTGGGTGTGTAACTTCCCAAGATGGATGTATGATCTGGTCAATCTTGACCTCGTTTCTTCTGCCCCTGTGGCGTTATAAAAAGTATTATTTTTCAAAAAAAAAAAAAAAAAGATCTAATCACCATTTTCTTGAACCAAATGATTTCTTTCCTTGTTTGTTTGGGTTCATCAGGCTCCATAGCCTTTTCTTGA

mRNA sequence

ATGGGGACTGAAGATGTGTTAAAGAATATCAAGGGAAGATTCAGCCACTGTTTGATAGAGAAACTACTGACTAGTAGAATCATATCCAAAGTTGCAATTAAGAATGCGCTGATTGGAGCATGGAGAACAAGAGAAGATTTTGAGGTCGAACTGATTGGGAAGAACTTGTTCCTCTTCAAATTTGAATGTAATTTCGATAAAGACTGGATCTTTAAGAATGGACCATGGTTCTTTGATAAGTATCTTCTAATTCTTGAACAACCAGTGGTCAATGTTAGTGTTTCTGAAATTGAATTCAAGAAGGCAGCGTTTTGGCTAAGACTTTTCAACCTTCCCCTGGAATTCAGGAACAAACAAATGGCAAAGAAGCTAGGGGATAGTTTGGGAGAGTTTTTGGAGGTAGAATGTGATAAAGAAGAATTTTGTGGTGGGAATAGTATGAGGATAAAAGTTAGATTGGATATTACTGAACCTTTATGTAGGGGTTTTATGTTGAAGTCGGAGGAGATTAGGGAAGGATGTTGGATAGCAATAAGATATGAGCGGTTACCTGAGTTTTGTTTCAAATGTGGGAGGATCGGTCACGTTCTTAAAGACTGTCATGATAAACAGAAAGAGGAAATGCAAGAACAGAGCAGATTGGAATTTGGAATGTGGCTTCGGTTTCAAGGTTTTGGCAATCAATCTAAGAAACCTAATAGTAATCAAAACAATGATAATGATCAACCAAAGCAAAAGGACTTAGATGCTGAAGGTGTAGAAGAAAATCAGAATATGGCTATGGAGGGTCAGGAGGTGAACCTTGCAGGGGACTCGTCTCCAGTATATGAGGAACCTGGAATCTGCATTAGAGAAGAAAATATTTTGGAGAAGCTGAAAGATCAAGGAATGTTTGAAGAAGGGAATAAGGAAATAGACCTTAATAGATCTGGCTTTCTAAACGAATTGGCAAAAGAATCTGACAAAATTAGTTCAGATTCTTTTACAAATTCGGCAGGGGTGGAAATTTCATCAAAAAAGAAATCCAGTTGGAAAAGGAGAGCAAGGTTAGGTTCCAAGGAGCTTCAAAATAAAAGTGATATCAGTTTACAGAAGAGGAAGAGAGGTGAGGAATCTGAGGAAGGCTCCATAGCCTTTTCTTGA

Coding sequence (CDS)

