Lcy01g005380 (gene) Sponge gourd (P93075) v1

Overview
NameLcy01g005380
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionSWIM-type domain-containing protein
LocationChr01: 7447887 .. 7448978 (-)
RNA-Seq ExpressionLcy01g005380
SyntenyLcy01g005380
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTAAAAGGAAGAACCTTTGTCTGATTTCGGACCGACACAAGGGCATTATAGCAGCTGTACGAAACGCAAGCAACGGTTGGGCAGATGCGGAACATAGATTTTGTTTACGTCATGTTGCTAGTAATTTCAATGAAAGGTATAAGGATAAGTCATTGAAAAAACTAGTGTACCGCGCAGGTGCACAATTTCAAGTTGACAAGTACAAAGACTGCATGGCTGAGCTTGAAGTTGCCAACAAGGAATGCTTGCGATTCTTCAATTCTTTAGATCCCAAACAATGGACGCAATCACATGATGGTGGATACCGTTACGGCTGGCTAACCACAAATGTGGCAGAATGCGTGAACGGTATATTTAAAGGGGCCAGAAAGTTACCCATCGCTGCGTTGGTTGAAGCGACATTTTATCGTACAGTCAATTACTTCGCTAAACGTCGGATCGAAATAGAAGCTTCTATTCAAGAAGGACAACGATTCACGAGGTAATATTCCATGAATCATTACAAGTTAAATCGAATGTTTACGCTTGTACGAGATAGAGTAATAACTTTTTCTATACTTTTTAGGTATGCAATTGAGAAACTAACTACTTGGGAAGAACGCGCAAACAGACACGATGTGAATGTGTTCGACTATGGGAGAGGACGATGCGATATCACAACTGCGATCGATCCAATCACTTTGAAGGGTGGAACCAAACATAGGGTGAGATTGATTGAGAAGACATGCACATGCAATAAATGGCAAAGCTTTAAGATCCCATGCTCACACGCCATTGCTGCATGTAAAGAACGTTGCATAGATTACTTAAGCCTAATTGACTCCCACTATGAACTTCCAACGTACTTGTTGTGTTATGCACCTCAGTTTGAACCCATCCCTGAACACAGTCGCTGGCCAGATCCTGGTTTTCCCAAGATTTATCCCGATCCATCGTCCTTGAGAGCTCATGGTAGACCATGCTCTTCTCGTATACGCAACGAGATGGATTGGACGGAGCCGGTTGTCAAAACCCGTTGTGGGATTTGCAGACAAGAGGGACACAATCGAAGAAATTGTCCTAGTCGGGGTCCCAACACGTCATCGTAG

mRNA sequence

ATGGGTAAAAGGAAGAACCTTTGTCTGATTTCGGACCGACACAAGGGCATTATAGCAGCTGTACGAAACGCAAGCAACGGTTGGGCAGATGCGGAACATAGATTTTGTTTACGTCATGTTGCTAGTAATTTCAATGAAAGGTATAAGGATAAGTCATTGAAAAAACTAGTGTACCGCGCAGGTGCACAATTTCAAGTTGACAAGTACAAAGACTGCATGGCTGAGCTTGAAGTTGCCAACAAGGAATGCTTGCGATTCTTCAATTCTTTAGATCCCAAACAATGGACGCAATCACATGATGGTGGATACCGTTACGGCTGGCTAACCACAAATGTGGCAGAATGCGTGAACGGTATATTTAAAGGGGCCAGAAAGTTACCCATCGCTGCGTTGGTTGAAGCGACATTTTATCGTACAGTCAATTACTTCGCTAAACGTCGGATCGAAATAGAAGCTTCTATTCAAGAAGGACAACGATTCACGAGGTATGCAATTGAGAAACTAACTACTTGGGAAGAACGCGCAAACAGACACGATGTGAATGTGTTCGACTATGGGAGAGGACGATGCGATATCACAACTGCGATCGATCCAATCACTTTGAAGGGTGGAACCAAACATAGGGTGAGATTGATTGAGAAGACATGCACATGCAATAAATGGCAAAGCTTTAAGATCCCATGCTCACACGCCATTGCTGCATGTAAAGAACGTTGCATAGATTACTTAAGCCTAATTGACTCCCACTATGAACTTCCAACGTACTTGTTGTGTTATGCACCTCAGTTTGAACCCATCCCTGAACACAGTCGCTGGCCAGATCCTGGTTTTCCCAAGATTTATCCCGATCCATCGTCCTTGAGAGCTCATGGTAGACCATGCTCTTCTCGTATACGCAACGAGATGGATTGGACGGAGCCGGTTGTCAAAACCCGTTGTGGGATTTGCAGACAAGAGGGACACAATCGAAGAAATTGTCCTAGTCGGGGTCCCAACACGTCATCGTAG

Coding sequence (CDS)

