Lcy01g010090 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy01g010090
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	axial regulator YABBY 4-like
Location	Chr01: 29001395 .. 29003170 (+)
RNA-Seq Expression	Lcy01g010090
Synteny	Lcy01g010090

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTCTTTTACTCTCCCAATCTTTTCGTTTATCTTTGTCTCTACACAAGAGTTGTTGATACGTCAACAATGGAGCAACTCCTGGATCCCTCAGAACAGATTCGCTATGTGCAATGTGGTCTTTGTAGCACCATATTGCTGGTAAGATATATATACATATATATAAAAGAAGCTTATAAAATATAATAAATTAATAAAAACAGCTAGCAATAATTCATAGAGAAATTAGATGGTTTAATTTCTTTGTCATTTGAATATGTAATTGTAATATTATATGCACAGGTGAATGTGCCATACAGCAATTTGTCTATGGTGGTGAGTGTGAGATGTGGCAACTGCACTGGCCTCCTCTCTGTCAACATGGCCAAGCCCTCTTTTATCCCTTTTGATCTTCTCACTTCTCTCTCTCACAACTTGGTACTCTCTTTCTCTCATTTTTTTTTTAATTTAAGATAATTATATATGATCTGTTTTAATATATACTTTTGCCACAGCCAAAAGAGGCTTTCGAAGACTTTAACGTCCAGAAACAGTACAGCTTGGACAACCTCAACAACACGTCCGACCTCGAAACCTCGTACCACAACATTCAAAATCATGAAGATGATGATGTCATCATCATTCCACCCACTCCCGTTGTTAACAAGCGTAATATATATATATTTTCATAATTTGCTTCTTTGGAATATGTGTTTTGTTATTTGTTGAACGTTAATCACTTTTCTGATTATTTCAATTTTATTTGGTTTTGATTCTGTTCTCTACAAAGCCCCGGAGAAGAAACAACGAGCCCCATCAGCTTACAACCAATTCATCAAGTAAGATATATATAGATAACTGCATGTTTACTATAATTAAGATTGATGAGAAAATATATACATATATGAACCTTGGACTCATGCAAATGGGTGAATTTAGAACAAGGGTGCATACTGTTATATAAGTATCTCTAAATATCACGATATTAATATGCAGCTAAGTATTATTTATTAATTTAAACATGTAAAAGTTAAACTTGAAAAAAAAACAATAATGCAGGGAAGAGATTCGGAGGCTGAAGGCCGAGAACCCAACAATGGCTCATAAAGAGGCGTTCAAGACAGCTGCAAAAAATGTAAGAGTTTTGAAGCTTTGTTTGTTGATTAATAAAGAGGGGTATTTCTGCAAATCGTAATTAAATGAAAAGATGGGGGGCAATTTGCAATTTGCATGCGCAGTGGGCTCATCTTCCTCCAGTCAATGGCGAAGGAGATCAGGTGAGGAAGAAAAACGAGGCAGAGGGGAGGGGGAGCGTGATGTTAACTTAATCAGGTAATTAAATTAAATTAAGTTGAATTTAAAAAGGCGCGTAGGTGATTAATTAACACATATTATATATATATGAGTAGACAAAACATTAATGGGAGTAATTAATAAATATGAATTAGGGTTTGGCATTGGCAAGTATTTCTTTCCGTAGAATGATGATTTAATTTAAAATTTTAAGCTAAGCCAACGACCACATCCAAGTCGATTTCCTAAAATAGATTCACACTTAAATACAGAATTTATGAATAATTACTTCTATTCTCTCTCTTTACAGTAATTGAATGGATGCCACTGAGATTGAGATTGAGATTGAGATTGGCCTTTTCACCAAAACTAATTCAAATGTCAATACCTTTTTCTTCACTTTTTATTTGCTTTCACAGGTCAAATGGGCTGCCTTTCCATCTGCCAAAGACAATGAGAGATATTTAATTCCATGCTGACACAAAGAAACAAGACCGTTTATTTCC

mRNA sequence

CTTCTTTTACTCTCCCAATCTTTTCGTTTATCTTTGTCTCTACACAAGAGTTGTTGATACGTCAACAATGGAGCAACTCCTGGATCCCTCAGAACAGATTCGCTATGTGCAATGTGGTCTTTGTAGCACCATATTGCTGGTGAATGTGCCATACAGCAATTTGTCTATGGTGGTGAGTGTGAGATGTGGCAACTGCACTGGCCTCCTCTCTGTCAACATGGCCAAGCCCTCTTTTATCCCTTTTGATCTTCTCACTTCTCTCTCTCACAACTTGCCAAAAGAGGCTTTCGAAGACTTTAACGTCCAGAAACAGTACAGCTTGGACAACCTCAACAACACGTCCGACCTCGAAACCTCGTACCACAACATTCAAAATCATGAAGATGATGATGTCATCATCATTCCACCCACTCCCGTTGTTAACAAGCCCCCGGAGAAGAAACAACGAGCCCCATCAGCTTACAACCAATTCATCAAGGAAGAGATTCGGAGGCTGAAGGCCGAGAACCCAACAATGGCTCATAAAGAGGCGTTCAAGACAGCTGCAAAAAATTGGGCTCATCTTCCTCCAGTCAATGGCGAAGGAGATCAGGTGAGGAAGAAAAACGAGGCAGAGGGGAGGGGGAGCGTGATGTTAACTTAATCAGGTCAAATGGGCTGCCTTTCCATCTGCCAAAGACAATGAGAGATATTTAATTCCATGCTGACACAAAGAAACAAGACCGTTTATTTCC

Coding sequence (CDS)

