Lcy01g001400 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy01g001400
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Mitochondrial transcription termination factor family protein
Location	Chr01: 1670646 .. 1672688 (-)
RNA-Seq Expression	Lcy01g001400
Synteny	Lcy01g001400

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTAATTAGTGGCTTTGAACGTTGTACCCAATTTGAAATTTGGGGAAAATCCTTCTCTCAAACTCGAAGTGAGGGCAGGCGAGTTCATTTCACCGCTGTCCAAAATTCGGCCTCAATGTCTAATTTCCTCTGCAAAACCCTAATTCAGGTTCGGCATCTCATCTCGATTTCGCCATCTCCAAACCTTCGTTGCGTTCAATTACTCCATTTCAACTACAGCACAAGCGTTTCAGATTCGCATTCTTTCACAGTTTCGTATCTCATCAACTCATGCTCGTTCTCGCCTGAATCTGCTTCGTCTGCTTCAAAGCTCGTTAGCTTCGATTCTCCCGAAAAACCAGACTCGGTGATCTCCTTCTTCAAGAATCGCGGTTTTTCTAATACCCATATCTCGTTCATTATCGGGAAATACCCTCGGCTTCTGTTATCTGATCCGAACAAAACTCTTTTGCCCAAGTTCGACTTTCTATACTCCAAAGGTGCTTCGAGTTCCGAAGTCTCGAAGATTATTGTCAAGGCTCCGAAAATCTTGAGGAGAAGCGTTAATGAACATTTGGTTCCTGCTTTTGAGTTTTTGAAGGGTTATCTTCAATCTAATGAGCGGACTATTGCGTCTATCAAACGCTTTCCGAGTATTATTGCTGATTTTCGTCAGAAACAATTGAATGGTTCCATTAGAATGTTGCTCGATGCTGGCGTGCCTGAGGCGAATGTCATGTATTTTCTTCTTTATCAGCCGAGAATGTTCACCATGGATCTAGACAGGTTTAGGGAGATTTTGGAAGATGTGTTGAAAATGGGGTTCGATCCATCAAAGTCGAGCTTTGTTCAAGCTGTTCATGCTATACGAGCAATGAGCAAATCGACATGGGAACGGAAGCTTGGTATTTATAAGAGGTGGGGTTTATCTGAAGAAGAAATTCTTGCTGCATTTAGGAGCCACCCATGGTGTATGACATTATCAGAGGAAAAAATCATGCTGGGGATGGATTTCTTTGTCAACAAATTAGGTTGGGAAGCTGCAAAGGTTGTCAAGAGTCCTGTGCTGATTTCATTTAGTTTAAAAAAGAGAATAATTCCAAGAGCTTCAGTTCTGCTGTTCCTGTTCCAGAAAGGTTTGACTAAGAAAAAATTCATGTCGGTAAAACCATATATGTACACTGAAAATCAGTTCTTGCAGAAGTTTGTTCGTCCTCATCTGGAAGAGGTTCCTCAGCTGTCAAAGTTGTATCATGTAAATGTGGATGATGGGATTAATCAATTATGAATTTTGAGGCATTCGCTTTATACTGTGAGTTCCAATTGAGCTTTTTCAGTAAGATTGTTCATTGCATTGATTTGCTAAGTTAAACTACATACAATGCTTGAATATCTTGAGTGAAGCTTACTATGTTTCATTATAATTCTTGCAGCGAAAGACTGATTCAACATTACTCATAAACATTAGATTAACCTAAAAGCATTGCCATGATTTTCCGGTGTCTGTTCTTGTGACTTGTTGGTTTGCTAAAGATTGGCAGAAATATCACTTATTGGTCAATTAAGAATACCCAAACCTCATAGTAAATTTAGGGGATATTTTGGAAGAGAAGACAGCTTGTACTTTGTTTTTAAGTGCTACTTTAGATGGCTTGCAAAGGTAAGGCTATAATGCATTTGCCAAAGCAGATTAAATCAGTTGCTCATAAATTTTTTAGAATTTGAAGGAGAATTTGAAGGGGTGCCTGACACAAAGTGCAAGAAACCTTCAAGGGAATTGCAGAACTAGAAAAGGTTAGATGTTTTGGTACTGTAACTGCTGGTTGCAGTCTGAGTCTGCTGTTGAATTTTGATGGATAAATTGGCAATGATGCAACTTTTAAAGGTTACATCCCATCAAAATTGTCTATCCATTTTCTTTGTGGCAGGGCTTTCAGACCTTAATGGGAAGGATCCCTGTTTGAAGATGATTTGAATTGAAGCAGGAATATGAATATATCTGGTTCTGTCAGTTAGGAATTCATTCACTTTTCACCACAACTATCTTTTGATGATAAGACCCA

mRNA sequence

ATTTAATTAGTGGCTTTGAACGTTGTACCCAATTTGAAATTTGGGGAAAATCCTTCTCTCAAACTCGAAGTGAGGGCAGGCGAGTTCATTTCACCGCTGTCCAAAATTCGGCCTCAATGTCTAATTTCCTCTGCAAAACCCTAATTCAGGTTCGGCATCTCATCTCGATTTCGCCATCTCCAAACCTTCGTTGCGTTCAATTACTCCATTTCAACTACAGCACAAGCGTTTCAGATTCGCATTCTTTCACAGTTTCGTATCTCATCAACTCATGCTCGTTCTCGCCTGAATCTGCTTCGTCTGCTTCAAAGCTCGTTAGCTTCGATTCTCCCGAAAAACCAGACTCGGTGATCTCCTTCTTCAAGAATCGCGGTTTTTCTAATACCCATATCTCGTTCATTATCGGGAAATACCCTCGGCTTCTGTTATCTGATCCGAACAAAACTCTTTTGCCCAAGTTCGACTTTCTATACTCCAAAGGTGCTTCGAGTTCCGAAGTCTCGAAGATTATTGTCAAGGCTCCGAAAATCTTGAGGAGAAGCGTTAATGAACATTTGGTTCCTGCTTTTGAGTTTTTGAAGGGTTATCTTCAATCTAATGAGCGGACTATTGCGTCTATCAAACGCTTTCCGAGTATTATTGCTGATTTTCGTCAGAAACAATTGAATGGTTCCATTAGAATGTTGCTCGATGCTGGCGTGCCTGAGGCGAATGTCATGTATTTTCTTCTTTATCAGCCGAGAATGTTCACCATGGATCTAGACAGGTTTAGGGAGATTTTGGAAGATGTGTTGAAAATGGGGTTCGATCCATCAAAGTCGAGCTTTGTTCAAGCTGTTCATGCTATACGAGCAATGAGCAAATCGACATGGGAACGGAAGCTTGGTATTTATAAGAGGTGGGGTTTATCTGAAGAAGAAATTCTTGCTGCATTTAGGAGCCACCCATGGTGTATGACATTATCAGAGGAAAAAATCATGCTGGGGATGGATTTCTTTGTCAACAAATTAGGTTGGGAAGCTGCAAAGGTTGTCAAGAGTCCTGTGCTGATTTCATTTAGTTTAAAAAAGAGAATAATTCCAAGAGCTTCAGTTCTGCTGTTCCTGTTCCAGAAAGGTTTGACTAAGAAAAAATTCATGTCGGTAAAACCATATATGTACACTGAAAATCAGTTCTTGCAGAAGTTTGTTCGTCCTCATCTGGAAGAGGTTCCTCAGCTGTCAAAGTTGTATCATGTAAATGTGGATGATGGGATTAATCAATTATGAATTTTGAGGCATTCGCTTTATACTCGAAAGACTGATTCAACATTACTCATAAACATTAGATTAACCTAAAAGCATTGCCATGATTTTCCGGTGTCTGTTCTTGTGACTTGTTGGTTTGCTAAAGATTGGCAGAAATATCACTTATTGGTCAATTAAGAATACCCAAACCTCATAGTAAATTTAGGGGATATTTTGGAAGAGAAGACAGCTTGTACTTTGTTTTTAAGTGCTACTTTAGATGGCTTGCAAAGGTAAGGCTATAATGCATTTGCCAAAGCAGATTAAATCAGTTGCTCATAAATTTTTTAGAATTTGAAGGAGAATTTGAAGGGGTGCCTGACACAAAGTGCAAGAAACCTTCAAGGGAATTGCAGAACTAGAAAAGGTTAGATGTTTTGGTACTGTAACTGCTGGTTGCAGTCTGAGTCTGCTGTTGAATTTTGATGGATAAATTGGCAATGATGCAACTTTTAAAGGTTACATCCCATCAAAATTGTCTATCCATTTTCTTTGTGGCAGGGCTTTCAGACCTTAATGGGAAGGATCCCTGTTTGAAGATGATTTGAATTGAAGCAGGAATATGAATATATCTGGTTCTGTCAGTTAGGAATTCATTCACTTTTCACCACAACTATCTTTTGATGATAAGACCCA

