Lcy01g008540 (gene) Sponge gourd (P93075) v1

Overview
NameLcy01g008540
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionReverse transcriptase domain-containing protein
LocationChr01: 20109582 .. 20115969 (+)
RNA-Seq ExpressionLcy01g008540
SyntenyLcy01g008540
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATCGTGTTTTCCGTTCCGGACCCTGGACTTTCGATAAGAGTCTGGTGGTGCTGGTAGTACCTACGGATGTTGATGATCCAATGAGTTTATCGTTCACCACTACCTCGTTCTGGGTTCAAATTCAAAGAGTTCCGTTCAAGTTTTTGACTAGGGACATGGCAATAAAGCTCGAGCAGTACATTGGGCGAGTGGAAGAGGTTGGACCGGTTATGAGGGTTCGGGTTGCCTTGGACAAATCAAAACCTCTTCGGCGCTGATTAATAGTTCAAGGACCTGATAACCACGAGCTACTGTGCCCACTAAGGTATGAACGTCTTCCAGATTTTTGTTATGACTGTGGTCTCACTGGGCATTCCCAGCGAGAATGTCCTTTGGTGTCCTTTGAACGTCGTCCTGATAAGCTGGAATATGGGGCATGGCTTCGGGCGGACTTTGTCCCTTCGACAGTGATCCAGGAAAACCTTGAGAAGAATACCCCTCATACGGAAGTAAATGATGCAGCTGACGACACTGACTTATCAACTTTGACGAGTGTAGGAGAGGATACGGCAGCGGTGACTACTGCCCAACCGCCAACGAGATCACAAGGCAACGAACCGCCTAAAACTGGGGAACAAGAGCCTACTTCTACGCCTAATCTGACGACTGCTATACCTAAGTCTTCGAACATAGTGGTTGAGAATTTACAAAAGAAAAAAGGTAAAAGAATATTGGGTTTTGGATCAGAAATCAACACTGACGTGGGTCAGGAAGCAACAGGACCTGAGATGACTGCCTCTACCGTAATGTCGATGGTGGTTGGGTCTAAGCGAAAAGAGGGATGGAAACGTAAGGCTCGTAATGTTGCAAGTGACAATGAGCCAATGGACTACTACCACCCAGTATTAACTCGCAAACGACGCCATCAAGATCCTGAGAGCTCCTCTCTTGATGGTGCTCAGAAGAAACTTAAAGGTACATCTGATGAACGTGGGGCTCCTCTAATTGACAATGCTGACCCTCTTTTGTCGGTGGAGGCTGGATACTAGCCCCGCCGGTCGCCATGAATGCCATTTTCTGGAATGTTCGGGGATTGGGGGCTCCCCAGGCATTCCGACACTTGCATAAGTTGGTGTAGGCTAATAAACCCCAGGTGGTGTTCTTATCGGAGACGAAACTATACCAATCAAAGATGGATATTGATAACTGTCCGAAAGGTAGTTATTTAGGCCTTAATTCTATAGGGATTTGTGTGTCTTTTGTGCTTAATAGGGTTGCTTTTAGATGAATATTATATGTTTTAACCCATTTGGAAGAATGGAGGCAATGAAAGTTATTTTGTGCAGAAAATATTGCTGAGCGACGTGAGGGAGCAAAATCTGTGCTGCAGCAAACCTGGGAGCAAAACTGCCACGTCACAGCTCGTTATCCATTTTAATAAAGTGGCGTTAGCTGAATTATTTTCGGATCTAAGAAGCTTGGAAAGTCTGCCATGTGTCCAATTTAACCTAAACCTTATCTTATAAAAGGAGGAGCCGTCGAAGTTAAAGGCATTCACGATTTGGAGACCGAATCAATCGGCCGGAGGCCGGATTGACGGCGGAATGGAGATCTAAGAAGACCATTTGCGATTCCACTCAAGGAGACGAAGTTCTTCCATGTTCTTGGTGGTTTTGGAGCAGCCGTTTCATCTCCCTAATTACTAAAAGGATTAGTATTTCTTGTTTATTTCGCATTATGGATGTGCTTATCGAGATTGTAACGTATTTTATGTTTTCAATCATGAACTAATTGCTTTGTAGGCATAGGTTAAGAATTATGTGATTGTTATATTTATAAATCTGGAAATTCTATTTGATCATGATCGTCTTGAATTATTGTTGATCTTTAATTTCATTACGTGCCCGCCTAGCTAGCCGGTATGTATAGCTTCTCCTAGTTTCAGGGATGATTTAGGAGTTGTGTGGCGATAATTCACGCTAGATCATTGTGTATTGGTGAACGCCAGTGACTGAGTTAGGGATAGCCAGTTGCCTAGTGCTTGATCGGTAGAGCTTCATTGGTTTTGAAACATATTCCAAAAAATCCGGAGTTCCGGGAGGATCCCGCTGATAATACTGCGAGAGATTGACGGATCAAAAGAATTGCTGGAGCATTTTTAAACAATTACAGAAGTCTTAACCTGTGTCTGTTTCCATTCTGTTTTCTCTGTCGTAATCATTTACTGCTTTCGCATATCTTTTGTTTCAGCATGTTAAAAACTCAATCAATTTAACCAACCTTTTGAAATCACTAAAAAGGCAAATTAAATCAATAGAGGTAGGCATTTCAAGACCCTGTGGATACGATAAATACTTATCACTTGCTGCTAGATTGTGTATACTTGCACAGTATTCTGGAGCTAATTTATCTCATATTTTTAACCACTTCAGAATTGCAACAGATATAGTGAAACAACGTTTGGGATATACGAGTTGTTTTGAGGTGAGTAGCTCAGGCCGAAGTGGCGGTATAGCTTTTTTGTGGAATTCAGATGTGGTGTTCAGCCTGATATCTTTCTCTAATCATCATATTGATGGGTGGATAGAGTGGGACCAGAAACGTTGGCGGATCACTGGGTTTTATGGCTTCTTTGAATCTGATGCTCACCACCGTTCGTGGAACCTCCTTCGCAAATTGCGGGGCTCTTCGGACACACCTTGGTTGGTGGGTGGCGATTTTAATGCGATCCTTCAACATGCGGAGAAATTTGGCAGGCGTATGACTGTGGAAAACGAGTTGGATGCCTTCCGATTGGCACTGGAGGATTGCTCGCTATCTGATATGGGTTTATCGGGGGACATATATACGTGGTCTAATCGACGGCCAGGGGCGAAACTCATTTCTGAACGCCTTGATCGTGTGGTATGTACAAATACCTGGCGTTTGTTATTCCCGCAGAGTGAGATTATTCACTTGGACTACCATGGATTTGACCATCGACCAGTGGGTCTACTATTATATCCCACGTCACCACTACTTCGACCATTCGGGAAGCGACTCTCCCGTTTTGAAGATGTATGGATGCGATACCCGCACTGTTCGCAGATAGTGGAGTCAGGTTGGAATTCAGTGTCTGGCTGGCTTGATCCATATCAGCTTGTACAGAAGACGGGTGTTTGTATGAAAGAGCAAAGTGTTTGGGGAAAGTCAAAAAAGGGCAACTATGGGCACCGTATAGCAGAAGCGTCATGCAAGGTGCAGTTGGCTATACAGAATCTGGGAATGCAGATTGACCGTACGAAACTTCTAGAGGCAGAGGATAAATTAGAGCAGCTTCTAGCAGAAGAGGAAGTTTTCTGGAAACAAAGATCAAGAGAACAATGGCTAGTCGATGGAGACCGAAACACACGTTGGTTTCACTCACGGGCCAGCTACAGATAGTAGAAAAATCAAATTTGTGGTCTGCAGGACTATCTGAGGAATTGGCAAACGGACCAAGATCAAGTTGAATCCATGATTACTGAGTATTTCTCAACCTTGTTTGGTTCCTCTTTGCCCGCAGATCCTGTTATTCAAGAGGCTATCCATTTTGTCAGACCGACTGTGACAGAGGACATGAACTGCCGTCTCCATCAACCTTTCACGGAGGCAGAGGTGTATACGACGGTCAAGCAAATTCATCCTCATAAAGCGCCAGGACCGGATGGCTTATCAGGGGCCTTTTATCACCAATTTTGGCCAATTGTGGGTGTCGATGTAACTAAGGTTTGCTTGGATGTTCTTAATCATCGAGTTTCATCAGCTGCTTTAAATGAAACAATGATTGTTCTTATACCAAAAGTGGGTTCTCCTACGCGTGTTACAGAGTTCCGACCGATATCCTTATTCAATGTCACTTACTAGATCATCTCCAAGGTAATAGTTAATAGGATGAAGAAAGTACTGAATGCCCTCATCTCTCCAAACCAGAGCGCCTTTATCCCAGGGCGGTGTGTTGTGGATAATGCTATTCTTGGATATGAGTGTATCCATTCGCTAAAAAACAGACGATAAGTTAAGACGGGTCGGGCGACACTAAAAATTTACATGAGCAAGGCGTATGACCACGTGGAGTGGTCTTTTCTGAAGTTCATCATGCTAAAATTGGGCTTTGAGAATCATTGGGTCGACTTCATTGACATGTGCATTTCAACGGTCACCTTTTCGTTCAATCTTAACGGAGTAAGGCGGGGCCACATCGTTCCTAGTAGAGGTCTTCGACAAGGCGACCCATTATCGCCCTACTTGTTTCTGTTGTGTGCTGAGGGCTTATCTAGTTTACTGCATGGGGCGATGGCATAGAGGGTTATATCTGGTCTGAAAATTGCAAGACATAGTCCACCGATTTCGCACTTGTTTTTCGCTAATGATAGCCTCATGTTTTTTAAAGCCAAACAGAACGAAGCACTGGTCGTCCGATCTATGCTTGACTTATATGCCCAAGCCTCCGGACAGCTGATCAACTTTGAGAATTCCGCTCTTTCCTTGAGCCCGAACACCGACCAACAAAGGCGACATGATCTAGGGAATGCTTTTGGCGTTCCACTTGTTCAGTGCCATAAATAGTACCTAGGCCTTCCTGCTTTTATGCCCAAATCAAAAAAATCTACTCTGAATTTCCTTAAAAGACCGCATTTGGAAGCATTTACAAGGTTGGAAGGGGAGACTATTCTCAGTTGGCGGAAAGGAAGTCTTGATTAAAGCTGTTATCCAGTCTATTCCTTGTTATACCATGAACTGCTTCCGGTTACCAAAGGGATTGATTCAGGATATTCACCAAATTATGACCTGATTTTGGTGGAATGGGGCAGGGATAGAGTGGCACATTCATTGGATTCGGTGGCAGCGAATTTGCCACCCTAAATGCATGGGTGGTTTGGGCTTTAGGAATCTTGAGATGTTTAACCAAGCACTGTTGGCCAAGCAATGCTGGCGCATTTTAAATGAGCCCACATCTCTCCTCTCACGTGTGTTAAAAGGGCATTACATTCCAACCACCGAATTTCTACAAGGCACTTTGGGCTTGAAGCCATCTTTTATCTGGTGATCACTACTATGGGGACAAGATCTTTTGGCGAAAGGGTTACGCTGGTGGGTACGGGTTCAACCATTCGAGTCTATGAGGATAATTGGATTCCCAGGAATAGTGTCCTTACGGTCCAAACCCGAGAGTGGCATCCAGATATCTAGCATGTAAGTGACTTACTAACAGCTAATGGTGAGTGGAACTTTGATCTCCTACAGCAGGCTTTCGATCACGAAGAGGCCAAAATCATATCCGCGATCCCCTTGAACCATGGATTTCTGGCGGACCGACAGGTATGGCACTATGAGAAAAGTGGCATATACACAGTTAAAAGCGGATATCGAGTAGCTCAAAGTGCTGAATTTTCCCAAATACCATCCTCCTCTTCCTTGGATTCAAAACTTGCATGGTGGAATTGTGTATGGCATCTACGACTACCATCCAAAATTAAAATCTTTCTATGGAGGCTCTGTCTGGATATACTACCGACACGGGAAAACTTGATTCAGAGAGGTATGGATATTCCCAATTTGTGTGTTGTTTGTGGTAAGTGGGGGAGAGTAGCCTCCATGTGTTATGGCAATGCAAAAAGGTACGAACCCTCTGGCTGCGATCAAAGTTTTGGTAGTTGTGGCAACCCCATGGATTTGTGTCTATGTTTGAGCTATTGAGGCATATCCAAGGATCCCTTGGAAAGGATAGCTTTGAGACTGTGATTGTGATAATATGGGGGATATGGTCAAACCAAAATAGAATTCTGGTGGGAAAATCATTGGTTCTTGAGGACCTATTGGATTGGGCGGAGACATATATCCATACCTACCGAGCGGCACACCAGTCCGGACAGTTGGGGACTTCTGATAACGTTTCGCAAGATTTGGTACGTTGGACCCCTCCGATAGAAGGGAGAGTCAAGTTGAATACAAATGCCTCTTTCTTTCCAAGCACTGGTATGGCAGGTGCAGGTATGGTGATTCGAAACAGCAGAGGCGAAGTACTACTGACGAGGACTATTCCTTTAGTAGCGATATAGTAGAAGGCTAGGCGGTGGCAGTAGGAATAAAGCATGCCTTAGACTTGGATTTCTGTCACTTGAATGTGGAGGTGGACTCCATGAGGATCTATCGCCTTTTGCAGAGGGAAACGGATGACATATCAGAACTAGGGGCTTGATAACTGTTTTGCCCCAACGTGACGTTATGGGAAATGACATAAGGTATAGCTTCACGCCGAGGGATGGAAATAAGGTTGCACATGGTCTCGCACACCTGGCTCTAAATTGGCATGAGGAGTGCCTGTGGATTGAAGACTGGCCGTTTGAGATATCTGATCTTTTAGATCAGGATACTGCTCTTTGA