ATGGAGCAACTCCTGGATCCCTCAGAACAGATTCGCTATGTGCAATGTGGTCTTTGTAGCACCATATTGCTGGTGAATGTGCCATACAGCAATTTGTCTATGGTGGTGAGTGTGAGATGTGGCAACTGCACTGGCCTCCTCTCTGTCAACATGGCCAAGCCCTCTTTTATCCCTTTTGATCTTCTCACTTCTCTCTCTCACAACTTGCCAAAAGAGGCTTTCGAAGACTTTAACGTCCAGAAACAGTACAGCTTGGACAACCTCAACAACACGTCCGACCTCGAAACCTCGTACCACAACATTCAAAATCATGAAGATGATGATGTCATCATCATTCCACCCACTCCCGTTGTTAACAAGCCCCCGGAGAAGAAACAACGAGCCCCATCAGCTTACAACCAATTCATCAAGGAAGAGATTCGGAGGCTGAAGGCCGAGAACCCAACAATGGCTCATAAAGAGGCGTTCAAGACAGCTGCAAAAAATTGGGCTCATCTTCCTCCAGTCAATGGCGAAGGAGATCAGGTGAGGAAGAAAAACGAGGCAGAGGGGAGGGGGAGCGTGATGTTAACTTAA

Protein sequence

MEQLLDPSEQIRYVQCGLCSTILLVNVPYSNLSMVVSVRCGNCTGLLSVNMAKPSFIPFDLLTSLSHNLPKEAFEDFNVQKQYSLDNLNNTSDLETSYHNIQNHEDDDVIIIPPTPVVNKPPEKKQRAPSAYNQFIKEEIRRLKAENPTMAHKEAFKTAAKNWAHLPPVNGEGDQVRKKNEAEGRGSVMLT

Homology

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BLAST of Lcy01g010090 vs. ExPASy Swiss-Prot
Match: Q9LDT3 (Axial regulator YABBY 4 OS=Arabidopsis thaliana OX=3702 GN=YAB4 PE=1 SV=2)

HSP 1 Score: 172.9 bits (437), Expect = 3.4e-42
Identity = 100/185 (54.05%), Postives = 126/185 (68.11%), Query Frame = 0


Query: 1   MEQLLDPSEQIRYVQCGLCSTILLVNVPYSNLSMVVSVRCGNCTGLLSVNMAKPSFIPFD 60
           +  L D   QI +VQCG C+TILLV+VP+++LSMVV+VRCG+CT LLSVN+ K SFIP  
Sbjct: 11  LNHLFDLPGQICHVQCGFCTTILLVSVPFTSLSMVVTVRCGHCTSLLSVNLMKASFIPLH 70

Query: 61  LLTSLSH-------------NLPKEAFEDFNVQKQYSLDNLNNTSDLETSYHNIQNHEDD 120
           LL SLSH              + +EA++  N +K+ S   L ++SD          +ED+
Sbjct: 71  LLASLSHLDETGKEEVAATDGVEEEAWK-VNQEKENSPTTLVSSSD----------NEDE 130

Query: 121 DVIIIPPTPVVNKPPEKKQRAPSAYNQFIKEEIRRLKAENPTMAHKEAFKTAAKNWAHLP 173
           DV  +    VVNKPPEK+QRAPSAYN FIKEEIRRLKA+NP+MAHKEAF  AAKNWAH P
Sbjct: 131 DVSRV--YQVVNKPPEKRQRAPSAYNCFIKEEIRRLKAQNPSMAHKEAFSLAAKNWAHFP 182

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BLAST of Lcy01g010090 vs. ExPASy Swiss-Prot
Match: O22152 (Axial regulator YABBY 1 OS=Arabidopsis thaliana OX=3702 GN=YAB1 PE=1 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 6.0e-31
Identity = 84/200 (42.00%), Postives = 110/200 (55.00%), Query Frame = 0


Query: 7   PSEQIRYVQCGLCSTILLVNVPYSNLSMVVSVRCGNCTGLLSVNMAK------------- 66
           PS+ + YVQC  C TIL VNVPY++L   V+VRCG CT LLSVNM               
Sbjct: 21  PSDHLCYVQCNFCQTILAVNVPYTSLFKTVTVRCGCCTNLLSVNMRSYVLPASNQLQLQL 80

Query: 67  ---PSFIPFDLLTSLSHNLPKEAFEDFNVQKQYSLDNLNNTSDLETSYHNIQNHEDDDVI 126
                F P D+L  L     ++A  + N+        +N   D+ +     Q HE     
Sbjct: 81  GPHSYFNPQDILEEL-----RDAPSNMNMMMMNQHPTMN---DIPSFMDLHQQHE----- 140

Query: 127 IIPPTPVVNKPPEKKQRAPSAYNQFIKEEIRRLKAENPTMAHKEAFKTAAKNWAHLPPVN 186
            IP  P VN+PPEK+QR PSAYN+FIKEEI+R+KA NP ++H+EAF  AAKNWAH P ++
Sbjct: 141 -IPKAPPVNRPPEKRQRVPSAYNRFIKEEIQRIKAGNPDISHREAFSAAAKNWAHFPHIH 200

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BLAST of Lcy01g010090 vs. ExPASy Swiss-Prot
Match: Q9XFB0 (Putative axial regulator YABBY 2 OS=Arabidopsis thaliana OX=3702 GN=YAB2 PE=1 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 1.6e-28
Identity = 71/165 (43.03%), Postives = 102/165 (61.82%), Query Frame = 0


Query: 8   SEQIRYVQCGLCSTILLVNVPYSNLSMVVSVRCGNCTGLLSVNMAKPSFIPFDLLTSLSH 67
           SE++ YV C  C+TIL V+VPY++L  +V+VRCG+CT LLS+N+            SL  
Sbjct: 7   SERVCYVHCSFCTTILAVSVPYASLFTLVTVRCGHCTNLLSLNIG----------VSLHQ 66

