Lcy01g007040 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy01g007040
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Peptidase A1 domain-containing protein
Location	Chr01: 11528374 .. 11528739 (+)
RNA-Seq Expression	Lcy01g007040
Synteny	Lcy01g007040

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGAAGCCCCAAGCAATGGAGCTCAAATTTGTCACGTTCTGGGTACACTTCTATGAGTTGCCAATGGATCTCTACAACTCATCAATGGCAGACAGACTAGGAAATGTCGTGGGTACGTTTGTAGATTATGCCAATGGTGACCGAAGATATCGATGGAAGGAGAGTATCTGTGTTCGTGTCCAGCTGGATATCTCAAAACCACTTCGACGAGGCATCAAAGTAAAGCTTGACGACCCCATGGGTAGCTGCTGGTCCCCGATTCGGTATGAAAAGCACCCAGAACTGTGTTCCTACTACGACATAATTGGACACATTGCTCAGAATTGTAGCTCATTCTATGTGGTCAACAGCTCAACATCGTAG

mRNA sequence

ATGGTGAAGCCCCAAGCAATGGAGCTCAAATTTGTCACGTTCTGGGTACACTTCTATGAGTTGCCAATGGATCTCTACAACTCATCAATGGCAGACAGACTAGGAAATGTCGTGGGTACGTTTGTAGATTATGCCAATGGTGACCGAAGATATCGATGGAAGGAGAGTATCTGTGTTCGTGTCCAGCTGGATATCTCAAAACCACTTCGACGAGGCATCAAAGTAAAGCTTGACGACCCCATGGGTAGCTGCTGGTCCCCGATTCGGTATGAAAAGCACCCAGAACTGTGTTCCTACTACGACATAATTGGACACATTGCTCAGAATTGTAGCTCATTCTATGTGGTCAACAGCTCAACATCGTAG

Coding sequence (CDS)

ATGGTGAAGCCCCAAGCAATGGAGCTCAAATTTGTCACGTTCTGGGTACACTTCTATGAGTTGCCAATGGATCTCTACAACTCATCAATGGCAGACAGACTAGGAAATGTCGTGGGTACGTTTGTAGATTATGCCAATGGTGACCGAAGATATCGATGGAAGGAGAGTATCTGTGTTCGTGTCCAGCTGGATATCTCAAAACCACTTCGACGAGGCATCAAAGTAAAGCTTGACGACCCCATGGGTAGCTGCTGGTCCCCGATTCGGTATGAAAAGCACCCAGAACTGTGTTCCTACTACGACATAATTGGACACATTGCTCAGAATTGTAGCTCATTCTATGTGGTCAACAGCTCAACATCGTAG

Protein sequence

MVKPQAMELKFVTFWVHFYELPMDLYNSSMADRLGNVVGTFVDYANGDRRYRWKESICVRVQLDISKPLRRGIKVKLDDPMGSCWSPIRYEKHPELCSYYDIIGHIAQNCSSFYVVNSSTS

Homology

[Close]

BLAST of Lcy01g007040 vs. ExPASy TrEMBL
Match: A0A6J1DU55 (uncharacterized protein LOC111023135 OS=Momordica charantia OX=3673 GN=LOC111023135 PE=4 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 1.5e-25
Identity = 51/115 (44.35%), Postives = 75/115 (65.22%), Query Frame = 0


Query: 7   MELKFVTFWVHFYELPMDLYNSSMADRLGNVVGTFVDYANGDRRYRWKESICVRVQLDIS 66
           +E   V FW+H ++LPM   N +MA RLGN +G FVD    ++ + W  S+ +RV +DI+
Sbjct: 121 LEFNRVAFWIHLFDLPMSWLNKTMAIRLGNAIGNFVDVDCNEKGFSWGASLRIRVLIDIT 180

Query: 67  KPLRRGIKVKLDDPMGSCWSPIRYEKHPELCSYYDIIGHIAQNCSSFYVVNSSTS 122
           KPLRRGIK+ +D PMG CW PI+YE+ P+ C +  +IGH + +C + Y+     S
Sbjct: 181 KPLRRGIKINIDGPMGGCWIPIQYERLPDFCYFCGVIGHSSHDCDARYLAAQDDS 235