ATGGGGACTGAAGATGTGTTAAAGAATATCAAGGGAAGATTCAGCCACTGTTTGATAGAGAAACTACTGACTAGTAGAATCATATCCAAAGTTGCAATTAAGAATGCGCTGATTGGAGCATGGAGAACAAGAGAAGATTTTGAGGTCGAACTGATTGGGAAGAACTTGTTCCTCTTCAAATTTGAATGTAATTTCGATAAAGACTGGATCTTTAAGAATGGACCATGGTTCTTTGATAAGTATCTTCTAATTCTTGAACAACCAGTGGTCAATGTTAGTGTTTCTGAAATTGAATTCAAGAAGGCAGCGTTTTGGCTAAGACTTTTCAACCTTCCCCTGGAATTCAGGAACAAACAAATGGCAAAGAAGCTAGGGGATAGTTTGGGAGAGTTTTTGGAGGTAGAATGTGATAAAGAAGAATTTTGTGGTGGGAATAGTATGAGGATAAAAGTTAGATTGGATATTACTGAACCTTTATGTAGGGGTTTTATGTTGAAGTCGGAGGAGATTAGGGAAGGATGTTGGATAGCAATAAGATATGAGCGGTTACCTGAGTTTTGTTTCAAATGTGGGAGGATCGGTCACGTTCTTAAAGACTGTCATGATAAACAGAAAGAGGAAATGCAAGAACAGAGCAGATTGGAATTTGGAATGTGGCTTCGGTTTCAAGGTTTTGGCAATCAATCTAAGAAACCTAATAGTAATCAAAACAATGATAATGATCAACCAAAGCAAAAGGACTTAGATGCTGAAGGTGTAGAAGAAAATCAGAATATGGCTATGGAGGGTCAGGAGGTGAACCTTGCAGGGGACTCGTCTCCAGTATATGAGGAACCTGGAATCTGCATTAGAGAAGAAAATATTTTGGAGAAGCTGAAAGATCAAGGAATGTTTGAAGAAGGGAATAAGGAAATAGACCTTAATAGATCTGGCTTTCTAAACGAATTGGCAAAAGAATCTGACAAAATTAGTTCAGATTCTTTTACAAATTCGGCAGGGGTGGAAATTTCATCAAAAAAGAAATCCAGTTGGAAAAGGAGAGCAAGGTTAGGTTCCAAGGAGCTTCAAAATAAAAGTGATATCAGTTTACAGAAGAGGAAGAGAGGTGAGGAATCTGAGGAAGGCTCCATAGCCTTTTCTTGA

Protein sequence

MGTEDVLKNIKGRFSHCLIEKLLTSRIISKVAIKNALIGAWRTREDFEVELIGKNLFLFKFECNFDKDWIFKNGPWFFDKYLLILEQPVVNVSVSEIEFKKAAFWLRLFNLPLEFRNKQMAKKLGDSLGEFLEVECDKEEFCGGNSMRIKVRLDITEPLCRGFMLKSEEIREGCWIAIRYERLPEFCFKCGRIGHVLKDCHDKQKEEMQEQSRLEFGMWLRFQGFGNQSKKPNSNQNNDNDQPKQKDLDAEGVEENQNMAMEGQEVNLAGDSSPVYEEPGICIREENILEKLKDQGMFEEGNKEIDLNRSGFLNELAKESDKISSDSFTNSAGVEISSKKKSSWKRRARLGSKELQNKSDISLQKRKRGEESEEGSIAFS

Homology

[Close]

BLAST of Lcy01g010640 vs. ExPASy TrEMBL
Match: A0A6J1DU55 (uncharacterized protein LOC111023135 OS=Momordica charantia OX=3673 GN=LOC111023135 PE=4 SV=1)

HSP 1 Score: 206.8 bits (525), Expect = 1.6e-49
Identity = 108/263 (41.06%), Postives = 158/263 (60.08%), Query Frame = 0


Query: 5   DVLKNIKGRFSHCLIEKLLTSRIISKVAIKNALIGAWRTREDFEVELIGKNLFLFKFECN 64
           D +K  +   ++ L+ KLL  RIIS   +   L+ AW+      VE IGKNLFLF F   
Sbjct: 29  DAVKMAEQGLAYSLVGKLLAKRIISADVLSRVLLLAWKVEHQLTVESIGKNLFLFHFCRE 88

Query: 65  FDKDWIFKNGPWFFDKYLLILEQPVVNVSVSEIEFKKAAFWLRLFNLPLEFRNKQMAKKL 124
            D + + K GPWFFDK L++L++P  + ++SE+EF + AFW+ LF+LP+ + NK MA +L
Sbjct: 89  CDMNRVMKTGPWFFDKALIVLQKPCSSKNISELEFNRVAFWIHLFDLPMSWLNKTMAIRL 148

Query: 125 GDSLGEFLEVECDKEEFCGGNSMRIKVRLDITEPLCRGFMLKSEEIREGCWIAIRYERLP 184
           G+++G F++V+C+++ F  G S+RI+V +DIT+PL RG  +  +    GCWI I+YERLP
Sbjct: 149 GNAIGNFVDVDCNEKGFSWGASLRIRVLIDITKPLRRGIKINIDGPMGGCWIPIQYERLP 208

