Lcy01g007010 (gene) Sponge gourd (P93075) v1

Overview
NameLcy01g007010
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionDUF1985 domain-containing protein
LocationChr01: 11508340 .. 11508705 (-)
RNA-Seq ExpressionLcy01g007010
SyntenyLcy01g007010
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATGGCACCCCATGGAAGATTAAACCCACTGATCGTTTCCCCAGTGAAGGTACGTGCCTGTCTCACATAAGCAGTGCCAATCAGGCCGTGAAAAAGGAAGCTGACCGCGACTCAATTGGAGTTGTTCAAAACTGGTACTATATTCGGCCACCTGCTTGATGTTGATCTCGTCTTCAACAGTCAGGTCGTCCATCACATATTGCTGAGGGAGGTAGACGACGATAGACCTAAAGTAATGAGCTTCAATCTGAGGGGCACGGTTGTGTCGTTTTCGAAGGAGGAATTCATGTTGATGACTAGGCTGTGGGGGAGTGGGAGTGGTATTGGTGATGTGCAGAGAGGTGAATCCACTGTGGACCTGTAG

mRNA sequence

ATGATGGCACCCCATGGAAGATTAAACCCACTGATCGTTTCCCCAGTGAAGGTCGTCCATCACATATTGCTGAGGGAGGTAGACGACGATAGACCTAAAGTAATGAGCTTCAATCTGAGGGGCACGGTTGTGTCGTTTTCGAAGGAGGAATTCATGTTGATGACTAGGCTGTGGGGGAGTGGGAGTGGTATTGGTGATGTGCAGAGAGGTGAATCCACTGTGGACCTGTAG

Coding sequence (CDS)

ATGATGGCACCCCATGGAAGATTAAACCCACTGATCGTTTCCCCAGTGAAGGTCGTCCATCACATATTGCTGAGGGAGGTAGACGACGATAGACCTAAAGTAATGAGCTTCAATCTGAGGGGCACGGTTGTGTCGTTTTCGAAGGAGGAATTCATGTTGATGACTAGGCTGTGGGGGAGTGGGAGTGGTATTGGTGATGTGCAGAGAGGTGAATCCACTGTGGACCTGTAG

Protein sequence

MMAPHGRLNPLIVSPVKVVHHILLREVDDDRPKVMSFNLRGTVVSFSKEEFMLMTRLWGSGSGIGDVQRGESTVDL
Homology
[Close]
BLAST of Lcy01g007010 vs. ExPASy TrEMBL
Match: A0A0A0KM59 (DUF1985 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G141180 PE=4 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 5.0e-08
Identity = 34/59 (57.63%), Postives = 42/59 (71.19%), Query Frame = 0 

Query: 18  VVHHILLREVDDDRPKVMSFNLRGTVVSFSKEEFMLMTRLWGSGSGIGDVQRGESTVDL 77
           +VHHILLREV D+RP  MSFNL G + +FSKEEF+L+T LW S +    V R E+T  L
Sbjct: 62  LVHHILLREVKDERPDAMSFNLNGIIATFSKEEFLLVTGLWPSPT--KPVPRVEATKSL 118

[Close]
BLAST of Lcy01g007010 vs. ExPASy TrEMBL
Match: A0A5A7TGU0 (Ulp1-like peptidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G001140 PE=4 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 1.1e-07
Identity = 29/43 (67.44%), Postives = 35/43 (81.40%), Query Frame = 0 

Query: 18  VVHHILLREVDDDRPKVMSFNLRGTVVSFSKEEFMLMTRLWGS 61
           +VHHILLREV D+RP  MSFNL G + +FSKEEF+L+T LW S
Sbjct: 68  LVHHILLREVKDERPDAMSFNLNGIIATFSKEEFLLVTGLWPS 110

[Close]
BLAST of Lcy01g007010 vs. ExPASy TrEMBL
Match: A0A1S3ATU8 (uncharacterized protein LOC103482899 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103482899 PE=4 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 1.1e-07
Identity = 29/43 (67.44%), Postives = 35/43 (81.40%), Query Frame = 0 

Query: 18  VVHHILLREVDDDRPKVMSFNLRGTVVSFSKEEFMLMTRLWGS 61
           +VHHILLREV D+RP  MSFNL G + +FSKEEF+L+T LW S
Sbjct: 145 LVHHILLREVKDERPDAMSFNLNGIIATFSKEEFLLVTGLWPS 187

[Close]
BLAST of Lcy01g007010 vs. ExPASy TrEMBL
Match: A0A1S3AUB0 (uncharacterized protein LOC103482899 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103482899 PE=4 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 1.1e-07
Identity = 29/43 (67.44%), Postives = 35/43 (81.40%), Query Frame = 0 

Query: 18  VVHHILLREVDDDRPKVMSFNLRGTVVSFSKEEFMLMTRLWGS 61
           +VHHILLREV D+RP  MSFNL G + +FSKEEF+L+T LW S
Sbjct: 143 LVHHILLREVKDERPDAMSFNLNGIIATFSKEEFLLVTGLWPS 185

[Close]
BLAST of Lcy01g007010 vs. ExPASy TrEMBL
Match: A0A6J1DSS5 (uncharacterized protein LOC111023969 OS=Momordica charantia OX=3673 GN=LOC111023969 PE=4 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 8.0e-06
Identity = 27/47 (57.45%), Postives = 35/47 (74.47%), Query Frame = 0 