mRNA sequence

ATGAATCGTGTTTTCCGTTCCGGACCCTGGACTTTCGATAAGAGTCTGGTGGTGCTGGTAGTACCTACGGATGTTGATGATCCAATGAGTTTATCGTTCACCACTACCTCGTTCTGGGTTCAAATTCAAAGAGTTCCGTTCAAGTTTTTGACTAGGGACATGGCAATAAAGCTCGAGCAGTACATTGGGCGAGTGGAAGAGCGAGAATGTCCTTTGGTGTCCTTTGAACGTCGTCCTGATAAGCTGGAATATGGGGCATGGCTTCGGGCGGACTTTGTCCCTTCGACAGTGATCCAGGAAAACCTTGAGAAGAATACCCCTCATACGGAAGTAAATGATGCAGCTGACGACACTGACTTATCAACTTTGACGAGTGTAGGAGAGGATACGGCAGCGGTGACTACTGCCCAACCGCCAACGAGATCACAAGGCAACGAACCGCCTAAAACTGGGGAACAAGAGCCTACTTCTACGCCTAATCTGACGACTGCTATACCTAAGTCTTCGAACATAGTGGTTGAGAATTTACAAAAGAAAAAAGGTAAAAGAATATTGGGTTTTGGATCAGAAATCAACACTGACGTGGGTCAGGAAGCAACAGGACCTGAGATGACTGCCTCTACCGTAATGTCGATGGTGGTTGGGTCTAAGCGAAAAGAGGGATGGAAACGTAAGGCTCGTAATGTTGCAAGTGACAATGAGCCAATGGACTACTACCACCCAGTATTAACTCGCAAACGACGCCATCAAGATCCTGAGAGCTCCTCTCTTGATGGTGCTCAGAAGAAACTTAAAGATGTGGTGTTCAGCCTGATATCTTTCTCTAATCATCATATTGATGGGTGGATAGAGTGGGACCAGAAACGTTGGCGGATCACTGGGTTTTATGGCTTCTTTGAATCTGATGCTCACCACCGTTCGTGGAACCTCCTTCGCAAATTGCGGGGCTCTTCGGACACACCTTGGTTGGTGGGTGGCGATTTTAATGCGATCCTTCAACATGCGGAGAAATTTGGCAGGCGTATGACTGTGGAAAACGAGTTGGATGCCTTCCGATTGGCACTGGAGGATTGCTCGCTATCTGATATGGGTTTATCGGGGGACATATATACGTGGTCTAATCGACGGCCAGGGGCGAAACTCATTTCTGAACGCCTTGATCGTGTGGTATGTACAAATACCTGGCGTTTGTTATTCCCGCAGAGTGAGATTATTCACTTGGACTACCATGGATTTGACCATCGACCAGTGGGTCTACTATTATATCCCACGTCACCACTACTTCGACCATTCGGGAAGCGACTCTCCCGTTTTGAAGATGTATGGATGCGATACCCGCACTGTTCGCAGATAGTGGAGTCAGGTTGGAATTCAGTGTCTGGCTGGCTTGATCCATATCAGCTTGTACAGAAGACGGGTGTTTGTATGAAAGAGCAAAGTGTTTGGGGAAAGTCAAAAAAGGGCAACTATGGGCACCGTATAGCAGAAGCGTCATGCAAGGTGCAGTTGGCTATACAGAATCTGGGAATGCAGATTGACCGTACGAAACTTCTAGAGGCAGAGGATAAATTAGAGCAGCTTCTAGCAGAAGAGGAAGTTTTCTGGAAACAAAGATCAAGAGAACAATGGCTAGTCGATGGAGACCGAAACACACATCCTGTTATTCAAGAGGCTATCCATTTTGTCAGACCGACTGTGACAGAGGACATGAACTGCCGTCTCCATCAACCTTTCACGGAGGCAGAGGTGTATACGACGGTCAAGCAAATTCATCCTCATAAAGCGCCAGGACCGGATGGCTTATCAGGGGCCTTTTATCACCAATTTTGGCCAATTGTGGGTGTCGATGTAACTAAGGTTTGCTTGGATGTTCTTAATCATCGAGTTTCATCAGCTGCTTTAAATGAAACAATGATTGTTCTTATACCAAAACAGGCTTTCGATCACGAAGAGGCCAAAATCATATCCGCGATCCCCTTGAACCATGGATTTCTGGCGGACCGACAGGTATGGCACTATGAGAAAAGTGGCATATACACAGTTAAAAGCGGATATCGAGTAGCTCAAAGTGCTGAATTTTCCCAAATACCATCCTCCTCTTCCTTGGATTCAAAACTTGCATGGTGGAATTGTGTATGGCATCTACGACTACCATCCAAAATTAAAATCTTTCTATGGAGGCTCTGTCTGGATATACTACCGACACGGGAAAACTTGATTCAGAGAGGTATGGATATTCCCAATTTGTGTGTTGTTTGTGGTAAGTGGGGGAGAGTAGCCTCCATGTGTTATGGCAATGCAAAAAGATTTGGTACGTTGGACCCCTCCGATAGAAGGGAGAGTCAAGTTGAATACAAATGCCTCTTTCTTTCCAAGCACTGGTATGGCAGGTGCAGAACTAGGGGCTTGATAACTGTTTTGCCCCAACGTGACGTTATGGGAAATGACATAAGGTATAGCTTCACGCCGAGGGATGGAAATAAGGTTGCACATGGTCTCGCACACCTGGCTCTAAATTGGCATGAGGAGTGCCTGTGGATTGAAGACTGGCCGTTTGAGATATCTGATCTTTTAGATCAGGATACTGCTCTTTGA