Coding sequence (CDS)

ATGTCTAATTTCCTCTGCAAAACCCTAATTCAGGTTCGGCATCTCATCTCGATTTCGCCATCTCCAAACCTTCGTTGCGTTCAATTACTCCATTTCAACTACAGCACAAGCGTTTCAGATTCGCATTCTTTCACAGTTTCGTATCTCATCAACTCATGCTCGTTCTCGCCTGAATCTGCTTCGTCTGCTTCAAAGCTCGTTAGCTTCGATTCTCCCGAAAAACCAGACTCGGTGATCTCCTTCTTCAAGAATCGCGGTTTTTCTAATACCCATATCTCGTTCATTATCGGGAAATACCCTCGGCTTCTGTTATCTGATCCGAACAAAACTCTTTTGCCCAAGTTCGACTTTCTATACTCCAAAGGTGCTTCGAGTTCCGAAGTCTCGAAGATTATTGTCAAGGCTCCGAAAATCTTGAGGAGAAGCGTTAATGAACATTTGGTTCCTGCTTTTGAGTTTTTGAAGGGTTATCTTCAATCTAATGAGCGGACTATTGCGTCTATCAAACGCTTTCCGAGTATTATTGCTGATTTTCGTCAGAAACAATTGAATGGTTCCATTAGAATGTTGCTCGATGCTGGCGTGCCTGAGGCGAATGTCATGTATTTTCTTCTTTATCAGCCGAGAATGTTCACCATGGATCTAGACAGGTTTAGGGAGATTTTGGAAGATGTGTTGAAAATGGGGTTCGATCCATCAAAGTCGAGCTTTGTTCAAGCTGTTCATGCTATACGAGCAATGAGCAAATCGACATGGGAACGGAAGCTTGGTATTTATAAGAGGTGGGGTTTATCTGAAGAAGAAATTCTTGCTGCATTTAGGAGCCACCCATGGTGTATGACATTATCAGAGGAAAAAATCATGCTGGGGATGGATTTCTTTGTCAACAAATTAGGTTGGGAAGCTGCAAAGGTTGTCAAGAGTCCTGTGCTGATTTCATTTAGTTTAAAAAAGAGAATAATTCCAAGAGCTTCAGTTCTGCTGTTCCTGTTCCAGAAAGGTTTGACTAAGAAAAAATTCATGTCGGTAAAACCATATATGTACACTGAAAATCAGTTCTTGCAGAAGTTTGTTCGTCCTCATCTGGAAGAGGTTCCTCAGCTGTCAAAGTTGTATCATGTAAATGTGGATGATGGGATTAATCAATTATGA

Protein sequence

MSNFLCKTLIQVRHLISISPSPNLRCVQLLHFNYSTSVSDSHSFTVSYLINSCSFSPESASSASKLVSFDSPEKPDSVISFFKNRGFSNTHISFIIGKYPRLLLSDPNKTLLPKFDFLYSKGASSSEVSKIIVKAPKILRRSVNEHLVPAFEFLKGYLQSNERTIASIKRFPSIIADFRQKQLNGSIRMLLDAGVPEANVMYFLLYQPRMFTMDLDRFREILEDVLKMGFDPSKSSFVQAVHAIRAMSKSTWERKLGIYKRWGLSEEEILAAFRSHPWCMTLSEEKIMLGMDFFVNKLGWEAAKVVKSPVLISFSLKKRIIPRASVLLFLFQKGLTKKKFMSVKPYMYTENQFLQKFVRPHLEEVPQLSKLYHVNVDDGINQL

Homology

[Close]

BLAST of Lcy01g001400 vs. ExPASy Swiss-Prot
Match: Q9FK23 (Transcription termination factor MTERF8, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF8 PE=1 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 1.2e-17
Identity = 69/289 (23.88%), Postives = 134/289 (46.37%), Query Frame = 0


Query: 64  SKLVSFDSPEKPDSVISFFKNRGFSNTHISFIIGKYPRLLLSDPNKTLLPKFDFLYS-KG 123
           +KL+   S E  + +ISF +  G        II + P +L SD +  L+P+ DF+ +  G
Sbjct: 208 NKLLYQKSVEDIERLISFLEPFGGIG-----IIARRPVILNSDLDSQLIPRVDFIRNLSG 267

Query: 124 ASSSEVSKIIVKAPKILRRSVNEHLVPAFEFLKGYL-QSNERTIASIKRFPSIIADFRQK 183
                   ++ + P IL  SV EH+    EFLK +   ++E+    +  FP++I+  +++
Sbjct: 268 EDDFATGTVLRRLPAILSYSV-EHMNGQVEFLKSFAGLTSEQVFKIVHVFPNVISTSKER 327

Query: 184 QLNGSIRMLLDAGVPEANVMYFLLYQPRMFTMDLDRFREILEDVLKMGFDPSKSSFVQAV 243
           +L   I  L + G     +  FL   P +  +  +     L  ++K+G+         A+
Sbjct: 328 KLRPRIEFLKECGFDSPGMFKFLSKAPLILALSENNLSHKLGFLVKIGYKHRTKELAFAM 387

Query: 244 HAIRAMSKSTWERKLGIYKRWGLSEEEILAAFRSHPWCMTLSEEKIMLGMDFFVNKLGWE 303
            A+   S    +R +G+Y  +GLS E+ILA    HP  +  +   +   +++ +  +G E
Sbjct: 388 GAVTRTSSDNMQRVIGLYLSYGLSFEDILAMSTKHPQVLQYNYTSLEEKLEYLIEYMGRE 447

Query: 304 AAKVVKSPVLISFSLKKRIIPRASVLLFLFQKGLTKKKFMSVKPYMYTE 351
             +++  P  + + L  RI  R    L    + ++  K ++V    +++
Sbjct: 448 VEELLAFPAFLGYKLDSRIKHRYEEKLKSRGENMSLNKLLTVSAERFSK 490

[Close]

BLAST of Lcy01g001400 vs. ExPASy Swiss-Prot
Match: Q9SZL6 (Transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MTERF6 PE=2 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 3.1e-10
Identity = 64/274 (23.36%), Postives = 126/274 (45.99%), Query Frame = 0


Query: 77  SVISFFKNRGFSNTHISFIIGKYPRLLLSDPNKTLLPKFDFLYS-KGASSSEVSKIIVKA 136
           S++ FF+++GF +  I  ++ K  +L  +  +      +D+L +  G    ++  I+ + 
Sbjct: 8   SIMWFFRDKGFDDPSIDKMLRKCKQLEKAQ-SDVASENWDYLSNIVGIQERKLPYIVSRC 67

Query: 137 PKILRRSVNEHLVPAFEFLKGYLQSNERTIAS-IKRFPSIIADFRQKQLNGSIRMLLDAG 196
           PKIL   ++E L+P  E L   L  N R +AS I +FP I++   +++L   +      G
Sbjct: 68  PKILTLRLDERLIPMVECLSS-LGRNPREVASAITKFPPILSHSVEEKLCPLLAFFQALG 127

Query: 197 VPEANVMYFLLYQPRMFTMDLD-RFREILEDVLKMGFDPS--------KSSFVQAVHAIR 256
           VPE  +   +L+ PR+ +  +D +   I+  +  +G D          K+ F+      +
Sbjct: 128 VPETQLGKMILFNPRLISYSIDTKLTVIVSFLASLGLDQDGMIGKVLVKNPFLMGYSVDK 187

Query: 257 AMSKSTWERKLGIYKRWGLSEEEILAAFRSHPWCMTLSEEKIMLGMDFFVNKLGWE---- 316
            +  +T   K  +    GLSE+ I +   + P  +     KI+     ++ + G+     
Sbjct: 188 RLRPTTEFLKSSV----GLSEDGIKSVVMNFPQLLCRDVNKILKPNYDYLKECGFGDSQI 247