Query: 68  NLPKEAFEDFNVQKQY--SLDNLNNTSDLETSYHNIQNHEDDDVIIIPPTPVVNKPPEKK 127
                  +D    +Q+  SL    + +    S +N+  + D +   +PP     +PPEK+
Sbjct: 67  TSAPPIHQDLQPHRQHTTSLVTRKDCASSSRSTNNLSENIDREAPRMPPI----RPPEKR 126

Query: 128 QRAPSAYNQFIKEEIRRLKAENPTMAHKEAFKTAAKNWAHLPPVN 171
           QR PSAYN+FIKEEI+R+KA NP ++H+EAF TAAKNWAH P ++
Sbjct: 127 QRVPSAYNRFIKEEIQRIKACNPEISHREAFSTAAKNWAHFPHIH 157

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BLAST of Lcy01g010090 vs. ExPASy Swiss-Prot
Match: Q9XFB1 (Axial regulator YABBY 3 OS=Arabidopsis thaliana OX=3702 GN=YAB3 PE=1 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 3.1e-27
Identity = 67/178 (37.64%), Postives = 107/178 (60.11%), Query Frame = 0


Query: 8   SEQIRYVQCGLCSTILLVNVPYSNLSMVVSVRCGNCTGLLSVNMAKPSFIPFDLLTSLSH 67
           ++Q+ YV C  C T+L V+VP S+L   V+VRCG+C+ LLSV ++  + +    +++L H
Sbjct: 22  TDQLCYVHCSFCDTVLAVSVPPSSLFKTVTVRCGHCSNLLSVTVSMRALL-LPSVSNLGH 81

Query: 68  NL--PKEAFEDFNVQKQYSLDNLNNTSDLETSYHNIQNHEDDDVII-------------I 127
           +   P       N+ ++      N   ++  S+H   +H ++ +++             +
Sbjct: 82  SFLPPPPPPPPPNLLEEMRSGGQNINMNMMMSHHASAHHPNEHLVMATRNGRSVDHLQEM 141

Query: 128 PPTPVVNKPPEKKQRAPSAYNQFIKEEIRRLKAENPTMAHKEAFKTAAKNWAHLPPVN 171
           P  P  N+PPEK+QR PSAYN+FIKEEI+R+KA NP ++H+EAF  AAKNWAH P ++
Sbjct: 142 PRPPPANRPPEKRQRVPSAYNRFIKEEIQRIKAGNPDISHREAFSAAAKNWAHFPHIH 198

[Close]

BLAST of Lcy01g010090 vs. ExPASy Swiss-Prot
Match: Q8GW46 (Axial regulator YABBY 5 OS=Arabidopsis thaliana OX=3702 GN=YAB5 PE=1 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 3.1e-27
Identity = 71/163 (43.56%), Postives = 99/163 (60.74%), Query Frame = 0


Query: 8   SEQIRYVQCGLCSTILLVNVPYSNLSMVVSVRCGNCTGLLSVNMAKPSFIPFDLLTSLSH 67
           +EQ+ Y+ C  C+ IL VNVP S+L  +V+VRCG+CT L SVNMA           +   
Sbjct: 8   TEQLCYIPCNFCNIILAVNVPCSSLFDIVTVRCGHCTNLWSVNMA-----------AALQ 67

Query: 68  NLPKEAFEDFNVQKQYSLDNLNNTSDLETSYHNIQNHEDDDVIIIPPTPVVNKPPEKKQR 127
           +L +  F+  N    Y++    ++S   T   +  +        I    +VN+PPEK+QR
Sbjct: 68  SLSRPNFQATN----YAVPEYGSSSRSHTKIPSRISTR-----TITEQRIVNRPPEKRQR 127

Query: 128 APSAYNQFIKEEIRRLKAENPTMAHKEAFKTAAKNWAHLPPVN 171
            PSAYNQFIKEEI+R+KA NP ++H+EAF TAAKNWAH P ++
Sbjct: 128 VPSAYNQFIKEEIQRIKANNPDISHREAFSTAAKNWAHFPHIH 150

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BLAST of Lcy01g010090 vs. ExPASy TrEMBL
Match: A0A6J1KC10 (axial regulator YABBY 4-like OS=Cucurbita maxima OX=3661 GN=LOC111492500 PE=3 SV=1)

HSP 1 Score: 318.5 bits (815), Expect = 1.8e-83
Identity = 165/180 (91.67%), Postives = 167/180 (92.78%), Query Frame = 0


Query: 1   MEQLL-DPSEQIRYVQCGLCSTILLVNVPYSNLSMVVSVRCGNCTGLLSVNMAKPSFIPF 60
           +EQLL DPSEQIRYVQCGLCSTILLVNVPYSNLSMVVSVRCGNCTGLLSVNMAKPSFIPF
Sbjct: 5   LEQLLPDPSEQIRYVQCGLCSTILLVNVPYSNLSMVVSVRCGNCTGLLSVNMAKPSFIPF 64

Query: 61  DLLTSLSHNLPKEAFEDFNVQKQYSLDNLNNTSDLETSYHN-IQNHE--DDDVIIIPPTP 120
           DLLTSLSHNLPKE F+D NVQK   LDNLNNTSDL TSYHN IQNHE  DDD IIIPPTP
Sbjct: 65  DLLTSLSHNLPKEPFQDLNVQKHLCLDNLNNTSDLLTSYHNIIQNHEDDDDDAIIIPPTP 124