Query: 185 EFCFKCGRIGHVLKDCHDKQKEEMQEQSRL--EFGMWLRFQGF---GNQSKKPNSNQNND 244
           +FC+ CG IGH   DC D +    Q+ SR   E+G WLRF G      + +K  S    D
Sbjct: 209 DFCYFCGVIGHSSHDC-DARYLAAQDDSRATSEYGPWLRFVGSKAGAQKGRKGKSPARED 268

Query: 245 NDQPKQKDLDAEGVEENQNMAME 263
           +      +    GVEE +    E
Sbjct: 269 SCGSSSMNSKERGVEETKQQLSE 290

[Close]

BLAST of Lcy01g010640 vs. ExPASy TrEMBL
Match: A0A6J1BSZ1 (uncharacterized protein LOC111005481 OS=Momordica charantia OX=3673 GN=LOC111005481 PE=4 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 2.8e-43
Identity = 90/213 (42.25%), Postives = 135/213 (63.38%), Query Frame = 0


Query: 18  LIEKLLTSRIISKVAIKNALIGAWRTR-EDFEVELIGKNLFLFKFECNFDKDWIFKNGPW 77
           LI KLL+ R IS   +KN L  AW+   + F V++IG N+FLF F  + D++ I + GPW
Sbjct: 42  LICKLLSKRSISCTVLKNTLKIAWKLDCKAFSVDIIGFNIFLFNFNRSSDRNRILRMGPW 101

Query: 78  FFDKYLLILEQPVVNVSVSEIEFKKAAFWLRLFNLPLEFRNKQMAKKLGDSLGEFLEVEC 137
            FD+ L+I++ PV      +++F+  + W+  F+L L   NK MA +LG+++G F +VE 
Sbjct: 102 TFDRALIIIDNPVSLTKPLDMDFRNVSLWVHFFDLSLACMNKTMATRLGNAIGLFEDVES 161

Query: 138 DKEEFCGGNSMRIKVRLDITEPLCRGFMLKSEEIREGCWIAIRYERLPEFCFKCGRIGHV 197
           +   FC G+ +R++VR D+ +PL RG  L  +    GCWI I+YERLP+F + CGR+ H+
Sbjct: 162 NANNFCWGSCLRVRVRFDVMKPLHRGIKLNLDGPMGGCWIPIQYERLPDFRYHCGRLDHI 221

Query: 198 LKDCHDKQKEEMQEQSRLEFGMWLRFQGFGNQS 230
           LKDC D   + + +   L++G WLRFQG  N S
Sbjct: 222 LKDCSDCCVDSVSK--NLQYGPWLRFQGHKNSS 252

[Close]

BLAST of Lcy01g010640 vs. ExPASy TrEMBL
Match: A0A5C7GPP6 (CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_026075 PE=4 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 3.3e-39
Identity = 81/238 (34.03%), Postives = 141/238 (59.24%), Query Frame = 0


Query: 4   EDVLKNIKGRFSHCLIEKLLTSRIISKVAIKNALIGAWRTREDFEVELIGKNLFLFKFEC 63
           E+V +      SHCLI K+L+ + +++ A  N +   W      E+E+I  N+F+F F  
Sbjct: 26  EEVRREGIADVSHCLIGKVLSGKKVNREAFINMINQLWSPFGQVEIEVIADNIFMFFFTK 85

Query: 64  NFDKDWIFKNGPWFFDKYLLILEQPVVNVSVSEIEFKKAAFWLRLFNLPLEFRNKQMAKK 123
           + D+D +++ GPW FD +L++LE+P+    +SE+ F K   W+++ NLPL + N++ A+ 
Sbjct: 86  SEDRDAVWRRGPWHFDNHLIVLEKPIGAGEISELGFDKVDMWVQIHNLPLMYMNRRAARS 145

Query: 124 LGDSLGEFLEVECDKEEFCGGNSMRIKVRLDITEPLCRGFMLKSEEIREGCWIAIRYERL 183
           L + +G+ +E+  D +E C G  +R+KVR+D+ +PL R   L  ++        + YERL
Sbjct: 146 LAEEIGQVIEIPADAKE-CRGKFLRVKVRIDVNKPLKRFIKLAVDDTERVVVAPLIYERL 205