Query: 317 AAKVVKSPVLISFSLKKRIIPRASVLLFLFQKGL 336
           A  V   P ++  S+K  + PR   L+ +  +G+
Sbjct: 248 ATMVTGYPQILIKSVKNSLQPRIRFLVQVMGRGM 275

[Close]

BLAST of Lcy01g001400 vs. ExPASy Swiss-Prot
Match: Q9FM80 (Transcription termination factor MTERF9, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF9 PE=2 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 3.2e-07
Identity = 51/223 (22.87%), Postives = 97/223 (43.50%), Query Frame = 0


Query: 114 KFDFLYSKGASSSEVSKIIVKAPKILRRSVNEHLVPAFEFLKGYLQSNERTIASIKRFPS 173
           + D+L S G    ++ +++++ P+IL+ +V  +L     FL G    N +    +   PS
Sbjct: 222 RLDYLLSVGVKHRDIKRMLLRQPQILQYTVENNLKAHISFLMGLGIPNSKIGQIVAATPS 281

Query: 174 IIADFRQKQLNGSIRMLL-DAGVPEANVMYFLLYQPRMFTMDLDRFREILEDVLKMGFDP 233
           + +   +  L  +IR L+ + G+ E +V   +   P++    LD         L      
Sbjct: 282 LFSYSVENSLRPTIRYLIEEVGIKETDVGKVVQLSPQILVQRLDITWNTRYMFLSKELGA 341

Query: 234 SKSSFVQAV----HAIRAMSKSTWERKLGIYKRWGLSEEEILAAFRSHPWCMTLS-EEKI 293
            + S V+ V      +       +  ++   +  G+   +IL    S    ++LS E+ +
Sbjct: 342 PRDSVVKMVKKHPQLLHYSIDDGFLPRINFLRSIGMCNSDILKVLTSLTQVLSLSLEDNL 401

Query: 294 MLGMDFFVNKLGWEAAKVVKSPVLISFSLKKRIIPRASVLLFL 331
                + VN+L  E   + K P+ +S SL +RI PR   L+ L
Sbjct: 402 KPKYMYLVNELNNEVHILTKYPMYLSLSLDQRIRPRHRFLVEL 444

[Close]

BLAST of Lcy01g001400 vs. ExPASy Swiss-Prot
Match: Q84X53 (Transcription termination factor MTEF1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF1 PE=2 SV=2)

HSP 1 Score: 57.4 bits (137), Expect = 4.2e-07
Identity = 42/153 (27.45%), Postives = 78/153 (50.98%), Query Frame = 0


Query: 48  YLINSCSFS----PESASSASKLVSFDSPEKPDSVISFFKNRGFSNTHISFIIGKYPRLL 107
           +L N  S S    P+S S   +L+      +    ++F K  GF       I  +   LL
Sbjct: 107 FLSNEISISEQDIPKSISRCPRLLISSVDYQLRPALTFLKTLGFVGR--DTITSRNTVLL 166

Query: 108 LSDPNKTLLPKFDFL-YSKGASSSEVSKIIVKAPKILRRSVNEHLVPAFEFLKGYLQSNE 167
           +S+  +TL+PK ++L    G +  EV+K++V++P +L  SV+ +LVP  EF   +++   
Sbjct: 167 VSNVERTLIPKIEYLEEGLGFTREEVAKMVVRSPALLTYSVDNNLVPKVEF---FIEEMR 226

Query: 168 RTIASIKRFPSIIADFRQKQLNGSIRMLLDAGV 196
             +  +KRFP   +   ++++    R+L + G+
Sbjct: 227 GDVKELKRFPQYFSFSLERKIKPRHRLLKEHGI 254

[Close]

BLAST of Lcy01g001400 vs. ExPASy TrEMBL
Match: A0A6J1CAW8 (transcription termination factor MTERF6, chloroplastic/mitochondrial-like OS=Momordica charantia OX=3673 GN=LOC111009559 PE=3 SV=1)

HSP 1 Score: 679.9 bits (1753), Expect = 6.3e-192
Identity = 344/382 (90.05%), Postives = 365/382 (95.55%), Query Frame = 0


Query: 1   MSNFLCKTLIQVRHLISISPSPNLRCVQLLHFNYST-SVSDSHSFTVSYLINSCSFSPES 60
           MSNFLCKTLI+VRHL++ SP PNLRCVQ LH +Y+T +VSDSHSFTVSYL+NSCSFSPES
Sbjct: 1   MSNFLCKTLIRVRHLLTNSPYPNLRCVQFLHVSYTTAAVSDSHSFTVSYLVNSCSFSPES 60

Query: 61  ASSASKLVSFDSPEKPDSVISFFKNRGFSNTHISFIIGKYPRLLLSDPNKTLLPKFDFLY 120
           A SASKLVSFD+ +KPDSVISFFKNRGFSN HIS IIGKYPRLLLSDPNKTLLPK +FLY
Sbjct: 61  ALSASKLVSFDARDKPDSVISFFKNRGFSNIHISLIIGKYPRLLLSDPNKTLLPKLEFLY 120

Query: 121 SKGASSSEVSKIIVKAPKILRRSVNEHLVPAFEFLKGYLQSNERTIASIKRFPSIIADFR 180
           S+GASSSEVSKIIVKAPKILRRSVN+HL+PAF+FLKGYLQSNERTIASIKRFPSIIADFR
Sbjct: 121 SRGASSSEVSKIIVKAPKILRRSVNKHLIPAFDFLKGYLQSNERTIASIKRFPSIIADFR 180

Query: 181 QKQLNGSIRMLLDAGVPEANVMYFLLYQPRMFTMDLDRFREILEDVLKMGFDPSKSSFVQ 240
           Q QLNGSIRMLLDAGVPEANVMYFLLYQPRMFTMDLDRFREILEDV+KMGFDP KSSFVQ
Sbjct: 181 QNQLNGSIRMLLDAGVPEANVMYFLLYQPRMFTMDLDRFREILEDVMKMGFDPLKSSFVQ 240

Query: 241 AVHAIRAMSKSTWERKLGIYKRWGLSEEEILAAFRSHPWCMTLSEEKIMLGMDFFVNKLG 300
           AVHAIRAMSKSTWERKL IYKRWGLSE+EI+AAFRSHPWCMTLSEEKIMLGMDFFVNKLG
Sbjct: 241 AVHAIRAMSKSTWERKLNIYKRWGLSEKEIIAAFRSHPWCMTLSEEKIMLGMDFFVNKLG 300

Query: 301 WEAAKVVKSPVLISFSLKKRIIPRASVLLFLFQKGLTKKKFMSVKPYMYTENQFLQKFVR 360
           WE+A VVKSPVL+SFSLKKR IPRASVLLFLF+KGLTKKKFM VKPYMYTE QFLQKFVR
Sbjct: 301 WESAAVVKSPVLLSFSLKKRTIPRASVLLFLFEKGLTKKKFMLVKPYMYTELQFLQKFVR 360

Query: 361 PHLEEVPQLSKLYHVNVDDGIN 382
           PHLEEVPQLSKLYHVNVDDGI+
Sbjct: 361 PHLEEVPQLSKLYHVNVDDGIH 382

[Close]

BLAST of Lcy01g001400 vs. ExPASy TrEMBL
Match: A0A6J1KHT4 (transcription termination factor MTERF6, chloroplastic/mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111494528 PE=3 SV=1)

HSP 1 Score: 637.9 bits (1644), Expect = 2.8e-179
Identity = 324/383 (84.60%), Postives = 345/383 (90.08%), Query Frame = 0


Query: 1   MSNFLCKTLIQVRHLISISPSPNLRCVQLLHFNYSTSVSDSHSFTVSYLINSCSFSPESA 60
           MSNFLCKTL+QVRHL +ISP P LRCVQ LHFNYST  SDSHSFTVSYLINSCS SPESA
Sbjct: 1   MSNFLCKTLLQVRHLTTISPYPKLRCVQSLHFNYSTVSSDSHSFTVSYLINSCSLSPESA 60

Query: 61  SSASKLVSFDSPEKPDSVISFFKNRGFSNTHISFIIGKYPRLLLSDPNKTLLPKFDFLYS 120
           SSASKLVSF SPEKPD VISFFKN GFS  HISFIIGKYPR+LLS+PN  LLP+ +FLY+
Sbjct: 61  SSASKLVSFISPEKPDLVISFFKNHGFSIAHISFIIGKYPRILLSNPNGALLPRLEFLYT 120