Coding sequence (CDS)

ATGAATCGTGTTTTCCGTTCCGGACCCTGGACTTTCGATAAGAGTCTGGTGGTGCTGGTAGTACCTACGGATGTTGATGATCCAATGAGTTTATCGTTCACCACTACCTCGTTCTGGGTTCAAATTCAAAGAGTTCCGTTCAAGTTTTTGACTAGGGACATGGCAATAAAGCTCGAGCAGTACATTGGGCGAGTGGAAGAGCGAGAATGTCCTTTGGTGTCCTTTGAACGTCGTCCTGATAAGCTGGAATATGGGGCATGGCTTCGGGCGGACTTTGTCCCTTCGACAGTGATCCAGGAAAACCTTGAGAAGAATACCCCTCATACGGAAGTAAATGATGCAGCTGACGACACTGACTTATCAACTTTGACGAGTGTAGGAGAGGATACGGCAGCGGTGACTACTGCCCAACCGCCAACGAGATCACAAGGCAACGAACCGCCTAAAACTGGGGAACAAGAGCCTACTTCTACGCCTAATCTGACGACTGCTATACCTAAGTCTTCGAACATAGTGGTTGAGAATTTACAAAAGAAAAAAGGTAAAAGAATATTGGGTTTTGGATCAGAAATCAACACTGACGTGGGTCAGGAAGCAACAGGACCTGAGATGACTGCCTCTACCGTAATGTCGATGGTGGTTGGGTCTAAGCGAAAAGAGGGATGGAAACGTAAGGCTCGTAATGTTGCAAGTGACAATGAGCCAATGGACTACTACCACCCAGTATTAACTCGCAAACGACGCCATCAAGATCCTGAGAGCTCCTCTCTTGATGGTGCTCAGAAGAAACTTAAAGATGTGGTGTTCAGCCTGATATCTTTCTCTAATCATCATATTGATGGGTGGATAGAGTGGGACCAGAAACGTTGGCGGATCACTGGGTTTTATGGCTTCTTTGAATCTGATGCTCACCACCGTTCGTGGAACCTCCTTCGCAAATTGCGGGGCTCTTCGGACACACCTTGGTTGGTGGGTGGCGATTTTAATGCGATCCTTCAACATGCGGAGAAATTTGGCAGGCGTATGACTGTGGAAAACGAGTTGGATGCCTTCCGATTGGCACTGGAGGATTGCTCGCTATCTGATATGGGTTTATCGGGGGACATATATACGTGGTCTAATCGACGGCCAGGGGCGAAACTCATTTCTGAACGCCTTGATCGTGTGGTATGTACAAATACCTGGCGTTTGTTATTCCCGCAGAGTGAGATTATTCACTTGGACTACCATGGATTTGACCATCGACCAGTGGGTCTACTATTATATCCCACGTCACCACTACTTCGACCATTCGGGAAGCGACTCTCCCGTTTTGAAGATGTATGGATGCGATACCCGCACTGTTCGCAGATAGTGGAGTCAGGTTGGAATTCAGTGTCTGGCTGGCTTGATCCATATCAGCTTGTACAGAAGACGGGTGTTTGTATGAAAGAGCAAAGTGTTTGGGGAAAGTCAAAAAAGGGCAACTATGGGCACCGTATAGCAGAAGCGTCATGCAAGGTGCAGTTGGCTATACAGAATCTGGGAATGCAGATTGACCGTACGAAACTTCTAGAGGCAGAGGATAAATTAGAGCAGCTTCTAGCAGAAGAGGAAGTTTTCTGGAAACAAAGATCAAGAGAACAATGGCTAGTCGATGGAGACCGAAACACACATCCTGTTATTCAAGAGGCTATCCATTTTGTCAGACCGACTGTGACAGAGGACATGAACTGCCGTCTCCATCAACCTTTCACGGAGGCAGAGGTGTATACGACGGTCAAGCAAATTCATCCTCATAAAGCGCCAGGACCGGATGGCTTATCAGGGGCCTTTTATCACCAATTTTGGCCAATTGTGGGTGTCGATGTAACTAAGGTTTGCTTGGATGTTCTTAATCATCGAGTTTCATCAGCTGCTTTAAATGAAACAATGATTGTTCTTATACCAAAACAGGCTTTCGATCACGAAGAGGCCAAAATCATATCCGCGATCCCCTTGAACCATGGATTTCTGGCGGACCGACAGGTATGGCACTATGAGAAAAGTGGCATATACACAGTTAAAAGCGGATATCGAGTAGCTCAAAGTGCTGAATTTTCCCAAATACCATCCTCCTCTTCCTTGGATTCAAAACTTGCATGGTGGAATTGTGTATGGCATCTACGACTACCATCCAAAATTAAAATCTTTCTATGGAGGCTCTGTCTGGATATACTACCGACACGGGAAAACTTGATTCAGAGAGGTATGGATATTCCCAATTTGTGTGTTGTTTGTGGTAAGTGGGGGAGAGTAGCCTCCATGTGTTATGGCAATGCAAAAAGATTTGGTACGTTGGACCCCTCCGATAGAAGGGAGAGTCAAGTTGAATACAAATGCCTCTTTCTTTCCAAGCACTGGTATGGCAGGTGCAGAACTAGGGGCTTGATAACTGTTTTGCCCCAACGTGACGTTATGGGAAATGACATAAGGTATAGCTTCACGCCGAGGGATGGAAATAAGGTTGCACATGGTCTCGCACACCTGGCTCTAAATTGGCATGAGGAGTGCCTGTGGATTGAAGACTGGCCGTTTGAGATATCTGATCTTTTAGATCAGGATACTGCTCTTTGA

Protein sequence

MNRVFRSGPWTFDKSLVVLVVPTDVDDPMSLSFTTTSFWVQIQRVPFKFLTRDMAIKLEQYIGRVEERECPLVSFERRPDKLEYGAWLRADFVPSTVIQENLEKNTPHTEVNDAADDTDLSTLTSVGEDTAAVTTAQPPTRSQGNEPPKTGEQEPTSTPNLTTAIPKSSNIVVENLQKKKGKRILGFGSEINTDVGQEATGPEMTASTVMSMVVGSKRKEGWKRKARNVASDNEPMDYYHPVLTRKRRHQDPESSSLDGAQKKLKDVVFSLISFSNHHIDGWIEWDQKRWRITGFYGFFESDAHHRSWNLLRKLRGSSDTPWLVGGDFNAILQHAEKFGRRMTVENELDAFRLALEDCSLSDMGLSGDIYTWSNRRPGAKLISERLDRVVCTNTWRLLFPQSEIIHLDYHGFDHRPVGLLLYPTSPLLRPFGKRLSRFEDVWMRYPHCSQIVESGWNSVSGWLDPYQLVQKTGVCMKEQSVWGKSKKGNYGHRIAEASCKVQLAIQNLGMQIDRTKLLEAEDKLEQLLAEEEVFWKQRSREQWLVDGDRNTHPVIQEAIHFVRPTVTEDMNCRLHQPFTEAEVYTTVKQIHPHKAPGPDGLSGAFYHQFWPIVGVDVTKVCLDVLNHRVSSAALNETMIVLIPKQAFDHEEAKIISAIPLNHGFLADRQVWHYEKSGIYTVKSGYRVAQSAEFSQIPSSSSLDSKLAWWNCVWHLRLPSKIKIFLWRLCLDILPTRENLIQRGMDIPNLCVVCGKWGRVASMCYGNAKRFGTLDPSDRRESQVEYKCLFLSKHWYGRCRTRGLITVLPQRDVMGNDIRYSFTPRDGNKVAHGLAHLALNWHEECLWIEDWPFEISDLLDQDTAL
Homology
BLAST of Lcy01g008540 vs. ExPASy Swiss-Prot
Match: P0C2F6 (Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1g65750 PE=3 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 6.1e-06
Identity = 30/98 (30.61%), Postives = 52/98 (53.06%), Query Frame = 0

Query: 667 DRQVWHYEKSGIYTVKSGYRVAQSAEFSQIPSSSSLDSKLAWWNCVWHLRLPSKIKIFLW 726
           DR  W + + G ++V+S Y +    E  + P+ +S      ++NC+W +R+P ++K FLW
Sbjct: 253 DRLSWKFSQDGQFSVRSAYEMLTVDEVPR-PNMAS------FFNCLWKVRVPERVKTFLW 312

Query: 727 RLCLDILPTRENLIQRGMDIPNLCVVCGKWGRVASMCY 765
            +    + T E   +R +   N+C VC   G V SM +
Sbjct: 313 LVGNQAVMTEEERHRRHLSASNVCQVCK--GGVESMLH 341