Query: 121 VVNKPPEKKQRAPSAYNQFIKEEIRRLKAENPTMAHKEAFKTAAKNWAHLPPVNGEGDQV 177
           VVNKPPEKKQRAPSAYNQFIKEEIRRLKAENP MAHKEAFKTAAKNWAHLPPVNGEGD V
Sbjct: 125 VVNKPPEKKQRAPSAYNQFIKEEIRRLKAENPGMAHKEAFKTAAKNWAHLPPVNGEGDHV 184

[Close]

BLAST of Lcy01g010090 vs. ExPASy TrEMBL
Match: A0A6J1HCV6 (axial regulator YABBY 4-like OS=Cucurbita moschata OX=3662 GN=LOC111462354 PE=3 SV=1)

HSP 1 Score: 312.0 bits (798), Expect = 1.7e-81
Identity = 162/181 (89.50%), Postives = 164/181 (90.61%), Query Frame = 0


Query: 1   MEQLL-DPSEQIRYVQCGLCSTILLVNVPYSNLSMVVSVRCGNCTGLLSVNMAKPSFIPF 60
           +E LL DPSEQIRYVQCGLCSTILLVNVPYSNLSMVVSVRCGNCTGLLSVNMAKPSFIPF
Sbjct: 5   LEHLLPDPSEQIRYVQCGLCSTILLVNVPYSNLSMVVSVRCGNCTGLLSVNMAKPSFIPF 64

Query: 61  DLLTSLSHNLPKEAFEDFNVQKQYSLDNLNNTSDLETSYHN-IQNHE---DDDVIIIPPT 120
           DLLTSLSHNLPKE F+D NVQK   LDN NN SDL TSYHN IQNHE   DDD IIIPPT
Sbjct: 65  DLLTSLSHNLPKEPFQDLNVQKHLCLDNRNNASDLLTSYHNIIQNHEDDDDDDAIIIPPT 124

Query: 121 PVVNKPPEKKQRAPSAYNQFIKEEIRRLKAENPTMAHKEAFKTAAKNWAHLPPVNGEGDQ 177
           PVVNKPPEKKQRAPSAYNQFIKEEIRRLKAENP MAHKEAFKTAAKNWAHLPPVNGEGD 
Sbjct: 125 PVVNKPPEKKQRAPSAYNQFIKEEIRRLKAENPGMAHKEAFKTAAKNWAHLPPVNGEGDH 184

[Close]

BLAST of Lcy01g010090 vs. ExPASy TrEMBL
Match: A0A5A7V5T8 (Axial regulator YABBY 4 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G002190 PE=3 SV=1)

HSP 1 Score: 306.6 bits (784), Expect = 7.3e-80
Identity = 164/189 (86.77%), Postives = 170/189 (89.95%), Query Frame = 0


Query: 1   MEQLL-DPSEQIRYVQCGLCSTILLVNVPYSNLSMVVSVRCGNCTGLLSVNMAKPSFIPF 60
           +EQLL D SEQIRYVQCGLCSTILLVNVPYSNLSMVVSVRCGNC GLLSVNMAKPSFIPF
Sbjct: 4   VEQLLADSSEQIRYVQCGLCSTILLVNVPYSNLSMVVSVRCGNCAGLLSVNMAKPSFIPF 63

Query: 61  DLLTSLSHNLPKEAF-EDFNVQKQYSLDNLNNT---SDLETSYHN-IQNHEDDDVIIIPP 120
           DLLTSLSHNLPKE F ++FNVQK Y LD+L+NT   SDL TSYHN IQNHEDDDVIIIPP
Sbjct: 64  DLLTSLSHNLPKEGFGQEFNVQKHYCLDSLSNTSSSSDLLTSYHNIIQNHEDDDVIIIPP 123

Query: 121 TPVVNKPPEKKQRAPSAYNQFIKEEIRRLKAENPTMAHKEAFKTAAKNWAHLPPVNGEGD 180
           TPVVNKPPEKKQRAPSAYNQFIKEEIRRLKAENP MAHKEAFKTAAKNWAHLPPVN EG 
Sbjct: 124 TPVVNKPPEKKQRAPSAYNQFIKEEIRRLKAENPAMAHKEAFKTAAKNWAHLPPVNAEGA 183

[Close]

BLAST of Lcy01g010090 vs. ExPASy TrEMBL
Match: A0A0A0LK60 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G348870 PE=3 SV=1)

HSP 1 Score: 305.1 bits (780), Expect = 2.1e-79
Identity = 163/189 (86.24%), Postives = 170/189 (89.95%), Query Frame = 0


Query: 1   MEQLL-DPSEQIRYVQCGLCSTILLVNVPYSNLSMVVSVRCGNCTGLLSVNMAKPSFIPF 60
           +EQLL D SEQIRYVQCGLCSTILLVNVPYSNLSMVVSVRCGNC GLLSVNMAKPSFIPF
Sbjct: 4   VEQLLADSSEQIRYVQCGLCSTILLVNVPYSNLSMVVSVRCGNCAGLLSVNMAKPSFIPF 63

Query: 61  DLLTSLSHNLPKEAF-EDFNVQKQYSLDNLNN---TSDLETSYHN-IQNHEDDDVIIIPP 120
           DLLTSLSHNLPKE F ++FNVQK Y LD+L+N   +SDL TSYHN IQNHEDDDVIIIPP
Sbjct: 64  DLLTSLSHNLPKEGFGQEFNVQKHYCLDSLSNSSSSSDLLTSYHNIIQNHEDDDVIIIPP 123

Query: 121 TPVVNKPPEKKQRAPSAYNQFIKEEIRRLKAENPTMAHKEAFKTAAKNWAHLPPVNGEGD 180
           TPVVNKPPEKKQRAPSAYNQFIKEEIRRLKAENP MAHKEAFKTAAKNWAHLPPVN EG 
Sbjct: 124 TPVVNKPPEKKQRAPSAYNQFIKEEIRRLKAENPAMAHKEAFKTAAKNWAHLPPVNAEGA 183

