Lcy01g006470 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy01g006470
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Reverse transcriptase domain-containing protein
Location	Chr01: 9961789 .. 9962835 (+)
RNA-Seq Expression	Lcy01g006470
Synteny	Lcy01g006470

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATTTTAAGGATATTCATTGCTTCAATTTAGCCCTATTAGCAAAGCAAGGATGGCGCATTCTCAAGTGCCTGAACAGCCTTTTGGCAAGGATTTACAGAGAGCGTTACTTCCGACATGGTAATTTTCTGGAGGCTGATATCAAAGGGAGGGCCTCGTGGGGTTGGAGAAGCATTGTGGCGGGTAGAGAGGTATTAAAACAAGGATTTCGTTGGCGAGTTGGAGCAGAAACGAAGCTGAACATCTGGAATGACCCATGGATCCCTAGGCCTTCGACTTTTAAGCCGTTGTGTTGCCTAAACAATACATGGCAACAAGTGAGGGATCTGTTGGAGGTGGACGGGATGAAATGGAGAGAGGAGCGCCTAAGATCCTGTCTGAGTCCTGTGGATGTGGATTTAATTTTAGCCATGCCGATTAGCAGAAGGAGTCTTCCAGACCGGGCTGTGTGGCACTTCACAAACTCAGGGGAGTACTCAGTAAAATCCGGTTACCGTATGGCAAAGAGCATGTCCTCAAATGCTGGTTCAAGCAGGACAGGGGTTAGTGAGCCCATCTGGAAATCCATCTGGAAGCTTCCTTGAGCCAAAAAGGTTAGGAATTTCTTGTGGCGGGCTTGTATAAACTTCCTAGCAGTAAATGGGAATCTTATTCGAAGAGGCTGGCAACTTGATGAATGCTGCTAAATCTGCAGAAGAGATGTTGAAACGGTAAATCATGCGCTTTTGGAGTGTGACCCAGCTAAGGCCTTCTGGTTTGGGTCCCCGCTCCAATTAGATACAAGTAAGTTCAACGGGTTGCGTTTTGTGACAAGCTGGGAGAGGATTTGTTGTGGTCTGGAAGGGAAGGATCACACGGAGGATGCTCTCTACTTCCTATCGTATGGCATGTGGAGGGTGTGGAAAGAGAGGAATGCGATGGTTTTTAGAAACGGAGTCCCGAATATAGAGTTTAACATTTCTGCAACGATTAAAGAAGCTAATGAGTTTAGTCAGGTGTTGAGGGAGGGATTTAGTGCTGATTTAAGGCCGATAGCAGATCAGTAG

mRNA sequence

ATGAATTTTAAGGATATTCATTGCTTCAATTTAGCCCTATTAGCAAAGCAAGGATGGCGCATTCTCAAGTGCCTGAACAGCCTTTTGGCAAGGATTTACAGAGAGCGTTACTTCCGACATGGTAATTTTCTGGAGGCTGATATCAAAGGGAGGGCCTCGTGGGGTTGGAGAAGCATTGTGGCGGGTAGAGAGGTATTAAAACAAGGATTTCGTTGGCGAGTTGGAGCAGAAACGAAGCTGAACATCTGGAATGACCCATGGATCCCTAGGCCTTCGACTTTTAAGCCGTTGTGTTGCCTAAACAATACATGGCAACAAGTGAGGGATCTGTTGGAGGTGGACGGGATGAAATGGAGAGAGGAGCGCCTAAGATCCTGTCTGAGTCCTGTGGATGTGGATTTAATTTTAGCCATGCCGATTAGCAGAAGGAGTCTTCCAGACCGGGCTGTGTGGCACTTCACAAACTCAGGGGAGTACTCAGTAAAATCCGGTTACCGTATGGCAAAGAGCATAAGAGATGTTGAAACGGTAAATCATGCGCTTTTGGAGTGTGACCCAGCTAAGGCCTTCTGGTTTGGGTCCCCGCTCCAATTAGATACAAGTAAGTTCAACGGGTTGCGTTTTGTGACAAGCTGGGAGAGGATTTGTTGTGGTCTGGAAGGGAAGGATCACACGGAGGATGCTCTCTACTTCCTATCGTATGGCATGTGGAGGGTGTGGAAAGAGAGGAATGCGATGGTTTTTAGAAACGGAGTCCCGAATATAGAGTTTAACATTTCTGCAACGATTAAAGAAGCTAATGAGTTTAGTCAGGTGTTGAGGGAGGGATTTAGTGCTGATTTAAGGCCGATAGCAGATCAGTAG

Coding sequence (CDS)