Query: 121 KGASSSEVSKIIVKAPKILRRSVNEHLVPAFEFLKGYLQSNERTIASIKRFPSIIADFRQ 180
           +GASSSEV+KII KAPKIL RSV+EHLVPAF+ LKGYL SNERTIASIKRFPSIIAD RQ
Sbjct: 121 RGASSSEVTKIISKAPKILMRSVDEHLVPAFDLLKGYLGSNERTIASIKRFPSIIADIRQ 180

Query: 181 KQLNGSIRMLLDAGVPEANVMYFLLYQPRMFTMDLDRFREILEDVLKMGFDPSKSSFVQA 240
           K L+GS+RMLLDAGVPEA+VMYFL YQPRMFTM LDRFREILEDV KMGFDPSKSSF+QA
Sbjct: 181 KHLSGSVRMLLDAGVPEAHVMYFLFYQPRMFTMALDRFREILEDVKKMGFDPSKSSFIQA 240

Query: 241 VHAIRAMSKSTWERKLGIYKRWGLSEEEILAAFRSHPWCMTLSEEKIMLGMDFFVNKLGW 300
           VHAIR MSKSTW RKLGIYKRWGLSEEEILAAFRSHPWCMTLSEEKIML MDFFV KLGW
Sbjct: 241 VHAIRGMSKSTWVRKLGIYKRWGLSEEEILAAFRSHPWCMTLSEEKIMLAMDFFVKKLGW 300

Query: 301 EAAKVVKSPVLISFSLKKRIIPRASVLLFLFQKGLTKKKFMSVKPYMYTENQFLQKFVRP 360
           E A +V+SPVL+SFSLKKR IPRASVLLFLFQKGLT KK M VKPYMYTE QFLQKFVRP
Sbjct: 301 ETAAIVRSPVLLSFSLKKRTIPRASVLLFLFQKGLTTKKTMLVKPYMYTETQFLQKFVRP 360

Query: 361 HLEEVPQLSKLYHVNVDDGINQL 384
           HL+E PQLSKLY +NVD GIN+L
Sbjct: 361 HLKEAPQLSKLYRINVDGGINRL 383

[Close]

BLAST of Lcy01g001400 vs. ExPASy TrEMBL
Match: A0A6J1ER69 (transcription termination factor MTERF6, chloroplastic/mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111436817 PE=3 SV=1)

HSP 1 Score: 630.2 bits (1624), Expect = 5.7e-177
Identity = 322/380 (84.74%), Postives = 342/380 (90.00%), Query Frame = 0


Query: 1   MSNFLCKTLIQVRHLISISPSPNLRCVQLLHFNYSTSVSDSHSFTVSYLINSCSFSPESA 60
           MSNFLCKTL+QVRHL +ISP P LRCVQ LHFNYST  SDSHSFTVSYLINSCS SPESA
Sbjct: 1   MSNFLCKTLLQVRHLTTISPYPKLRCVQSLHFNYSTVASDSHSFTVSYLINSCSLSPESA 60

Query: 61  SSASKLVSFDSPEKPDSVISFFKNRGFSNTHISFIIGKYPRLLLSDPNKTLLPKFDFLYS 120
           SSASKLVSF SPEKPD VISFFKN GFS  +ISFII KYPR+LLS+PN TLLPK +FLY+
Sbjct: 61  SSASKLVSFTSPEKPDLVISFFKNHGFSIANISFIIWKYPRILLSNPNGTLLPKLEFLYT 120

Query: 121 KGASSSEVSKIIVKAPKILRRSVNEHLVPAFEFLKGYLQSNERTIASIKRFPSIIADFRQ 180
           +GASSSEV+KII KAPKIL RSV+EHLVPAF+FLKGYL SNERTIASIKRFPSIIAD  Q
Sbjct: 121 RGASSSEVTKIISKAPKILMRSVDEHLVPAFDFLKGYLGSNERTIASIKRFPSIIADIHQ 180

Query: 181 KQLNGSIRMLLDAGVPEANVMYFLLYQPRMFTMDLDRFREILEDVLKMGFDPSKSSFVQA 240
           KQLNGS+RMLLDAGVPEA V++FL YQPRMFTM LDRFREILEDV KMGFDPSKSSFVQA
Sbjct: 181 KQLNGSVRMLLDAGVPEARVVFFLFYQPRMFTMALDRFREILEDVKKMGFDPSKSSFVQA 240

Query: 241 VHAIRAMSKSTWERKLGIYKRWGLSEEEILAAFRSHPWCMTLSEEKIMLGMDFFVNKLGW 300
           V AIRAMSKSTW RKLGIYKRWGLSEE+ILAAFRSHPWCMTLSEEKIML MDFFVNKLGW
Sbjct: 241 VFAIRAMSKSTWVRKLGIYKRWGLSEEQILAAFRSHPWCMTLSEEKIMLAMDFFVNKLGW 300

Query: 301 EAAKVVKSPVLISFSLKKRIIPRASVLLFLFQKGLTKKKFMSVKPYMYTENQFLQKFVRP 360
           E A +V+SP+L+SFSLKKR IPRASVLLFLFQKGLTKKK M VKPYMYTE QFLQKFV P
Sbjct: 301 ETAAIVRSPLLLSFSLKKRTIPRASVLLFLFQKGLTKKKTMLVKPYMYTETQFLQKFVHP 360

Query: 361 HLEEVPQLSKLYHVNVDDGI 381
           HL+E PQLSKLY  NVD GI
Sbjct: 361 HLKEAPQLSKLYRENVDGGI 380

[Close]

BLAST of Lcy01g001400 vs. ExPASy TrEMBL
Match: A0A6J1EUW1 (transcription termination factor MTERF6, chloroplastic/mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111436816 PE=3 SV=1)

HSP 1 Score: 624.0 bits (1608), Expect = 4.1e-175
Identity = 316/380 (83.16%), Postives = 338/380 (88.95%), Query Frame = 0


Query: 1   MSNFLCKTLIQVRHLISISPSPNLRCVQLLHFNYSTSVSDSHSFTVSYLINSCSFSPESA 60
           MSNFLCKTL+QVRHL +ISP P LRCVQ LHFNYST  SDSHSFTVSYLINSCS SPESA
Sbjct: 1   MSNFLCKTLLQVRHLTTISPYPKLRCVQSLHFNYSTVASDSHSFTVSYLINSCSLSPESA 60

Query: 61  SSASKLVSFDSPEKPDSVISFFKNRGFSNTHISFIIGKYPRLLLSDPNKTLLPKFDFLYS 120
           SSASKLVSF SPEKPD VISFFKN GFSN HIS IIGKYPR+LLS+PN TLLPK +FLY+
Sbjct: 61  SSASKLVSFTSPEKPDLVISFFKNHGFSNAHISLIIGKYPRMLLSNPNGTLLPKLEFLYT 120

Query: 121 KGASSSEVSKIIVKAPKILRRSVNEHLVPAFEFLKGYLQSNERTIASIKRFPSIIADFRQ 180
           +GASSSEV+ II +AP IL RSV+EHLVPAF+ LKGYL SNERTIASIKRFPS+I D RQ
Sbjct: 121 RGASSSEVATIISRAPNILTRSVDEHLVPAFDLLKGYLGSNERTIASIKRFPSVIGDIRQ 180

Query: 181 KQLNGSIRMLLDAGVPEANVMYFLLYQPRMFTMDLDRFREILEDVLKMGFDPSKSSFVQA 240
           K L+GS+ MLLDAGVPEA VMYFL YQPRMFTM LDRFREILEDV KMGFDPSKSSFVQA
Sbjct: 181 KYLSGSVTMLLDAGVPEALVMYFLFYQPRMFTMALDRFREILEDVKKMGFDPSKSSFVQA 240

Query: 241 VHAIRAMSKSTWERKLGIYKRWGLSEEEILAAFRSHPWCMTLSEEKIMLGMDFFVNKLGW 300
           VHA+R MSKSTW RKLGI+KRWGLSEE+ILAAFRSHPWCMTLSEEKIML MDFFVNKLGW
Sbjct: 241 VHAMRGMSKSTWVRKLGIFKRWGLSEEQILAAFRSHPWCMTLSEEKIMLAMDFFVNKLGW 300