ATGGGTAAAAGGAAGAACCTTTGTCTGATTTCGGACCGACACAAGGGCATTATAGCAGCTGTACGAAACGCAAGCAACGGTTGGGCAGATGCGGAACATAGATTTTGTTTACGTCATGTTGCTAGTAATTTCAATGAAAGGTATAAGGATAAGTCATTGAAAAAACTAGTGTACCGCGCAGGTGCACAATTTCAAGTTGACAAGTACAAAGACTGCATGGCTGAGCTTGAAGTTGCCAACAAGGAATGCTTGCGATTCTTCAATTCTTTAGATCCCAAACAATGGACGCAATCACATGATGGTGGATACCGTTACGGCTGGCTAACCACAAATGTGGCAGAATGCGTGAACGGTATATTTAAAGGGGCCAGAAAGTTACCCATCGCTGCGTTGGTTGAAGCGACATTTTATCGTACAGTCAATTACTTCGCTAAACGTCGGATCGAAATAGAAGCTTCTATTCAAGAAGGACAACGATTCACGAGGTATGCAATTGAGAAACTAACTACTTGGGAAGAACGCGCAAACAGACACGATGTGAATGTGTTCGACTATGGGAGAGGACGATGCGATATCACAACTGCGATCGATCCAATCACTTTGAAGGGTGGAACCAAACATAGGGTGAGATTGATTGAGAAGACATGCACATGCAATAAATGGCAAAGCTTTAAGATCCCATGCTCACACGCCATTGCTGCATGTAAAGAACGTTGCATAGATTACTTAAGCCTAATTGACTCCCACTATGAACTTCCAACGTACTTGTTGTGTTATGCACCTCAGTTTGAACCCATCCCTGAACACAGTCGCTGGCCAGATCCTGGTTTTCCCAAGATTTATCCCGATCCATCGTCCTTGAGAGCTCATGGTAGACCATGCTCTTCTCGTATACGCAACGAGATGGATTGGACGGAGCCGGTTGTCAAAACCCGTTGTGGGATTTGCAGACAAGAGGGACACAATCGAAGAAATTGTCCTAGTCGGGGTCCCAACACGTCATCGTAG

Protein sequence

MGKRKNLCLISDRHKGIIAAVRNASNGWADAEHRFCLRHVASNFNERYKDKSLKKLVYRAGAQFQVDKYKDCMAELEVANKECLRFFNSLDPKQWTQSHDGGYRYGWLTTNVAECVNGIFKGARKLPIAALVEATFYRTVNYFAKRRIEIEASIQEGQRFTRYAIEKLTTWEERANRHDVNVFDYGRGRCDITTAIDPITLKGGTKHRVRLIEKTCTCNKWQSFKIPCSHAIAACKERCIDYLSLIDSHYELPTYLLCYAPQFEPIPEHSRWPDPGFPKIYPDPSSLRAHGRPCSSRIRNEMDWTEPVVKTRCGICRQEGHNRRNCPSRGPNTSS
Homology
BLAST of Lcy01g005380 vs. ExPASy TrEMBL
Match: A0A438EWG2 (SWIM-type domain-containing protein OS=Vitis vinifera OX=29760 GN=CK203_068088 PE=4 SV=1)

HSP 1 Score: 405.6 bits (1041), Expect = 2.0e-109
Identity = 184/336 (54.76%), Postives = 238/336 (70.83%), Query Frame = 0

Query: 3   KRKNLCLISDRHKGIIAAVRNASNGWAD--AEHRFCLRHVASNFNERYKDKSLKKLVYRA 62
           +R+ +CLISDRH GI AA+R+ S GW+   A HR+CLRHVASNFN++Y++K LK LVYRA
Sbjct: 457 QREGICLISDRHAGIQAAIRDPSVGWSPPYAHHRYCLRHVASNFNDKYRNKMLKDLVYRA 516

Query: 63  GAQFQVDKYKDCMAELEVANKECLRFFNSLDPKQWTQSHDGGYRYGWLTTNVAECVNGIF 122
           G+Q Q  KY+ CM EL+  + +CL +F  LD K+WT +HDGG+RYGW+TTN+AEC+NG+ 
Sbjct: 517 GSQHQPRKYEACMTELKRLDDKCLEWFKRLDTKKWTLAHDGGHRYGWMTTNIAECINGVL 576

Query: 123 KGARKLPIAALVEATFYRTVNYFAKRRIEIEASIQEGQRFTRYAIEKLTTWEERANRHDV 182
           KGAR LPI ALV  TFYR V+YF  RR EI+  +  G  +T YAI K+T ++ RAN H  
Sbjct: 577 KGARMLPITALVRLTFYRCVSYFETRRTEIQTQMANGDLYTSYAINKITKYQSRANGHTA 636

Query: 183 NVFDYGRGRCDITTAIDPITL-KGGTKHRVRLIEKTCTCNKWQSFKIPCSHAIAACKERC 242
           N+F       ++TTA     + KG     V+L E+TCTCNKWQSF IPCSH +A C    
Sbjct: 637 NIFHRSNEIFEVTTAPHGFHMDKGNNIQIVKLKERTCTCNKWQSFGIPCSHVLAVCARAR 696

Query: 243 IDYLSLIDSHYELPTYLLCYAPQFEPIPEHSRWPDPGFPKIYPDPSSLRAHGRPCSSRIR 302
           ID    +D HY +  Y  CY PQF PIP  + WP+P FP ++P+P+ +R  GRP SSRIR
Sbjct: 697 IDSWQFVDKHYRMDVYACCYTPQFNPIPHQAYWPEPNFPIVHPNPNLVRDKGRPRSSRIR 756

Query: 303 NEMDWTEPVVKTRCGICRQEGHNRRNCPSRGPNTSS 336
           NEMDW EP VK RCG+C+QEGHNRR CP+RG ++++
Sbjct: 757 NEMDWREPSVKLRCGLCKQEGHNRRKCPNRGESSNT 792

BLAST of Lcy01g005380 vs. ExPASy TrEMBL
Match: A0A438KDW5 (SWIM-type domain-containing protein OS=Vitis vinifera OX=29760 GN=CK203_008540 PE=4 SV=1)

HSP 1 Score: 404.1 bits (1037), Expect = 5.9e-109
Identity = 183/336 (54.46%), Postives = 237/336 (70.54%), Query Frame = 0

Query: 3   KRKNLCLISDRHKGIIAAVRNASNGWAD--AEHRFCLRHVASNFNERYKDKSLKKLVYRA 62
           +R+ +CLISDRH GI AA+R+ S GW+   A HR+CLRHVASNFN++Y++K LK LVYRA
Sbjct: 430 QREGICLISDRHAGIQAAIRDPSVGWSPPYAHHRYCLRHVASNFNDKYRNKMLKDLVYRA 489