ATGAATTTTAAGGATATTCATTGCTTCAATTTAGCCCTATTAGCAAAGCAAGGATGGCGCATTCTCAAGTGCCTGAACAGCCTTTTGGCAAGGATTTACAGAGAGCGTTACTTCCGACATGGTAATTTTCTGGAGGCTGATATCAAAGGGAGGGCCTCGTGGGGTTGGAGAAGCATTGTGGCGGGTAGAGAGGTATTAAAACAAGGATTTCGTTGGCGAGTTGGAGCAGAAACGAAGCTGAACATCTGGAATGACCCATGGATCCCTAGGCCTTCGACTTTTAAGCCGTTGTGTTGCCTAAACAATACATGGCAACAAGTGAGGGATCTGTTGGAGGTGGACGGGATGAAATGGAGAGAGGAGCGCCTAAGATCCTGTCTGAGTCCTGTGGATGTGGATTTAATTTTAGCCATGCCGATTAGCAGAAGGAGTCTTCCAGACCGGGCTGTGTGGCACTTCACAAACTCAGGGGAGTACTCAGTAAAATCCGGTTACCGTATGGCAAAGAGCATAAGAGATGTTGAAACGGTAAATCATGCGCTTTTGGAGTGTGACCCAGCTAAGGCCTTCTGGTTTGGGTCCCCGCTCCAATTAGATACAAGTAAGTTCAACGGGTTGCGTTTTGTGACAAGCTGGGAGAGGATTTGTTGTGGTCTGGAAGGGAAGGATCACACGGAGGATGCTCTCTACTTCCTATCGTATGGCATGTGGAGGGTGTGGAAAGAGAGGAATGCGATGGTTTTTAGAAACGGAGTCCCGAATATAGAGTTTAACATTTCTGCAACGATTAAAGAAGCTAATGAGTTTAGTCAGGTGTTGAGGGAGGGATTTAGTGCTGATTTAAGGCCGATAGCAGATCAGTAG

Protein sequence

MNFKDIHCFNLALLAKQGWRILKCLNSLLARIYRERYFRHGNFLEADIKGRASWGWRSIVAGREVLKQGFRWRVGAETKLNIWNDPWIPRPSTFKPLCCLNNTWQQVRDLLEVDGMKWREERLRSCLSPVDVDLILAMPISRRSLPDRAVWHFTNSGEYSVKSGYRMAKSIRDVETVNHALLECDPAKAFWFGSPLQLDTSKFNGLRFVTSWERICCGLEGKDHTEDALYFLSYGMWRVWKERNAMVFRNGVPNIEFNISATIKEANEFSQVLREGFSADLRPIADQ

Homology

[Close]

BLAST of Lcy01g006470 vs. ExPASy Swiss-Prot
Match: P93295 (Uncharacterized mitochondrial protein AtMg00310 OS=Arabidopsis thaliana OX=3702 GN=AtMg00310 PE=4 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 1.8e-15
Identity = 39/97 (40.21%), Postives = 58/97 (59.79%), Query Frame = 0


Query: 1   MNFKDIHCFNLALLAKQGWRILKCLNSLLARIYRERYFRHGNFLEADIKGRASWGWRSIV 60
           + F+D+  FN ALLAKQ +RI+   ++LL+R+ R RYF H + +E  +  R S+ WRSI+
Sbjct: 57  LGFRDLGWFNQALLAKQSFRIIHQPHTLLSRLLRSRYFPHSSMMECSVGTRPSYAWRSII 116

Query: 61  AGREVLKQGFRWRVGAETKLNIWNDPWIPRPSTFKPL 98
            GRE+L +G    +G      +W D WI   +   PL
Sbjct: 117 HGRELLSRGLLRTIGDGIHTKVWLDRWIMDETPLPPL 153

[Close]

BLAST of Lcy01g006470 vs. ExPASy Swiss-Prot
Match: P0C2F6 (Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1g65750 PE=3 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 2.3e-10
Identity = 55/179 (30.73%), Postives = 79/179 (44.13%), Query Frame = 0


Query: 10  NLALLAKQGWRILKCLNSLLARIYRERY----FRHGNFLEADIKGRASWGWRSIVAG-RE 69
           N AL++K GWR+L+  NSL   + +++Y     R   +L    KG  S  WRSI  G R+
Sbjct: 110 NRALISKVGWRLLQEKNSLWTLVLQKKYHVGEIRDSRWLIP--KGSWSSTWRSIAIGLRD 169

Query: 70  VLKQGFRWRVGAETKLNIWNDPWIPRPSTFKPLCCLNN--------------TWQQVR-- 129
           V+  G  W  G   ++  W D W+    + KPL  L+N               W   R  
Sbjct: 170 VVSHGVGWIPGDGQQIRFWTDRWV----SGKPLLELDNGERPTDCDTVVAKDLWIPGRGW 229

Query: 130 DLLEVDGMKWREERLRSCLSPVDVDLILAMPISRRSLPDRAVWHFTNSGEYSVKSGYRM 168
           D  ++D       RL   L  V +DL+           DR  W F+  G++SV+S Y M
Sbjct: 230 DFAKIDPYTTNNTRLE--LRAVVLDLV-------TGARDRLSWKFSQDGQFSVRSAYEM 273

[Close]

BLAST of Lcy01g006470 vs. ExPASy TrEMBL
Match: A0A6J5WPU6 (Reverse transcriptase domain-containing protein OS=Prunus armeniaca OX=36596 GN=ORAREDHAP_LOCUS20372 PE=4 SV=1)

HSP 1 Score: 218.0 bits (554), Expect = 5.1e-53
Identity = 111/354 (31.36%), Postives = 172/354 (48.59%), Query Frame = 0