Query: 184 PEFCFKCGRIGHVLKDC-HDKQKEEMQEQSRLEFGMWLRFQGFGNQSKKPNSNQNNDN 241
           P+FC+ CG++GHVL++C +D+ + +  E    +FG WLR  G     +KP  +    +
Sbjct: 206 PKFCYACGKLGHVLRECPNDEARIDALEGVSTQFGAWLRVPGPDVGKQKPQKSMGQQS 262

[Close]

BLAST of Lcy01g010640 vs. ExPASy TrEMBL
Match: A0A2Z6LV25 (Uncharacterized protein (Fragment) OS=Trifolium subterraneum OX=3900 GN=TSUD_329120 PE=4 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 5.5e-39
Identity = 89/223 (39.91%), Postives = 133/223 (59.64%), Query Frame = 0


Query: 4   EDVLKNIKGRFSHCLIEKLLTSRIISKVAIKNALIGAWRTREDFEVELIGKNLFLFKFEC 63
           E+ + N    FS  L+ K+ T    +  A K  +  AWR+R   E++ + KNLFLFKF  
Sbjct: 21  EEEVCNDDESFSRTLVGKIWTESPYNIRAFKQTMTQAWRSRNPIEIQDLNKNLFLFKFAT 80

Query: 64  NFDKDWIFKNGPWFFDKYLLILEQPVVNVSVSEIEFKKAAFWLRLFNLPLEFRNKQMAKK 123
             + D + KNGPW FD+ LLIL +   N   SE+     +FW+R+++LPL+ R++ +AKK
Sbjct: 81  RREADLVCKNGPWSFDRNLLILNRISGNEQPSELAMDSVSFWVRVYDLPLKLRSEGIAKK 140

Query: 124 LGDSLGEFLEVECDKEEFCGGNSMRIKVRLDITEPLCRGFMLKSEEIREGCWIAIRYERL 183
           LG+++G F E++  KE    G  +R++V +D+ +PL RG  L  +   +  W+  +YERL
Sbjct: 141 LGNTVGTFEEMDM-KESNRMGKFLRMRVYVDLKKPLKRGSKLNFQ--GKEIWVDYKYERL 200

Query: 184 PEFCFKCGRIGHVLKDCHDKQKEEMQEQSRLE-----FGMWLR 222
           P FCF CGRIGH ++DC D +  +  + S LE     FG WLR
Sbjct: 201 PNFCFACGRIGHQMRDCEDIEDHDEVQYSELEEKQQAFGPWLR 240

[Close]

BLAST of Lcy01g010640 vs. ExPASy TrEMBL
Match: A0A5C7HBM7 (CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_019557 PE=4 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 7.2e-39
Identity = 79/222 (35.59%), Postives = 136/222 (61.26%), Query Frame = 0


Query: 1   MGTEDVLKNIKGRFSHCLIEKLLTSRIISKVAIKNALIGAWRTREDFEVELIGKNLFLFK 60
           +G EDV        +HCL+ K+L+ R +++ A +  +   W    + ++E++ +N+FLF 
Sbjct: 32  VGEEDV--------NHCLVGKILSGRRVNREAFRMVIESLWSPFGNVDIEMVSENVFLFF 91

Query: 61  FECNFDKDWIFKNGPWFFDKYLLILEQPVVNVSVSEIEFKKAAFWLRLFNLPLEFRNKQM 120
           F    D++ ++  GPW FDK LL+LE+P     +S+++F KA FW+++ ++P+   N++ 
Sbjct: 92  FNKPEDRNKVWDRGPWHFDKCLLVLEKPEGTGEISKLKFNKADFWIQIHDIPIMCMNRRT 151

Query: 121 AKKLGDSLGEFLEVECDKEEFCGGNSMRIKVRLDITEPLCRGFMLKSEEIREGCWIAIRY 180
           AK L + +GE +E+  D  + C G  +R+KVR+DI++PL R   L  +       + ++Y
Sbjct: 152 AKWLAEQIGEVIEIPTDSRD-CWGKFLRVKVRIDISKPLKRWLRLGLDRSGNIVVVGLKY 211