BLAST of Lcy01g008540 vs. ExPASy TrEMBL
Match: A0A2N9IYC8 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS57142 PE=4 SV=1)

HSP 1 Score: 271.6 bits (693), Expect = 1.2e-68
Identity = 156/413 (37.77%), Postives = 211/413 (51.09%), Query Frame = 0

Query: 265 KDVVFSLISFSNHHIDGWIEWDQ-KRWRITGFYGFFESDAHHRSWNLLRKLRGSSDTPWL 324
           K+V   + SFS+ HID  +  +Q   WR TGFYG  E+     SWNLL++L      PW 
Sbjct: 523 KEVKLRVYSFSHSHIDAVVNENQPDAWRFTGFYGAPETHNREESWNLLQRLNAQFKLPWC 582

Query: 325 VGGDFNAILQHAEKFGRRMTVENELDAFRLALEDCSLSDMGLSGDIYTWSNRRPGAKLIS 384
             GDFN +++  EK GR    E ++  FR  L++CS  D+G +G  +TW+N RP A +  
Sbjct: 583 CMGDFNELVRIEEKQGRHARSERQMQLFRDVLDECSFMDLGFTGPRFTWTNNRP-ADMTW 642

Query: 385 ERLDRVVCTNTWRLLFPQSEIIHLDYHGFDHRPVGLLLYPT-SPLLRPFGKRLSRFEDVW 444
           ERLDRVV T  W L FP +++ HL+    DH+P+ +   PT  P  +PF     RFE+VW
Sbjct: 643 ERLDRVVATPDWLLQFPSAQVHHLEGRWSDHKPIWMNTEPTFIPSKKPF-----RFEEVW 702

Query: 445 MRYPHCSQIVESGWNSVSGWLDPYQLVQKTGVCMKEQSVWGKSKKGNYGHRIAEASCKVQ 504
                C  +++  W   S  +  Y + QK   C +  S W ++  GN   RI E    ++
Sbjct: 703 TSDQGCEAVIKDSWKKDSAGVPMYNVWQKIHACRRGLSSWSRTSFGNVKFRIREVERLLK 762

Query: 505 LA--IQNLGMQIDRTKLLEAEDKLEQLLAEEEVFWKQRSREQWLVDGDRNT--------- 564
            A  I   G    R  LL  E  L  LLA+EE  W+QRSRE WL  GDRNT         
Sbjct: 763 QAEEISMQGRDHHRVSLLRQE--LHSLLAKEERLWRQRSRENWLQAGDRNTRYFHCRATQ 822

Query: 565 --------------------HPVIQEAIHFVRPTVTEDMNCRLHQPFTEAEVYTTVKQIH 624
                               +  I+E +  ++  VTE+MN +L + FT  EV   +KQ+ 
Sbjct: 823 RQRRNRVTRLRSSDGQWTSNYNQIEEVLENIQRVVTEEMNNQLIKEFTAEEVDVALKQMA 882

Query: 625 PHKAPGPDGLSGAFYHQFWPIVGVDVTKVCLDVLNHRVSSAALNETMIVLIPK 645
           P KAPGPD L   FY Q+W ++G DVT   L  LN      A+N T I LIPK
Sbjct: 883 PLKAPGPDDLPPIFYQQYWHLIGKDVTTAVLTCLNSGKILKAINHTYITLIPK 927

BLAST of Lcy01g008540 vs. ExPASy TrEMBL
Match: A0A2N9J4C9 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS59073 PE=4 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 4.6e-65
Identity = 147/430 (34.19%), Postives = 208/430 (48.37%), Query Frame = 0

Query: 265 KDVVFSLISFSNHHIDGWI-EWDQKRWRITGFYGFFESDAHHRSWNLLRKLRGSSDTPWL 324
           K+V   + SFS  HID  I E  Q  WR+TGFYG  E+     SW LLR+L      PW 
Sbjct: 548 KEVNLRVHSFSPSHIDSIINEHQQDTWRLTGFYGAPETRNREDSWALLRRLSSQHSIPWC 607

Query: 325 VGGDFNAILQHAEKFGRRMTVENELDAFRLALEDCSLSDMGLSGDIYTWSNRRPGAKLIS 384
             GDFN +++  EK GR    + ++  FR  L+DC   D+G +G  +TW+N R G  +  
Sbjct: 608 CLGDFNELVRLEEKQGRHCRSDRQMQLFRDVLDDCGFIDLGFTGPPFTWTNNRSG-DMTW 667

Query: 385 ERLDRVVCTNTWRLLFPQSEIIHLDYHGFDHRPVGLLLYPTSPLLRPFGKRLSRFEDVWM 444
           ERLDR V T  W  LFP + + HLD    DH+P+ +    T  ++ PF K   RFE+VW 
Sbjct: 668 ERLDRAVATTDWVTLFPSARVHHLDCRWSDHKPIWV---GTEKMVTPFRKPF-RFEEVWT 727

Query: 445 RYPHCSQIVESGWNSVSGWLDPYQLVQKTGVCMKEQSVWGKSKKGNYGHRIAEASCKVQL 504
               C++ +E+ W      +  Y + +K   C +    W K   G+   +I E   +++ 
Sbjct: 728 SDLGCAETIEASWRKPKTGVPMYSVWEKIQECRRGLKQWSKQSFGSIKQQICETEDQLKA 787

Query: 505 AIQNLGMQIDRTKLLEAEDKLEQLLAEEEVFWKQRSREQWLVDGDRNTHPVIQEAIH--- 564
           A     M  D  +++  ++KL  LLA++E  W+QRSR +WL +GD+NT     +A H   
Sbjct: 788 AEAKSMMGRDHVQVITLKNKLHTLLAKDERMWRQRSRVEWLREGDQNTRYFHSKATHRRR 847

Query: 565 ----------------------------------------------FVRPTVTEDMNCRL 624
                                                          + P VT++MN  L
Sbjct: 848 RNHVYRLRDNSGIWTSTQDQVPPLFINYYNSLFTTANPAHIEKVADCIAPVVTDEMNSSL 907

Query: 625 HQPFTEAEVYTTVKQIHPHKAPGPDGLSGAFYHQFWPIVGVDVTKVCLDVLNHRVSSAAL 645
            + FT  EV   +KQ+ P KAPGPDGL   FY ++W ++G DVTK  L  LN      A+
Sbjct: 908 SREFTSDEVIRALKQMAPLKAPGPDGLPPVFYQKYWHLIGADVTKAVLTCLNTGKILKAI 967

BLAST of Lcy01g008540 vs. ExPASy TrEMBL
Match: A0A2N9J4C9 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS59073 PE=4 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 2.2e-06
Identity = 33/103 (32.04%), Postives = 49/103 (47.57%), Query Frame = 0

Query: 651  EAKIISAIPLNHGFLADRQVWHYEKSGIYTVKSGYRVAQSAEFSQIPSSSSLDSKLAWWN 710
            ++ +  A P     L  RQ     + G+Y+V+SGY     A +   P  S        W+
Sbjct: 1433 QSPLTYAFPSVPRMLVTRQFGVAPEDGVYSVRSGYHSLLEASYRDNPGPSDTSFAAQVWH 1492

Query: 711  CVWHLRLPSKIKIFLWRLCLDILPTRENLIQRGMDIPNLCVVC 754
              W L++P+K++ FLWR C + LPTR NL  R +     C  C
Sbjct: 1493 TTWSLKVPAKVRHFLWRACHESLPTRLNLHHRHVLPDPRCESC 1535


HSP 2 Score: 259.6 bits (662), Expect = 4.6e-65
Identity = 147/430 (34.19%), Postives = 208/430 (48.37%), Query Frame = 0

Query: 265 KDVVFSLISFSNHHIDGWI-EWDQKRWRITGFYGFFESDAHHRSWNLLRKLRGSSDTPWL 324
           K+V   + SFS  HID  I E  Q  WR+TGFYG  E+     SW LLR+L      PW 
Sbjct: 548 KEVNLRVHSFSPSHIDSIINEHQQDTWRLTGFYGAPETRNREDSWALLRRLSSQHSIPWC 607

Query: 325 VGGDFNAILQHAEKFGRRMTVENELDAFRLALEDCSLSDMGLSGDIYTWSNRRPGAKLIS 384
             GDFN +++  EK GR    + ++  FR  L+DC   D+G +G  +TW+N R G  +  
Sbjct: 608 CLGDFNELVRLEEKQGRHCRSDRQMQLFRDVLDDCGFIDLGFTGPPFTWTNNRSG-DMTW 667

Query: 385 ERLDRVVCTNTWRLLFPQSEIIHLDYHGFDHRPVGLLLYPTSPLLRPFGKRLSRFEDVWM 444
           ERLDR V T  W  LFP + + HLD    DH+P+ +    T  ++ PF K   RFE+VW 
Sbjct: 668 ERLDRAVATTDWVTLFPSARVHHLDCRWSDHKPIWV---GTEKMVTPFRKPF-RFEEVWT 727

Query: 445 RYPHCSQIVESGWNSVSGWLDPYQLVQKTGVCMKEQSVWGKSKKGNYGHRIAEASCKVQL 504
               C++ +E+ W      +  Y + +K   C +    W K   G+   +I E   +++ 
Sbjct: 728 SDLGCAETIEASWRKPKTGVPMYSVWEKIQECRRGLKQWSKQSFGSIKQQICETEDQLKA 787