Query: 1   MNFKDIHCFNLALLAKQGWRILKCLNSLLARIYRERYFRHGNFLEADIKGRASWGWRSIV 60
           + F+D+ CFN+ LLAK GWRIL   +SLLA +  ++YF   +FL A  +  +SWGW+ I+
Sbjct: 436 LGFRDLQCFNMTLLAKIGWRILHNPSSLLACLLHDKYFVGASFLTATSQKSSSWGWKGIL 495

Query: 61  AGREVLKQGFRWRVGAETKLNIWNDPWIPRPSTFKPLCCLNNTWQQVRDLLEVDGMKWRE 120
            GR +L+ G RWR+G  T + + NDPW+P P TF+ L    +    V +L++     W++
Sbjct: 496 QGRRLLESGLRWRIGDGTTVQVRNDPWLPTPYTFRTLSRHPDLPSMVHELIDPLLKTWKK 555

Query: 121 ERLRSCLSPVDVDLILAMPISRRSLPDRAVWHFTNSGEYSVKSGYRMA------------ 180
           + +  C  P +   IL++PISR   PD+ +WHF+  G Y+V+SGY +A            
Sbjct: 556 DVINRCFVPEEASHILSIPISRWGCPDKLIWHFSMHGRYTVRSGYELALHLQRNGELGRK 615

Query: 181 ---------------KSIRDV--------------------------------------- 240
                          KS+  V                                       
Sbjct: 616 GAGEASSSSSQSSVWKSVWHVDAPPKLKAFIWRGCSNILAVRHNLRRRRVPYTGECGFCG 675

Query: 241 ---ETVNHALLECDPAKAFWFGSPLQLDTSKFNGLRFVTSWERICCGLEGKDHTEDALYF 286
              ET  H   ECD A+AFWF SPLQLD SK  G  F+++W+ +   L   +H  +A+ +
Sbjct: 676 FQDETQAHIFFECDFARAFWFASPLQLDVSKLAGEDFISTWQHMMTTLNSSEHAAEAIQW 735

[Close]

BLAST of Lcy01g006470 vs. ExPASy TrEMBL
Match: A0A6J5UE59 (Reverse transcriptase domain-containing protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS23353 PE=4 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 3.3e-52
Identity = 110/338 (32.54%), Postives = 165/338 (48.82%), Query Frame = 0


Query: 1    MNFKDIHCFNLALLAKQGWRILKCLNSLLARIYRERYFRHGNFLEADIKGRASWGWRSIV 60
            + F+D+ CFN+ALLAK GWRIL   +SLLA +  ++YF   +FL A  +  +SWGW+ I+
Sbjct: 764  LGFRDLQCFNMALLAKIGWRILHNPSSLLACLLHDKYFVGASFLTATSQKSSSWGWKGIL 823

Query: 61   AGREVLKQGFRWRVGAETKLNIWNDPWIPRPSTFKPLCCLNNTWQQVRDLLEVDGMKWRE 120
             GR +L+ G RWR+G  T + + NDPW+P P TF+ L    +    V +L++     W++
Sbjct: 824  QGRRLLESGLRWRIGDGTTVQVRNDPWLPTPYTFRTLSRHPDLPYMVHELIDPLLKTWKK 883

Query: 121  ERLRSCLSPVDVDLILAMPISRRSLPDRAVWHFTNSGEYSVKSGYRMA------------ 180
            + +  C  P +   IL++PISR   PD+ +WHF   G Y+V+SGY +A            
Sbjct: 884  DVVNRCFVPEEATHILSIPISRWGCPDKLIWHFNMHGRYTVRSGYELALHLQRNGELGRK 943

Query: 181  ---------------KSIRDV--------------------------------------- 240
                           KS+  V                                       
Sbjct: 944  GAGEASSSSSQSSVWKSVWHVDAPPKLKAFIWCGCSNILAVRHNLHRRRVPCTGECGFCG 1003

Query: 241  ---ETVNHALLECDPAKAFWFGSPLQLDTSKFNGLRFVTSWERICCGLEGKDHTEDALYF 270
               ET  H   ECD A+AFWF SPLQLD SK  G  F+++W+ +   L   +H  +A+ +
Sbjct: 1004 FQDETQAHIFFECDFARAFWFASPLQLDVSKLAGEDFISTWQHMMTTLNSSEHAAEAIQW 1063

[Close]

BLAST of Lcy01g006470 vs. ExPASy TrEMBL
Match: A0A6J5YDN0 (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=ORAREDHAP_LOCUS50956 PE=4 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 1.2e-46
Identity = 105/344 (30.52%), Postives = 162/344 (47.09%), Query Frame = 0


Query: 11  LALLAKQGWRILKCLNSLLARIYRERYFRHGNFLEADIKGRASWGWRSIVAGREVLKQGF 70
           +ALLAK GWRIL   +SLLA    ++YF   +FL A  +  +SWGW+ I+ GR +L  G 
Sbjct: 1   MALLAKIGWRILHNPSSLLACSLHDKYFVGASFLTATSQKSSSWGWKGILQGRRLLDSGL 60

Query: 71  RWRVGAETKLNIWNDPWIPRPSTFKPLCCLNNTWQQVRDLLEVDGMKWREERLRSCLSPV 130
            WR+G  T + + NDPW+P P TF+ L    +    V +L++     W+++ +  C  P 
Sbjct: 61  HWRIGDGTTVQVRNDPWLPTPYTFRTLSRHPDLPSMVHELIDPLLKTWKKDVINRCFVPE 120