Query: 181 ERLPEFCFKCGRIGHVLKDCHDKQ-KEEMQEQSRLEFGMWLR 222
           ERLPEFC+ CG +GH + +C D + K+E  E + L FG W+R
Sbjct: 212 ERLPEFCYACGWLGHGISECPDTEAKKEAMEGATLRFGPWMR 244

[Close]

BLAST of Lcy01g010640 vs. NCBI nr
Match: XP_022156185.1 (uncharacterized protein LOC111023135 [Momordica charantia] >XP_022156186.1 uncharacterized protein LOC111023135 [Momordica charantia])

HSP 1 Score: 206.8 bits (525), Expect = 3.2e-49
Identity = 108/263 (41.06%), Postives = 158/263 (60.08%), Query Frame = 0


Query: 5   DVLKNIKGRFSHCLIEKLLTSRIISKVAIKNALIGAWRTREDFEVELIGKNLFLFKFECN 64
           D +K  +   ++ L+ KLL  RIIS   +   L+ AW+      VE IGKNLFLF F   
Sbjct: 29  DAVKMAEQGLAYSLVGKLLAKRIISADVLSRVLLLAWKVEHQLTVESIGKNLFLFHFCRE 88

Query: 65  FDKDWIFKNGPWFFDKYLLILEQPVVNVSVSEIEFKKAAFWLRLFNLPLEFRNKQMAKKL 124
            D + + K GPWFFDK L++L++P  + ++SE+EF + AFW+ LF+LP+ + NK MA +L
Sbjct: 89  CDMNRVMKTGPWFFDKALIVLQKPCSSKNISELEFNRVAFWIHLFDLPMSWLNKTMAIRL 148

Query: 125 GDSLGEFLEVECDKEEFCGGNSMRIKVRLDITEPLCRGFMLKSEEIREGCWIAIRYERLP 184
           G+++G F++V+C+++ F  G S+RI+V +DIT+PL RG  +  +    GCWI I+YERLP
Sbjct: 149 GNAIGNFVDVDCNEKGFSWGASLRIRVLIDITKPLRRGIKINIDGPMGGCWIPIQYERLP 208

Query: 185 EFCFKCGRIGHVLKDCHDKQKEEMQEQSRL--EFGMWLRFQGF---GNQSKKPNSNQNND 244
           +FC+ CG IGH   DC D +    Q+ SR   E+G WLRF G      + +K  S    D
Sbjct: 209 DFCYFCGVIGHSSHDC-DARYLAAQDDSRATSEYGPWLRFVGSKAGAQKGRKGKSPARED 268

Query: 245 NDQPKQKDLDAEGVEENQNMAME 263
           +      +    GVEE +    E
Sbjct: 269 SCGSSSMNSKERGVEETKQQLSE 290

[Close]

BLAST of Lcy01g010640 vs. NCBI nr
Match: XP_022132681.1 (uncharacterized protein LOC111005481 [Momordica charantia])

HSP 1 Score: 186.0 bits (471), Expect = 5.9e-43
Identity = 90/213 (42.25%), Postives = 135/213 (63.38%), Query Frame = 0


Query: 18  LIEKLLTSRIISKVAIKNALIGAWRTR-EDFEVELIGKNLFLFKFECNFDKDWIFKNGPW 77
           LI KLL+ R IS   +KN L  AW+   + F V++IG N+FLF F  + D++ I + GPW
Sbjct: 42  LICKLLSKRSISCTVLKNTLKIAWKLDCKAFSVDIIGFNIFLFNFNRSSDRNRILRMGPW 101

Query: 78  FFDKYLLILEQPVVNVSVSEIEFKKAAFWLRLFNLPLEFRNKQMAKKLGDSLGEFLEVEC 137
            FD+ L+I++ PV      +++F+  + W+  F+L L   NK MA +LG+++G F +VE 
Sbjct: 102 TFDRALIIIDNPVSLTKPLDMDFRNVSLWVHFFDLSLACMNKTMATRLGNAIGLFEDVES 161