[Close]

BLAST of Lcy01g007040 vs. ExPASy TrEMBL
Match: A0A6J1BSZ1 (uncharacterized protein LOC111005481 OS=Momordica charantia OX=3673 GN=LOC111005481 PE=4 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 2.2e-21
Identity = 47/111 (42.34%), Postives = 69/111 (62.16%), Query Frame = 0


Query: 1   MVKPQAMELKFVTFWVHFYELPMDLYNSSMADRLGNVVGTFVDYANGDRRYRWKESICVR 60
           + KP  M+ + V+ WVHF++L +   N +MA RLGN +G F D  +    + W   + VR
Sbjct: 116 LTKPLDMDFRNVSLWVHFFDLSLACMNKTMATRLGNAIGLFEDVESNANNFCWGSCLRVR 175

Query: 61  VQLDISKPLRRGIKVKLDDPMGSCWSPIRYEKHPELCSYYDIIGHIAQNCS 112
           V+ D+ KPL RGIK+ LD PMG CW PI+YE+ P+   +   + HI ++CS
Sbjct: 176 VRFDVMKPLHRGIKLNLDGPMGGCWIPIQYERLPDFRYHCGRLDHILKDCS 226

[Close]

BLAST of Lcy01g007040 vs. ExPASy TrEMBL
Match: A0A6J1DX30 (uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024874 PE=4 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 7.2e-17
Identity = 42/97 (43.30%), Postives = 59/97 (60.82%), Query Frame = 0


Query: 1   MVKPQAMELKFVTFWVHFYELPMDLYNSSMADRLGNVVGTFVDYANGDRRYRWKESICVR 60
           ++ P  ++   +  WV F++LP+      MA RLGN +G F +    D    W  ++ VR
Sbjct: 116 LIPPSELDFTKLPIWVRFFDLPLGCITRDMAIRLGNALGGFEEADCDDLNPDWGSNLRVR 175

Query: 61  VQLDISKPLRRGIKVKLDDPMGSCWSPIRYEKHPELC 98
           V LDISKPLRRGIK+ LD P+G  W PI+YE+ P+ C
Sbjct: 176 VMLDISKPLRRGIKLNLDGPIGGAWIPIQYERLPDFC 212

[Close]

BLAST of Lcy01g007040 vs. ExPASy TrEMBL
Match: A0A6P9EH14 (uncharacterized protein LOC108984200 OS=Juglans regia OX=51240 GN=LOC108984200 PE=4 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 3.4e-14
Identity = 45/120 (37.50%), Postives = 70/120 (58.33%), Query Frame = 0


Query: 1   MVKPQAMELKFVTFWVHFYELPMDLYNSSMADRLGNVVGTF--VDYANGDRRYRWKESIC 60
           +V+ + + +  V FWV  Y+LP+   NS +   +G+++G F  VD A G+  + W E + 
Sbjct: 113 LVQAKGLTIVHVPFWVRIYDLPLMARNSYVGKLIGSLIGEFLEVDLAKGE--FEWGEFMR 172

Query: 61  VRVQLDISKPLRRGIKVKLDDPMGSCWSPIRYEKHPELCSYYDIIGHIAQNCSSFYVVNS 119
           VRV LDIS PL+R  K+KL D    CW  + YE+ P+ C    ++GH  + C+ F  VN+
Sbjct: 173 VRVLLDISTPLQRRKKLKLGDE-NYCWVRLVYERLPDFCYQCGLLGHSLRECAEFISVNA 229

[Close]

BLAST of Lcy01g007040 vs. ExPASy TrEMBL
Match: A0A803QHU7 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 4.4e-14
Identity = 41/98 (41.84%), Postives = 53/98 (54.08%), Query Frame = 0


Query: 8   ELKFVTFWVHFYELPMDLYNSSMADRLGNVVGTFVDYANGDRRYRWKESICVRVQLDISK 67
           +LKF  FWV  Y LP      S+A  LGN++G F+D         W   + VRV+LD+SK
Sbjct: 79  DLKFTPFWVQIYRLPFLSKTKSLAIALGNIIGEFLDVFEDSLNEGWGPFLRVRVKLDVSK 138