Query: 131 DVDLILAMPISRRSLPDRAVWHFTNSGEYSVKSGYRMA---------------------- 190
           +   IL++ ISR   PD+ +WHF+  G+Y+V+SGY +A                      
Sbjct: 121 EASHILSILISRWGCPDKLIWHFSMHGQYTVRSGYELALHLQRNGELGRKGAGEASSSSS 180

Query: 191 -----KSIRDV------------------------------------------ETVNHAL 250
                KS+  V                                          ET  H  
Sbjct: 181 QSSVWKSVWHVDAPPKLKAFIWRGCSNILAVRHNLHRRSVPCTGECGFCGFQDETQAHIF 240

Query: 251 LECDPAKAFWFGSPLQLDTSKFNGLRFVTSWERICCGLEGKDHTEDALYFLSYGMWRVWK 286
            ECD A+AFWF SPLQLD SK  G  F+++W+ +   L   +H  +A+ +  +G+WR+WK
Sbjct: 241 FECDFARAFWFASPLQLDVSKLAGEDFISTWQHMMTTLNSSEHAAEAIQWFVFGLWRIWK 300

[Close]

BLAST of Lcy01g006470 vs. ExPASy TrEMBL
Match: A0A6J5UAY2 (Reverse transcriptase domain-containing protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS20161 PE=4 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 1.8e-45
Identity = 104/345 (30.14%), Postives = 155/345 (44.93%), Query Frame = 0


Query: 1    MNFKDIHCFNLALLAKQGWRILKCLNSLLARIYRERYFRHGNFLEADIKGRASWGWRSIV 60
            M F+D+ CFNLA+LAK GWRIL+  NSLLAR+ +E+Y+ H +F+ A    + SWGW+ I+
Sbjct: 782  MGFRDLLCFNLAMLAKIGWRILRNPNSLLARLLQEKYYVHSDFMHAVCGRKVSWGWKGIL 841

Query: 61   AGREVLKQGFRWRVGAETKLNIWNDPWIPRPSTFKPLCCLNNTWQQVRDLLEVDGMKWRE 120
             GR +L+ G RWR+G    + I  D W+  PS         +    V +L++ +   W  
Sbjct: 842  QGRRILEAGLRWRIGNGENVCIQQDRWLTTPSPSLIHSRHLDMPLMVHELIDQNMRCWDM 901

Query: 121  ERLRSCLSPVDVDLILAMPISRRSLPDRAVWHFTNSGEYSVKSGYRMAKSIR-------- 180
            + +  C +P +   I  +PISR   PD+ VWH+T+ G Y+V+SGY +A ++R        
Sbjct: 902  DLVNRCFNPNEAKCISTIPISRWGCPDKKVWHYTSHGGYTVRSGYAVALTLRRNGELGRK 961

Query: 181  --------------------------------------------------DVET------ 240
                                                              DVET      
Sbjct: 962  AEGESSQGDKQRRIWKSIWGLQVPPKIRTFLWKCCRNVLAVKENLLHRGIDVETSCALCG 1021

Query: 241  -----VNHALLECDPAKAFWFGSPLQLDTSKFNGLRFVTSWERICCGLEGKDHTEDALYF 277
                   H   +C+ A+  WF SP+QLD     G  F+  WE +    E  +H  D L  
Sbjct: 1022 QEGESQVHVFFKCEFARLLWFASPIQLDPCHILGEDFIVCWENLLKKYEQVEHCNDILQV 1081

[Close]

BLAST of Lcy01g006470 vs. ExPASy TrEMBL
Match: A0A4Y1R838 (Ribonuclease H-like superfamily protein OS=Prunus dulcis OX=3755 GN=Prudu_010255 PE=4 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 3.9e-45
Identity = 102/317 (32.18%), Postives = 145/317 (45.74%), Query Frame = 0


Query: 1   MNFKDIHCFNLALLAKQGWRILKCLNSLLARIYRERYFRHGNFLEADIKGRASWGWRSIV 60
           M F+D+ CFNLA+LAK GWRIL    SLL ++  ++Y     FL+A +  + SWGWR I+
Sbjct: 77  MGFRDLVCFNLAMLAKIGWRILGQPQSLLGKVLHDKYHHGVGFLDARLGRKVSWGWRGIL 136

Query: 61  AGREVLKQGFRWRVGAETKLNIWNDPWIPRPSTFKPLCCLNNTWQQVRDLLEVDGMKWRE 120
            GR +L  G RWRVG   ++ +  DPW+P+P TFK           V +L++ +   WR 
Sbjct: 137 QGRRILLAGLRWRVGNGERIRVTEDPWLPKPYTFKTSSRHPELPMIVAELIDSESKAWRC 196

Query: 121 ERLRSCLSPVDVDLILAMPISRRSLPDRAVWHFTNSGEYSVKSGYRMA------------ 180
           + +     P +V LI +MPISR   PDR VWHF   G Y+V+SGY +A            
Sbjct: 197 DLISQLFEPHEVRLITSMPISRWGCPDRLVWHFHKQGAYTVRSGYELALYLKRNGELGVK 256