[Close]

BLAST of Lcy01g010090 vs. ExPASy TrEMBL
Match: A0A6J1BTL6 (axial regulator YABBY 4-like OS=Momordica charantia OX=3673 GN=LOC111005217 PE=3 SV=1)

HSP 1 Score: 271.9 bits (694), Expect = 2.0e-69
Identity = 151/185 (81.62%), Postives = 161/185 (87.03%), Query Frame = 0


Query: 1   MEQLLDPSEQIRYVQCGLCSTILLVNVPYSNLSMVVSVRCGNCTGLLSVNMAKPSFIPFD 60
           +E LLD SE+IRYVQCGLCSTILLVNVPYSNLSMVVSVRCGNCTGLLSVNMA PSFIPFD
Sbjct: 4   VEDLLDSSEEIRYVQCGLCSTILLVNVPYSNLSMVVSVRCGNCTGLLSVNMAMPSFIPFD 63

Query: 61  LLTSLSHNLPKE-AF-EDFNVQKQYSLDNLNNTSDLETSYHN-IQNHEDD-DVII-IPPT 120
           LLTSLSHNLPK+ AF +DF++         N TSDL  S HN IQ+HEDD D+II IPPT
Sbjct: 64  LLTSLSHNLPKQLAFGQDFDLN--------NVTSDLIASNHNIIQDHEDDPDLIINIPPT 123

Query: 121 PVVNKPPEKKQRAPSAYNQFIKEEIRRLKAENPTMAHKEAFKTAAKNWAHLPPVNG-EGD 180
           PVVNKPPEKKQRAPSAYNQFIKEEIRRLKAENP MAHKEAFKTAAKNWAHLPP +G EGD
Sbjct: 124 PVVNKPPEKKQRAPSAYNQFIKEEIRRLKAENPAMAHKEAFKTAAKNWAHLPPAHGEEGD 180

[Close]

BLAST of Lcy01g010090 vs. NCBI nr
Match: XP_022997624.1 (axial regulator YABBY 4-like [Cucurbita maxima] >XP_023545650.1 axial regulator YABBY 4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 318.5 bits (815), Expect = 3.8e-83
Identity = 165/180 (91.67%), Postives = 167/180 (92.78%), Query Frame = 0


Query: 1   MEQLL-DPSEQIRYVQCGLCSTILLVNVPYSNLSMVVSVRCGNCTGLLSVNMAKPSFIPF 60
           +EQLL DPSEQIRYVQCGLCSTILLVNVPYSNLSMVVSVRCGNCTGLLSVNMAKPSFIPF
Sbjct: 5   LEQLLPDPSEQIRYVQCGLCSTILLVNVPYSNLSMVVSVRCGNCTGLLSVNMAKPSFIPF 64

Query: 61  DLLTSLSHNLPKEAFEDFNVQKQYSLDNLNNTSDLETSYHN-IQNHE--DDDVIIIPPTP 120
           DLLTSLSHNLPKE F+D NVQK   LDNLNNTSDL TSYHN IQNHE  DDD IIIPPTP
Sbjct: 65  DLLTSLSHNLPKEPFQDLNVQKHLCLDNLNNTSDLLTSYHNIIQNHEDDDDDAIIIPPTP 124

Query: 121 VVNKPPEKKQRAPSAYNQFIKEEIRRLKAENPTMAHKEAFKTAAKNWAHLPPVNGEGDQV 177
           VVNKPPEKKQRAPSAYNQFIKEEIRRLKAENP MAHKEAFKTAAKNWAHLPPVNGEGD V
Sbjct: 125 VVNKPPEKKQRAPSAYNQFIKEEIRRLKAENPGMAHKEAFKTAAKNWAHLPPVNGEGDHV 184

[Close]

BLAST of Lcy01g010090 vs. NCBI nr
Match: KAG6598223.1 (Axial regulator YABBY 4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 316.6 bits (810), Expect = 1.4e-82
Identity = 164/180 (91.11%), Postives = 166/180 (92.22%), Query Frame = 0


Query: 1   MEQLL-DPSEQIRYVQCGLCSTILLVNVPYSNLSMVVSVRCGNCTGLLSVNMAKPSFIPF 60
           +E LL DPSEQIRYVQCGLCSTILLVNVPYSNLSMVVSVRCGNCTGLLSVNMAKPSFIPF
Sbjct: 5   LEHLLPDPSEQIRYVQCGLCSTILLVNVPYSNLSMVVSVRCGNCTGLLSVNMAKPSFIPF 64

Query: 61  DLLTSLSHNLPKEAFEDFNVQKQYSLDNLNNTSDLETSYHN-IQNHED--DDVIIIPPTP 120
           DLLTSLSHNLPKE F+D NVQK   LDNLNNTSDL TSYHN IQNHED  DD IIIPPTP
Sbjct: 65  DLLTSLSHNLPKEPFQDLNVQKHLCLDNLNNTSDLLTSYHNIIQNHEDDEDDAIIIPPTP 124

Query: 121 VVNKPPEKKQRAPSAYNQFIKEEIRRLKAENPTMAHKEAFKTAAKNWAHLPPVNGEGDQV 177
           VVNKPPEKKQRAPSAYNQFIKEEIRRLKAENP MAHKEAFKTAAKNWAHLPPVNGEGD V
Sbjct: 125 VVNKPPEKKQRAPSAYNQFIKEEIRRLKAENPGMAHKEAFKTAAKNWAHLPPVNGEGDHV 184

[Close]

BLAST of Lcy01g010090 vs. NCBI nr
Match: XP_022961645.1 (axial regulator YABBY 4-like [Cucurbita moschata])