Query: 138 DKEEFCGGNSMRIKVRLDITEPLCRGFMLKSEEIREGCWIAIRYERLPEFCFKCGRIGHV 197
           +   FC G+ +R++VR D+ +PL RG  L  +    GCWI I+YERLP+F + CGR+ H+
Sbjct: 162 NANNFCWGSCLRVRVRFDVMKPLHRGIKLNLDGPMGGCWIPIQYERLPDFRYHCGRLDHI 221

Query: 198 LKDCHDKQKEEMQEQSRLEFGMWLRFQGFGNQS 230
           LKDC D   + + +   L++G WLRFQG  N S
Sbjct: 222 LKDCSDCCVDSVSK--NLQYGPWLRFQGHKNSS 252

[Close]

BLAST of Lcy01g010640 vs. NCBI nr
Match: TXG46781.1 (hypothetical protein EZV62_026075 [Acer yangbiense])

HSP 1 Score: 172.6 bits (436), Expect = 6.7e-39
Identity = 81/238 (34.03%), Postives = 141/238 (59.24%), Query Frame = 0


Query: 4   EDVLKNIKGRFSHCLIEKLLTSRIISKVAIKNALIGAWRTREDFEVELIGKNLFLFKFEC 63
           E+V +      SHCLI K+L+ + +++ A  N +   W      E+E+I  N+F+F F  
Sbjct: 26  EEVRREGIADVSHCLIGKVLSGKKVNREAFINMINQLWSPFGQVEIEVIADNIFMFFFTK 85

Query: 64  NFDKDWIFKNGPWFFDKYLLILEQPVVNVSVSEIEFKKAAFWLRLFNLPLEFRNKQMAKK 123
           + D+D +++ GPW FD +L++LE+P+    +SE+ F K   W+++ NLPL + N++ A+ 
Sbjct: 86  SEDRDAVWRRGPWHFDNHLIVLEKPIGAGEISELGFDKVDMWVQIHNLPLMYMNRRAARS 145

Query: 124 LGDSLGEFLEVECDKEEFCGGNSMRIKVRLDITEPLCRGFMLKSEEIREGCWIAIRYERL 183
           L + +G+ +E+  D +E C G  +R+KVR+D+ +PL R   L  ++        + YERL
Sbjct: 146 LAEEIGQVIEIPADAKE-CRGKFLRVKVRIDVNKPLKRFIKLAVDDTERVVVAPLIYERL 205

Query: 184 PEFCFKCGRIGHVLKDC-HDKQKEEMQEQSRLEFGMWLRFQGFGNQSKKPNSNQNNDN 241
           P+FC+ CG++GHVL++C +D+ + +  E    +FG WLR  G     +KP  +    +
Sbjct: 206 PKFCYACGKLGHVLRECPNDEARIDALEGVSTQFGAWLRVPGPDVGKQKPQKSMGQQS 262

[Close]

BLAST of Lcy01g010640 vs. NCBI nr
Match: GAU21788.1 (hypothetical protein TSUD_329120, partial [Trifolium subterraneum])

HSP 1 Score: 171.8 bits (434), Expect = 1.1e-38
Identity = 89/223 (39.91%), Postives = 133/223 (59.64%), Query Frame = 0


Query: 4   EDVLKNIKGRFSHCLIEKLLTSRIISKVAIKNALIGAWRTREDFEVELIGKNLFLFKFEC 63
           E+ + N    FS  L+ K+ T    +  A K  +  AWR+R   E++ + KNLFLFKF  
Sbjct: 21  EEEVCNDDESFSRTLVGKIWTESPYNIRAFKQTMTQAWRSRNPIEIQDLNKNLFLFKFAT 80

Query: 64  NFDKDWIFKNGPWFFDKYLLILEQPVVNVSVSEIEFKKAAFWLRLFNLPLEFRNKQMAKK 123
             + D + KNGPW FD+ LLIL +   N   SE+     +FW+R+++LPL+ R++ +AKK
Sbjct: 81  RREADLVCKNGPWSFDRNLLILNRISGNEQPSELAMDSVSFWVRVYDLPLKLRSEGIAKK 140