Query: 181 --------------------------------KSIRDV---------------------- 240
                                           K+ R+                       
Sbjct: 257 GIGEGSGQHNMADVWKGIWRLRIPPKIRTFIWKACRNALAVRHNLKMRRVPVDNGCAFCA 316

Query: 241 ---ETVNHALLECDPAKAFWFGSPLQLDTSKFNGLRFVTSWERICCGLEGKDHTEDALYF 249
              ET  H    CD A+A WF SPLQ D        F+  W+ +    + +   E+AL  
Sbjct: 317 HEDETQEHLFFFCDFARAMWFASPLQFDVRTLGEGDFLARWKTLREFYDTRGRVEEALQL 376

[Close]

BLAST of Lcy01g006470 vs. NCBI nr
Match: CAB4303756.1 (unnamed protein product [Prunus armeniaca])

HSP 1 Score: 218.0 bits (554), Expect = 1.1e-52
Identity = 111/354 (31.36%), Postives = 172/354 (48.59%), Query Frame = 0


Query: 1   MNFKDIHCFNLALLAKQGWRILKCLNSLLARIYRERYFRHGNFLEADIKGRASWGWRSIV 60
           + F+D+ CFN+ LLAK GWRIL   +SLLA +  ++YF   +FL A  +  +SWGW+ I+
Sbjct: 436 LGFRDLQCFNMTLLAKIGWRILHNPSSLLACLLHDKYFVGASFLTATSQKSSSWGWKGIL 495

Query: 61  AGREVLKQGFRWRVGAETKLNIWNDPWIPRPSTFKPLCCLNNTWQQVRDLLEVDGMKWRE 120
            GR +L+ G RWR+G  T + + NDPW+P P TF+ L    +    V +L++     W++
Sbjct: 496 QGRRLLESGLRWRIGDGTTVQVRNDPWLPTPYTFRTLSRHPDLPSMVHELIDPLLKTWKK 555

Query: 121 ERLRSCLSPVDVDLILAMPISRRSLPDRAVWHFTNSGEYSVKSGYRMA------------ 180
           + +  C  P +   IL++PISR   PD+ +WHF+  G Y+V+SGY +A            
Sbjct: 556 DVINRCFVPEEASHILSIPISRWGCPDKLIWHFSMHGRYTVRSGYELALHLQRNGELGRK 615

Query: 181 ---------------KSIRDV--------------------------------------- 240
                          KS+  V                                       
Sbjct: 616 GAGEASSSSSQSSVWKSVWHVDAPPKLKAFIWRGCSNILAVRHNLRRRRVPYTGECGFCG 675

Query: 241 ---ETVNHALLECDPAKAFWFGSPLQLDTSKFNGLRFVTSWERICCGLEGKDHTEDALYF 286
              ET  H   ECD A+AFWF SPLQLD SK  G  F+++W+ +   L   +H  +A+ +
Sbjct: 676 FQDETQAHIFFECDFARAFWFASPLQLDVSKLAGEDFISTWQHMMTTLNSSEHAAEAIQW 735

[Close]

BLAST of Lcy01g006470 vs. NCBI nr
Match: CAB4274760.1 (unnamed protein product [Prunus armeniaca])

HSP 1 Score: 215.3 bits (547), Expect = 6.8e-52
Identity = 110/338 (32.54%), Postives = 165/338 (48.82%), Query Frame = 0


Query: 1    MNFKDIHCFNLALLAKQGWRILKCLNSLLARIYRERYFRHGNFLEADIKGRASWGWRSIV 60
            + F+D+ CFN+ALLAK GWRIL   +SLLA +  ++YF   +FL A  +  +SWGW+ I+
Sbjct: 764  LGFRDLQCFNMALLAKIGWRILHNPSSLLACLLHDKYFVGASFLTATSQKSSSWGWKGIL 823

Query: 61   AGREVLKQGFRWRVGAETKLNIWNDPWIPRPSTFKPLCCLNNTWQQVRDLLEVDGMKWRE 120
             GR +L+ G RWR+G  T + + NDPW+P P TF+ L    +    V +L++     W++
Sbjct: 824  QGRRLLESGLRWRIGDGTTVQVRNDPWLPTPYTFRTLSRHPDLPYMVHELIDPLLKTWKK 883

Query: 121  ERLRSCLSPVDVDLILAMPISRRSLPDRAVWHFTNSGEYSVKSGYRMA------------ 180
            + +  C  P +   IL++PISR   PD+ +WHF   G Y+V+SGY +A            
Sbjct: 884  DVVNRCFVPEEATHILSIPISRWGCPDKLIWHFNMHGRYTVRSGYELALHLQRNGELGRK 943

Query: 181  ---------------KSIRDV--------------------------------------- 240
                           KS+  V                                       
Sbjct: 944  GAGEASSSSSQSSVWKSVWHVDAPPKLKAFIWCGCSNILAVRHNLHRRRVPCTGECGFCG 1003

Query: 241  ---ETVNHALLECDPAKAFWFGSPLQLDTSKFNGLRFVTSWERICCGLEGKDHTEDALYF 270
               ET  H   ECD A+AFWF SPLQLD SK  G  F+++W+ +   L   +H  +A+ +
Sbjct: 1004 FQDETQAHIFFECDFARAFWFASPLQLDVSKLAGEDFISTWQHMMTTLNSSEHAAEAIQW 1063

[Close]

BLAST of Lcy01g006470 vs. NCBI nr
Match: XP_028948114.1 (uncharacterized protein LOC114820933 [Malus domestica])

HSP 1 Score: 206.1 bits (523), Expect = 4.1e-49
Identity = 112/347 (32.28%), Postives = 158/347 (45.53%), Query Frame = 0


Query: 1    MNFKDIHCFNLALLAKQGWRILKCLNSLLARIYRERYFRHGNFLEADIKGRASWGWRSIV 60
            + FKDI CFNLA LAK GWRI++  +SLLA + RE+YF    F EA      SWGW+ I 
Sbjct: 825  LGFKDIQCFNLAFLAKIGWRIIQNPSSLLAFVLREKYFPEKTFREAGKGKNTSWGWKGIF 884

Query: 61   AGREVLKQGFRWRVGAETKLNIWNDPWIPRPSTF--KPLCCLNNTWQQVRDLLEVDGMKW 120
              R VL+ G RWRVG  TK+NI +DPW P+P+TF  KP  CL  T   V DL+E +   W
Sbjct: 885  EARRVLQHGIRWRVGDGTKINIRDDPWFPKPTTFLVKPRDCLQET--MVSDLIEPNSRSW 944

Query: 121  REERLRSCLSPVDVDLILAMPISRRSLPDRAVWHFTNSGEYSVKSGYRMAKSIRD----- 180
            + E +    +  D   IL++P+S+    DR VWH T  G YSVK+GY +A S+ +     
Sbjct: 945  KSEVIMQGFNSEDTKHILSIPLSKFGCCDRLVWHHTVDGSYSVKTGYGVAVSLLENGVLG 1004

Query: 181  ------------------------------------------------------------ 240
                                                                        
Sbjct: 1005 KKGRGVPSMHHNTNQVWKGIWNLQVPNKIKFFIWRCCNNAFAVRHNLKRRYMRIDNVCGV 1064

Query: 241  ----VETVNHALLECDPAKAFWFGSPLQLDTSKFNGLRFVTSWERICCGLEGKDHTEDAL 277
                 E+ NH    CD +   WF SPL L+  +  G  F+ SW   C  ++ ++  E  +
Sbjct: 1065 CNLVDESENHLFFRCDLSHRLWFCSPLHLNCIELIGADFLDSWNIFCTSIKDREDAEAIM 1124

[Close]

BLAST of Lcy01g006470 vs. NCBI nr
Match: CAB4321714.1 (unnamed protein product [Prunus armeniaca])

HSP 1 Score: 196.8 bits (499), Expect = 2.5e-46
Identity = 105/344 (30.52%), Postives = 162/344 (47.09%), Query Frame = 0


Query: 11  LALLAKQGWRILKCLNSLLARIYRERYFRHGNFLEADIKGRASWGWRSIVAGREVLKQGF 70
           +ALLAK GWRIL   +SLLA    ++YF   +FL A  +  +SWGW+ I+ GR +L  G 
Sbjct: 1   MALLAKIGWRILHNPSSLLACSLHDKYFVGASFLTATSQKSSSWGWKGILQGRRLLDSGL 60

Query: 71  RWRVGAETKLNIWNDPWIPRPSTFKPLCCLNNTWQQVRDLLEVDGMKWREERLRSCLSPV 130
            WR+G  T + + NDPW+P P TF+ L    +    V +L++     W+++ +  C  P 
Sbjct: 61  HWRIGDGTTVQVRNDPWLPTPYTFRTLSRHPDLPSMVHELIDPLLKTWKKDVINRCFVPE 120

Query: 131 DVDLILAMPISRRSLPDRAVWHFTNSGEYSVKSGYRMA---------------------- 190
           +   IL++ ISR   PD+ +WHF+  G+Y+V+SGY +A                      
Sbjct: 121 EASHILSILISRWGCPDKLIWHFSMHGQYTVRSGYELALHLQRNGELGRKGAGEASSSSS 180

Query: 191 -----KSIRDV------------------------------------------ETVNHAL 250
                KS+  V                                          ET  H  
Sbjct: 181 QSSVWKSVWHVDAPPKLKAFIWRGCSNILAVRHNLHRRSVPCTGECGFCGFQDETQAHIF 240

Query: 251 LECDPAKAFWFGSPLQLDTSKFNGLRFVTSWERICCGLEGKDHTEDALYFLSYGMWRVWK 286
            ECD A+AFWF SPLQLD SK  G  F+++W+ +   L   +H  +A+ +  +G+WR+WK
Sbjct: 241 FECDFARAFWFASPLQLDVSKLAGEDFISTWQHMMTTLNSSEHAAEAIQWFVFGLWRIWK 300

[Close]

BLAST of Lcy01g006470 vs. NCBI nr
Match: CAB4273082.1 (unnamed protein product [Prunus armeniaca])

HSP 1 Score: 193.0 bits (489), Expect = 3.6e-45
Identity = 104/345 (30.14%), Postives = 155/345 (44.93%), Query Frame = 0


Query: 1    MNFKDIHCFNLALLAKQGWRILKCLNSLLARIYRERYFRHGNFLEADIKGRASWGWRSIV 60
            M F+D+ CFNLA+LAK GWRIL+  NSLLAR+ +E+Y+ H +F+ A    + SWGW+ I+
Sbjct: 782  MGFRDLLCFNLAMLAKIGWRILRNPNSLLARLLQEKYYVHSDFMHAVCGRKVSWGWKGIL 841