Query: 301 EAAKVVKSPVLISFSLKKRIIPRASVLLFLFQKGLTKKKFMSVKPYMYTENQFLQKFVRP 360
           E A +V+SP+L+SFSLKKR IPRASVLLFLFQKGLTKKK M VKPYMYTE QFLQKFV P
Sbjct: 301 ETAAIVRSPLLLSFSLKKRTIPRASVLLFLFQKGLTKKKTMLVKPYMYTETQFLQKFVHP 360

Query: 361 HLEEVPQLSKLYHVNVDDGI 381
           HL+E PQLSKLY  NVD GI
Sbjct: 361 HLKEAPQLSKLYRENVDGGI 380

[Close]

BLAST of Lcy01g001400 vs. ExPASy TrEMBL
Match: A0A5B7BJP6 (Uncharacterized protein OS=Davidia involucrata OX=16924 GN=Din_038518 PE=3 SV=1)

HSP 1 Score: 364.0 bits (933), Expect = 7.7e-97
Identity = 192/381 (50.39%), Postives = 257/381 (67.45%), Query Frame = 0


Query: 1   MSNFLCKTL-IQVRHLISISPSPNLRCVQ---LLHFNYSTSVSDSHSFTVSYLINSCSFS 60
           M NF+CK+L   VR  +  SP+  L  +Q   L       + S+ HSFTV+YLI+SC FS
Sbjct: 1   MFNFICKSLPSYVRCAVRTSPTHQLYFLQSRPLSSLESIPNTSNEHSFTVTYLIDSCGFS 60

Query: 61  PESASSASKLVSFDSPEKPDSVISFFKNRGFSNTHISFIIGKYPRLLLSDPNKTLLPKFD 120
           PE A SASK ++F +PEKPDSV++FFKN GF+ T IS +I   P +LLSDP KTLLPK +
Sbjct: 61  PEKALSASKYINFKTPEKPDSVLAFFKNHGFTKTQISTLIAGLPPVLLSDPKKTLLPKIE 120

Query: 121 FLYSKGASSSEVSKIIVKAPKILRRSVNEHLVPAFEFLKGYLQSNERTIASIKRFPSIIA 180
           F +SKG SS +++KII + P IL+RS+   ++P+F F    L+SNE+T A+IKRF  ++ 
Sbjct: 121 FFHSKGISSPDITKIISRTPSILKRSLENQIIPSFNFFNNLLKSNEKTTAAIKRFAGLLL 180

Query: 181 DFRQKQLNGSIRMLLDAGVPEANVMYFLLYQPRMFTMDLDRFREILEDVLKMGFDPSKSS 240
              Q  +  +I +L + GVPE+N++  L YQPR F  + DRF+EI+E+V KMGF+P +  
Sbjct: 181 YDLQTYVAHNIGILREVGVPESNIVVLLTYQPRAFMTNTDRFKEIVEEVKKMGFNPVRMK 240

Query: 241 FVQAVHAIRAMSKSTWERKLGIYKRWGLSEEEILAAFRSHPWCMTLSEEKIMLGMDFFVN 300
           FV A+HA+RAMSK TWE+K+ ++K+WG SE+EIL AF  HPWCM  SE+KI   MDFFVN
Sbjct: 241 FVIAIHALRAMSKLTWEKKVEVFKKWGWSEDEILVAFGKHPWCMMASEDKITGVMDFFVN 300

Query: 301 KLGWEAAKVVKSPVLISFSLKKRIIPRASVLLFLFQKGLTKKKFMSVKPYMYTENQFLQK 360
           K+GWE++ V + P LIS SL+KRI+PR  V   L  KGL KK F         E  FL+K
Sbjct: 301 KMGWESSIVARRPGLISLSLEKRIVPRCLVYQDLLSKGLIKKDFSLATMLECPEKLFLKK 360

Query: 361 FVRPHLEEVPQLSKLYHVNVD 378
            VR   EE P++ KLY   +D
Sbjct: 361 VVRCCKEEAPEVLKLYQEKLD 381

[Close]

BLAST of Lcy01g001400 vs. NCBI nr
Match: XP_022138367.1 (transcription termination factor MTERF6, chloroplastic/mitochondrial-like [Momordica charantia])

HSP 1 Score: 679.9 bits (1753), Expect = 1.3e-191
Identity = 344/382 (90.05%), Postives = 365/382 (95.55%), Query Frame = 0


Query: 1   MSNFLCKTLIQVRHLISISPSPNLRCVQLLHFNYST-SVSDSHSFTVSYLINSCSFSPES 60
           MSNFLCKTLI+VRHL++ SP PNLRCVQ LH +Y+T +VSDSHSFTVSYL+NSCSFSPES
Sbjct: 1   MSNFLCKTLIRVRHLLTNSPYPNLRCVQFLHVSYTTAAVSDSHSFTVSYLVNSCSFSPES 60

Query: 61  ASSASKLVSFDSPEKPDSVISFFKNRGFSNTHISFIIGKYPRLLLSDPNKTLLPKFDFLY 120
           A SASKLVSFD+ +KPDSVISFFKNRGFSN HIS IIGKYPRLLLSDPNKTLLPK +FLY
Sbjct: 61  ALSASKLVSFDARDKPDSVISFFKNRGFSNIHISLIIGKYPRLLLSDPNKTLLPKLEFLY 120

Query: 121 SKGASSSEVSKIIVKAPKILRRSVNEHLVPAFEFLKGYLQSNERTIASIKRFPSIIADFR 180
           S+GASSSEVSKIIVKAPKILRRSVN+HL+PAF+FLKGYLQSNERTIASIKRFPSIIADFR
Sbjct: 121 SRGASSSEVSKIIVKAPKILRRSVNKHLIPAFDFLKGYLQSNERTIASIKRFPSIIADFR 180

Query: 181 QKQLNGSIRMLLDAGVPEANVMYFLLYQPRMFTMDLDRFREILEDVLKMGFDPSKSSFVQ 240
           Q QLNGSIRMLLDAGVPEANVMYFLLYQPRMFTMDLDRFREILEDV+KMGFDP KSSFVQ
Sbjct: 181 QNQLNGSIRMLLDAGVPEANVMYFLLYQPRMFTMDLDRFREILEDVMKMGFDPLKSSFVQ 240

Query: 241 AVHAIRAMSKSTWERKLGIYKRWGLSEEEILAAFRSHPWCMTLSEEKIMLGMDFFVNKLG 300
           AVHAIRAMSKSTWERKL IYKRWGLSE+EI+AAFRSHPWCMTLSEEKIMLGMDFFVNKLG
Sbjct: 241 AVHAIRAMSKSTWERKLNIYKRWGLSEKEIIAAFRSHPWCMTLSEEKIMLGMDFFVNKLG 300

Query: 301 WEAAKVVKSPVLISFSLKKRIIPRASVLLFLFQKGLTKKKFMSVKPYMYTENQFLQKFVR 360
           WE+A VVKSPVL+SFSLKKR IPRASVLLFLF+KGLTKKKFM VKPYMYTE QFLQKFVR
Sbjct: 301 WESAAVVKSPVLLSFSLKKRTIPRASVLLFLFEKGLTKKKFMLVKPYMYTELQFLQKFVR 360

Query: 361 PHLEEVPQLSKLYHVNVDDGIN 382
           PHLEEVPQLSKLYHVNVDDGI+
Sbjct: 361 PHLEEVPQLSKLYHVNVDDGIH 382

[Close]

BLAST of Lcy01g001400 vs. NCBI nr
Match: XP_023000245.1 (transcription termination factor MTERF6, chloroplastic/mitochondrial-like [Cucurbita maxima])

HSP 1 Score: 637.9 bits (1644), Expect = 5.7e-179
Identity = 324/383 (84.60%), Postives = 345/383 (90.08%), Query Frame = 0


Query: 1   MSNFLCKTLIQVRHLISISPSPNLRCVQLLHFNYSTSVSDSHSFTVSYLINSCSFSPESA 60
           MSNFLCKTL+QVRHL +ISP P LRCVQ LHFNYST  SDSHSFTVSYLINSCS SPESA
Sbjct: 1   MSNFLCKTLLQVRHLTTISPYPKLRCVQSLHFNYSTVSSDSHSFTVSYLINSCSLSPESA 60