Query: 124 LGDSLGEFLEVECDKEEFCGGNSMRIKVRLDITEPLCRGFMLKSEEIREGCWIAIRYERL 183
           LG+++G F E++  KE    G  +R++V +D+ +PL RG  L  +   +  W+  +YERL
Sbjct: 141 LGNTVGTFEEMDM-KESNRMGKFLRMRVYVDLKKPLKRGSKLNFQ--GKEIWVDYKYERL 200

Query: 184 PEFCFKCGRIGHVLKDCHDKQKEEMQEQSRLE-----FGMWLR 222
           P FCF CGRIGH ++DC D +  +  + S LE     FG WLR
Sbjct: 201 PNFCFACGRIGHQMRDCEDIEDHDEVQYSELEEKQQAFGPWLR 240

[Close]

BLAST of Lcy01g010640 vs. NCBI nr
Match: TXG54301.1 (hypothetical protein EZV62_019557 [Acer yangbiense])

HSP 1 Score: 171.4 bits (433), Expect = 1.5e-38
Identity = 79/222 (35.59%), Postives = 136/222 (61.26%), Query Frame = 0


Query: 1   MGTEDVLKNIKGRFSHCLIEKLLTSRIISKVAIKNALIGAWRTREDFEVELIGKNLFLFK 60
           +G EDV        +HCL+ K+L+ R +++ A +  +   W    + ++E++ +N+FLF 
Sbjct: 32  VGEEDV--------NHCLVGKILSGRRVNREAFRMVIESLWSPFGNVDIEMVSENVFLFF 91

Query: 61  FECNFDKDWIFKNGPWFFDKYLLILEQPVVNVSVSEIEFKKAAFWLRLFNLPLEFRNKQM 120
           F    D++ ++  GPW FDK LL+LE+P     +S+++F KA FW+++ ++P+   N++ 
Sbjct: 92  FNKPEDRNKVWDRGPWHFDKCLLVLEKPEGTGEISKLKFNKADFWIQIHDIPIMCMNRRT 151

Query: 121 AKKLGDSLGEFLEVECDKEEFCGGNSMRIKVRLDITEPLCRGFMLKSEEIREGCWIAIRY 180
           AK L + +GE +E+  D  + C G  +R+KVR+DI++PL R   L  +       + ++Y
Sbjct: 152 AKWLAEQIGEVIEIPTDSRD-CWGKFLRVKVRIDISKPLKRWLRLGLDRSGNIVVVGLKY 211

Query: 181 ERLPEFCFKCGRIGHVLKDCHDKQ-KEEMQEQSRLEFGMWLR 222
           ERLPEFC+ CG +GH + +C D + K+E  E + L FG W+R
Sbjct: 212 ERLPEFCYACGWLGHGISECPDTEAKKEAMEGATLRFGPWMR 244

[Close]

BLAST of Lcy01g010640 vs. TAIR 10
Match: AT5G36228.1 (nucleic acid binding;zinc ion binding )

HSP 1 Score: 67.0 bits (162), Expect = 3.7e-11
Identity = 41/172 (23.84%), Postives = 77/172 (44.77%), Query Frame = 0


Query: 41  WRTREDFEVELIGKNLFLFKFECNFDKDWIFKNGPWFFDKYLLILEQPVVNVSVSEIEFK 100
           W         ++    F  +F    D     +  PW F+++ + L++     +   + F 
Sbjct: 62  WGLGTQVHGRILDDRCFQVRFRSEIDLLNGLRRAPWVFNEWFIALQRWEDFPTEDFLTF- 121

Query: 101 KAAFWLRLFNLPLEFRNKQMAKKLGDSLGEFLEVECDKEEFCGGNSMRIKVRLDITEPLC 160
               W+ +  +PL + +++  + +  +LGE + ++ ++E       +R+KVR+D TEPL 
Sbjct: 122 -IDVWVHIRGIPLPYVSERTVEIIASTLGEVVAMDFNEETTSQITFIRVKVRMDFTEPL- 181

Query: 161 RGFMLKSEEIREGCWIAIRYERLPEFCFKCGRIGHVLKDC-HDKQKEEMQEQ 212
           R F       RE   I   YE+L   C  C R+ H +  C +   +EEM  +
Sbjct: 182 RFFRRVRFASRERAMIGFEYEKLQRVCTNCCRVNHQVSHCPYVVHQEEMDNE 230