Query: 18  VVHHILLREVDDDRPKVMSFNLRGTVVSFSKEEFMLMTRLWGSGSGI 65
           +VH+ LLREV D RP VM F++ GT+V+FSK EF+LMT LW S   +
Sbjct: 62  LVHYFLLREVVDTRPDVMRFDILGTIVTFSKAEFLLMTGLWRSSGRV 108

[Close]
BLAST of Lcy01g007010 vs. NCBI nr
Match: KGN49944.1 (hypothetical protein Csa_000148 [Cucumis sativus])

HSP 1 Score: 66.6 bits (161), Expect = 1.0e-07
Identity = 34/59 (57.63%), Postives = 42/59 (71.19%), Query Frame = 0 

Query: 18  VVHHILLREVDDDRPKVMSFNLRGTVVSFSKEEFMLMTRLWGSGSGIGDVQRGESTVDL 77
           +VHHILLREV D+RP  MSFNL G + +FSKEEF+L+T LW S +    V R E+T  L
Sbjct: 62  LVHHILLREVKDERPDAMSFNLNGIIATFSKEEFLLVTGLWPSPT--KPVPRVEATKSL 118

[Close]
BLAST of Lcy01g007010 vs. NCBI nr
Match: XP_031741885.1 (uncharacterized protein LOC105435430 isoform X2 [Cucumis sativus])

HSP 1 Score: 66.6 bits (161), Expect = 1.0e-07
Identity = 34/59 (57.63%), Postives = 42/59 (71.19%), Query Frame = 0 

Query: 18  VVHHILLREVDDDRPKVMSFNLRGTVVSFSKEEFMLMTRLWGSGSGIGDVQRGESTVDL 77
           +VHHILLREV D+RP  MSFNL G + +FSKEEF+L+T LW S +    V R E+T  L
Sbjct: 145 LVHHILLREVKDERPDAMSFNLNGIIATFSKEEFLLVTGLWPSPT--KPVPRVEATKSL 201

[Close]
BLAST of Lcy01g007010 vs. NCBI nr
Match: XP_011654656.1 (uncharacterized protein LOC105435430 isoform X1 [Cucumis sativus])

HSP 1 Score: 66.6 bits (161), Expect = 1.0e-07
Identity = 34/59 (57.63%), Postives = 42/59 (71.19%), Query Frame = 0 

Query: 18  VVHHILLREVDDDRPKVMSFNLRGTVVSFSKEEFMLMTRLWGSGSGIGDVQRGESTVDL 77
           +VHHILLREV D+RP  MSFNL G + +FSKEEF+L+T LW S +    V R E+T  L
Sbjct: 145 LVHHILLREVKDERPDAMSFNLNGIIATFSKEEFLLVTGLWPSPT--KPVPRVEATKSL 201

[Close]
BLAST of Lcy01g007010 vs. NCBI nr
Match: XP_008437500.1 (PREDICTED: uncharacterized protein LOC103482899 isoform X1 [Cucumis melo])

HSP 1 Score: 65.5 bits (158), Expect = 2.3e-07
Identity = 29/43 (67.44%), Postives = 35/43 (81.40%), Query Frame = 0 

Query: 18  VVHHILLREVDDDRPKVMSFNLRGTVVSFSKEEFMLMTRLWGS 61
           +VHHILLREV D+RP  MSFNL G + +FSKEEF+L+T LW S
Sbjct: 145 LVHHILLREVKDERPDAMSFNLNGIIATFSKEEFLLVTGLWPS 187

[Close]
BLAST of Lcy01g007010 vs. NCBI nr
Match: XP_008437501.1 (PREDICTED: uncharacterized protein LOC103482899 isoform X2 [Cucumis melo])

HSP 1 Score: 65.5 bits (158), Expect = 2.3e-07
Identity = 29/43 (67.44%), Postives = 35/43 (81.40%), Query Frame = 0 

Query: 18  VVHHILLREVDDDRPKVMSFNLRGTVVSFSKEEFMLMTRLWGS 61
           +VHHILLREV D+RP  MSFNL G + +FSKEEF+L+T LW S
Sbjct: 143 LVHHILLREVKDERPDAMSFNLNGIIATFSKEEFLLVTGLWPS 185

The following BLAST results are available for this feature:
BLAST of Lcy01g007010 vs.
Match NameE-valueIdentityDescription
BLAST of Lcy01g007010 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KM595.0e-0857.63DUF1985 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G141180 PE=... [more]
A0A5A7TGU01.1e-0767.44Ulp1-like peptidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G... [more]
A0A1S3ATU81.1e-0767.44uncharacterized protein LOC103482899 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... [more]
A0A1S3AUB01.1e-0767.44uncharacterized protein LOC103482899 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10... [more]
A0A6J1DSS58.0e-0657.45uncharacterized protein LOC111023969 OS=Momordica charantia OX=3673 GN=LOC111023... [more]
BLAST of Lcy01g007010 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN49944.11.0e-0757.63hypothetical protein Csa_000148 [Cucumis sativus][more]
XP_031741885.11.0e-0757.63uncharacterized protein LOC105435430 isoform X2 [Cucumis sativus][more]
XP_011654656.11.0e-0757.63uncharacterized protein LOC105435430 isoform X1 [Cucumis sativus][more]
XP_008437500.12.3e-0767.44PREDICTED: uncharacterized protein LOC103482899 isoform X1 [Cucumis melo][more]
XP_008437501.12.3e-0767.44PREDICTED: uncharacterized protein LOC103482899 isoform X2 [Cucumis melo][more]
BLAST of Lcy01g007010 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy01g007010.1Lcy01g007010.1mRNA