Query: 61  SSASKLVSFDSPEKPDSVISFFKNRGFSNTHISFIIGKYPRLLLSDPNKTLLPKFDFLYS 120
           SSASKLVSF SPEKPD VISFFKN GFS  HISFIIGKYPR+LLS+PN  LLP+ +FLY+
Sbjct: 61  SSASKLVSFISPEKPDLVISFFKNHGFSIAHISFIIGKYPRILLSNPNGALLPRLEFLYT 120

Query: 121 KGASSSEVSKIIVKAPKILRRSVNEHLVPAFEFLKGYLQSNERTIASIKRFPSIIADFRQ 180
           +GASSSEV+KII KAPKIL RSV+EHLVPAF+ LKGYL SNERTIASIKRFPSIIAD RQ
Sbjct: 121 RGASSSEVTKIISKAPKILMRSVDEHLVPAFDLLKGYLGSNERTIASIKRFPSIIADIRQ 180

Query: 181 KQLNGSIRMLLDAGVPEANVMYFLLYQPRMFTMDLDRFREILEDVLKMGFDPSKSSFVQA 240
           K L+GS+RMLLDAGVPEA+VMYFL YQPRMFTM LDRFREILEDV KMGFDPSKSSF+QA
Sbjct: 181 KHLSGSVRMLLDAGVPEAHVMYFLFYQPRMFTMALDRFREILEDVKKMGFDPSKSSFIQA 240

Query: 241 VHAIRAMSKSTWERKLGIYKRWGLSEEEILAAFRSHPWCMTLSEEKIMLGMDFFVNKLGW 300
           VHAIR MSKSTW RKLGIYKRWGLSEEEILAAFRSHPWCMTLSEEKIML MDFFV KLGW
Sbjct: 241 VHAIRGMSKSTWVRKLGIYKRWGLSEEEILAAFRSHPWCMTLSEEKIMLAMDFFVKKLGW 300

Query: 301 EAAKVVKSPVLISFSLKKRIIPRASVLLFLFQKGLTKKKFMSVKPYMYTENQFLQKFVRP 360
           E A +V+SPVL+SFSLKKR IPRASVLLFLFQKGLT KK M VKPYMYTE QFLQKFVRP
Sbjct: 301 ETAAIVRSPVLLSFSLKKRTIPRASVLLFLFQKGLTTKKTMLVKPYMYTETQFLQKFVRP 360

Query: 361 HLEEVPQLSKLYHVNVDDGINQL 384
           HL+E PQLSKLY +NVD GIN+L
Sbjct: 361 HLKEAPQLSKLYRINVDGGINRL 383

[Close]

BLAST of Lcy01g001400 vs. NCBI nr
Match: XP_022930344.1 (transcription termination factor MTERF6, chloroplastic/mitochondrial-like [Cucurbita moschata])

HSP 1 Score: 630.2 bits (1624), Expect = 1.2e-176
Identity = 322/380 (84.74%), Postives = 342/380 (90.00%), Query Frame = 0


Query: 1   MSNFLCKTLIQVRHLISISPSPNLRCVQLLHFNYSTSVSDSHSFTVSYLINSCSFSPESA 60
           MSNFLCKTL+QVRHL +ISP P LRCVQ LHFNYST  SDSHSFTVSYLINSCS SPESA
Sbjct: 1   MSNFLCKTLLQVRHLTTISPYPKLRCVQSLHFNYSTVASDSHSFTVSYLINSCSLSPESA 60

Query: 61  SSASKLVSFDSPEKPDSVISFFKNRGFSNTHISFIIGKYPRLLLSDPNKTLLPKFDFLYS 120
           SSASKLVSF SPEKPD VISFFKN GFS  +ISFII KYPR+LLS+PN TLLPK +FLY+
Sbjct: 61  SSASKLVSFTSPEKPDLVISFFKNHGFSIANISFIIWKYPRILLSNPNGTLLPKLEFLYT 120

Query: 121 KGASSSEVSKIIVKAPKILRRSVNEHLVPAFEFLKGYLQSNERTIASIKRFPSIIADFRQ 180
           +GASSSEV+KII KAPKIL RSV+EHLVPAF+FLKGYL SNERTIASIKRFPSIIAD  Q
Sbjct: 121 RGASSSEVTKIISKAPKILMRSVDEHLVPAFDFLKGYLGSNERTIASIKRFPSIIADIHQ 180

Query: 181 KQLNGSIRMLLDAGVPEANVMYFLLYQPRMFTMDLDRFREILEDVLKMGFDPSKSSFVQA 240
           KQLNGS+RMLLDAGVPEA V++FL YQPRMFTM LDRFREILEDV KMGFDPSKSSFVQA
Sbjct: 181 KQLNGSVRMLLDAGVPEARVVFFLFYQPRMFTMALDRFREILEDVKKMGFDPSKSSFVQA 240

Query: 241 VHAIRAMSKSTWERKLGIYKRWGLSEEEILAAFRSHPWCMTLSEEKIMLGMDFFVNKLGW 300
           V AIRAMSKSTW RKLGIYKRWGLSEE+ILAAFRSHPWCMTLSEEKIML MDFFVNKLGW
Sbjct: 241 VFAIRAMSKSTWVRKLGIYKRWGLSEEQILAAFRSHPWCMTLSEEKIMLAMDFFVNKLGW 300

Query: 301 EAAKVVKSPVLISFSLKKRIIPRASVLLFLFQKGLTKKKFMSVKPYMYTENQFLQKFVRP 360
           E A +V+SP+L+SFSLKKR IPRASVLLFLFQKGLTKKK M VKPYMYTE QFLQKFV P
Sbjct: 301 ETAAIVRSPLLLSFSLKKRTIPRASVLLFLFQKGLTKKKTMLVKPYMYTETQFLQKFVHP 360

Query: 361 HLEEVPQLSKLYHVNVDDGI 381
           HL+E PQLSKLY  NVD GI
Sbjct: 361 HLKEAPQLSKLYRENVDGGI 380

[Close]

BLAST of Lcy01g001400 vs. NCBI nr
Match: KAG6593956.1 (Transcription termination factor MTERF8, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 628.6 bits (1620), Expect = 3.5e-176
Identity = 321/380 (84.47%), Postives = 341/380 (89.74%), Query Frame = 0


Query: 1   MSNFLCKTLIQVRHLISISPSPNLRCVQLLHFNYSTSVSDSHSFTVSYLINSCSFSPESA 60
           MSNFLC+TL+QVRHL +ISP P LRCVQ LHFNYST  SDSHSFTVSYLINSCS SPESA
Sbjct: 1   MSNFLCRTLLQVRHLTTISPYPKLRCVQSLHFNYSTVASDSHSFTVSYLINSCSLSPESA 60

Query: 61  SSASKLVSFDSPEKPDSVISFFKNRGFSNTHISFIIGKYPRLLLSDPNKTLLPKFDFLYS 120
           SSASKLVSF SPEKPD VISFFKN GFS  +ISFII KYPR+LLS+PN TLLPK +FLY+
Sbjct: 61  SSASKLVSFTSPEKPDLVISFFKNHGFSIANISFIIWKYPRILLSNPNGTLLPKLEFLYT 120

Query: 121 KGASSSEVSKIIVKAPKILRRSVNEHLVPAFEFLKGYLQSNERTIASIKRFPSIIADFRQ 180
           +GASSSEV+KII KAPKIL RSV+EHLVPAF+FLKGYL SNERTIASIKRFPSIIAD  Q
Sbjct: 121 RGASSSEVTKIISKAPKILMRSVDEHLVPAFDFLKGYLGSNERTIASIKRFPSIIADVHQ 180

Query: 181 KQLNGSIRMLLDAGVPEANVMYFLLYQPRMFTMDLDRFREILEDVLKMGFDPSKSSFVQA 240
           K LNGS+RMLLDAGVPEA VM+FL YQPRMFTM LDRFREILEDV KMGFDPSKSSFVQA
Sbjct: 181 KHLNGSVRMLLDAGVPEARVMFFLFYQPRMFTMTLDRFREILEDVKKMGFDPSKSSFVQA 240

Query: 241 VHAIRAMSKSTWERKLGIYKRWGLSEEEILAAFRSHPWCMTLSEEKIMLGMDFFVNKLGW 300
           V AIRAMSKSTW RKLGIYKRWGLSEE+ILAAFRSHPWCMTLSEEKIML MDFFVNKLGW
Sbjct: 241 VFAIRAMSKSTWVRKLGIYKRWGLSEEQILAAFRSHPWCMTLSEEKIMLAMDFFVNKLGW 300