Query: 63  GAQFQVDKYKDCMAELEVANKECLRFFNSLDPKQWTQSHDGGYRYGWLTTNVAECVNGIF 122
           G+Q Q  KY+ CM EL+  + +CL +F  LD K+WT +HDGG+RYGW+TTN+ EC+NG+ 
Sbjct: 490 GSQHQPRKYEACMTELKRLDDKCLEWFKRLDTKKWTLAHDGGHRYGWMTTNIVECINGVL 549

Query: 123 KGARKLPIAALVEATFYRTVNYFAKRRIEIEASIQEGQRFTRYAIEKLTTWEERANRHDV 182
           KGAR LPI ALV  TFYR V+YF  RR EI+  +  G  +T YAI K+T ++ RAN H  
Sbjct: 550 KGARMLPITALVRLTFYRCVSYFETRRTEIQTQMANGDLYTSYAINKITKYQSRANGHTA 609

Query: 183 NVFDYGRGRCDITTAIDPITL-KGGTKHRVRLIEKTCTCNKWQSFKIPCSHAIAACKERC 242
           N+F       ++TTA     + KG     V+L E+TCTCNKWQSF IPCSH +A C    
Sbjct: 610 NIFHRSNEIFEVTTAPHGFHMDKGNNIQIVKLKERTCTCNKWQSFGIPCSHVLAVCARAR 669

Query: 243 IDYLSLIDSHYELPTYLLCYAPQFEPIPEHSRWPDPGFPKIYPDPSSLRAHGRPCSSRIR 302
           ID    +D HY +  Y  CY PQF PIP  + WP+P FP ++P+P+ +R  GRP SSRIR
Sbjct: 670 IDSWQFVDKHYRMEVYACCYTPQFNPIPHQAYWPEPNFPIVHPNPNLVRDKGRPRSSRIR 729

Query: 303 NEMDWTEPVVKTRCGICRQEGHNRRNCPSRGPNTSS 336
           NEMDW EP VK RCG+C+QEGHNRR CP+RG ++++
Sbjct: 730 NEMDWREPSVKLRCGLCKQEGHNRRKCPNRGESSNT 765

BLAST of Lcy01g005380 vs. ExPASy TrEMBL
Match: A0A438HFK5 (SWIM-type domain-containing protein OS=Vitis vinifera OX=29760 GN=CK203_044939 PE=4 SV=1)

HSP 1 Score: 370.9 bits (951), Expect = 5.5e-99
Identity = 178/336 (52.98%), Postives = 232/336 (69.05%), Query Frame = 0

Query: 3   KRKNLCLISDRHKGIIAAVRNASNGWA--DAEHRFCLRHVASNFNERYKDKSLKKLVYRA 62
           +R+ +CLISDRH GI AAVRN S GW+   A+HR+CLRHV SNFN+++K+K LK+L YRA
Sbjct: 512 QREGICLISDRHAGINAAVRNPSVGWSPPHAQHRYCLRHVVSNFNDKFKNKVLKELAYRA 571

Query: 63  GAQFQVDKYKDCMAELEVANKECLRFFNSLDPKQWTQSHDGGYRYGWLTTNVAECVNGIF 122
           G Q Q  KY+  M EL+  +++ + +F+ LD ++WTQ++D GYRYGW+TTN+AEC+NG+ 
Sbjct: 572 GCQHQPRKYERYMEELKRLDEKSVAWFSKLDTQKWTQAYDLGYRYGWMTTNIAECINGVL 631

Query: 123 KGARKLPIAALVEATFYRTVNYFAKRRIEIEASIQEGQRFTRYAIEKLTTWEERANRHDV 182
           KGAR LPI ALV+ TFYR V+YF  RR EI A +  G  +T YAIEK    E +A+ H V
Sbjct: 632 KGARMLPITALVQLTFYRCVSYFETRRAEIRARMAVGDVYTAYAIEKFRRAEAKASGHTV 691

Query: 183 NVFDYGRGRCDITTAIDPITL-KGGTKHRVRLIEKTCTCNKWQSFKIPCSHAIAACKERC 242
            +F       ++ TA+    + KG  K  V+L E TC+CNKWQSF IPCSH +A      
Sbjct: 692 TIFHRIHETFEVITALHGFHMDKGRNKQVVKLNEGTCSCNKWQSFGIPCSHVLAVSAHMR 751

Query: 243 IDYLSLIDSHYELPTYLLCYAPQFEPIPEHSRWPDPGFPKIYPDPSSLRAHGRPCSSRIR 302
           ID   L++ +Y L  Y  CYAP+F PIP  S WP P FP ++PDP+S+R  GRP SSRIR
Sbjct: 752 IDSWQLVEKYYRLDAYASCYAPEFNPIPHESYWPYPDFPILHPDPTSMRDKGRPRSSRIR 811

Query: 303 NEMDWTEPVVKTRCGICRQEGHNRRNCPSRGPNTSS 336
           NEMD  EP V+ RCG+C+  GHNRRNCP++    SS
Sbjct: 812 NEMDLKEPSVRIRCGLCKIAGHNRRNCPTKDGGQSS 847

BLAST of Lcy01g005380 vs. ExPASy TrEMBL
Match: A0A438FUH8 (SWIM-type domain-containing protein OS=Vitis vinifera OX=29760 GN=CK203_057381 PE=4 SV=1)

HSP 1 Score: 370.9 bits (951), Expect = 5.5e-99
Identity = 178/336 (52.98%), Postives = 232/336 (69.05%), Query Frame = 0

Query: 3   KRKNLCLISDRHKGIIAAVRNASNGWA--DAEHRFCLRHVASNFNERYKDKSLKKLVYRA 62
           +R+ +CLISDRH GI AAVRN S GW+   A+HR+CLRHV SNFN+++K+K LK+L YRA
Sbjct: 342 QREGICLISDRHAGINAAVRNPSVGWSPPHAQHRYCLRHVVSNFNDKFKNKVLKELAYRA 401