Query: 505 AIQNLGMQIDRTKLLEAEDKLEQLLAEEEVFWKQRSREQWLVDGDRNTHPVIQEAIH--- 564
           A     M  D  +++  ++KL  LLA++E  W+QRSR +WL +GD+NT     +A H   
Sbjct: 788 AEAKSMMGRDHVQVITLKNKLHTLLAKDERMWRQRSRVEWLREGDQNTRYFHSKATHRRR 847

Query: 565 ----------------------------------------------FVRPTVTEDMNCRL 624
                                                          + P VT++MN  L
Sbjct: 848 RNHVYRLRDNSGIWTSTQDQVPPLFINYYNSLFTTANPAHIEKVADCIAPVVTDEMNSSL 907

Query: 625 HQPFTEAEVYTTVKQIHPHKAPGPDGLSGAFYHQFWPIVGVDVTKVCLDVLNHRVSSAAL 645
            + FT  EV   +KQ+ P KAPGPDGL   FY ++W ++G DVTK  L  LN      A+
Sbjct: 908 SREFTSDEVIRALKQMAPLKAPGPDGLPPVFYQKYWHLIGADVTKAVLTCLNTGKILKAI 967

BLAST of Lcy01g008540 vs. ExPASy TrEMBL
Match: A0A2N9J809 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS60637 PE=4 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 1.6e-09
Identity = 37/103 (35.92%), Postives = 53/103 (51.46%), Query Frame = 0

Query: 651  EAKIISAIPLNHGFLADRQVWHYEKSGIYTVKSGYRVAQSAEFSQIPSSSSLDSKLAWWN 710
            EA+ I  IPL+    +D  VW   + G+Y+V+SGY     A +   P  S        W+
Sbjct: 1463 EAEAILGIPLSSTNASDTAVWGGTQDGVYSVRSGYHSLLEASYRDNPGPSDTSFAAQVWH 1522

Query: 711  CVWHLRLPSKIKIFLWRLCLDILPTRENLIQRGMDIPNLCVVC 754
              W L++P+K++ FLWR C + LPTR NL  R +     C  C
Sbjct: 1523 TTWSLKVPAKVRHFLWRACHESLPTRLNLHHRHVLPDPRCESC 1565


HSP 2 Score: 257.3 bits (656), Expect = 2.3e-64
Identity = 201/767 (26.21%), Postives = 324/767 (42.24%), Query Frame = 0

Query: 3   RVFRSGPWTFDKSLVVLVVPTDVDDPMSLSFTTTSFWVQIQRVPFKFLTRDMAIKLEQYI 62
           RV    PW +DK LV+L    + +    + F  TSFWVQ+  +P + +  ++A  L   +
Sbjct: 70  RVMMGEPWAYDKHLVILKRIEEDEAIKEVEFRETSFWVQLHGLPVRRMNHEVANALGSSL 129

Query: 63  GRVE-------------------------------------------------------- 122
           G+++                                                        
Sbjct: 130 GKIDCVSEGEANAEGGMAMRIRVSMDVTKPLCRGRKTRIEKGREVWISFKYERLPNFCYW 189

Query: 123 -------ERECPLVSFER---RPDKLEYGAWLRADFV-PSTVIQENLE----------KN 182
                  +++CP     +   R ++ ++G WLRA    P   ++  +E          K 
Sbjct: 190 CGHVSHSDKDCPYWLQNKDSLRLEEQQFGPWLRASTERPWRKMEVKVEGIVCPPPSKHKT 249

Query: 183 TPHTEVNDAADDTDLSTLTSVGEDTAAVTTAQPPTRSQ--GNEPPKTGEQEPTSTPNLTT 242
            PHT+             T+    T+ +    PP         PP+T    P  +     
Sbjct: 250 PPHTQPRSHTRPPP----TTSTPYTSPIIPPSPPNNHNPLSPTPPQTTNDTPPCSIPPPI 309

Query: 243 AIPKSSNIVVENLQKKKGKRILGFGSEINTDVGQEATGPEMTASTVMSMVVGSKRKEGWK 302
            +P+++   V                +  TD+  E    E   ST  S+   +++++ ++
Sbjct: 310 PVPETTQTPVP--------------VDFMTDMEVE----ENPVSTPFSLTKPNRKEDTFE 369

Query: 303 RKARNVASDNEPMDYYHPVLTRKRRHQDPESSS---------------------LDGAQK 362
            + R + S    ++Y            DPE+++                     L  ++ 
Sbjct: 370 SQLREIDS---AINYLQKEKECTLISPDPETNAKISLPPTNISGPNPNSGSHAILANSRN 429

Query: 363 K--------LKDVVFSLISFSNHHIDGWIEWDQKR-WRITGFYGFFESDAHHRSWNLLRK 422
           K         K++   + SFS  HID  I  +Q   WR+TGFYG  E+     SW+LLR+
Sbjct: 430 KGGGLCLFWKKEINLRVSSFSPSHIDAIINENQNNVWRLTGFYGAPETRNREESWDLLRR 489

Query: 423 LRGSSDTPWLVGGDFNAILQHAEKFGRRMTVENELDAFRLALEDCSLSDMGLSGDIYTWS 482
           L      PW   GDFN +++  EK G+    + ++  FR  L+DC   D+G  G  +TW+
Sbjct: 490 LNSQFKIPWCCLGDFNELVRIEEKQGKHFRSDRQMQLFRDVLDDCGFVDLGFIGPPFTWT 549

Query: 483 NRRPGAKLISERLDRVVCTNTWRLLFPQSEIIHLDYHGFDHRPVGLLLYPTSPLLRPFGK 542
           N R G  +  ERLDR V T  W   FP + + HLD+   DH+P+ +    T P+L P  +
Sbjct: 550 NNRIG-DMTWERLDRAVATPEWLTWFPLARVHHLDWRWSDHKPIWV---GTEPMLIP-SR 609

Query: 543 RLSRFEDVWMRYPHCSQIVESGWNSVSGWLDPYQLVQKTGVCMKEQSVWGKSKKGNYGHR 602
           +L RFE+VW     C + +E+ W      +  Y   +K   C ++   W ++  GN  ++
Sbjct: 610 KLFRFEEVWTTNISCEKTIEATWRDSKPGVPMYTAWEKIHACRRDLRKWSRNNFGNIQNQ 669

Query: 603 IAEASCKVQLAIQNLGMQ-IDRTKLLEAEDKLEQLLAEEEVFWKQRSREQWLVDGDRNTH 645
           I+E   +++ A + L MQ  D T++   + +L  L  + E  W+QRSR +WL +GD NT 
Sbjct: 670 ISETEKQLKTA-EALSMQGRDHTQVAILKRRLHDLWDKNERLWRQRSRVEWLKNGDLNTR 729

BLAST of Lcy01g008540 vs. ExPASy TrEMBL
Match: A0A2N9HG19 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS38757 PE=4 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 8.5e-11
Identity = 40/107 (37.38%), Postives = 56/107 (52.34%), Query Frame = 0

Query: 644  KQAFDHEEAKIISAIPLNHGFLADRQVWHYEKSGIYTVKSGYRVAQSAEFSQIPSSSSLD 703
            +  F   EA+II  I L+     D   W   K+G+Y V+SGY +  +    + P SS   
Sbjct: 1252 RTTFLPHEAEIILGISLSSSNRDDTATWGGTKNGVYAVRSGYHLLLNESHQEQPGSSDTS 1311

Query: 704  SKLAWWNCVWHLRLPSKIKIFLWRLCLDILPTRENLIQRGMDIPNLC 751
                 WN +W L++P KI+ FLWR C + LPTR+NL  R +    LC
Sbjct: 1312 LVTHIWNKIWSLQIPVKIRHFLWRACHESLPTRKNLHHRHVQDDPLC 1358


HSP 2 Score: 256.5 bits (654), Expect = 3.9e-64
Identity = 145/431 (33.64%), Postives = 209/431 (48.49%), Query Frame = 0

Query: 265 KDVVFSLISFSNHHIDGWIEWDQ-KRWRITGFYGFFESDAHHRSWNLLRKLRGSSDTPWL 324
           K++   + SFS+ HID  +  +Q   WR TGFYG  E+     SWNLLR+L      PW 
Sbjct: 489 KEIKLRVNSFSSSHIDAIVNENQTDMWRFTGFYGAPETHKREESWNLLRRLNAQMKVPWC 548

Query: 325 VGGDFNAILQHAEKFGRRMTVENELDAFRLALEDCSLSDMGLSGDIYTWSNRRPGAKLIS 384
             GDFN +++  EK GR    + ++  FR AL++C   D+G +G  +TWSN RP   +  
Sbjct: 549 CMGDFNELVRIEEKQGRHNRSDCQMQMFRDALDECGFVDLGFTGPKFTWSNNRP-RDMTW 608

Query: 385 ERLDRVVCTNTWRLLFPQSEIIHLDYHGFDHRPVGLLLYP-TSPLLRPFGKRLSRFEDVW 444
           ERLDRVV T  W L FP + + HLD    +H+P+ L   P   P  RPF     RFE+VW
Sbjct: 609 ERLDRVVATPDWLLRFPTARVYHLDGRWSNHKPIWLSSEPMIVPARRPF-----RFEEVW 668