HSP 1 Score: 312.0 bits (798), Expect = 3.6e-81
Identity = 162/181 (89.50%), Postives = 164/181 (90.61%), Query Frame = 0


Query: 1   MEQLL-DPSEQIRYVQCGLCSTILLVNVPYSNLSMVVSVRCGNCTGLLSVNMAKPSFIPF 60
           +E LL DPSEQIRYVQCGLCSTILLVNVPYSNLSMVVSVRCGNCTGLLSVNMAKPSFIPF
Sbjct: 5   LEHLLPDPSEQIRYVQCGLCSTILLVNVPYSNLSMVVSVRCGNCTGLLSVNMAKPSFIPF 64

Query: 61  DLLTSLSHNLPKEAFEDFNVQKQYSLDNLNNTSDLETSYHN-IQNHE---DDDVIIIPPT 120
           DLLTSLSHNLPKE F+D NVQK   LDN NN SDL TSYHN IQNHE   DDD IIIPPT
Sbjct: 65  DLLTSLSHNLPKEPFQDLNVQKHLCLDNRNNASDLLTSYHNIIQNHEDDDDDDAIIIPPT 124

Query: 121 PVVNKPPEKKQRAPSAYNQFIKEEIRRLKAENPTMAHKEAFKTAAKNWAHLPPVNGEGDQ 177
           PVVNKPPEKKQRAPSAYNQFIKEEIRRLKAENP MAHKEAFKTAAKNWAHLPPVNGEGD 
Sbjct: 125 PVVNKPPEKKQRAPSAYNQFIKEEIRRLKAENPGMAHKEAFKTAAKNWAHLPPVNGEGDH 184

[Close]

BLAST of Lcy01g010090 vs. NCBI nr
Match: KAG7029204.1 (Axial regulator YABBY 4, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 310.8 bits (795), Expect = 7.9e-81
Identity = 164/181 (90.61%), Postives = 166/181 (91.71%), Query Frame = 0


Query: 1   MEQLL-DPSEQIRYVQCGLCSTILLVNVPYSNLSMVVSVRCGNCTGLLSVNMAKPSFIPF 60
           +E LL DPSEQIRYVQCGLCSTILLVNVPYSNLSMVVSVRCGNCTGLLSVNMAKPSFIPF
Sbjct: 5   LEHLLPDPSEQIRYVQCGLCSTILLVNVPYSNLSMVVSVRCGNCTGLLSVNMAKPSFIPF 64

Query: 61  DLLTSLSHNLPKEAFEDFNVQKQYSLDNLNNTSDLETSYHN-IQNHED--DDVIIIPPTP 120
           DLLTSLSHNLPKE F+D NVQK   LDNLNNTSDL TSYHN IQNHED  DD IIIPPTP
Sbjct: 65  DLLTSLSHNLPKEPFQDLNVQKHLCLDNLNNTSDLLTSYHNIIQNHEDDEDDGIIIPPTP 124

Query: 121 VVNKPPEKKQRAPSAYNQFIKEEIRRLKAENPTMAHKEAFKTAAKNWAHLPPVNG-EGDQ 177
           VVNKPPEKKQRAPSAYNQFIKEEIRRLKAENP MAHKEAFKTAAKNWAHLPPVNG EGD 
Sbjct: 125 VVNKPPEKKQRAPSAYNQFIKEEIRRLKAENPGMAHKEAFKTAAKNWAHLPPVNGEEGDH 184

[Close]

BLAST of Lcy01g010090 vs. NCBI nr
Match: KAA0061079.1 (axial regulator YABBY 4 isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 306.6 bits (784), Expect = 1.5e-79
Identity = 164/189 (86.77%), Postives = 170/189 (89.95%), Query Frame = 0


Query: 1   MEQLL-DPSEQIRYVQCGLCSTILLVNVPYSNLSMVVSVRCGNCTGLLSVNMAKPSFIPF 60
           +EQLL D SEQIRYVQCGLCSTILLVNVPYSNLSMVVSVRCGNC GLLSVNMAKPSFIPF
Sbjct: 4   VEQLLADSSEQIRYVQCGLCSTILLVNVPYSNLSMVVSVRCGNCAGLLSVNMAKPSFIPF 63

Query: 61  DLLTSLSHNLPKEAF-EDFNVQKQYSLDNLNNT---SDLETSYHN-IQNHEDDDVIIIPP 120
           DLLTSLSHNLPKE F ++FNVQK Y LD+L+NT   SDL TSYHN IQNHEDDDVIIIPP
Sbjct: 64  DLLTSLSHNLPKEGFGQEFNVQKHYCLDSLSNTSSSSDLLTSYHNIIQNHEDDDVIIIPP 123

Query: 121 TPVVNKPPEKKQRAPSAYNQFIKEEIRRLKAENPTMAHKEAFKTAAKNWAHLPPVNGEGD 180
           TPVVNKPPEKKQRAPSAYNQFIKEEIRRLKAENP MAHKEAFKTAAKNWAHLPPVN EG 
Sbjct: 124 TPVVNKPPEKKQRAPSAYNQFIKEEIRRLKAENPAMAHKEAFKTAAKNWAHLPPVNAEGA 183

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BLAST of Lcy01g010090 vs. TAIR 10
Match: AT1G23420.1 (Plant-specific transcription factor YABBY family protein )

HSP 1 Score: 172.9 bits (437), Expect = 2.4e-43
Identity = 100/185 (54.05%), Postives = 126/185 (68.11%), Query Frame = 0