Query: 63  GAQFQVDKYKDCMAELEVANKECLRFFNSLDPKQWTQSHDGGYRYGWLTTNVAECVNGIF 122
           G Q Q  KY+  M EL+  +++ + +F+ LD ++WTQ++D GYRYGW+TTN+AEC+NG+ 
Sbjct: 402 GCQHQPRKYERYMEELKRLDEKSVAWFSKLDTQKWTQAYDLGYRYGWMTTNIAECINGVL 461

Query: 123 KGARKLPIAALVEATFYRTVNYFAKRRIEIEASIQEGQRFTRYAIEKLTTWEERANRHDV 182
           KGAR LPI ALV+ TFYR V+YF  RR EI A +  G  +T YAIEK    E +A+ H V
Sbjct: 462 KGARMLPITALVQLTFYRCVSYFETRRAEIRARMAVGDVYTTYAIEKFRRAEAKASGHTV 521

Query: 183 NVFDYGRGRCDITTAIDPITL-KGGTKHRVRLIEKTCTCNKWQSFKIPCSHAIAACKERC 242
            +F       ++ TA+    + KG  K  V+L E TC+CNKWQSF IPCSH +A      
Sbjct: 522 TIFHRIHETFEVITALHGFHMDKGRNKQVVKLNEGTCSCNKWQSFGIPCSHVLAVSAHMR 581

Query: 243 IDYLSLIDSHYELPTYLLCYAPQFEPIPEHSRWPDPGFPKIYPDPSSLRAHGRPCSSRIR 302
           ID   L++ +Y L  Y  CYAP+F PIP  S WP P FP ++PDP+S+R  GRP SSRIR
Sbjct: 582 IDSWQLVEKYYRLDAYASCYAPEFNPIPHESYWPYPDFPILHPDPTSMRDKGRPRSSRIR 641

Query: 303 NEMDWTEPVVKTRCGICRQEGHNRRNCPSRGPNTSS 336
           NEMD  EP V+ RCG+C+  GHNRRNCP++    SS
Sbjct: 642 NEMDLKEPSVRIRCGLCKIAGHNRRNCPTKDGGQSS 677

BLAST of Lcy01g005380 vs. ExPASy TrEMBL
Match: A0A438E570 (SWIM-type domain-containing protein OS=Vitis vinifera OX=29760 GN=CK203_079903 PE=4 SV=1)

HSP 1 Score: 370.9 bits (951), Expect = 5.5e-99
Identity = 178/336 (52.98%), Postives = 232/336 (69.05%), Query Frame = 0

Query: 3   KRKNLCLISDRHKGIIAAVRNASNGWA--DAEHRFCLRHVASNFNERYKDKSLKKLVYRA 62
           +R+ +CLISDRH GI AAVRN S GW+   A+HR+CLRHV SNFN+++K+K LK+L YRA
Sbjct: 309 QREGICLISDRHAGINAAVRNPSVGWSPPHAQHRYCLRHVVSNFNDKFKNKVLKELAYRA 368

Query: 63  GAQFQVDKYKDCMAELEVANKECLRFFNSLDPKQWTQSHDGGYRYGWLTTNVAECVNGIF 122
           G Q Q  KY+  M EL+  +++ + +F+ LD ++WTQ++D GYRYGW+TTN+AEC+NG+ 
Sbjct: 369 GCQHQPRKYERYMEELKRLDEKSVAWFSKLDTQKWTQAYDLGYRYGWMTTNIAECINGVL 428

Query: 123 KGARKLPIAALVEATFYRTVNYFAKRRIEIEASIQEGQRFTRYAIEKLTTWEERANRHDV 182
           KGAR LPI ALV+ TFYR V+YF  RR EI A +  G  +T YAIEK    E +A+ H V
Sbjct: 429 KGARMLPITALVQLTFYRCVSYFETRRAEIRARMAVGDVYTAYAIEKFRRAEAKASGHTV 488

Query: 183 NVFDYGRGRCDITTAIDPITL-KGGTKHRVRLIEKTCTCNKWQSFKIPCSHAIAACKERC 242
            +F       ++ TA+    + KG  K  V+L E TC+CNKWQSF IPCSH +A      
Sbjct: 489 TIFHRIHETFEVITALHGFHMDKGRNKQVVKLNEGTCSCNKWQSFGIPCSHVLAVSAHMR 548

Query: 243 IDYLSLIDSHYELPTYLLCYAPQFEPIPEHSRWPDPGFPKIYPDPSSLRAHGRPCSSRIR 302
           ID   L++ +Y L  Y  CYAP+F PIP  S WP P FP ++PDP+S+R  GRP SSRIR
Sbjct: 549 IDSWQLVEKYYRLDAYASCYAPEFNPIPHESYWPYPDFPILHPDPTSMRDKGRPRSSRIR 608

Query: 303 NEMDWTEPVVKTRCGICRQEGHNRRNCPSRGPNTSS 336
           NEMD  EP V+ RCG+C+  GHNRRNCP++    SS
Sbjct: 609 NEMDLKEPSVRIRCGLCKIAGHNRRNCPTKDGGQSS 644

BLAST of Lcy01g005380 vs. NCBI nr
Match: RVW52006.1 (hypothetical protein CK203_068088 [Vitis vinifera])

HSP 1 Score: 405.6 bits (1041), Expect = 4.2e-109
Identity = 184/336 (54.76%), Postives = 238/336 (70.83%), Query Frame = 0