Query: 68  PLRRGIKVKLDDPMGSCWSPIRYEKHPELCSYYDIIGH 106
           PL+RG  + L +     W   RYE+ PE C    IIGH
Sbjct: 139 PLKRGRMISLSNVRDKFWVDFRYERLPEYCMECGIIGH 176

[Close]

BLAST of Lcy01g007040 vs. NCBI nr
Match: XP_022156185.1 (uncharacterized protein LOC111023135 [Momordica charantia] >XP_022156186.1 uncharacterized protein LOC111023135 [Momordica charantia])

HSP 1 Score: 125.6 bits (314), Expect = 3.0e-25
Identity = 51/115 (44.35%), Postives = 75/115 (65.22%), Query Frame = 0


Query: 7   MELKFVTFWVHFYELPMDLYNSSMADRLGNVVGTFVDYANGDRRYRWKESICVRVQLDIS 66
           +E   V FW+H ++LPM   N +MA RLGN +G FVD    ++ + W  S+ +RV +DI+
Sbjct: 121 LEFNRVAFWIHLFDLPMSWLNKTMAIRLGNAIGNFVDVDCNEKGFSWGASLRIRVLIDIT 180

Query: 67  KPLRRGIKVKLDDPMGSCWSPIRYEKHPELCSYYDIIGHIAQNCSSFYVVNSSTS 122
           KPLRRGIK+ +D PMG CW PI+YE+ P+ C +  +IGH + +C + Y+     S
Sbjct: 181 KPLRRGIKINIDGPMGGCWIPIQYERLPDFCYFCGVIGHSSHDCDARYLAAQDDS 235

[Close]

BLAST of Lcy01g007040 vs. NCBI nr
Match: XP_022132681.1 (uncharacterized protein LOC111005481 [Momordica charantia])

HSP 1 Score: 111.7 bits (278), Expect = 4.5e-21
Identity = 47/111 (42.34%), Postives = 69/111 (62.16%), Query Frame = 0


Query: 1   MVKPQAMELKFVTFWVHFYELPMDLYNSSMADRLGNVVGTFVDYANGDRRYRWKESICVR 60
           + KP  M+ + V+ WVHF++L +   N +MA RLGN +G F D  +    + W   + VR
Sbjct: 116 LTKPLDMDFRNVSLWVHFFDLSLACMNKTMATRLGNAIGLFEDVESNANNFCWGSCLRVR 175

Query: 61  VQLDISKPLRRGIKVKLDDPMGSCWSPIRYEKHPELCSYYDIIGHIAQNCS 112
           V+ D+ KPL RGIK+ LD PMG CW PI+YE+ P+   +   + HI ++CS
Sbjct: 176 VRFDVMKPLHRGIKLNLDGPMGGCWIPIQYERLPDFRYHCGRLDHILKDCS 226

[Close]

BLAST of Lcy01g007040 vs. NCBI nr
Match: XP_022158377.1 (uncharacterized protein LOC111024874 [Momordica charantia])

HSP 1 Score: 96.7 bits (239), Expect = 1.5e-16
Identity = 42/97 (43.30%), Postives = 59/97 (60.82%), Query Frame = 0


Query: 1   MVKPQAMELKFVTFWVHFYELPMDLYNSSMADRLGNVVGTFVDYANGDRRYRWKESICVR 60
           ++ P  ++   +  WV F++LP+      MA RLGN +G F +    D    W  ++ VR
Sbjct: 116 LIPPSELDFTKLPIWVRFFDLPLGCITRDMAIRLGNALGGFEEADCDDLNPDWGSNLRVR 175

Query: 61  VQLDISKPLRRGIKVKLDDPMGSCWSPIRYEKHPELC 98
           V LDISKPLRRGIK+ LD P+G  W PI+YE+ P+ C
Sbjct: 176 VMLDISKPLRRGIKLNLDGPIGGAWIPIQYERLPDFC 212

[Close]

BLAST of Lcy01g007040 vs. NCBI nr
Match: KAF5469007.1 (hypothetical protein F2P56_013112 [Juglans regia])

HSP 1 Score: 87.8 bits (216), Expect = 6.9e-14
Identity = 45/120 (37.50%), Postives = 70/120 (58.33%), Query Frame = 0