Query: 1   MEQLLDPSEQIRYVQCGLCSTILLVNVPYSNLSMVVSVRCGNCTGLLSVNMAKPSFIPFD 60
           +  L D   QI +VQCG C+TILLV+VP+++LSMVV+VRCG+CT LLSVN+ K SFIP  
Sbjct: 11  LNHLFDLPGQICHVQCGFCTTILLVSVPFTSLSMVVTVRCGHCTSLLSVNLMKASFIPLH 70

Query: 61  LLTSLSH-------------NLPKEAFEDFNVQKQYSLDNLNNTSDLETSYHNIQNHEDD 120
           LL SLSH              + +EA++  N +K+ S   L ++SD          +ED+
Sbjct: 71  LLASLSHLDETGKEEVAATDGVEEEAWK-VNQEKENSPTTLVSSSD----------NEDE 130

Query: 121 DVIIIPPTPVVNKPPEKKQRAPSAYNQFIKEEIRRLKAENPTMAHKEAFKTAAKNWAHLP 173
           DV  +    VVNKPPEK+QRAPSAYN FIKEEIRRLKA+NP+MAHKEAF  AAKNWAH P
Sbjct: 131 DVSRV--YQVVNKPPEKRQRAPSAYNCFIKEEIRRLKAQNPSMAHKEAFSLAAKNWAHFP 182

[Close]

BLAST of Lcy01g010090 vs. TAIR 10
Match: AT2G45190.1 (Plant-specific transcription factor YABBY family protein )

HSP 1 Score: 135.6 bits (340), Expect = 4.3e-32
Identity = 84/200 (42.00%), Postives = 110/200 (55.00%), Query Frame = 0


Query: 7   PSEQIRYVQCGLCSTILLVNVPYSNLSMVVSVRCGNCTGLLSVNMAK------------- 66
           PS+ + YVQC  C TIL VNVPY++L   V+VRCG CT LLSVNM               
Sbjct: 21  PSDHLCYVQCNFCQTILAVNVPYTSLFKTVTVRCGCCTNLLSVNMRSYVLPASNQLQLQL 80

Query: 67  ---PSFIPFDLLTSLSHNLPKEAFEDFNVQKQYSLDNLNNTSDLETSYHNIQNHEDDDVI 126
                F P D+L  L     ++A  + N+        +N   D+ +     Q HE     
Sbjct: 81  GPHSYFNPQDILEEL-----RDAPSNMNMMMMNQHPTMN---DIPSFMDLHQQHE----- 140

Query: 127 IIPPTPVVNKPPEKKQRAPSAYNQFIKEEIRRLKAENPTMAHKEAFKTAAKNWAHLPPVN 186
            IP  P VN+PPEK+QR PSAYN+FIKEEI+R+KA NP ++H+EAF  AAKNWAH P ++
Sbjct: 141 -IPKAPPVNRPPEKRQRVPSAYNRFIKEEIQRIKAGNPDISHREAFSAAAKNWAHFPHIH 200

[Close]

BLAST of Lcy01g010090 vs. TAIR 10
Match: AT1G08465.1 (Plant-specific transcription factor YABBY family protein )

HSP 1 Score: 127.5 bits (319), Expect = 1.2e-29
Identity = 71/165 (43.03%), Postives = 102/165 (61.82%), Query Frame = 0


Query: 8   SEQIRYVQCGLCSTILLVNVPYSNLSMVVSVRCGNCTGLLSVNMAKPSFIPFDLLTSLSH 67
           SE++ YV C  C+TIL V+VPY++L  +V+VRCG+CT LLS+N+            SL  
Sbjct: 7   SERVCYVHCSFCTTILAVSVPYASLFTLVTVRCGHCTNLLSLNIG----------VSLHQ 66

Query: 68  NLPKEAFEDFNVQKQY--SLDNLNNTSDLETSYHNIQNHEDDDVIIIPPTPVVNKPPEKK 127
                  +D    +Q+  SL    + +    S +N+  + D +   +PP     +PPEK+
Sbjct: 67  TSAPPIHQDLQPHRQHTTSLVTRKDCASSSRSTNNLSENIDREAPRMPPI----RPPEKR 126

Query: 128 QRAPSAYNQFIKEEIRRLKAENPTMAHKEAFKTAAKNWAHLPPVN 171
           QR PSAYN+FIKEEI+R+KA NP ++H+EAF TAAKNWAH P ++
Sbjct: 127 QRVPSAYNRFIKEEIQRIKACNPEISHREAFSTAAKNWAHFPHIH 157

[Close]

BLAST of Lcy01g010090 vs. TAIR 10
Match: AT2G26580.1 (plant-specific transcription factor YABBY family protein )

HSP 1 Score: 123.2 bits (308), Expect = 2.2e-28
Identity = 71/163 (43.56%), Postives = 99/163 (60.74%), Query Frame = 0


Query: 8   SEQIRYVQCGLCSTILLVNVPYSNLSMVVSVRCGNCTGLLSVNMAKPSFIPFDLLTSLSH 67
           +EQ+ Y+ C  C+ IL VNVP S+L  +V+VRCG+CT L SVNMA           +   
Sbjct: 8   TEQLCYIPCNFCNIILAVNVPCSSLFDIVTVRCGHCTNLWSVNMA-----------AALQ 67

Query: 68  NLPKEAFEDFNVQKQYSLDNLNNTSDLETSYHNIQNHEDDDVIIIPPTPVVNKPPEKKQR 127
           +L +  F+  N    Y++    ++S   T   +  +        I    +VN+PPEK+QR
Sbjct: 68  SLSRPNFQATN----YAVPEYGSSSRSHTKIPSRISTR-----TITEQRIVNRPPEKRQR 127

Query: 128 APSAYNQFIKEEIRRLKAENPTMAHKEAFKTAAKNWAHLPPVN 171
            PSAYNQFIKEEI+R+KA NP ++H+EAF TAAKNWAH P ++
Sbjct: 128 VPSAYNQFIKEEIQRIKANNPDISHREAFSTAAKNWAHFPHIH 150