Query: 3   KRKNLCLISDRHKGIIAAVRNASNGWAD--AEHRFCLRHVASNFNERYKDKSLKKLVYRA 62
           +R+ +CLISDRH GI AA+R+ S GW+   A HR+CLRHVASNFN++Y++K LK LVYRA
Sbjct: 457 QREGICLISDRHAGIQAAIRDPSVGWSPPYAHHRYCLRHVASNFNDKYRNKMLKDLVYRA 516

Query: 63  GAQFQVDKYKDCMAELEVANKECLRFFNSLDPKQWTQSHDGGYRYGWLTTNVAECVNGIF 122
           G+Q Q  KY+ CM EL+  + +CL +F  LD K+WT +HDGG+RYGW+TTN+AEC+NG+ 
Sbjct: 517 GSQHQPRKYEACMTELKRLDDKCLEWFKRLDTKKWTLAHDGGHRYGWMTTNIAECINGVL 576

Query: 123 KGARKLPIAALVEATFYRTVNYFAKRRIEIEASIQEGQRFTRYAIEKLTTWEERANRHDV 182
           KGAR LPI ALV  TFYR V+YF  RR EI+  +  G  +T YAI K+T ++ RAN H  
Sbjct: 577 KGARMLPITALVRLTFYRCVSYFETRRTEIQTQMANGDLYTSYAINKITKYQSRANGHTA 636

Query: 183 NVFDYGRGRCDITTAIDPITL-KGGTKHRVRLIEKTCTCNKWQSFKIPCSHAIAACKERC 242
           N+F       ++TTA     + KG     V+L E+TCTCNKWQSF IPCSH +A C    
Sbjct: 637 NIFHRSNEIFEVTTAPHGFHMDKGNNIQIVKLKERTCTCNKWQSFGIPCSHVLAVCARAR 696

Query: 243 IDYLSLIDSHYELPTYLLCYAPQFEPIPEHSRWPDPGFPKIYPDPSSLRAHGRPCSSRIR 302
           ID    +D HY +  Y  CY PQF PIP  + WP+P FP ++P+P+ +R  GRP SSRIR
Sbjct: 697 IDSWQFVDKHYRMDVYACCYTPQFNPIPHQAYWPEPNFPIVHPNPNLVRDKGRPRSSRIR 756

Query: 303 NEMDWTEPVVKTRCGICRQEGHNRRNCPSRGPNTSS 336
           NEMDW EP VK RCG+C+QEGHNRR CP+RG ++++
Sbjct: 757 NEMDWREPSVKLRCGLCKQEGHNRRKCPNRGESSNT 792

BLAST of Lcy01g005380 vs. NCBI nr
Match: RVX19406.1 (hypothetical protein CK203_008540 [Vitis vinifera])

HSP 1 Score: 404.1 bits (1037), Expect = 1.2e-108
Identity = 183/336 (54.46%), Postives = 237/336 (70.54%), Query Frame = 0

Query: 3   KRKNLCLISDRHKGIIAAVRNASNGWAD--AEHRFCLRHVASNFNERYKDKSLKKLVYRA 62
           +R+ +CLISDRH GI AA+R+ S GW+   A HR+CLRHVASNFN++Y++K LK LVYRA
Sbjct: 430 QREGICLISDRHAGIQAAIRDPSVGWSPPYAHHRYCLRHVASNFNDKYRNKMLKDLVYRA 489

Query: 63  GAQFQVDKYKDCMAELEVANKECLRFFNSLDPKQWTQSHDGGYRYGWLTTNVAECVNGIF 122
           G+Q Q  KY+ CM EL+  + +CL +F  LD K+WT +HDGG+RYGW+TTN+ EC+NG+ 
Sbjct: 490 GSQHQPRKYEACMTELKRLDDKCLEWFKRLDTKKWTLAHDGGHRYGWMTTNIVECINGVL 549

Query: 123 KGARKLPIAALVEATFYRTVNYFAKRRIEIEASIQEGQRFTRYAIEKLTTWEERANRHDV 182
           KGAR LPI ALV  TFYR V+YF  RR EI+  +  G  +T YAI K+T ++ RAN H  
Sbjct: 550 KGARMLPITALVRLTFYRCVSYFETRRTEIQTQMANGDLYTSYAINKITKYQSRANGHTA 609

Query: 183 NVFDYGRGRCDITTAIDPITL-KGGTKHRVRLIEKTCTCNKWQSFKIPCSHAIAACKERC 242
           N+F       ++TTA     + KG     V+L E+TCTCNKWQSF IPCSH +A C    
Sbjct: 610 NIFHRSNEIFEVTTAPHGFHMDKGNNIQIVKLKERTCTCNKWQSFGIPCSHVLAVCARAR 669

Query: 243 IDYLSLIDSHYELPTYLLCYAPQFEPIPEHSRWPDPGFPKIYPDPSSLRAHGRPCSSRIR 302
           ID    +D HY +  Y  CY PQF PIP  + WP+P FP ++P+P+ +R  GRP SSRIR
Sbjct: 670 IDSWQFVDKHYRMEVYACCYTPQFNPIPHQAYWPEPNFPIVHPNPNLVRDKGRPRSSRIR 729

Query: 303 NEMDWTEPVVKTRCGICRQEGHNRRNCPSRGPNTSS 336
           NEMDW EP VK RCG+C+QEGHNRR CP+RG ++++
Sbjct: 730 NEMDWREPSVKLRCGLCKQEGHNRRKCPNRGESSNT 765

BLAST of Lcy01g005380 vs. NCBI nr
Match: RVW83159.1 (hypothetical protein CK203_044939 [Vitis vinifera])

HSP 1 Score: 370.9 bits (951), Expect = 1.1e-98
Identity = 178/336 (52.98%), Postives = 232/336 (69.05%), Query Frame = 0