[Close]

BLAST of Lcy01g010640 vs. TAIR 10
Match: AT3G42140.1 (zinc ion binding;nucleic acid binding )

HSP 1 Score: 60.1 bits (144), Expect = 4.5e-09
Identity = 36/163 (22.09%), Postives = 69/163 (42.33%), Query Frame = 0


Query: 42  RTREDFEVELIGKNLFLFKFECNFDKD----WIFKNGPWFFDKYLLILEQPVVNVSVSEI 101
           R  ++ + E++G+ L + K E  F  +     I + GPW F+ ++ ++++       S+ 
Sbjct: 43  RCPKNVDEEVVGRILEIHKIEFLFQSEESMFSILRRGPWSFNDWMCVIQR--WTKLHSDA 102

Query: 102 EFKKAAFWLRLFNLPLEFRNKQMAKKLGDSLGEFLEVECDKEEFCGGNSMRIKVRLDITE 161
           EFK+  FW+++  +PL F   ++   +G+ +G FLE                        
Sbjct: 103 EFKRIPFWIQIRGIPLRFLTARIITSIGERMGLFLETNLG-------------------- 162

Query: 162 PLCRGFMLKSEEIREGCWIAIRYERLPEFCFKCGRIGHVLKDC 201
                        R+   +  +YE+L  FC  CG + H   +C
Sbjct: 163 -------------RDVSVLKFQYEKLKNFCTTCGMLSHDASEC 170

The following BLAST results are available for this feature:

BLAST of Lcy01g010640 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy01g010640 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DU55	1.6e-49	41.06	uncharacterized protein LOC111023135 OS=Momordica charantia OX=3673 GN=LOC111023...	[more]
A0A6J1BSZ1	2.8e-43	42.25	uncharacterized protein LOC111005481 OS=Momordica charantia OX=3673 GN=LOC111005...	[more]
A0A5C7GPP6	3.3e-39	34.03	CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_02607...	[more]
A0A2Z6LV25	5.5e-39	39.91	Uncharacterized protein (Fragment) OS=Trifolium subterraneum OX=3900 GN=TSUD_329...	[more]
A0A5C7HBM7	7.2e-39	35.59	CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_01955...	[more]

BLAST of Lcy01g010640 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022156185.1	3.2e-49	41.06	uncharacterized protein LOC111023135 [Momordica charantia] >XP_022156186.1 uncha...	[more]
XP_022132681.1	5.9e-43	42.25	uncharacterized protein LOC111005481 [Momordica charantia]	[more]
TXG46781.1	6.7e-39	34.03	hypothetical protein EZV62_026075 [Acer yangbiense]	[more]
GAU21788.1	1.1e-38	39.91	hypothetical protein TSUD_329120, partial [Trifolium subterraneum]	[more]
TXG54301.1	1.5e-38	35.59	hypothetical protein EZV62_019557 [Acer yangbiense]	[more]

BLAST of Lcy01g010640 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G36228.1	3.7e-11	23.84	nucleic acid binding;zinc ion binding	[more]
AT3G42140.1	4.5e-09	22.09	zinc ion binding;nucleic acid binding	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025836	Zinc knuckle CX2CX4HX4C	PFAM	PF14392	zf-CCHC_4	coord: 153..201 e-value: 1.7E-13 score: 50.0
IPR025558	Domain of unknown function DUF4283	PFAM	PF14111	DUF4283	coord: 8..151 e-value: 5.3E-26 score: 90.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 320..380
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 323..338
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 227..246
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 227..241
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 348..374
None	No IPR available	PANTHER	PTHR31286:SF84	SUBFAMILY NOT NAMED	coord: 8..263
IPR040256	Uncharacterized protein At4g02000-like	PANTHER	PTHR31286	GLYCINE-RICH CELL WALL STRUCTURAL PROTEIN 1.8-LIKE	coord: 8..263
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 187..200 score: 10.114237
IPR036875	Zinc finger, CCHC-type superfamily	SUPERFAMILY	57756	Retrovirus zinc finger-like domains	coord: 185..206

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy01g010640.1	Lcy01g010640.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding