Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTAAAAGGAAGAACCTTTGTCTGATTTCGGACCGACACAAGGGCATTATAGCAGCTGTACGAAACGCAAGCAACGGTTGGGCAGATGCGGAACATAGATTTTGTTTACGTCATGTTGCTAGTAATTTCAATGAAAGGTATAAGGATAAGTCATTGAAAAAACTAGTGTACCGCGCAGGTGCACAATTTCAAGTTGACAAGTACAAAGACTGCATGGCTGAGCTTGAAGTTGCCAACAAGGAATGCTTGCGATTCTTCAATTCTTTAGATCCCAAACAATGGACGCAATCACATGATGGTGGATACCGTTACGGCTGGCTAACCACAAATGTGGCAGAATGCGTGAACGGTATATTTAAAGGGGCCAGAAAGTTACCCATCGCTGCGTTGGTTGAAGCGACATTTTATCGTACAGTCAATTACTTCGCTAAACGTCGGATCGAAATAGAAGCTTCTATTCAAGAAGGACAACGATTCACGAGGTAATATTCCATGAATCATTACAAGTTAAATCGAATGTTTACGCTTGTACGAGATAGAGTAATAACTTTTTCTATACTTTTTAGGTATGCAATTGAGAAACTAACTACTTGGGAAGAACGCGCAAACAGACACGATGTGAATGTGTTCGACTATGGGAGAGGACGATGCGATATCACAACTGCGATCGATCCAATCACTTTGAAGGGTGGAACCAAACATAGGGTGAGATTGATTGAGAAGACATGCACATGCAATAAATGGCAAAGCTTTAAGATCCCATGCTCACACGCCATTGCTGCATGTAAAGAACGTTGCATAGATTACTTAAGCCTAATTGACTCCCACTATGAACTTCCAACGTACTTGTTGTGTTATGCACCTCAGTTTGAACCCATCCCTGAACACAGTCGCTGGCCAGATCCTGGTTTTCCCAAGATTTATCCCGATCCATCGTCCTTGAGAGCTCATGGTAGACCATGCTCTTCTCGTATACGCAACGAGATGGATTGGACGGAGCCGGTTGTCAAAACCCGTTGTGGGATTTGCAGACAAGAGGGACACAATCGAAGAAATTGTCCTAGTCGGGGTCCCAACACGTCATCGTAG
mRNA sequence
ATGGGTAAAAGGAAGAACCTTTGTCTGATTTCGGACCGACACAAGGGCATTATAGCAGCTGTACGAAACGCAAGCAACGGTTGGGCAGATGCGGAACATAGATTTTGTTTACGTCATGTTGCTAGTAATTTCAATGAAAGGTATAAGGATAAGTCATTGAAAAAACTAGTGTACCGCGCAGGTGCACAATTTCAAGTTGACAAGTACAAAGACTGCATGGCTGAGCTTGAAGTTGCCAACAAGGAATGCTTGCGATTCTTCAATTCTTTAGATCCCAAACAATGGACGCAATCACATGATGGTGGATACCGTTACGGCTGGCTAACCACAAATGTGGCAGAATGCGTGAACGGTATATTTAAAGGGGCCAGAAAGTTACCCATCGCTGCGTTGGTTGAAGCGACATTTTATCGTACAGTCAATTACTTCGCTAAACGTCGGATCGAAATAGAAGCTTCTATTCAAGAAGGACAACGATTCACGAGGTATGCAATTGAGAAACTAACTACTTGGGAAGAACGCGCAAACAGACACGATGTGAATGTGTTCGACTATGGGAGAGGACGATGCGATATCACAACTGCGATCGATCCAATCACTTTGAAGGGTGGAACCAAACATAGGGTGAGATTGATTGAGAAGACATGCACATGCAATAAATGGCAAAGCTTTAAGATCCCATGCTCACACGCCATTGCTGCATGTAAAGAACGTTGCATAGATTACTTAAGCCTAATTGACTCCCACTATGAACTTCCAACGTACTTGTTGTGTTATGCACCTCAGTTTGAACCCATCCCTGAACACAGTCGCTGGCCAGATCCTGGTTTTCCCAAGATTTATCCCGATCCATCGTCCTTGAGAGCTCATGGTAGACCATGCTCTTCTCGTATACGCAACGAGATGGATTGGACGGAGCCGGTTGTCAAAACCCGTTGTGGGATTTGCAGACAAGAGGGACACAATCGAAGAAATTGTCCTAGTCGGGGTCCCAACACGTCATCGTAG
Coding sequence (CDS)
ATGGGTAAAAGGAAGAACCTTTGTCTGATTTCGGACCGACACAAGGGCATTATAGCAGCTGTACGAAACGCAAGCAACGGTTGGGCAGATGCGGAACATAGATTTTGTTTACGTCATGTTGCTAGTAATTTCAATGAAAGGTATAAGGATAAGTCATTGAAAAAACTAGTGTACCGCGCAGGTGCACAATTTCAAGTTGACAAGTACAAAGACTGCATGGCTGAGCTTGAAGTTGCCAACAAGGAATGCTTGCGATTCTTCAATTCTTTAGATCCCAAACAATGGACGCAATCACATGATGGTGGATACCGTTACGGCTGGCTAACCACAAATGTGGCAGAATGCGTGAACGGTATATTTAAAGGGGCCAGAAAGTTACCCATCGCTGCGTTGGTTGAAGCGACATTTTATCGTACAGTCAATTACTTCGCTAAACGTCGGATCGAAATAGAAGCTTCTATTCAAGAAGGACAACGATTCACGAGGTATGCAATTGAGAAACTAACTACTTGGGAAGAACGCGCAAACAGACACGATGTGAATGTGTTCGACTATGGGAGAGGACGATGCGATATCACAACTGCGATCGATCCAATCACTTTGAAGGGTGGAACCAAACATAGGGTGAGATTGATTGAGAAGACATGCACATGCAATAAATGGCAAAGCTTTAAGATCCCATGCTCACACGCCATTGCTGCATGTAAAGAACGTTGCATAGATTACTTAAGCCTAATTGACTCCCACTATGAACTTCCAACGTACTTGTTGTGTTATGCACCTCAGTTTGAACCCATCCCTGAACACAGTCGCTGGCCAGATCCTGGTTTTCCCAAGATTTATCCCGATCCATCGTCCTTGAGAGCTCATGGTAGACCATGCTCTTCTCGTATACGCAACGAGATGGATTGGACGGAGCCGGTTGTCAAAACCCGTTGTGGGATTTGCAGACAAGAGGGACACAATCGAAGAAATTGTCCTAGTCGGGGTCCCAACACGTCATCGTAG
Protein sequence
MGKRKNLCLISDRHKGIIAAVRNASNGWADAEHRFCLRHVASNFNERYKDKSLKKLVYRAGAQFQVDKYKDCMAELEVANKECLRFFNSLDPKQWTQSHDGGYRYGWLTTNVAECVNGIFKGARKLPIAALVEATFYRTVNYFAKRRIEIEASIQEGQRFTRYAIEKLTTWEERANRHDVNVFDYGRGRCDITTAIDPITLKGGTKHRVRLIEKTCTCNKWQSFKIPCSHAIAACKERCIDYLSLIDSHYELPTYLLCYAPQFEPIPEHSRWPDPGFPKIYPDPSSLRAHGRPCSSRIRNEMDWTEPVVKTRCGICRQEGHNRRNCPSRGPNTSS
Homology
BLAST of Lcy01g005380 vs. ExPASy TrEMBL
Match:
A0A438EWG2 (SWIM-type domain-containing protein OS=Vitis vinifera OX=29760 GN=CK203_068088 PE=4 SV=1)
HSP 1 Score: 405.6 bits (1041), Expect = 2.0e-109
Identity = 184/336 (54.76%), Postives = 238/336 (70.83%), Query Frame = 0
Query: 3 KRKNLCLISDRHKGIIAAVRNASNGWAD--AEHRFCLRHVASNFNERYKDKSLKKLVYRA 62
+R+ +CLISDRH GI AA+R+ S GW+ A HR+CLRHVASNFN++Y++K LK LVYRA
Sbjct: 457 QREGICLISDRHAGIQAAIRDPSVGWSPPYAHHRYCLRHVASNFNDKYRNKMLKDLVYRA 516
Query: 63 GAQFQVDKYKDCMAELEVANKECLRFFNSLDPKQWTQSHDGGYRYGWLTTNVAECVNGIF 122
G+Q Q KY+ CM EL+ + +CL +F LD K+WT +HDGG+RYGW+TTN+AEC+NG+
Sbjct: 517 GSQHQPRKYEACMTELKRLDDKCLEWFKRLDTKKWTLAHDGGHRYGWMTTNIAECINGVL 576
Query: 123 KGARKLPIAALVEATFYRTVNYFAKRRIEIEASIQEGQRFTRYAIEKLTTWEERANRHDV 182
KGAR LPI ALV TFYR V+YF RR EI+ + G +T YAI K+T ++ RAN H
Sbjct: 577 KGARMLPITALVRLTFYRCVSYFETRRTEIQTQMANGDLYTSYAINKITKYQSRANGHTA 636
Query: 183 NVFDYGRGRCDITTAIDPITL-KGGTKHRVRLIEKTCTCNKWQSFKIPCSHAIAACKERC 242
N+F ++TTA + KG V+L E+TCTCNKWQSF IPCSH +A C
Sbjct: 637 NIFHRSNEIFEVTTAPHGFHMDKGNNIQIVKLKERTCTCNKWQSFGIPCSHVLAVCARAR 696
Query: 243 IDYLSLIDSHYELPTYLLCYAPQFEPIPEHSRWPDPGFPKIYPDPSSLRAHGRPCSSRIR 302
ID +D HY + Y CY PQF PIP + WP+P FP ++P+P+ +R GRP SSRIR
Sbjct: 697 IDSWQFVDKHYRMDVYACCYTPQFNPIPHQAYWPEPNFPIVHPNPNLVRDKGRPRSSRIR 756
Query: 303 NEMDWTEPVVKTRCGICRQEGHNRRNCPSRGPNTSS 336
NEMDW EP VK RCG+C+QEGHNRR CP+RG ++++
Sbjct: 757 NEMDWREPSVKLRCGLCKQEGHNRRKCPNRGESSNT 792
BLAST of Lcy01g005380 vs. ExPASy TrEMBL
Match:
A0A438KDW5 (SWIM-type domain-containing protein OS=Vitis vinifera OX=29760 GN=CK203_008540 PE=4 SV=1)
HSP 1 Score: 404.1 bits (1037), Expect = 5.9e-109
Identity = 183/336 (54.46%), Postives = 237/336 (70.54%), Query Frame = 0
Query: 3 KRKNLCLISDRHKGIIAAVRNASNGWAD--AEHRFCLRHVASNFNERYKDKSLKKLVYRA 62
+R+ +CLISDRH GI AA+R+ S GW+ A HR+CLRHVASNFN++Y++K LK LVYRA
Sbjct: 430 QREGICLISDRHAGIQAAIRDPSVGWSPPYAHHRYCLRHVASNFNDKYRNKMLKDLVYRA 489
Query: 63 GAQFQVDKYKDCMAELEVANKECLRFFNSLDPKQWTQSHDGGYRYGWLTTNVAECVNGIF 122
G+Q Q KY+ CM EL+ + +CL +F LD K+WT +HDGG+RYGW+TTN+ EC+NG+
Sbjct: 490 GSQHQPRKYEACMTELKRLDDKCLEWFKRLDTKKWTLAHDGGHRYGWMTTNIVECINGVL 549
Query: 123 KGARKLPIAALVEATFYRTVNYFAKRRIEIEASIQEGQRFTRYAIEKLTTWEERANRHDV 182
KGAR LPI ALV TFYR V+YF RR EI+ + G +T YAI K+T ++ RAN H
Sbjct: 550 KGARMLPITALVRLTFYRCVSYFETRRTEIQTQMANGDLYTSYAINKITKYQSRANGHTA 609
Query: 183 NVFDYGRGRCDITTAIDPITL-KGGTKHRVRLIEKTCTCNKWQSFKIPCSHAIAACKERC 242
N+F ++TTA + KG V+L E+TCTCNKWQSF IPCSH +A C
Sbjct: 610 NIFHRSNEIFEVTTAPHGFHMDKGNNIQIVKLKERTCTCNKWQSFGIPCSHVLAVCARAR 669
Query: 243 IDYLSLIDSHYELPTYLLCYAPQFEPIPEHSRWPDPGFPKIYPDPSSLRAHGRPCSSRIR 302
ID +D HY + Y CY PQF PIP + WP+P FP ++P+P+ +R GRP SSRIR
Sbjct: 670 IDSWQFVDKHYRMEVYACCYTPQFNPIPHQAYWPEPNFPIVHPNPNLVRDKGRPRSSRIR 729
Query: 303 NEMDWTEPVVKTRCGICRQEGHNRRNCPSRGPNTSS 336
NEMDW EP VK RCG+C+QEGHNRR CP+RG ++++
Sbjct: 730 NEMDWREPSVKLRCGLCKQEGHNRRKCPNRGESSNT 765
BLAST of Lcy01g005380 vs. ExPASy TrEMBL
Match:
A0A438HFK5 (SWIM-type domain-containing protein OS=Vitis vinifera OX=29760 GN=CK203_044939 PE=4 SV=1)
HSP 1 Score: 370.9 bits (951), Expect = 5.5e-99
Identity = 178/336 (52.98%), Postives = 232/336 (69.05%), Query Frame = 0
Query: 3 KRKNLCLISDRHKGIIAAVRNASNGWA--DAEHRFCLRHVASNFNERYKDKSLKKLVYRA 62
+R+ +CLISDRH GI AAVRN S GW+ A+HR+CLRHV SNFN+++K+K LK+L YRA
Sbjct: 512 QREGICLISDRHAGINAAVRNPSVGWSPPHAQHRYCLRHVVSNFNDKFKNKVLKELAYRA 571
Query: 63 GAQFQVDKYKDCMAELEVANKECLRFFNSLDPKQWTQSHDGGYRYGWLTTNVAECVNGIF 122
G Q Q KY+ M EL+ +++ + +F+ LD ++WTQ++D GYRYGW+TTN+AEC+NG+
Sbjct: 572 GCQHQPRKYERYMEELKRLDEKSVAWFSKLDTQKWTQAYDLGYRYGWMTTNIAECINGVL 631
Query: 123 KGARKLPIAALVEATFYRTVNYFAKRRIEIEASIQEGQRFTRYAIEKLTTWEERANRHDV 182
KGAR LPI ALV+ TFYR V+YF RR EI A + G +T YAIEK E +A+ H V
Sbjct: 632 KGARMLPITALVQLTFYRCVSYFETRRAEIRARMAVGDVYTAYAIEKFRRAEAKASGHTV 691
Query: 183 NVFDYGRGRCDITTAIDPITL-KGGTKHRVRLIEKTCTCNKWQSFKIPCSHAIAACKERC 242
+F ++ TA+ + KG K V+L E TC+CNKWQSF IPCSH +A
Sbjct: 692 TIFHRIHETFEVITALHGFHMDKGRNKQVVKLNEGTCSCNKWQSFGIPCSHVLAVSAHMR 751
Query: 243 IDYLSLIDSHYELPTYLLCYAPQFEPIPEHSRWPDPGFPKIYPDPSSLRAHGRPCSSRIR 302
ID L++ +Y L Y CYAP+F PIP S WP P FP ++PDP+S+R GRP SSRIR
Sbjct: 752 IDSWQLVEKYYRLDAYASCYAPEFNPIPHESYWPYPDFPILHPDPTSMRDKGRPRSSRIR 811
Query: 303 NEMDWTEPVVKTRCGICRQEGHNRRNCPSRGPNTSS 336
NEMD EP V+ RCG+C+ GHNRRNCP++ SS
Sbjct: 812 NEMDLKEPSVRIRCGLCKIAGHNRRNCPTKDGGQSS 847
BLAST of Lcy01g005380 vs. ExPASy TrEMBL
Match:
A0A438FUH8 (SWIM-type domain-containing protein OS=Vitis vinifera OX=29760 GN=CK203_057381 PE=4 SV=1)
HSP 1 Score: 370.9 bits (951), Expect = 5.5e-99
Identity = 178/336 (52.98%), Postives = 232/336 (69.05%), Query Frame = 0
Query: 3 KRKNLCLISDRHKGIIAAVRNASNGWA--DAEHRFCLRHVASNFNERYKDKSLKKLVYRA 62
+R+ +CLISDRH GI AAVRN S GW+ A+HR+CLRHV SNFN+++K+K LK+L YRA
Sbjct: 342 QREGICLISDRHAGINAAVRNPSVGWSPPHAQHRYCLRHVVSNFNDKFKNKVLKELAYRA 401
Query: 63 GAQFQVDKYKDCMAELEVANKECLRFFNSLDPKQWTQSHDGGYRYGWLTTNVAECVNGIF 122
G Q Q KY+ M EL+ +++ + +F+ LD ++WTQ++D GYRYGW+TTN+AEC+NG+
Sbjct: 402 GCQHQPRKYERYMEELKRLDEKSVAWFSKLDTQKWTQAYDLGYRYGWMTTNIAECINGVL 461
Query: 123 KGARKLPIAALVEATFYRTVNYFAKRRIEIEASIQEGQRFTRYAIEKLTTWEERANRHDV 182
KGAR LPI ALV+ TFYR V+YF RR EI A + G +T YAIEK E +A+ H V
Sbjct: 462 KGARMLPITALVQLTFYRCVSYFETRRAEIRARMAVGDVYTTYAIEKFRRAEAKASGHTV 521
Query: 183 NVFDYGRGRCDITTAIDPITL-KGGTKHRVRLIEKTCTCNKWQSFKIPCSHAIAACKERC 242
+F ++ TA+ + KG K V+L E TC+CNKWQSF IPCSH +A
Sbjct: 522 TIFHRIHETFEVITALHGFHMDKGRNKQVVKLNEGTCSCNKWQSFGIPCSHVLAVSAHMR 581
Query: 243 IDYLSLIDSHYELPTYLLCYAPQFEPIPEHSRWPDPGFPKIYPDPSSLRAHGRPCSSRIR 302
ID L++ +Y L Y CYAP+F PIP S WP P FP ++PDP+S+R GRP SSRIR
Sbjct: 582 IDSWQLVEKYYRLDAYASCYAPEFNPIPHESYWPYPDFPILHPDPTSMRDKGRPRSSRIR 641
Query: 303 NEMDWTEPVVKTRCGICRQEGHNRRNCPSRGPNTSS 336
NEMD EP V+ RCG+C+ GHNRRNCP++ SS
Sbjct: 642 NEMDLKEPSVRIRCGLCKIAGHNRRNCPTKDGGQSS 677
BLAST of Lcy01g005380 vs. ExPASy TrEMBL
Match:
A0A438E570 (SWIM-type domain-containing protein OS=Vitis vinifera OX=29760 GN=CK203_079903 PE=4 SV=1)
HSP 1 Score: 370.9 bits (951), Expect = 5.5e-99
Identity = 178/336 (52.98%), Postives = 232/336 (69.05%), Query Frame = 0
Query: 3 KRKNLCLISDRHKGIIAAVRNASNGWA--DAEHRFCLRHVASNFNERYKDKSLKKLVYRA 62
+R+ +CLISDRH GI AAVRN S GW+ A+HR+CLRHV SNFN+++K+K LK+L YRA
Sbjct: 309 QREGICLISDRHAGINAAVRNPSVGWSPPHAQHRYCLRHVVSNFNDKFKNKVLKELAYRA 368
Query: 63 GAQFQVDKYKDCMAELEVANKECLRFFNSLDPKQWTQSHDGGYRYGWLTTNVAECVNGIF 122
G Q Q KY+ M EL+ +++ + +F+ LD ++WTQ++D GYRYGW+TTN+AEC+NG+
Sbjct: 369 GCQHQPRKYERYMEELKRLDEKSVAWFSKLDTQKWTQAYDLGYRYGWMTTNIAECINGVL 428
Query: 123 KGARKLPIAALVEATFYRTVNYFAKRRIEIEASIQEGQRFTRYAIEKLTTWEERANRHDV 182
KGAR LPI ALV+ TFYR V+YF RR EI A + G +T YAIEK E +A+ H V
Sbjct: 429 KGARMLPITALVQLTFYRCVSYFETRRAEIRARMAVGDVYTAYAIEKFRRAEAKASGHTV 488
Query: 183 NVFDYGRGRCDITTAIDPITL-KGGTKHRVRLIEKTCTCNKWQSFKIPCSHAIAACKERC 242
+F ++ TA+ + KG K V+L E TC+CNKWQSF IPCSH +A
Sbjct: 489 TIFHRIHETFEVITALHGFHMDKGRNKQVVKLNEGTCSCNKWQSFGIPCSHVLAVSAHMR 548
Query: 243 IDYLSLIDSHYELPTYLLCYAPQFEPIPEHSRWPDPGFPKIYPDPSSLRAHGRPCSSRIR 302
ID L++ +Y L Y CYAP+F PIP S WP P FP ++PDP+S+R GRP SSRIR
Sbjct: 549 IDSWQLVEKYYRLDAYASCYAPEFNPIPHESYWPYPDFPILHPDPTSMRDKGRPRSSRIR 608
Query: 303 NEMDWTEPVVKTRCGICRQEGHNRRNCPSRGPNTSS 336
NEMD EP V+ RCG+C+ GHNRRNCP++ SS
Sbjct: 609 NEMDLKEPSVRIRCGLCKIAGHNRRNCPTKDGGQSS 644
BLAST of Lcy01g005380 vs. NCBI nr
Match:
RVW52006.1 (hypothetical protein CK203_068088 [Vitis vinifera])
HSP 1 Score: 405.6 bits (1041), Expect = 4.2e-109
Identity = 184/336 (54.76%), Postives = 238/336 (70.83%), Query Frame = 0
Query: 3 KRKNLCLISDRHKGIIAAVRNASNGWAD--AEHRFCLRHVASNFNERYKDKSLKKLVYRA 62
+R+ +CLISDRH GI AA+R+ S GW+ A HR+CLRHVASNFN++Y++K LK LVYRA
Sbjct: 457 QREGICLISDRHAGIQAAIRDPSVGWSPPYAHHRYCLRHVASNFNDKYRNKMLKDLVYRA 516
Query: 63 GAQFQVDKYKDCMAELEVANKECLRFFNSLDPKQWTQSHDGGYRYGWLTTNVAECVNGIF 122
G+Q Q KY+ CM EL+ + +CL +F LD K+WT +HDGG+RYGW+TTN+AEC+NG+
Sbjct: 517 GSQHQPRKYEACMTELKRLDDKCLEWFKRLDTKKWTLAHDGGHRYGWMTTNIAECINGVL 576
Query: 123 KGARKLPIAALVEATFYRTVNYFAKRRIEIEASIQEGQRFTRYAIEKLTTWEERANRHDV 182
KGAR LPI ALV TFYR V+YF RR EI+ + G +T YAI K+T ++ RAN H
Sbjct: 577 KGARMLPITALVRLTFYRCVSYFETRRTEIQTQMANGDLYTSYAINKITKYQSRANGHTA 636
Query: 183 NVFDYGRGRCDITTAIDPITL-KGGTKHRVRLIEKTCTCNKWQSFKIPCSHAIAACKERC 242
N+F ++TTA + KG V+L E+TCTCNKWQSF IPCSH +A C
Sbjct: 637 NIFHRSNEIFEVTTAPHGFHMDKGNNIQIVKLKERTCTCNKWQSFGIPCSHVLAVCARAR 696
Query: 243 IDYLSLIDSHYELPTYLLCYAPQFEPIPEHSRWPDPGFPKIYPDPSSLRAHGRPCSSRIR 302
ID +D HY + Y CY PQF PIP + WP+P FP ++P+P+ +R GRP SSRIR
Sbjct: 697 IDSWQFVDKHYRMDVYACCYTPQFNPIPHQAYWPEPNFPIVHPNPNLVRDKGRPRSSRIR 756
Query: 303 NEMDWTEPVVKTRCGICRQEGHNRRNCPSRGPNTSS 336
NEMDW EP VK RCG+C+QEGHNRR CP+RG ++++
Sbjct: 757 NEMDWREPSVKLRCGLCKQEGHNRRKCPNRGESSNT 792
BLAST of Lcy01g005380 vs. NCBI nr
Match:
RVX19406.1 (hypothetical protein CK203_008540 [Vitis vinifera])
HSP 1 Score: 404.1 bits (1037), Expect = 1.2e-108
Identity = 183/336 (54.46%), Postives = 237/336 (70.54%), Query Frame = 0
Query: 3 KRKNLCLISDRHKGIIAAVRNASNGWAD--AEHRFCLRHVASNFNERYKDKSLKKLVYRA 62
+R+ +CLISDRH GI AA+R+ S GW+ A HR+CLRHVASNFN++Y++K LK LVYRA
Sbjct: 430 QREGICLISDRHAGIQAAIRDPSVGWSPPYAHHRYCLRHVASNFNDKYRNKMLKDLVYRA 489
Query: 63 GAQFQVDKYKDCMAELEVANKECLRFFNSLDPKQWTQSHDGGYRYGWLTTNVAECVNGIF 122
G+Q Q KY+ CM EL+ + +CL +F LD K+WT +HDGG+RYGW+TTN+ EC+NG+
Sbjct: 490 GSQHQPRKYEACMTELKRLDDKCLEWFKRLDTKKWTLAHDGGHRYGWMTTNIVECINGVL 549
Query: 123 KGARKLPIAALVEATFYRTVNYFAKRRIEIEASIQEGQRFTRYAIEKLTTWEERANRHDV 182
KGAR LPI ALV TFYR V+YF RR EI+ + G +T YAI K+T ++ RAN H
Sbjct: 550 KGARMLPITALVRLTFYRCVSYFETRRTEIQTQMANGDLYTSYAINKITKYQSRANGHTA 609
Query: 183 NVFDYGRGRCDITTAIDPITL-KGGTKHRVRLIEKTCTCNKWQSFKIPCSHAIAACKERC 242
N+F ++TTA + KG V+L E+TCTCNKWQSF IPCSH +A C
Sbjct: 610 NIFHRSNEIFEVTTAPHGFHMDKGNNIQIVKLKERTCTCNKWQSFGIPCSHVLAVCARAR 669
Query: 243 IDYLSLIDSHYELPTYLLCYAPQFEPIPEHSRWPDPGFPKIYPDPSSLRAHGRPCSSRIR 302
ID +D HY + Y CY PQF PIP + WP+P FP ++P+P+ +R GRP SSRIR
Sbjct: 670 IDSWQFVDKHYRMEVYACCYTPQFNPIPHQAYWPEPNFPIVHPNPNLVRDKGRPRSSRIR 729
Query: 303 NEMDWTEPVVKTRCGICRQEGHNRRNCPSRGPNTSS 336
NEMDW EP VK RCG+C+QEGHNRR CP+RG ++++
Sbjct: 730 NEMDWREPSVKLRCGLCKQEGHNRRKCPNRGESSNT 765
BLAST of Lcy01g005380 vs. NCBI nr
Match:
RVW83159.1 (hypothetical protein CK203_044939 [Vitis vinifera])
HSP 1 Score: 370.9 bits (951), Expect = 1.1e-98
Identity = 178/336 (52.98%), Postives = 232/336 (69.05%), Query Frame = 0
Query: 3 KRKNLCLISDRHKGIIAAVRNASNGWA--DAEHRFCLRHVASNFNERYKDKSLKKLVYRA 62
+R+ +CLISDRH GI AAVRN S GW+ A+HR+CLRHV SNFN+++K+K LK+L YRA
Sbjct: 512 QREGICLISDRHAGINAAVRNPSVGWSPPHAQHRYCLRHVVSNFNDKFKNKVLKELAYRA 571
Query: 63 GAQFQVDKYKDCMAELEVANKECLRFFNSLDPKQWTQSHDGGYRYGWLTTNVAECVNGIF 122
G Q Q KY+ M EL+ +++ + +F+ LD ++WTQ++D GYRYGW+TTN+AEC+NG+
Sbjct: 572 GCQHQPRKYERYMEELKRLDEKSVAWFSKLDTQKWTQAYDLGYRYGWMTTNIAECINGVL 631
Query: 123 KGARKLPIAALVEATFYRTVNYFAKRRIEIEASIQEGQRFTRYAIEKLTTWEERANRHDV 182
KGAR LPI ALV+ TFYR V+YF RR EI A + G +T YAIEK E +A+ H V
Sbjct: 632 KGARMLPITALVQLTFYRCVSYFETRRAEIRARMAVGDVYTAYAIEKFRRAEAKASGHTV 691
Query: 183 NVFDYGRGRCDITTAIDPITL-KGGTKHRVRLIEKTCTCNKWQSFKIPCSHAIAACKERC 242
+F ++ TA+ + KG K V+L E TC+CNKWQSF IPCSH +A
Sbjct: 692 TIFHRIHETFEVITALHGFHMDKGRNKQVVKLNEGTCSCNKWQSFGIPCSHVLAVSAHMR 751
Query: 243 IDYLSLIDSHYELPTYLLCYAPQFEPIPEHSRWPDPGFPKIYPDPSSLRAHGRPCSSRIR 302
ID L++ +Y L Y CYAP+F PIP S WP P FP ++PDP+S+R GRP SSRIR
Sbjct: 752 IDSWQLVEKYYRLDAYASCYAPEFNPIPHESYWPYPDFPILHPDPTSMRDKGRPRSSRIR 811
Query: 303 NEMDWTEPVVKTRCGICRQEGHNRRNCPSRGPNTSS 336
NEMD EP V+ RCG+C+ GHNRRNCP++ SS
Sbjct: 812 NEMDLKEPSVRIRCGLCKIAGHNRRNCPTKDGGQSS 847
BLAST of Lcy01g005380 vs. NCBI nr
Match:
RVW42770.1 (hypothetical protein CK203_079903 [Vitis vinifera])
HSP 1 Score: 370.9 bits (951), Expect = 1.1e-98
Identity = 178/336 (52.98%), Postives = 232/336 (69.05%), Query Frame = 0
Query: 3 KRKNLCLISDRHKGIIAAVRNASNGWA--DAEHRFCLRHVASNFNERYKDKSLKKLVYRA 62
+R+ +CLISDRH GI AAVRN S GW+ A+HR+CLRHV SNFN+++K+K LK+L YRA
Sbjct: 309 QREGICLISDRHAGINAAVRNPSVGWSPPHAQHRYCLRHVVSNFNDKFKNKVLKELAYRA 368
Query: 63 GAQFQVDKYKDCMAELEVANKECLRFFNSLDPKQWTQSHDGGYRYGWLTTNVAECVNGIF 122
G Q Q KY+ M EL+ +++ + +F+ LD ++WTQ++D GYRYGW+TTN+AEC+NG+
Sbjct: 369 GCQHQPRKYERYMEELKRLDEKSVAWFSKLDTQKWTQAYDLGYRYGWMTTNIAECINGVL 428
Query: 123 KGARKLPIAALVEATFYRTVNYFAKRRIEIEASIQEGQRFTRYAIEKLTTWEERANRHDV 182
KGAR LPI ALV+ TFYR V+YF RR EI A + G +T YAIEK E +A+ H V
Sbjct: 429 KGARMLPITALVQLTFYRCVSYFETRRAEIRARMAVGDVYTAYAIEKFRRAEAKASGHTV 488
Query: 183 NVFDYGRGRCDITTAIDPITL-KGGTKHRVRLIEKTCTCNKWQSFKIPCSHAIAACKERC 242
+F ++ TA+ + KG K V+L E TC+CNKWQSF IPCSH +A
Sbjct: 489 TIFHRIHETFEVITALHGFHMDKGRNKQVVKLNEGTCSCNKWQSFGIPCSHVLAVSAHMR 548
Query: 243 IDYLSLIDSHYELPTYLLCYAPQFEPIPEHSRWPDPGFPKIYPDPSSLRAHGRPCSSRIR 302
ID L++ +Y L Y CYAP+F PIP S WP P FP ++PDP+S+R GRP SSRIR
Sbjct: 549 IDSWQLVEKYYRLDAYASCYAPEFNPIPHESYWPYPDFPILHPDPTSMRDKGRPRSSRIR 608
Query: 303 NEMDWTEPVVKTRCGICRQEGHNRRNCPSRGPNTSS 336
NEMD EP V+ RCG+C+ GHNRRNCP++ SS
Sbjct: 609 NEMDLKEPSVRIRCGLCKIAGHNRRNCPTKDGGQSS 644
BLAST of Lcy01g005380 vs. NCBI nr
Match:
RVW63588.1 (hypothetical protein CK203_057381 [Vitis vinifera])
HSP 1 Score: 370.9 bits (951), Expect = 1.1e-98
Identity = 178/336 (52.98%), Postives = 232/336 (69.05%), Query Frame = 0
Query: 3 KRKNLCLISDRHKGIIAAVRNASNGWA--DAEHRFCLRHVASNFNERYKDKSLKKLVYRA 62
+R+ +CLISDRH GI AAVRN S GW+ A+HR+CLRHV SNFN+++K+K LK+L YRA
Sbjct: 342 QREGICLISDRHAGINAAVRNPSVGWSPPHAQHRYCLRHVVSNFNDKFKNKVLKELAYRA 401
Query: 63 GAQFQVDKYKDCMAELEVANKECLRFFNSLDPKQWTQSHDGGYRYGWLTTNVAECVNGIF 122
G Q Q KY+ M EL+ +++ + +F+ LD ++WTQ++D GYRYGW+TTN+AEC+NG+
Sbjct: 402 GCQHQPRKYERYMEELKRLDEKSVAWFSKLDTQKWTQAYDLGYRYGWMTTNIAECINGVL 461
Query: 123 KGARKLPIAALVEATFYRTVNYFAKRRIEIEASIQEGQRFTRYAIEKLTTWEERANRHDV 182
KGAR LPI ALV+ TFYR V+YF RR EI A + G +T YAIEK E +A+ H V
Sbjct: 462 KGARMLPITALVQLTFYRCVSYFETRRAEIRARMAVGDVYTTYAIEKFRRAEAKASGHTV 521
Query: 183 NVFDYGRGRCDITTAIDPITL-KGGTKHRVRLIEKTCTCNKWQSFKIPCSHAIAACKERC 242
+F ++ TA+ + KG K V+L E TC+CNKWQSF IPCSH +A
Sbjct: 522 TIFHRIHETFEVITALHGFHMDKGRNKQVVKLNEGTCSCNKWQSFGIPCSHVLAVSAHMR 581
Query: 243 IDYLSLIDSHYELPTYLLCYAPQFEPIPEHSRWPDPGFPKIYPDPSSLRAHGRPCSSRIR 302
ID L++ +Y L Y CYAP+F PIP S WP P FP ++PDP+S+R GRP SSRIR
Sbjct: 582 IDSWQLVEKYYRLDAYASCYAPEFNPIPHESYWPYPDFPILHPDPTSMRDKGRPRSSRIR 641
Query: 303 NEMDWTEPVVKTRCGICRQEGHNRRNCPSRGPNTSS 336
NEMD EP V+ RCG+C+ GHNRRNCP++ SS
Sbjct: 642 NEMDLKEPSVRIRCGLCKIAGHNRRNCPTKDGGQSS 677
BLAST of Lcy01g005380 vs. TAIR 10
Match:
AT1G49920.1 (MuDR family transposase )
HSP 1 Score: 136.7 bits (343), Expect = 3.4e-32
Identity = 87/290 (30.00%), Postives = 141/290 (48.62%), Query Frame = 0
Query: 3 KRKNLCLISDRHKGIIAAVRNASNGWAD--AEHRFCLRHVASNFNERYK--DKSLKKLVY 62
+R+ +CLIS I+A + + W + A HRFCL H+ S D ++ LV
Sbjct: 438 QRQGICLISSPDPDILAVINEPGSQWKEPWAYHRFCLYHLCSKLCSVSPGFDYNMHFLVD 497
Query: 63 RAGAQFQVDKYKDCMAELEVANKECLRFFNSLDPKQWTQSHDGGYRYGWLTTNVAECVNG 122
AG+ Q +++ M E++ N E ++ + P QW +HD G RYG + + E +
Sbjct: 498 EAGSSSQKEEFDSYMKEIKERNPEAWKWLDQFPPHQWALAHDDGRRYGIMRID-TEALFA 557
Query: 123 IFKGARKLPIAALVEATFYRTVNYFAKRRIEIEASIQEGQRFTRYAIEKLTTWEERANRH 182
+ K RK+ +A V F + + FA+ S++ G +T + +EKL +E ++
Sbjct: 558 VCKRFRKVAMAGGVMLLFGQLKDAFAESFKLSRGSLKHGDVYTEHVMEKLEEFETDSDTW 617
Query: 183 DVNVFDYGRGRCDITTAIDPITLKGG-----TKHRVRLIEKTCTCNKWQSFKIPCSHAIA 242
+ + R ++ A T G T V+L + TCTC ++Q K PC HA+A
Sbjct: 618 VITITPLERDAYQVSMAPKKKTRLMGQSNDSTSGIVQLNDTTCTCGEFQKNKFPCLHALA 677
Query: 243 ACKERCIDYLSLIDSHYELPTYLLCYAPQFEPIPEHSRWPDP-GFPKIYP 283
C E I+ L +D Y + Y Y+ +F P+PE S WP+ G P + P
Sbjct: 678 VCDELKINPLQYVDDCYTVERYHKTYSAKFSPVPELSAWPEAYGVPTLIP 726
BLAST of Lcy01g005380 vs. TAIR 10
Match:
AT1G64260.1 (MuDR family transposase )
HSP 1 Score: 124.4 bits (311), Expect = 1.7e-28
Identity = 81/290 (27.93%), Postives = 143/290 (49.31%), Query Frame = 0
Query: 3 KRKNLCLISDRHKGIIAAVRNASNGWAD--AEHRFCLRHVASNFNERYKDKSLKKLVYRA 62
+RK+LCLIS + I+A V + W + A H+FCL H+ S F ++D +L+ LV +A
Sbjct: 435 QRKDLCLISSPLRDIVAVVNEPGSLWQEPWAHHKFCLNHLRSQFLGVFRDYNLESLVEQA 494
Query: 63 GAQFQVDKYKDCMAELEVANKECLRFFNSLDPKQWTQSHDGGYRYGWLTTNVAECVNGIF 122
G+ Q +++ M +++ N E ++ + + +W +HD G RYG + + E + +
Sbjct: 495 GSTNQKEEFDSYMNDIKEKNPEAWKWLDQIPRHKWALAHDSGLRYGIIEID-REALFAVC 554
Query: 123 KGARKLPIAAL--VEATFYRTVNYFAKRRIEIEASIQEGQRFTRYAIEKLTTWEERANRH 182
+G +A V F + F K I +S+ G +T ++KL + + +
Sbjct: 555 RGFPYCTVAMTGGVMLMFDELRSSFDKSLSSIYSSLNRGVVYTEPFMDKLEEFMTDSIPY 614
Query: 183 DVNVFDYGRGRCDITTAIDPITLKGGTKHRVRLIEKTCTCNKWQSFKIPCSHAIAACKER 242
+ + R ++ + + + V+L TCTC K+QS+K PC HA+A ++
Sbjct: 615 VITQLE--RDSFKVSESSEK------EEWIVQLNVSTCTCRKFQSYKFPCLHALAVFEKL 674
Query: 243 CIDYLSLIDSHYELPTYLLCYAPQFEPIPEHSRWP-DPGFPKIYPDPSSL 288
I+ L +D Y + Y YA F P+P+ + WP D P ++P L
Sbjct: 675 KINPLQYVDECYTVEQYCKTYAATFSPVPDVAAWPEDCRVPTLFPPSQQL 715
BLAST of Lcy01g005380 vs. TAIR 10
Match:
AT1G64255.1 (MuDR family transposase )
HSP 1 Score: 123.2 bits (308), Expect = 3.8e-28
Identity = 85/285 (29.82%), Postives = 131/285 (45.96%), Query Frame = 0
Query: 3 KRKNLCLISDRHKGIIAAVRNASNGWAD--AEHRFCLRHVASNFNERYKDKSLKKLVYRA 62
+RK LCLIS H IIA V + + W + A HRF L H S F+ + L + RA
Sbjct: 442 QRKGLCLISSPHPDIIAVVNESGSQWQEPWAYHRFSLNHFYSQFSRVFPSFCLGARIRRA 501
Query: 63 GAQFQVDKYKDCMAELEVANKECLRFFNSLDPKQWTQSHDGGYRYGWLTTNVAE--CVNG 122
G+ Q D++ M +++ N E ++ + +W +HD G RYG + N V
Sbjct: 502 GSTSQKDEFVSYMNDIKEKNPEARKWLDQFPQNRWALAHDNGRRYGIMEINTKALFAVCN 561
Query: 123 IFKGARKLPIAALVEATFYRTVNYFAKRRIEIEASIQEGQRFTRYAIEKLTTWEERANRH 182
F+ A + + V F + F K +S+ G +T ++KL + +
Sbjct: 562 AFEQAGHV-VTGSVLLLFDELRSKFDKSFSCSRSSLNCGDVYTEPVMDKLEEFRTTFVTY 621
Query: 183 DVNVFDYGRGRCDITTAIDPITLKGGTKHRVRLIEKTCTCNKWQSFKIPCSHAIAACKER 242
V + TA+D KG + V+L + +CTC +Q +K PC HA+A CK+
Sbjct: 622 SYIVTPLDNNAFQVATALD----KG--ECIVQLSDCSCTCGDFQRYKFPCLHALAVCKKL 681
Query: 243 CIDYLSLIDSHYELPTYLLCYAPQFEPIPEHSRWPD-PGFPKIYP 283
+ L +D Y L YA F +PE S WP+ G P++ P
Sbjct: 682 KFNPLQYVDDCYTLERLKRTYATIFSHVPEMSAWPEASGVPRLLP 719
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A438EWG2 | 2.0e-109 | 54.76 | SWIM-type domain-containing protein OS=Vitis vinifera OX=29760 GN=CK203_068088 P... | [more] |
A0A438KDW5 | 5.9e-109 | 54.46 | SWIM-type domain-containing protein OS=Vitis vinifera OX=29760 GN=CK203_008540 P... | [more] |
A0A438HFK5 | 5.5e-99 | 52.98 | SWIM-type domain-containing protein OS=Vitis vinifera OX=29760 GN=CK203_044939 P... | [more] |
A0A438FUH8 | 5.5e-99 | 52.98 | SWIM-type domain-containing protein OS=Vitis vinifera OX=29760 GN=CK203_057381 P... | [more] |
A0A438E570 | 5.5e-99 | 52.98 | SWIM-type domain-containing protein OS=Vitis vinifera OX=29760 GN=CK203_079903 P... | [more] |
Match Name | E-value | Identity | Description | |
RVW52006.1 | 4.2e-109 | 54.76 | hypothetical protein CK203_068088 [Vitis vinifera] | [more] |
RVX19406.1 | 1.2e-108 | 54.46 | hypothetical protein CK203_008540 [Vitis vinifera] | [more] |
RVW83159.1 | 1.1e-98 | 52.98 | hypothetical protein CK203_044939 [Vitis vinifera] | [more] |
RVW42770.1 | 1.1e-98 | 52.98 | hypothetical protein CK203_079903 [Vitis vinifera] | [more] |
RVW63588.1 | 1.1e-98 | 52.98 | hypothetical protein CK203_057381 [Vitis vinifera] | [more] |