Query: 3   KRKNLCLISDRHKGIIAAVRNASNGWA--DAEHRFCLRHVASNFNERYKDKSLKKLVYRA 62
           +R+ +CLISDRH GI AAVRN S GW+   A+HR+CLRHV SNFN+++K+K LK+L YRA
Sbjct: 512 QREGICLISDRHAGINAAVRNPSVGWSPPHAQHRYCLRHVVSNFNDKFKNKVLKELAYRA 571

Query: 63  GAQFQVDKYKDCMAELEVANKECLRFFNSLDPKQWTQSHDGGYRYGWLTTNVAECVNGIF 122
           G Q Q  KY+  M EL+  +++ + +F+ LD ++WTQ++D GYRYGW+TTN+AEC+NG+ 
Sbjct: 572 GCQHQPRKYERYMEELKRLDEKSVAWFSKLDTQKWTQAYDLGYRYGWMTTNIAECINGVL 631

Query: 123 KGARKLPIAALVEATFYRTVNYFAKRRIEIEASIQEGQRFTRYAIEKLTTWEERANRHDV 182
           KGAR LPI ALV+ TFYR V+YF  RR EI A +  G  +T YAIEK    E +A+ H V
Sbjct: 632 KGARMLPITALVQLTFYRCVSYFETRRAEIRARMAVGDVYTAYAIEKFRRAEAKASGHTV 691

Query: 183 NVFDYGRGRCDITTAIDPITL-KGGTKHRVRLIEKTCTCNKWQSFKIPCSHAIAACKERC 242
            +F       ++ TA+    + KG  K  V+L E TC+CNKWQSF IPCSH +A      
Sbjct: 692 TIFHRIHETFEVITALHGFHMDKGRNKQVVKLNEGTCSCNKWQSFGIPCSHVLAVSAHMR 751

Query: 243 IDYLSLIDSHYELPTYLLCYAPQFEPIPEHSRWPDPGFPKIYPDPSSLRAHGRPCSSRIR 302
           ID   L++ +Y L  Y  CYAP+F PIP  S WP P FP ++PDP+S+R  GRP SSRIR
Sbjct: 752 IDSWQLVEKYYRLDAYASCYAPEFNPIPHESYWPYPDFPILHPDPTSMRDKGRPRSSRIR 811

Query: 303 NEMDWTEPVVKTRCGICRQEGHNRRNCPSRGPNTSS 336
           NEMD  EP V+ RCG+C+  GHNRRNCP++    SS
Sbjct: 812 NEMDLKEPSVRIRCGLCKIAGHNRRNCPTKDGGQSS 847

BLAST of Lcy01g005380 vs. NCBI nr
Match: RVW42770.1 (hypothetical protein CK203_079903 [Vitis vinifera])

HSP 1 Score: 370.9 bits (951), Expect = 1.1e-98
Identity = 178/336 (52.98%), Postives = 232/336 (69.05%), Query Frame = 0

Query: 3   KRKNLCLISDRHKGIIAAVRNASNGWA--DAEHRFCLRHVASNFNERYKDKSLKKLVYRA 62
           +R+ +CLISDRH GI AAVRN S GW+   A+HR+CLRHV SNFN+++K+K LK+L YRA
Sbjct: 309 QREGICLISDRHAGINAAVRNPSVGWSPPHAQHRYCLRHVVSNFNDKFKNKVLKELAYRA 368

Query: 63  GAQFQVDKYKDCMAELEVANKECLRFFNSLDPKQWTQSHDGGYRYGWLTTNVAECVNGIF 122
           G Q Q  KY+  M EL+  +++ + +F+ LD ++WTQ++D GYRYGW+TTN+AEC+NG+ 
Sbjct: 369 GCQHQPRKYERYMEELKRLDEKSVAWFSKLDTQKWTQAYDLGYRYGWMTTNIAECINGVL 428

Query: 123 KGARKLPIAALVEATFYRTVNYFAKRRIEIEASIQEGQRFTRYAIEKLTTWEERANRHDV 182
           KGAR LPI ALV+ TFYR V+YF  RR EI A +  G  +T YAIEK    E +A+ H V
Sbjct: 429 KGARMLPITALVQLTFYRCVSYFETRRAEIRARMAVGDVYTAYAIEKFRRAEAKASGHTV 488

Query: 183 NVFDYGRGRCDITTAIDPITL-KGGTKHRVRLIEKTCTCNKWQSFKIPCSHAIAACKERC 242
            +F       ++ TA+    + KG  K  V+L E TC+CNKWQSF IPCSH +A      
Sbjct: 489 TIFHRIHETFEVITALHGFHMDKGRNKQVVKLNEGTCSCNKWQSFGIPCSHVLAVSAHMR 548

Query: 243 IDYLSLIDSHYELPTYLLCYAPQFEPIPEHSRWPDPGFPKIYPDPSSLRAHGRPCSSRIR 302
           ID   L++ +Y L  Y  CYAP+F PIP  S WP P FP ++PDP+S+R  GRP SSRIR
Sbjct: 549 IDSWQLVEKYYRLDAYASCYAPEFNPIPHESYWPYPDFPILHPDPTSMRDKGRPRSSRIR 608

Query: 303 NEMDWTEPVVKTRCGICRQEGHNRRNCPSRGPNTSS 336
           NEMD  EP V+ RCG+C+  GHNRRNCP++    SS
Sbjct: 609 NEMDLKEPSVRIRCGLCKIAGHNRRNCPTKDGGQSS 644

BLAST of Lcy01g005380 vs. NCBI nr
Match: RVW63588.1 (hypothetical protein CK203_057381 [Vitis vinifera])

HSP 1 Score: 370.9 bits (951), Expect = 1.1e-98
Identity = 178/336 (52.98%), Postives = 232/336 (69.05%), Query Frame = 0

Query: 3   KRKNLCLISDRHKGIIAAVRNASNGWA--DAEHRFCLRHVASNFNERYKDKSLKKLVYRA 62
           +R+ +CLISDRH GI AAVRN S GW+   A+HR+CLRHV SNFN+++K+K LK+L YRA
Sbjct: 342 QREGICLISDRHAGINAAVRNPSVGWSPPHAQHRYCLRHVVSNFNDKFKNKVLKELAYRA 401

Query: 63  GAQFQVDKYKDCMAELEVANKECLRFFNSLDPKQWTQSHDGGYRYGWLTTNVAECVNGIF 122
           G Q Q  KY+  M EL+  +++ + +F+ LD ++WTQ++D GYRYGW+TTN+AEC+NG+ 
Sbjct: 402 GCQHQPRKYERYMEELKRLDEKSVAWFSKLDTQKWTQAYDLGYRYGWMTTNIAECINGVL 461

Query: 123 KGARKLPIAALVEATFYRTVNYFAKRRIEIEASIQEGQRFTRYAIEKLTTWEERANRHDV 182
           KGAR LPI ALV+ TFYR V+YF  RR EI A +  G  +T YAIEK    E +A+ H V
Sbjct: 462 KGARMLPITALVQLTFYRCVSYFETRRAEIRARMAVGDVYTTYAIEKFRRAEAKASGHTV 521

Query: 183 NVFDYGRGRCDITTAIDPITL-KGGTKHRVRLIEKTCTCNKWQSFKIPCSHAIAACKERC 242
            +F       ++ TA+    + KG  K  V+L E TC+CNKWQSF IPCSH +A      
Sbjct: 522 TIFHRIHETFEVITALHGFHMDKGRNKQVVKLNEGTCSCNKWQSFGIPCSHVLAVSAHMR 581

Query: 243 IDYLSLIDSHYELPTYLLCYAPQFEPIPEHSRWPDPGFPKIYPDPSSLRAHGRPCSSRIR 302
           ID   L++ +Y L  Y  CYAP+F PIP  S WP P FP ++PDP+S+R  GRP SSRIR
Sbjct: 582 IDSWQLVEKYYRLDAYASCYAPEFNPIPHESYWPYPDFPILHPDPTSMRDKGRPRSSRIR 641

Query: 303 NEMDWTEPVVKTRCGICRQEGHNRRNCPSRGPNTSS 336
           NEMD  EP V+ RCG+C+  GHNRRNCP++    SS
Sbjct: 642 NEMDLKEPSVRIRCGLCKIAGHNRRNCPTKDGGQSS 677

BLAST of Lcy01g005380 vs. TAIR 10
Match: AT1G49920.1 (MuDR family transposase )

HSP 1 Score: 136.7 bits (343), Expect = 3.4e-32
Identity = 87/290 (30.00%), Postives = 141/290 (48.62%), Query Frame = 0

Query: 3   KRKNLCLISDRHKGIIAAVRNASNGWAD--AEHRFCLRHVASNFNERYK--DKSLKKLVY 62
           +R+ +CLIS     I+A +    + W +  A HRFCL H+ S         D ++  LV 
Sbjct: 438 QRQGICLISSPDPDILAVINEPGSQWKEPWAYHRFCLYHLCSKLCSVSPGFDYNMHFLVD 497

Query: 63  RAGAQFQVDKYKDCMAELEVANKECLRFFNSLDPKQWTQSHDGGYRYGWLTTNVAECVNG 122
            AG+  Q +++   M E++  N E  ++ +   P QW  +HD G RYG +  +  E +  
Sbjct: 498 EAGSSSQKEEFDSYMKEIKERNPEAWKWLDQFPPHQWALAHDDGRRYGIMRID-TEALFA 557

Query: 123 IFKGARKLPIAALVEATFYRTVNYFAKRRIEIEASIQEGQRFTRYAIEKLTTWEERANRH 182
           + K  RK+ +A  V   F +  + FA+       S++ G  +T + +EKL  +E  ++  
Sbjct: 558 VCKRFRKVAMAGGVMLLFGQLKDAFAESFKLSRGSLKHGDVYTEHVMEKLEEFETDSDTW 617

Query: 183 DVNVFDYGRGRCDITTAIDPITLKGG-----TKHRVRLIEKTCTCNKWQSFKIPCSHAIA 242
            + +    R    ++ A    T   G     T   V+L + TCTC ++Q  K PC HA+A
Sbjct: 618 VITITPLERDAYQVSMAPKKKTRLMGQSNDSTSGIVQLNDTTCTCGEFQKNKFPCLHALA 677

Query: 243 ACKERCIDYLSLIDSHYELPTYLLCYAPQFEPIPEHSRWPDP-GFPKIYP 283
            C E  I+ L  +D  Y +  Y   Y+ +F P+PE S WP+  G P + P
Sbjct: 678 VCDELKINPLQYVDDCYTVERYHKTYSAKFSPVPELSAWPEAYGVPTLIP 726

BLAST of Lcy01g005380 vs. TAIR 10
Match: AT1G64260.1 (MuDR family transposase )

HSP 1 Score: 124.4 bits (311), Expect = 1.7e-28
Identity = 81/290 (27.93%), Postives = 143/290 (49.31%), Query Frame = 0

Query: 3   KRKNLCLISDRHKGIIAAVRNASNGWAD--AEHRFCLRHVASNFNERYKDKSLKKLVYRA 62
           +RK+LCLIS   + I+A V    + W +  A H+FCL H+ S F   ++D +L+ LV +A
Sbjct: 435 QRKDLCLISSPLRDIVAVVNEPGSLWQEPWAHHKFCLNHLRSQFLGVFRDYNLESLVEQA 494

Query: 63  GAQFQVDKYKDCMAELEVANKECLRFFNSLDPKQWTQSHDGGYRYGWLTTNVAECVNGIF 122
           G+  Q +++   M +++  N E  ++ + +   +W  +HD G RYG +  +  E +  + 
Sbjct: 495 GSTNQKEEFDSYMNDIKEKNPEAWKWLDQIPRHKWALAHDSGLRYGIIEID-REALFAVC 554