Query: 445 MRYPHCSQIVESGWNSVSGWLDPYQLVQKTGVCMKEQSVWGKSKKGNYGHRIAEASCKVQ 504
                C  ++E+ W      +  Y + +K   C +    W +   GN   RI +   +++
Sbjct: 669 TSDQGCENVIETSWQKNVQGVPMYTVWEKIHACRRGLRSWSRHSFGNIKARIKKVEDQLK 728

Query: 505 LAIQNLGMQIDRTKLLEAEDKLEQLLAEEEVFWKQRSREQWLVDGDRNTH---------- 564
            A +     +D  ++ E + +L  LLA+EE  W+QRS+  WL   DRNT           
Sbjct: 729 EAKRASMQGLDHYRVSELKTELYSLLAKEEQLWRQRSQADWLRARDRNTRYFHCRATQRQ 788

Query: 565 ---------------------------------------PVIQEAIHFVRPTVTEDMNCR 624
                                                    ++E +  ++P V E+MN +
Sbjct: 789 RRNYVTRLKNQAGQWTTTHAQVPPLFIEYYTSLFQTVNPEQVEEVVEEIQPVVNEEMNSQ 848

Query: 625 LHQPFTEAEVYTTVKQIHPHKAPGPDGLSGAFYHQFWPIVGVDVTKVCLDVLNHRVSSAA 645
           L + FT  EV+T +KQ+ P KAPGPDGL   FY ++W ++G DVT   L  LN      A
Sbjct: 849 LIKEFTAEEVHTALKQMAPIKAPGPDGLPPIFYQKYWHLIGKDVTTAVLTCLNSGKILKA 908

BLAST of Lcy01g008540 vs. NCBI nr
Match: XP_012836341.1 (PREDICTED: uncharacterized protein LOC105956976 [Erythranthe guttata])

HSP 1 Score: 259.2 bits (661), Expect = 1.2e-64
Identity = 160/489 (32.72%), Postives = 232/489 (47.44%), Query Frame = 0

Query: 217 KRKEGWKRKARNVASDNEPMDYYHPVLTRKRRHQDPESSSLDGAQKK-------LKDVVF 276
           K+K+  K+KA  V           P++ + RR  D     +D   +         KDV  
Sbjct: 3   KKKKKKKKKATLVFLSETKATL--PLMEKLRRRWDLNGFGVDKIGRSGGMILFWRKDVEV 62

Query: 277 SLISFSNHHIDGWI--EWDQKRWRITGFYGFFESDAHHRSWNLLRKLRGSSDTPWLVGGD 336
            LIS+SN+HID  +       +WR+TGFYGF +    H SW+LLR LR     PW+VGGD
Sbjct: 63  DLISYSNNHIDAEVLDINHNSKWRVTGFYGFPDRTRRHASWSLLRSLRDQRSMPWVVGGD 122

Query: 337 FNAILQHAEKFGRRMTVENELDAFRLALEDCSLSDMGLSGDIYTWSNRRPGAKLISERLD 396
           FN IL ++EK G    +   ++AFR  L+ C LSD+G  G  +TWSN +   + + ERLD
Sbjct: 123 FNEILCNSEKEGGLPKLPAHIEAFRETLDVCDLSDLGFEGTQFTWSNNQAFPRTVRERLD 182

Query: 397 RVVCTNTWRLLFPQSEIIHLDYHGFDHRPVGLLLYPTSPLLRPFGKRLSRFEDVWMRYPH 456
           RV   N W + +P++++ HL+Y G DH P+ LLL P  P      KR  RFE VW+R   
Sbjct: 183 RVCANNEWTMRYPRAKVKHLEYPGSDHSPIQLLLDPPEPRYDHQKKRPFRFEAVWLRRDE 242

Query: 457 CSQIVESGWNSVSGWLDPYQ-LVQKTGVCMKEQSVWGKSKKGNYGHRIAEASCKVQLAIQ 516
           C  IV   ++ +    DP + +V+K   C      W K+       RI +   ++   + 
Sbjct: 243 CESIVHHQYSDIV-MADPVEAVVRKNEGCRLALIRWKKTFVLEPRRRIEKLRKRLHFLMG 302

Query: 517 NLGMQIDRTKLLEAEDKLEQLLAEEEVFWKQRSREQWLVDGDRNT--------------- 576
            L     + ++ + + ++E+   E +++W+QRS+ QW+ +GDRNT               
Sbjct: 303 ALQTLDTKREINQLKLEMEKAYEENDMYWRQRSKIQWIQEGDRNTKFFHAKATIRNRMNR 362

Query: 577 ------------------------------------HPVIQEAIHFVRPTVTEDMNCRLH 636
                                                  I E +  VR  ++ +    L 
Sbjct: 363 VDKLKDDGGIWRNSQRDIEKIISEYFEQLFSSTGPSEQEIDEVLVNVRNWISGEAAQLLS 422

Query: 637 QPFTEAEVYTTVKQIHPHKAPGPDGLSGAFYHQFWPIVGVDVTKVCLDVLNHRVSSAALN 645
            PFT  EV   + Q+ P K+PGPDGL   FY ++W I+G DV    LD LNH      LN
Sbjct: 423 MPFTADEVTRAISQMAPLKSPGPDGLPVIFYTKYWHILGSDVVTCVLDFLNHHNLPPTLN 482

BLAST of Lcy01g008540 vs. NCBI nr
Match: KAG2663507.1 (hypothetical protein I3760_16G033000 [Carya illinoinensis])

HSP 1 Score: 256.9 bits (655), Expect = 6.2e-64
Identity = 142/424 (33.49%), Postives = 216/424 (50.94%), Query Frame = 0

Query: 273 SFSNHHIDGWIEWDQKR---WRITGFYGFFESDAHHRSWNLLRKLRGSSDTPWLVGGDFN 332
           +FS  HI   +  +++    W +TGFYG  +    H SWNLLR L   SD  WL+ GDFN
Sbjct: 526 TFSKFHIHAKVTEEEENVEPWWLTGFYGNSDVSKRHESWNLLRTLLVPSDKGWLILGDFN 585

Query: 333 AILQHAEKFGRRMTVENELDAFRLALEDCSLSDMGLSGDIYTWSNRRPGAKLISERLDRV 392
            IL +AEK G R   E ++ AFR  +++C L D+G +G+ +TW NRR  A  ISERLDR 
Sbjct: 586 EILSNAEKSGGRDKSERQMKAFRDVIDECHLHDLGFNGNPFTWCNRRERAHCISERLDRF 645

Query: 393 VCTNTWRLLFPQSEIIHLDYHGFDHRPVGLLLYPTSPLLRPFGKRLSRFEDVWMRYPHCS 452
           +    W   +P + +IH      DH P+ L L  T+  ++   K+L RFE +W+    C 
Sbjct: 646 LSNLKWHSFYPMASVIHGVIAYSDHVPIMLKL--TAGSVQGPRKKLFRFEAMWVDATDCK 705

Query: 453 QIVESGWNSVSGWLDPYQLVQKTGVCMKEQSVWGKSKKGNYGHRIAEASCKVQLAIQNLG 512
           Q+++  W  V G  D   +++K   C ++ +VW K+  G+    + +A  ++ L  Q   
Sbjct: 706 QVIQDAWRGVEGRKDLSIVMRKIQHCGEKLTVWNKTNFGHVQRNLKKAKDRLCLVHQADP 765

Query: 513 MQIDRTKLLEAEDKLEQLLAEEEVFWKQRSREQWLVDGDRNT----HPVIQEA------- 572
           +  +R KL EA +++++ L   E+ WKQRS+  WL +GD+N+    H   Q         
Sbjct: 766 LSNNRQKLQEARNEVQKWLTRNEIMWKQRSKALWLAEGDKNSRYFHHKATQRRKKNWIKE 825

Query: 573 -------------------------------------IHFVRPTVTEDMNCRLHQPFTEA 632
                                                +  +   +T DM  +L  PF+E 
Sbjct: 826 VKDSNGVWQNNERRDEIILDYFNSLFKAADEVGSMGFLQGLAGRITPDMVEQLDSPFSED 885

Query: 633 EVYTTVKQIHPHKAPGPDGLSGAFYHQFWPIVGVDVTKVCLDVLNHRVSSAALNETMIVL 646
           EV   + ++HP KAPGPDG+S  FY ++W +VG DVT+  L  LN+    +A+N T + L
Sbjct: 886 EVKRALTEMHPTKAPGPDGMSPLFYQKYWSVVGKDVTESVLHALNNGCFPSAINHTYVTL 945

BLAST of Lcy01g008540 vs. NCBI nr
Match: XP_023920731.1 (uncharacterized protein LOC112032201 [Quercus suber])

HSP 1 Score: 253.4 bits (646), Expect = 6.8e-63
Identity = 140/422 (33.18%), Postives = 195/422 (46.21%), Query Frame = 0

Query: 273 SFSNHHIDGWIEWDQKR-WRITGFYGFFESDAHHRSWNLLRKLRGSSDTPWLVGGDFNAI 332
           +FS   ID ++       WR TGFYG  ++     +W LL+ L  S+  PWL  GDFN I
Sbjct: 82  NFSRWFIDAYVLCTTGHCWRFTGFYGHPDTSKRDETWALLQSLGRSNHLPWLCVGDFNEI 141