Query: 61   AGREVLKQGFRWRVGAETKLNIWNDPWIPRPSTFKPLCCLNNTWQQVRDLLEVDGMKWRE 120
             GR +L+ G RWR+G    + I  D W+  PS         +    V +L++ +   W  
Sbjct: 842  QGRRILEAGLRWRIGNGENVCIQQDRWLTTPSPSLIHSRHLDMPLMVHELIDQNMRCWDM 901

Query: 121  ERLRSCLSPVDVDLILAMPISRRSLPDRAVWHFTNSGEYSVKSGYRMAKSIR-------- 180
            + +  C +P +   I  +PISR   PD+ VWH+T+ G Y+V+SGY +A ++R        
Sbjct: 902  DLVNRCFNPNEAKCISTIPISRWGCPDKKVWHYTSHGGYTVRSGYAVALTLRRNGELGRK 961

Query: 181  --------------------------------------------------DVET------ 240
                                                              DVET      
Sbjct: 962  AEGESSQGDKQRRIWKSIWGLQVPPKIRTFLWKCCRNVLAVKENLLHRGIDVETSCALCG 1021

Query: 241  -----VNHALLECDPAKAFWFGSPLQLDTSKFNGLRFVTSWERICCGLEGKDHTEDALYF 277
                   H   +C+ A+  WF SP+QLD     G  F+  WE +    E  +H  D L  
Sbjct: 1022 QEGESQVHVFFKCEFARLLWFASPIQLDPCHILGEDFIVCWENLLKKYEQVEHCNDILQV 1081

[Close]

BLAST of Lcy01g006470 vs. TAIR 10
Match: AT4G29090.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 127.1 bits (318), Expect = 2.3e-29
Identity = 92/343 (26.82%), Postives = 138/343 (40.23%), Query Frame = 0


Query: 1   MNFKDIHCFNLALLAKQGWRILKCLNSLLARIYRERYFRHGNFLEADIKGRASWGWRSIV 60
           + FKDI  FNLALL KQ WR+L    SL+A++++ RYF   + L A +  R S+ W+SI 
Sbjct: 56  IGFKDIEAFNLALLGKQMWRMLSRPESLMAKVFKSRYFHKSDPLNAPLGSRPSFVWKSIH 115

Query: 61  AGREVLKQGFRWRVGAETKLNIWNDPWIPRPSTFKPLCCLNNTWQQ---------VRDLL 120
           A +E+L+QG R  VG    + IW   W+        L       Q+         V DL+
Sbjct: 116 ASQEILRQGARAVVGNGEDIIIWRHKWLDSKPASAALRMQRVPPQEYASVSSILKVSDLI 175

Query: 121 EVDGMKWREERLRSCLSPVDVDLILAMPISRRSLPDRAVWHFTNSGEYSVKSGYRMAKSI 180
           +  G +WR++ +      V+  LI  +    R + D   W +T+SG+Y+VKSGY +   I
Sbjct: 176 DESGREWRKDVIEMLFPEVERKLIGELRPGGRRILDSYTWDYTSSGDYTVKSGYWVLTQI 235

Query: 181 RD---------------------------------------------------------- 240
            +                                                          
Sbjct: 236 INKRSSPQEVSEPSLNPIYQKIWKSQTSPKIQHFLWKCLSNSLPVAGALAYRHLSKESAC 295

Query: 241 ------VETVNHALLECDPAKAFWFGS--PLQLDTSKFNGLRFVTSWERICCGLEGKDHT 269
                  ETVNH L +C  A+  W  S  P+ L     + +     W  +     G    
Sbjct: 296 IRCPSCKETVNHLLFKCTFARLTWAISSIPIPLGGEWADSIYVNLYW--VFNLGNGNPQW 355

[Close]

BLAST of Lcy01g006470 vs. TAIR 10
Match: AT2G22440.1 (BEST Arabidopsis thaliana protein match is: Ribonuclease H-like superfamily protein (TAIR:AT4G29090.1); Has 208 Blast hits to 191 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 208; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 84.7 bits (208), Expect = 1.3e-16
Identity = 55/175 (31.43%), Postives = 83/175 (47.43%), Query Frame = 0


Query: 82  IWNDPWIP----RPSTFKPLCCLNNTWQQVRDLLEVDGMKWREERLRSCLSPVDVDLILA 141
           +W DPWIP    RP+  K +  + ++   V DL++ +   W+ +RL++ + PVD+ LIL 
Sbjct: 5   VWKDPWIPTILARPA--KSILNIRDSLLYVNDLIDQNTNLWKLDRLQALIDPVDIPLILG 64

Query: 142 MPISRRSLPDRAVWHFTNSGEYSVKSGYRMAKSIRDVETVNHALLECDPAKAFWFGSPLQ 201
           +  SR  L D   W  T SG Y+VKSGY +A+ +        +   CDP     F  P  
Sbjct: 65  IRPSRTYLSDGFSWSHTKSGNYTVKSGYWVARDL--------SRPTCDPP----FQGPGN 124