Query: 301 EAAKVVKSPVLISFSLKKRIIPRASVLLFLFQKGLTKKKFMSVKPYMYTENQFLQKFVRP 360
           E A +V+SP+L+SFSLKKR IPRASVLLFLFQKGLTKKK M VKPYMYTE QFLQKFV P
Sbjct: 301 ETAAIVRSPLLLSFSLKKRTIPRASVLLFLFQKGLTKKKTMLVKPYMYTETQFLQKFVHP 360

Query: 361 HLEEVPQLSKLYHVNVDDGI 381
           HL+E PQLSKLY  NVD GI
Sbjct: 361 HLKEAPQLSKLYRENVDGGI 380

[Close]

BLAST of Lcy01g001400 vs. NCBI nr
Match: KAG7026295.1 (Transcription termination factor MTERF8, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 627.1 bits (1616), Expect = 1.0e-175
Identity = 323/381 (84.78%), Postives = 342/381 (89.76%), Query Frame = 0


Query: 1   MSNFLCKTLIQVRHLISISPSPNLRCVQLLHFNYSTSVSDSHSFTVSYLINSCSFSPESA 60
           MSNFLCKTL+QVRHL +ISP P LRCVQ LHFNYST  SDSHSFTVSYLINSCS SPESA
Sbjct: 1   MSNFLCKTLLQVRHLTTISPYPKLRCVQSLHFNYSTVASDSHSFTVSYLINSCSLSPESA 60

Query: 61  SSASKLVSFDSPEKPDSVISFFKNRGFSNTHISFIIGKYPRLLLSDPNKTLLPKFDFLYS 120
           SSASKLVSF SPEKPD VISFFKN GFS  +ISFII KYPR+LLS+PN TLLPK +FLY+
Sbjct: 61  SSASKLVSFTSPEKPDLVISFFKNHGFSIANISFIIWKYPRILLSNPNGTLLPKLEFLYT 120

Query: 121 KGASSSEVSKIIVKAPKILRRSVNEHLVPAFEFLKGYLQSNERTIASIKRFPSIIADFRQ 180
           +GASSSEV+KII KAPKIL RSV+EHLVPAF+FLKGYL SNERTIASIKRFPSIIAD  Q
Sbjct: 121 RGASSSEVTKIISKAPKILMRSVDEHLVPAFDFLKGYLGSNERTIASIKRFPSIIADVHQ 180

Query: 181 KQLNGSIRMLLDAGVPEANVMYFLLYQPRMFTMDLDRFREILEDVLKMGFDPSKSSFVQA 240
           KQLNGS+RMLLDAGVPEA VM+FL YQPRMFTM LDRFREILEDV KMGFDPSKSSFVQA
Sbjct: 181 KQLNGSVRMLLDAGVPEARVMFFLFYQPRMFTMTLDRFREILEDVKKMGFDPSKSSFVQA 240

Query: 241 VHAIRAMSKSTWERKLGIYKRWGLSEEEILAAFRSHPWCMTLSEEKIMLGMDFFVNKLGW 300
           V AIRAMSKSTW RKLGIYKRWGLSEE+ILAAFRSHPWCMTLSEEKIML MDFFVNKLGW
Sbjct: 241 VFAIRAMSKSTWVRKLGIYKRWGLSEEQILAAFRSHPWCMTLSEEKIMLAMDFFVNKLGW 300

Query: 301 EAAKVVKSPVLISFSLKKRIIPRASVLLFLFQKGLTKKKFM-SVKPYMYTENQFLQKFVR 360
           E A +V+SP+L+SFSLKKR IPRASVLLFLFQKGLTKKK M  VKPYMYTE QFLQKFV 
Sbjct: 301 ETAAIVRSPLLLSFSLKKRTIPRASVLLFLFQKGLTKKKTMLLVKPYMYTETQFLQKFVH 360

Query: 361 PHLEEVPQLSKLYHVNVDDGI 381
           PHL+E PQLSKLY  NVD GI
Sbjct: 361 PHLKEAPQLSKLYRENVDGGI 381

[Close]

BLAST of Lcy01g001400 vs. TAIR 10
Match: AT5G07900.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 246.1 bits (627), Expect = 4.5e-65
Identity = 128/331 (38.67%), Postives = 200/331 (60.42%), Query Frame = 0


Query: 43  SFTVSYLINSCSFSPESASSASKLVSFDSPEKPDSVISFFKNRGFSNTHISFIIGKYPRL 102
           SFT++YLI+SC  SP+SA+ AS+ +  DSPE+P++V++  ++ GF+   IS ++ K P L
Sbjct: 69  SFTLNYLIDSCGLSPDSATVASRKLLLDSPERPNTVLNLLRDHGFTTAQISSLVKKRPVL 128

Query: 103 LLSDPNKTLLPKFDFLYSKGASSSEVSKIIVKAPKILRRSVNEHLVPAFEFLKGYLQSNE 162
           LL++    LLPK  F  S G S S +++ +   P IL RS+   L+P++ FLK  L S+E
Sbjct: 129 LLANAESVLLPKLSFFLSIGVSKSLLARTLASDPTILTRSLVNQLIPSYNFLKSVLDSDE 188

Query: 163 RTIASIKRFPSIIADFRQKQLNGSIRMLLDAGVPEANVMYFLLYQPRMFTMDLDRFREIL 222
           + +A+++R   +  +   K L  +I  + + GVPE  +   L + P         F+ I 
Sbjct: 189 KIVAALRRTTWVFLEDHTKNLVPNINYMAETGVPEKCIKLLLTHFPEAVMQKNHEFQAIA 248

Query: 223 EDVLKMGFDPSKSSFVQAVHAIRAM-SKSTWERKLGIYKRWGLSEEEILAAFRSHPWCMT 282
           +   +MGF+P KS+FV A+HA+    +KS W++   +Y+RWG SE++I+ AF+ HP CM 
Sbjct: 249 KQAQEMGFNPQKSTFVLAIHALSGKGNKSIWDKCFEVYQRWGWSEDDIMCAFKKHPHCMM 308

Query: 283 LSEEKIMLGMDFFVNKLGWEAAKVVKSPVLISFSLKKRIIPRASVLLFLFQKGLTKKKFM 342
           LSE KI   M++FVN++      + + PV++ FSL+KRIIPR SV   L   GL K+ + 
Sbjct: 309 LSERKINRTMEYFVNEMNMAPRSIAQCPVVLFFSLEKRIIPRCSVTKVLVSNGLVKEDWS 368

Query: 343 SVKPYMYTENQFLQKFVRPHLEEVPQLSKLY 373
                +  E  FL+K V  + EE+P+L  LY
Sbjct: 369 LTSLLVPVEKVFLEKLVIKYEEELPELMNLY 399

[Close]

BLAST of Lcy01g001400 vs. TAIR 10
Match: AT1G21150.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 215.7 bits (548), Expect = 6.5e-56
Identity = 121/334 (36.23%), Postives = 196/334 (58.68%), Query Frame = 0


Query: 43  SFTVSYLINSCSFSPESASSASKLVSFDSPEKPDSVISFFKNRGFSNTHISFIIGKYPRL 102
           SFTVSYL++SC  S ESA S S+ V   S +KPDSV++ FK+ GF+N  I+ +I  +PR+
Sbjct: 56  SFTVSYLVDSCGLSLESAKSNSRFVKLVSSKKPDSVLALFKDHGFTNDQITSVIKSFPRV 115

Query: 103 LLSDPNKTLLPKFDFLYSKGASSSEVSKIIVKAPKILRRSVNEHLVPAFEFLKGYLQSNE 162
           L   P   + PK  F  S G S+S+ +K+I  +PK+L  S+++ L+P ++ LK  L   E
Sbjct: 116 LSLSPEDVISPKLMFFSSIGFSTSDTAKMISSSPKMLSYSLHKRLIPCYDSLKSILVEEE 175

Query: 163 RTIASIKRFPSIIADFRQKQLNGSIRMLLDAGVPEANVMYFLLYQPRMFTMDLDRFREIL 222
             +  +KR     +      ++  + +  + GVP+ ++ + +   P  F     RF E+L
Sbjct: 176 SVVKCLKRGIRCFSLKITHCVSLRVSICRELGVPDKSIKWLVQASPFTFFSRERRFNEVL 235