Query: 123 KGARKLPIAAL--VEATFYRTVNYFAKRRIEIEASIQEGQRFTRYAIEKLTTWEERANRH 182
           +G     +A    V   F    + F K    I +S+  G  +T   ++KL  +   +  +
Sbjct: 555 RGFPYCTVAMTGGVMLMFDELRSSFDKSLSSIYSSLNRGVVYTEPFMDKLEEFMTDSIPY 614

Query: 183 DVNVFDYGRGRCDITTAIDPITLKGGTKHRVRLIEKTCTCNKWQSFKIPCSHAIAACKER 242
            +   +  R    ++ + +        +  V+L   TCTC K+QS+K PC HA+A  ++ 
Sbjct: 615 VITQLE--RDSFKVSESSEK------EEWIVQLNVSTCTCRKFQSYKFPCLHALAVFEKL 674

Query: 243 CIDYLSLIDSHYELPTYLLCYAPQFEPIPEHSRWP-DPGFPKIYPDPSSL 288
            I+ L  +D  Y +  Y   YA  F P+P+ + WP D   P ++P    L
Sbjct: 675 KINPLQYVDECYTVEQYCKTYAATFSPVPDVAAWPEDCRVPTLFPPSQQL 715

BLAST of Lcy01g005380 vs. TAIR 10
Match: AT1G64255.1 (MuDR family transposase )

HSP 1 Score: 123.2 bits (308), Expect = 3.8e-28
Identity = 85/285 (29.82%), Postives = 131/285 (45.96%), Query Frame = 0

Query: 3   KRKNLCLISDRHKGIIAAVRNASNGWAD--AEHRFCLRHVASNFNERYKDKSLKKLVYRA 62
           +RK LCLIS  H  IIA V  + + W +  A HRF L H  S F+  +    L   + RA
Sbjct: 442 QRKGLCLISSPHPDIIAVVNESGSQWQEPWAYHRFSLNHFYSQFSRVFPSFCLGARIRRA 501

Query: 63  GAQFQVDKYKDCMAELEVANKECLRFFNSLDPKQWTQSHDGGYRYGWLTTNVAE--CVNG 122
           G+  Q D++   M +++  N E  ++ +     +W  +HD G RYG +  N      V  
Sbjct: 502 GSTSQKDEFVSYMNDIKEKNPEARKWLDQFPQNRWALAHDNGRRYGIMEINTKALFAVCN 561

Query: 123 IFKGARKLPIAALVEATFYRTVNYFAKRRIEIEASIQEGQRFTRYAIEKLTTWEERANRH 182
            F+ A  + +   V   F    + F K      +S+  G  +T   ++KL  +      +
Sbjct: 562 AFEQAGHV-VTGSVLLLFDELRSKFDKSFSCSRSSLNCGDVYTEPVMDKLEEFRTTFVTY 621

Query: 183 DVNVFDYGRGRCDITTAIDPITLKGGTKHRVRLIEKTCTCNKWQSFKIPCSHAIAACKER 242
              V         + TA+D    KG  +  V+L + +CTC  +Q +K PC HA+A CK+ 
Sbjct: 622 SYIVTPLDNNAFQVATALD----KG--ECIVQLSDCSCTCGDFQRYKFPCLHALAVCKKL 681

Query: 243 CIDYLSLIDSHYELPTYLLCYAPQFEPIPEHSRWPD-PGFPKIYP 283
             + L  +D  Y L      YA  F  +PE S WP+  G P++ P
Sbjct: 682 KFNPLQYVDDCYTLERLKRTYATIFSHVPEMSAWPEASGVPRLLP 719

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A438EWG22.0e-10954.76SWIM-type domain-containing protein OS=Vitis vinifera OX=29760 GN=CK203_068088 P... [more]
A0A438KDW55.9e-10954.46SWIM-type domain-containing protein OS=Vitis vinifera OX=29760 GN=CK203_008540 P... [more]
A0A438HFK55.5e-9952.98SWIM-type domain-containing protein OS=Vitis vinifera OX=29760 GN=CK203_044939 P... [more]
A0A438FUH85.5e-9952.98SWIM-type domain-containing protein OS=Vitis vinifera OX=29760 GN=CK203_057381 P... [more]
A0A438E5705.5e-9952.98SWIM-type domain-containing protein OS=Vitis vinifera OX=29760 GN=CK203_079903 P... [more]
Match NameE-valueIdentityDescription
RVW52006.14.2e-10954.76hypothetical protein CK203_068088 [Vitis vinifera][more]
RVX19406.11.2e-10854.46hypothetical protein CK203_008540 [Vitis vinifera][more]
RVW83159.11.1e-9852.98hypothetical protein CK203_044939 [Vitis vinifera][more]
RVW42770.11.1e-9852.98hypothetical protein CK203_079903 [Vitis vinifera][more]
RVW63588.11.1e-9852.98hypothetical protein CK203_057381 [Vitis vinifera][more]
Match NameE-valueIdentityDescription
AT1G49920.13.4e-3230.00MuDR family transposase [more]
AT1G64260.11.7e-2827.93MuDR family transposase [more]
AT1G64255.13.8e-2829.82MuDR family transposase [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006564Zinc finger, PMZ-typeSMARTSM0057526again6coord: 214..241
e-value: 9.4E-7
score: 38.4
IPR007527Zinc finger, SWIM-typePFAMPF04434SWIMcoord: 203..236
e-value: 1.6E-8
score: 34.0
IPR007527Zinc finger, SWIM-typePROSITEPS50966ZF_SWIMcoord: 207..239
score: 9.420937

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy01g005380.1Lcy01g005380.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0008270 zinc ion binding