Query: 333 LQHAEKFGRRMTVENELDAFRLALEDCSLSDMGLSGDIYTWSNRRPGAKLISERLDRVVC 392
              AEK G  +    ++D FR  +  C+  D+G  G  +TWS   P    I  RLDR   
Sbjct: 142 TSQAEKVGGCLRPARQMDRFRSTIHMCNFIDLGYHGSPFTWSRNHPTEGRIYIRLDRAFA 201

Query: 393 TNTWRLLFPQSEIIHLDYHGFDHRPVGLLLYPTSPLLRPFGKRLSRFEDVWMRYPHCSQI 452
            N W+LLFP S + H+     DH  + + +    P  RP  + L RFE +W++ P C ++
Sbjct: 202 NNAWKLLFPGSTVHHIPMSSSDHSLLSIRMQQPGPPRRPRSRPLFRFEAMWLQDPRCEEV 261

Query: 453 VESGWNSVSGWLDPYQLVQKTGVCMKEQSVWGKSKKGNYGHRIAEASCKVQLAIQNLGMQ 512
           V+  W+          ++     C    S W K++ G+ G +I +  CK+Q  ++N  +Q
Sbjct: 262 VQEAWSEGLYKTTGVSIINCHASCSDRLSAWNKNEYGHVGKQIKKLECKLQF-LENHPIQ 321

Query: 513 IDRTKLLEAEDKLEQLLAEEEVFWKQRSREQWLVDGDRNT-------------------- 572
            +  ++ E    L + L  E   W QRSR  W+ DGDRNT                    
Sbjct: 322 -NSAEIHEVRTALNRWLDAENTMWHQRSRNLWITDGDRNTTFFHQKASNRKERNSILGIC 381

Query: 573 -----------------------------HPVIQEAIHFVRPTVTEDMNCRLHQPFTEAE 632
                                        H      I  V+P VTE+MN  L + FT  E
Sbjct: 382 DSAGQWQEDDHTTETIILEYFENIFRSNGHTDTSMLIDAVQPVVTEEMNTFLTRTFTADE 441

Query: 633 VYTTVKQIHPHKAPGPDGLSGAFYHQFWPIVGVDVTKVCLDVLNHRVSSAALNETMIVLI 645
           V+  +KQ+HP K+PGPDG+   FY  FW + G  VTK  LD LNH +     NET IVLI
Sbjct: 442 VHKALKQMHPKKSPGPDGMPPLFYQHFWSLTGECVTKTVLDFLNHGIIPPNFNETHIVLI 501

BLAST of Lcy01g008540 vs. NCBI nr
Match: XP_023920731.1 (uncharacterized protein LOC112032201 [Quercus suber])

HSP 1 Score: 86.3 bits (212), Expect = 1.4e-12
Identity = 46/125 (36.80%), Postives = 69/125 (55.20%), Query Frame = 0

Query: 630  SSAALNETMIVLIPKQAFDHEEAKIISAIPLNHGFLADRQVWHYEKSGIYTVKSGYRVAQ 689
            +S   NE++I     Q F  E+   I  IPL+     DR +W Y   G +TV S Y+VA 
Sbjct: 975  NSGEWNESLI----SQIFSPEDTACILGIPLSVHKPRDRIIWAYTPKGKFTVNSAYKVAM 1034

Query: 690  SAEFSQIPSSSSL-DSKLAWWNCVWHLRLPSKIKIFLWRLCLDILPTRENLIQRGMDIPN 749
            S     + + +S  + ++ +W  VW+LR+P+KIK+F WR C +ILPT+ NL  R +   +
Sbjct: 1035 SMTQGNLDAEASHGELQIRFWRQVWNLRIPNKIKLFTWRACKNILPTKANLYHRHVLDNS 1094

Query: 750  LCVVC 754
             C  C
Sbjct: 1095 TCEAC 1095


HSP 2 Score: 251.1 bits (640), Expect = 3.4e-62
Identity = 145/424 (34.20%), Postives = 218/424 (51.42%), Query Frame = 0

Query: 274 FSNHHIDGWIEW-DQKRWRITGFYGFFESDAHHRSWNLLRKLRGSSDTPWLVGGDFNAIL 333
           FS HHID  ++      WR+TG YG    D   R+W+L R L+  S  PW + GD N + 
Sbjct: 83  FSFHHIDATVQMVGLPPWRVTGIYGEPRRDFRFRTWDLFRSLKNDSHLPWCLLGDMNNLG 142

Query: 334 QHAEKFGRRMTVENELDAFRLALEDCSLSDMGLSGDIYTWSNRRPGAKLISERLDRVVCT 393
            HAEK G R   +  ++ F  AL+DC+L D+ L G  YTW   R   + I ERLD+ + T
Sbjct: 143 SHAEKKGGRKYPDRLIEGFTKALDDCNLMDLPLVGYPYTWEKGRNSNEWIEERLDKALVT 202

Query: 394 NTWRLLFPQSEIIHLDYHGFDHRPVGLLLYPTSPLLRPFGKRLSRFEDVWMRYPHCSQIV 453
           N+W  LFP S +++L++   DH P+ L+L   +PL+     R  RFE+ W+R P C Q+V
Sbjct: 203 NSWLSLFPHSSLLNLEFSTSDHCPLLLILKGNTPLV---SFRSFRFENAWIREPLCEQLV 262

Query: 454 ESGWNSVSGWLDPYQLVQKTGVCMKEQSVWGKSKKGNYGHRIAEASCKVQLAIQNLG--- 513
           ES W   SG +    + +K   C +    WG+   GN+  RI++  CK Q+     G   
Sbjct: 263 ESCWRG-SGLV---HIQEKIHHCGEVLGRWGRDITGNFRKRISD--CKSQIRNSKWGRDP 322

Query: 514 MQIDRTKLLEAEDKLEQLLAEEEVFWKQRSREQWLVDGDRNT---HPV------------ 573
             I + K  E ++KL ++LA++E+FWKQRS++ WL  GD+N+   H +            
Sbjct: 323 FSIQQHK--EGKEKLAEVLAQKEIFWKQRSKQFWLNSGDKNSKYFHSIANSRKRNNSLTR 382

Query: 574 ---------------------------------IQEAIHFVRPTVTEDMNCRLHQPFTEA 633
                                            +   +  ++P+V+ + N  L +  +E 
Sbjct: 383 LQDSNGGWVNWESGLANVITSYFHELFSTSSINMGSVLDGIQPSVSREQNDELLRTISEE 442

Query: 634 EVYTTVKQIHPHKAPGPDGLSGAFYHQFWPIVGVDVTKVCLDVLNHRVSSAALNETMIVL 646
           EV + + Q+HP K+PGPDG++ AFY ++W +VG DV K   D  +       LN+T IVL
Sbjct: 443 EVRSALFQMHPDKSPGPDGMTPAFYQKYWGVVGADVVKFVRDFFDSGQFPDTLNDTHIVL 495

BLAST of Lcy01g008540 vs. NCBI nr
Match: KAF7825238.1 (ribonuclease H [Senna tora])

HSP 1 Score: 246.9 bits (629), Expect = 6.4e-61
Identity = 170/577 (29.46%), Postives = 252/577 (43.67%), Query Frame = 0

Query: 265  KDVVFSLISFSNHHIDGWIEWDQK--RWRITGFYGFFESDAHHRSWNLLRKLRGSSDTPW 324
            ++V   L SFS +HID  I+ D +   WR TGFYGF +      SW LL+ L  +S+ PW
Sbjct: 500  QEVTIDLQSFSLNHIDVHIKDDSRDLTWRFTGFYGFPDEAYKKLSWKLLQDLNNASNLPW 559

Query: 325  LVGGDFNAILQHAEKFGRRMTVENELDAFRLALEDCSLSDMGLSGDIYTWSNRRPGAKLI 384
            L  GDFN I+  +EK G        +  FR AL+ C L D+G +G  YTWSN R G   I
Sbjct: 560  LCSGDFNEIILESEKKGGAPKNFRCMMEFREALDICGLQDIGFTGYPYTWSNGRCGEDNI 619

Query: 385  SERLDRVVCTNTWRLLFPQSEIIHLDYHGFDHRPVGLLLYPTSPLLRPFGKRLSRFEDVW 444
             ERLD+   +  W  LFP   + H       H  V +     +P      KRL RFE+ W
Sbjct: 620  QERLDQACASEEWLSLFPFVSVEHNTRSFSYHCAVVITFDDENPDANRKAKRLFRFEESW 679

Query: 445  MRYPHCSQIVESGWNSVSGWLDPYQLVQKTGVCMKEQSVWGKSKKGNYGHRIAEASCKVQ 504
                 C ++V+ GW + S  +D    ++K   C KE +       G+   +I      + 
Sbjct: 680  CNEDSCGELVDLGWEAGSDVVDK---IKKVASCFKEANF---HNTGSIRRKIKHLEESIT 739

Query: 505  LAIQNLGMQIDRTKLLEAEDKLEQLLAEEEVFWKQRSREQWLVDGDRNTH---------- 564
            +  Q       R  + +A+ +L+QLL  EE+ W+QRSR  WL +GD NT           
Sbjct: 740  ILKQIQLTDAVRKNIQDAQAELDQLLKNEEILWRQRSRAVWLKEGDLNTKFFHRKANQRR 799

Query: 565  ---------------------------------------PVIQEAIHFVRPTVTEDMNCR 624
                                                     +++    V+  ++ED    
Sbjct: 800  NRNAIRRIRDDQNRMHSDLAGITNTITSYFCNLFKASNLEGVEDVCKEVKRRISEDQCTL 859