Query: 1   MVKPQAMELKFVTFWVHFYELPMDLYNSSMADRLGNVVGTF--VDYANGDRRYRWKESIC 60
           +V+ + + +  V FWV  Y+LP+   NS +   +G+++G F  VD A G+  + W E + 
Sbjct: 113 LVQAKGLTIVHVPFWVRIYDLPLMARNSYVGKLIGSLIGEFLEVDLAKGE--FEWGEFMR 172

Query: 61  VRVQLDISKPLRRGIKVKLDDPMGSCWSPIRYEKHPELCSYYDIIGHIAQNCSSFYVVNS 119
           VRV LDIS PL+R  K+KL D    CW  + YE+ P+ C    ++GH  + C+ F  VN+
Sbjct: 173 VRVLLDISTPLQRRKKLKLGDE-NYCWVRLVYERLPDFCYQCGLLGHSLRECAEFISVNA 229

[Close]

BLAST of Lcy01g007040 vs. NCBI nr
Match: XP_035546641.1 (uncharacterized protein LOC108984200 [Juglans regia])

HSP 1 Score: 87.8 bits (216), Expect = 6.9e-14
Identity = 45/120 (37.50%), Postives = 70/120 (58.33%), Query Frame = 0


Query: 1   MVKPQAMELKFVTFWVHFYELPMDLYNSSMADRLGNVVGTF--VDYANGDRRYRWKESIC 60
           +V+ + + +  V FWV  Y+LP+   NS +   +G+++G F  VD A G+  + W E + 
Sbjct: 113 LVQAKGLTIVHVPFWVRIYDLPLMARNSYVGKLIGSLIGEFLEVDLAKGE--FEWGEFMR 172

Query: 61  VRVQLDISKPLRRGIKVKLDDPMGSCWSPIRYEKHPELCSYYDIIGHIAQNCSSFYVVNS 119
           VRV LDIS PL+R  K+KL D    CW  + YE+ P+ C    ++GH  + C+ F  VN+
Sbjct: 173 VRVLLDISTPLQRRKKLKLGDE-NYCWVRLVYERLPDFCYQCGLLGHSLRECAEFISVNA 229

The following BLAST results are available for this feature:

BLAST of Lcy01g007040 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy01g007040 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DU55	1.5e-25	44.35	uncharacterized protein LOC111023135 OS=Momordica charantia OX=3673 GN=LOC111023...	[more]
A0A6J1BSZ1	2.2e-21	42.34	uncharacterized protein LOC111005481 OS=Momordica charantia OX=3673 GN=LOC111005...	[more]
A0A6J1DX30	7.2e-17	43.30	uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024...	[more]
A0A6P9EH14	3.4e-14	37.50	uncharacterized protein LOC108984200 OS=Juglans regia OX=51240 GN=LOC108984200 P...	[more]
A0A803QHU7	4.4e-14	41.84	Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1	[more]

BLAST of Lcy01g007040 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022156185.1	3.0e-25	44.35	uncharacterized protein LOC111023135 [Momordica charantia] >XP_022156186.1 uncha...	[more]
XP_022132681.1	4.5e-21	42.34	uncharacterized protein LOC111005481 [Momordica charantia]	[more]
XP_022158377.1	1.5e-16	43.30	uncharacterized protein LOC111024874 [Momordica charantia]	[more]
KAF5469007.1	6.9e-14	37.50	hypothetical protein F2P56_013112 [Juglans regia]	[more]
XP_035546641.1	6.9e-14	37.50	uncharacterized protein LOC108984200 [Juglans regia]	[more]

BLAST of Lcy01g007040 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025558	Domain of unknown function DUF4283	PFAM	PF14111	DUF4283	coord: 2..61 e-value: 1.4E-8 score: 34.4
IPR040256	Uncharacterized protein At4g02000-like	PANTHER	PTHR31286	GLYCINE-RICH CELL WALL STRUCTURAL PROTEIN 1.8-LIKE	coord: 5..117
None	No IPR available	PANTHER	PTHR31286:SF84	SUBFAMILY NOT NAMED	coord: 5..117

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy01g007040.1	Lcy01g007040.1	mRNA