Query: 202 L--DTSKFNGLRFVTSWERICCGLEGKDHTEDALYFLSYGMWRVWKERNAMVFRN 251
           +    S F    F+  W     G+      E  L    + +W +WK +N  VF N
Sbjct: 125 IFPRNSLFYNFDFL-FWRDREFGI-----GEKVLELFPWIIWYIWKSKNRFVFEN 159

[Close]

BLAST of Lcy01g006470 vs. TAIR 10
Match: ATMG00310.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )

HSP 1 Score: 84.7 bits (208), Expect = 1.3e-16
Identity = 39/97 (40.21%), Postives = 58/97 (59.79%), Query Frame = 0


Query: 1   MNFKDIHCFNLALLAKQGWRILKCLNSLLARIYRERYFRHGNFLEADIKGRASWGWRSIV 60
           + F+D+  FN ALLAKQ +RI+   ++LL+R+ R RYF H + +E  +  R S+ WRSI+
Sbjct: 57  LGFRDLGWFNQALLAKQSFRIIHQPHTLLSRLLRSRYFPHSSMMECSVGTRPSYAWRSII 116

Query: 61  AGREVLKQGFRWRVGAETKLNIWNDPWIPRPSTFKPL 98
            GRE+L +G    +G      +W D WI   +   PL
Sbjct: 117 HGRELLSRGLLRTIGDGIHTKVWLDRWIMDETPLPPL 153

[Close]

BLAST of Lcy01g006470 vs. TAIR 10
Match: AT3G09510.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 68.2 bits (165), Expect = 1.3e-11
Identity = 37/140 (26.43%), Postives = 74/140 (52.86%), Query Frame = 0


Query: 34  RERYFRHGNFLEADIKGRASWGWRSIVAGREVLKQGFRWRVGAETKLNIWNDPWI----P 93
           + RYF+  + L+A ++ + S+GW S++ G  +LK+G R  +G    + I  D  +    P
Sbjct: 2   KARYFKDVSILDAKVRKQQSYGWASLLDGIALLKKGTRHLIGDGQNIRIGLDNIVDSHPP 61

Query: 94  RP----STFKPLCCLNNTWQQVRDLLEVDGMKWREERLRSCLSPVDVDLILAMPISRRSL 153
           RP     T+K +  +NN +++     +     W + ++   +   D   I  + +++   
Sbjct: 62  RPLNTEETYKEM-TINNLFER-----KGSYYFWDDSKISQFVDQSDHGFIHRIYLAKSKK 121

Query: 154 PDRAVWHFTNSGEYSVKSGY 166
           PD+ +W++  +GEY+V+SGY
Sbjct: 122 PDKIIWNYNTTGEYTVRSGY 135

The following BLAST results are available for this feature:

BLAST of Lcy01g006470 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P93295	1.8e-15	40.21	Uncharacterized mitochondrial protein AtMg00310 OS=Arabidopsis thaliana OX=3702 ...	[more]
P0C2F6	2.3e-10	30.73	Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1...	[more]

BLAST of Lcy01g006470 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J5WPU6	5.1e-53	31.36	Reverse transcriptase domain-containing protein OS=Prunus armeniaca OX=36596 GN=...	[more]
A0A6J5UE59	3.3e-52	32.54	Reverse transcriptase domain-containing protein OS=Prunus armeniaca OX=36596 GN=...	[more]
A0A6J5YDN0	1.2e-46	30.52	Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=ORAREDHAP_LOCUS50956 PE=...	[more]
A0A6J5UAY2	1.8e-45	30.14	Reverse transcriptase domain-containing protein OS=Prunus armeniaca OX=36596 GN=...	[more]
A0A4Y1R838	3.9e-45	32.18	Ribonuclease H-like superfamily protein OS=Prunus dulcis OX=3755 GN=Prudu_010255...	[more]

BLAST of Lcy01g006470 vs. NCBI nr


Match Name	E-value	Identity	Description
CAB4303756.1	1.1e-52	31.36	unnamed protein product [Prunus armeniaca]	[more]
CAB4274760.1	6.8e-52	32.54	unnamed protein product [Prunus armeniaca]	[more]
XP_028948114.1	4.1e-49	32.28	uncharacterized protein LOC114820933 [Malus domestica]	[more]
CAB4321714.1	2.5e-46	30.52	unnamed protein product [Prunus armeniaca]	[more]
CAB4273082.1	3.6e-45	30.14	unnamed protein product [Prunus armeniaca]	[more]

BLAST of Lcy01g006470 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G29090.1	2.3e-29	26.82	Ribonuclease H-like superfamily protein	[more]
AT2G22440.1	1.3e-16	31.43	BEST Arabidopsis thaliana protein match is: Ribonuclease H-like superfamily prot...	[more]
ATMG00310.1	1.3e-16	40.21	RNA-directed DNA polymerase (reverse transcriptase)-related family protein	[more]
AT3G09510.1	1.3e-11	26.43	Ribonuclease H-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33116	REVERSE TRANSCRIPTASE ZINC-BINDING DOMAIN-CONTAINING PROTEIN-RELATED-RELATED	coord: 2..170
None	No IPR available	PANTHER	PTHR33116:SF41	SUBFAMILY NOT NAMED	coord: 2..170

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy01g006470.1	Lcy01g006470.1	mRNA