[Close]

BLAST of Lcy01g010090 vs. TAIR 10
Match: AT2G26580.2 (plant-specific transcription factor YABBY family protein )

HSP 1 Score: 123.2 bits (308), Expect = 2.2e-28
Identity = 71/163 (43.56%), Postives = 99/163 (60.74%), Query Frame = 0


Query: 8   SEQIRYVQCGLCSTILLVNVPYSNLSMVVSVRCGNCTGLLSVNMAKPSFIPFDLLTSLSH 67
           +EQ+ Y+ C  C+ IL VNVP S+L  +V+VRCG+CT L SVNMA           +   
Sbjct: 8   TEQLCYIPCNFCNIILAVNVPCSSLFDIVTVRCGHCTNLWSVNMA-----------AALQ 67

Query: 68  NLPKEAFEDFNVQKQYSLDNLNNTSDLETSYHNIQNHEDDDVIIIPPTPVVNKPPEKKQR 127
           +L +  F+  N    Y++    ++S   T   +  +        I    +VN+PPEK+QR
Sbjct: 68  SLSRPNFQATN----YAVPEYGSSSRSHTKIPSRISTR-----TITEQRIVNRPPEKRQR 127

Query: 128 APSAYNQFIKEEIRRLKAENPTMAHKEAFKTAAKNWAHLPPVN 171
            PSAYNQFIKEEI+R+KA NP ++H+EAF TAAKNWAH P ++
Sbjct: 128 VPSAYNQFIKEEIQRIKANNPDISHREAFSTAAKNWAHFPHIH 150

The following BLAST results are available for this feature:

BLAST of Lcy01g010090 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LDT3	3.4e-42	54.05	Axial regulator YABBY 4 OS=Arabidopsis thaliana OX=3702 GN=YAB4 PE=1 SV=2	[more]
O22152	6.0e-31	42.00	Axial regulator YABBY 1 OS=Arabidopsis thaliana OX=3702 GN=YAB1 PE=1 SV=1	[more]
Q9XFB0	1.6e-28	43.03	Putative axial regulator YABBY 2 OS=Arabidopsis thaliana OX=3702 GN=YAB2 PE=1 SV...	[more]
Q9XFB1	3.1e-27	37.64	Axial regulator YABBY 3 OS=Arabidopsis thaliana OX=3702 GN=YAB3 PE=1 SV=1	[more]
Q8GW46	3.1e-27	43.56	Axial regulator YABBY 5 OS=Arabidopsis thaliana OX=3702 GN=YAB5 PE=1 SV=1	[more]

BLAST of Lcy01g010090 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KC10	1.8e-83	91.67	axial regulator YABBY 4-like OS=Cucurbita maxima OX=3661 GN=LOC111492500 PE=3 SV...	[more]
A0A6J1HCV6	1.7e-81	89.50	axial regulator YABBY 4-like OS=Cucurbita moschata OX=3662 GN=LOC111462354 PE=3 ...	[more]
A0A5A7V5T8	7.3e-80	86.77	Axial regulator YABBY 4 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C...	[more]
A0A0A0LK60	2.1e-79	86.24	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G348870 PE=3 SV=1	[more]
A0A6J1BTL6	2.0e-69	81.62	axial regulator YABBY 4-like OS=Momordica charantia OX=3673 GN=LOC111005217 PE=3...	[more]

BLAST of Lcy01g010090 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022997624.1	3.8e-83	91.67	axial regulator YABBY 4-like [Cucurbita maxima] >XP_023545650.1 axial regulator ...	[more]
KAG6598223.1	1.4e-82	91.11	Axial regulator YABBY 4, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022961645.1	3.6e-81	89.50	axial regulator YABBY 4-like [Cucurbita moschata]	[more]
KAG7029204.1	7.9e-81	90.61	Axial regulator YABBY 4, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAA0061079.1	1.5e-79	86.77	axial regulator YABBY 4 isoform X2 [Cucumis melo var. makuwa]	[more]

BLAST of Lcy01g010090 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G23420.1	2.4e-43	54.05	Plant-specific transcription factor YABBY family protein	[more]
AT2G45190.1	4.3e-32	42.00	Plant-specific transcription factor YABBY family protein	[more]
AT1G08465.1	1.2e-29	43.03	Plant-specific transcription factor YABBY family protein	[more]
AT2G26580.1	2.2e-28	43.56	plant-specific transcription factor YABBY family protein	[more]
AT2G26580.2	2.2e-28	43.56	plant-specific transcription factor YABBY family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036910	High mobility group box domain superfamily	GENE3D	1.10.30.10	High mobility group box domain	coord: 117..183 e-value: 1.0E-8 score: 37.4
IPR036910	High mobility group box domain superfamily	SUPERFAMILY	47095	HMG-box	coord: 116..168
IPR006780	YABBY protein	PFAM	PF04690	YABBY	coord: 7..169 e-value: 2.2E-55 score: 187.7
IPR006780	YABBY protein	PANTHER	PTHR31675	PROTEIN YABBY 6-RELATED	coord: 2..180
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 165..191
None	No IPR available	PANTHER	PTHR31675:SF8	AXIAL REGULATOR YABBY 4	coord: 2..180
None	No IPR available	CDD	cd01390	HMGB-UBF_HMG-box	coord: 127..168 e-value: 9.36447E-6 score: 39.9186

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy01g010090.1	Lcy01g010090.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045165	cell fate commitment
biological_process	GO:0048481	plant ovule development
biological_process	GO:0009944	polarity specification of adaxial/abaxial axis
biological_process	GO:0007275	multicellular organism development
cellular_component	GO:0005634	nucleus