Query: 625  LHQPFTEAEVYTTVKQIHPHKAPGPDGLSGAFYHQFWPIVGVDVTKVCLDVLNHRV---- 684
            L +P++  EV   +  +HP KAPGPD   G      W  + ++ +KV  +    RV    
Sbjct: 860  LSRPYSNEEVKAALDSMHPSKAPGPDAKLGYNPSFVWRGI-LNASKVIHEGATWRVGNGC 919

Query: 685  --------------------SSAALNETMIV--LIP-----------KQAFDHEEAKIIS 744
                                 S+A N  ++V  LI             + F   EAK+I 
Sbjct: 920  NINVWSDKWISSVRGSKVISKSSADNSNLMVSDLIHHDCRKWNLERIDELFLPFEAKMIK 979

Query: 745  AIPLNHGFLADRQVWHYEKSGIYTVKSGYRVAQSAEFSQIPSSSSLDSKLAWWNCVWHLR 754
            +IPL+   + DR +W  EK G Y+V+S Y    +++ +   SSS  DS+   W  +W L 
Sbjct: 980  SIPLSWRNVEDRLMWPLEKHGNYSVRSAYHFISNSKLTDSSSSSLHDSR---WGVLWGLS 1039

BLAST of Lcy01g008540 vs. TAIR 10
Match: AT1G40390.1 (DNAse I-like superfamily protein )

HSP 1 Score: 72.8 bits (177), Expect = 1.5e-12
Identity = 64/256 (25.00%), Postives = 115/256 (44.92%), Query Frame = 0

Query: 301 SDAHHRS-WNLLRKLRGSS---DTPWLVGGDFN---AILQHAEKFGRRMTVENELDAFRL 360
           ++A  RS W+ + +L  SS   ++PWLV GDFN   ++ +H       ++++  L+  + 
Sbjct: 97  TEAERRSLWDDITRLSASSPLCNSPWLVVGDFNQIASVTEHYSLMPSNISLQG-LEDLQA 156

Query: 361 ALEDCSLSDMGLSGDIYTWSNRRPGAKLISERLDRVVCTNTWRLLFPQSEIIHLDYHGFD 420
            + D  L D+   G +YTWSN +    ++  +LDR +    W   FP +  I       D
Sbjct: 157 CMRDSDLVDLPCRGVLYTWSNHQQDNPIL-RKLDRAIVNGCWLATFPTASAIFDPPSDSD 216

Query: 421 HRPVGLLLYPTSPLLRPFGKRLSRFEDVWMRYPHCSQIVESGWNSVSGWLDPYQLVQKTG 480
           H    ++L  + PL +   K+  ++      +P     + + W      +     +   G
Sbjct: 217 HAACMVILNNSPPLSK---KKSFKYFSFLSTHPDFISSILAAWQKE---IAVGSFMFSLG 276

Query: 481 VCMKEQSVWGKSKKGNYG-HRIAEASCKVQLAIQNLGMQIDRTKLLEAEDKLEQLLAEEE 540
             +KE      +KK   G +R   ++ + QL + N    + R + + A        A  E
Sbjct: 277 ELLKE------AKKACRGLNRRGFSNIQAQL-MSNPSDFLFRAEHV-ARKNWNFFAAALE 336

Query: 541 VFWKQRSREQWLVDGD 549
            F+KQ+SR +WL +GD
Sbjct: 337 SFYKQKSRIKWLKEGD 336

BLAST of Lcy01g008540 vs. TAIR 10
Match: AT1G43760.1 (DNAse I-like superfamily protein )

HSP 1 Score: 72.0 bits (175), Expect = 2.6e-12
Identity = 93/387 (24.03%), Postives = 144/387 (37.21%), Query Frame = 0

Query: 318 SDTPWLVGGDFNAILQHAEKFGRRMT--VENELDAFRLALEDCSLSDMGLSGDIYTWSNR 377
           +D   ++ GDF+ I   ++ +    T      L+ F+  L D  L D+   G  YTWSN 
Sbjct: 217 TDQLMILVGDFDQIAATSDHYSVLQTSIPMRGLEEFQNCLRDSDLVDIPSRGVHYTWSNH 276

Query: 378 RPGAKLISERLDRVVCTNTWRLLFPQSEIIHLDYHGF-DHRPVGLLLYPTSPLLRPFGKR 437
           +    +I  +LDR +    W   FP S I   +  G  DH P  ++L      L    K+
Sbjct: 277 QDDNPII-RKLDRAIANGDWFSSFP-SAIAVFELSGVSDHSPCIIIL----ENLPKRSKK 336

Query: 438 LSRFEDVWMRYPHCSQIVESGW-NSVSGWLDPYQLVQKTGVCMKEQSVWGKSKKGNYGHR 497
             R+      +P     +   W   +      + L +      K   +  +   GN  H+
Sbjct: 337 CFRYFSFLSTHPTFLVSLTVAWEEQIPVGSHMFSLGEHLKAAKKCCKLLNRQGFGNIQHK 396

Query: 498 IAEASCKVQ-LAIQNLGMQIDRTKLLE--AEDKLEQLLAEEEVFWKQRSREQWLVDGDRN 557
             EA   ++ +  Q L    D    +E  A  K     A  E F++Q+SR +WL DGD N
Sbjct: 397 TKEALDSLESIQSQLLTNPSDSLFRVEHVARKKWNFFAAALESFYRQKSRIKWLQDGDAN 456

Query: 558 T---HPVI-----QEAIHFVR---------PTVTEDMNCR--LHQPFTEAEVYT-----T 617
           T   H VI     +  I F+R          T  ++M      H   +++++ T      
Sbjct: 457 TRFFHKVILANQAKNLIKFLRMDDDVRVENVTQVKEMIVAYYTHLLGSDSDILTPDSVQR 516

Query: 618 VKQIHP-----------------------------HKAPGPDGLSGAFYHQFWPIVGVDV 645
           +K IHP                             +KAPGPD  +  F+ + W +V    
Sbjct: 517 IKDIHPFRCNDTLASRLSALPSDKEITAAVFAMPRNKAPGPDSFTAEFFWESWFVVKDST 576

BLAST of Lcy01g008540 vs. TAIR 10
Match: AT3G09510.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 62.0 bits (149), Expect = 2.7e-09
Identity = 35/109 (32.11%), Postives = 50/109 (45.87%), Query Frame = 0

Query: 645 QAFDHEEAKIISAIPLNHGFLADRQVWHYEKSGIYTVKSGYRVAQSAEFSQIPSSSSLDS 704
           Q  D  +   I  I L      D+ +W+Y  +G YTV+SGY +      + IP+ +    
Sbjct: 95  QFVDQSDHGFIHRIYLAKSKKPDKIIWNYNTTGEYTVRSGYWLLTHDPSTNIPAINPPHG 154

Query: 705 KLAWWNCVWHLRLPSKIKIFLWRLCLDILPTRENLIQRGMDIPNLCVVC 754
            +     +W+L +  K+K FLWR     L T E L  RGM I   C  C
Sbjct: 155 SIDLKTRIWNLPIMPKLKHFLWRALSQALATTERLTTRGMRIDPSCPRC 203

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
P0C2F66.1e-0630.61Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1... [more]
Match NameE-valueIdentityDescription
A0A2N9IYC81.2e-6837.77Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=F... [more]
A0A2N9J4C94.6e-6534.19Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS59073 PE=4 SV=1[more]
A0A2N9J4C92.2e-0632.04Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS59073 PE=4 SV=1[more]
A0A2N9J8091.6e-0935.92Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS60637 PE=4 SV=1[more]
A0A2N9HG198.5e-1137.38Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS38757 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
XP_012836341.11.2e-6432.72PREDICTED: uncharacterized protein LOC105956976 [Erythranthe guttata][more]
KAG2663507.16.2e-6433.49hypothetical protein I3760_16G033000 [Carya illinoinensis][more]
XP_023920731.16.8e-6333.18uncharacterized protein LOC112032201 [Quercus suber][more]
XP_023920731.11.4e-1236.80uncharacterized protein LOC112032201 [Quercus suber][more]
KAF7825238.16.4e-6129.46ribonuclease H [Senna tora][more]
Match NameE-valueIdentityDescription
AT1G40390.11.5e-1225.00DNAse I-like superfamily protein [more]
AT1G43760.12.6e-1224.03DNAse I-like superfamily protein [more]
AT3G09510.12.7e-0932.11Ribonuclease H-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 510..530
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 129..167
NoneNo IPR availablePANTHERPTHR33710BNAC02G09200D PROTEINcoord: 304..495
NoneNo IPR availablePANTHERPTHR33710:SF35SUBFAMILY NOT NAMEDcoord: 304..495
IPR036691Endonuclease/exonuclease/phosphatase superfamilyGENE3D3.60.10.10Endonuclease/exonuclease/phosphatasecoord: 241..421
e-value: 2.6E-17
score: 65.4
IPR036691Endonuclease/exonuclease/phosphatase superfamilySUPERFAMILY56219DNase I-likecoord: 265..419
IPR026960Reverse transcriptase zinc-binding domainPFAMPF13966zf-RVTcoord: 679..755
e-value: 5.3E-13
score: 49.5
IPR025558Domain of unknown function DUF4283PFAMPF14111DUF4283coord: 1..67
e-value: 1.0E-6
score: 28.4

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy01g008540.1Lcy01g008540.1mRNA