Query: 223 EDVLKMGFDPSKSSFVQAVHAIRAMSKSTWERKLGIYKRWGLSEEEILAAFRSHPWCMTL 282
             V   GFDP K+ FV A+ A    S+S  ERK  +++ +G S+E+ +AA    P C+T+
Sbjct: 236 NRVCSYGFDPKKAGFVHAMVAFDCTSESAMERKFKLFQCFGWSKEDFVAAIMRFPNCVTV 295

Query: 283 SEEKIMLGMDFFVNKLGWEAAKVVKSPVLISFSLKKRIIPRASVLLFLFQKGLTKKKFMS 342
           S+EKIM  +++ VN +G +A  +V  PV++S S++KRI PR  V+  L  KGL KK+ ++
Sbjct: 296 SDEKIMYTLEYLVNNIGLQARDIVARPVVLSLSMEKRIKPRNQVISLLLSKGLVKKEDIN 355

Query: 343 VKPYM-YTENQFLQKFVRPHLEEVPQLSKLYHVN 376
               +    ++F+ KFV  + +E+PQL + +  N
Sbjct: 356 YFTILKLKSSEFMDKFVLKYQDEMPQLVQPFTSN 389

[Close]

BLAST of Lcy01g001400 vs. TAIR 10
Match: AT3G46950.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 178.7 bits (452), Expect = 8.8e-45
Identity = 129/416 (31.01%), Postives = 204/416 (49.04%), Query Frame = 0


Query: 35  STSVSDS----HSFTVSYLINSCSFSPESASSASKLVSFDSPEKPDSVISFFKNRGFSNT 94
           ST   DS     +FTVSYL+ S   + + A + SK V+F+    PDSV++  ++ GF ++
Sbjct: 40  STIAKDSSPKGSTFTVSYLVESLGLTKKLAETISKKVTFEDKVNPDSVLNLLRSNGFKDS 99

Query: 95  HISFIIGKYPRLLLSDPNKTLLPKFDFLYSKGASSSEVSKIIVKAPKILRRSVNEHLVPA 154
            IS II  YPRLL++D  K+L PK  FL S+GASSSEV +I+   P IL +   E +   
Sbjct: 100 QISRIIRAYPRLLVTDAEKSLRPKLQFLKSRGASSSEVIEIVSNVPTILDKKGEESVSLY 159

Query: 155 FEFLKGYLQSNERTIASIKRFPSIIADFRQKQLNGSIRMLLDAGVPEANVMYFLL--YQP 214
           ++F+K  +Q  +    S         + ++     +I +L + GVP+  +   L+  YQP
Sbjct: 160 YDFVKDIMQDGKSLCIS-------CPEGKKGNRIRNISVLRELGVPQKLLFSLLISRYQP 219

Query: 215 RMFTMDLDRFREILEDVLKMGFDPSKSSFVQAVHAIRAMSKSTWERKLGIYKR------- 274
                  ++F E L+ V+ MGFDP+KS FV+A+H +  MS+ T E K+ +YKR       
Sbjct: 220 ---VCGKEKFEESLKKVVDMGFDPAKSKFVEALHVVYEMSEKTIEEKVNVYKRLGFSEAE 279

Query: 275 -------W---------------------GLSEEEILAAFRSHPWCMTLSEEKIM----- 334
                  W                     GL EEEI++  +S P C+  SE+KI+     
Sbjct: 280 IWAIFKKWPYFLKFSEKKIILMFETLKKCGLVEEEIISVLKSRPQCIRSSEQKILDSIEM 339

Query: 335 -LGMDF-----------------------------FVNKLGWEAAKVVKSPVLISFSLKK 374
            LG+ F                              V  + W    VV  P ++ +SL+K
Sbjct: 340 FLGLGFSRDDFKMMVKRYPCCTAYSGETLRKKFEVLVKMMNWPLEAVVMIPTVLGYSLEK 399

[Close]

BLAST of Lcy01g001400 vs. TAIR 10
Match: AT1G61970.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 177.2 bits (448), Expect = 2.6e-44
Identity = 117/376 (31.12%), Postives = 195/376 (51.86%), Query Frame = 0


Query: 42  HSFTVSYLINSCSFSPESASSASKLVSFDSPEKPDSVISFFKNRGFSNTHISFIIGKYPR 101
           ++FTVSYL++S   + + A S S+ VSF+    PDSV++   + GF+ + IS II  YP+
Sbjct: 51  NNFTVSYLVDSLGLTTKLAESISRKVSFEDKNNPDSVLNLLTSHGFTGSQISTIIRDYPQ 110

Query: 102 LLLSDPNKTLLPKFDFLYSKGASSSEVSKIIVKAPKILRRSVNEHLVPAFEFLKGYL--- 161
           LL++D  K+L PK  FL S+GASSSE+++I+   P+IL +  ++ +   ++F+K  L   
Sbjct: 111 LLIADAEKSLGPKLQFLQSRGASSSEITEIVSSVPEILGKKGHKTISVYYDFIKDTLLEK 170

Query: 162 -QSNERTIASIKRFPSIIADFRQKQLNGSIRMLLDAGVPEANVMYFLLYQPRMFTMDLDR 221
              NE+   S+ +      +   K  N S+  L + G+P   +++ LL          ++
Sbjct: 171 SSKNEKLCHSLPQ-----GNLENKIRNVSV--LRELGMPH-KLLFSLLISDSQPVCGKEK 230

Query: 222 FREILEDVLKMGFDPSKSSFVQAVHAIRAMSKSTWERKLGIY--------------KRW- 281
           F E L+ V++MGFDP+ S FV+A+  I  M++ T E K+ +Y              K+W 
Sbjct: 231 FEETLKKVVEMGFDPTTSKFVEALQVIYKMNEKTIEEKVHLYKSLGFDVGDVWSSFKKWP 290

Query: 282 --------------------GLSEEEILAAFRSHPWCMTLSEEKIMLGMDFFVNKLGWEA 341
                               G S +E     +  P C+ LS E +    +F V K+ W  
Sbjct: 291 ISLRVSEKKMLDSIETFLGLGFSRDEFAKMVKHFPPCIGLSTETVKKKTEFLVKKMNWPL 350

Query: 342 AKVVKSPVLISFSLKKRIIPRASVLLFLFQKGLTKKKFMSVK-PYMYTENQFLQKFVRPH 376
             VV +P +  +SL+KRI+PR +V+  L  KGL + +  S+    M T+  FL ++V  H
Sbjct: 351 KAVVSNPAVFGYSLEKRIVPRGNVIKALMSKGLMRNELPSISCVLMCTKQVFLNRYVANH 410

[Close]

BLAST of Lcy01g001400 vs. TAIR 10
Match: AT1G61970.2 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 177.2 bits (448), Expect = 2.6e-44
Identity = 117/376 (31.12%), Postives = 195/376 (51.86%), Query Frame = 0


Query: 42  HSFTVSYLINSCSFSPESASSASKLVSFDSPEKPDSVISFFKNRGFSNTHISFIIGKYPR 101
           ++FTVSYL++S   + + A S S+ VSF+    PDSV++   + GF+ + IS II  YP+
Sbjct: 51  NNFTVSYLVDSLGLTTKLAESISRKVSFEDKNNPDSVLNLLTSHGFTGSQISTIIRDYPQ 110

Query: 102 LLLSDPNKTLLPKFDFLYSKGASSSEVSKIIVKAPKILRRSVNEHLVPAFEFLKGYL--- 161
           LL++D  K+L PK  FL S+GASSSE+++I+   P+IL +  ++ +   ++F+K  L   
Sbjct: 111 LLIADAEKSLGPKLQFLQSRGASSSEITEIVSSVPEILGKKGHKTISVYYDFIKDTLLEK 170

Query: 162 -QSNERTIASIKRFPSIIADFRQKQLNGSIRMLLDAGVPEANVMYFLLYQPRMFTMDLDR 221
              NE+   S+ +      +   K  N S+  L + G+P   +++ LL          ++
Sbjct: 171 SSKNEKLCHSLPQ-----GNLENKIRNVSV--LRELGMPH-KLLFSLLISDSQPVCGKEK 230

Query: 222 FREILEDVLKMGFDPSKSSFVQAVHAIRAMSKSTWERKLGIY--------------KRW- 281
           F E L+ V++MGFDP+ S FV+A+  I  M++ T E K+ +Y              K+W 
Sbjct: 231 FEETLKKVVEMGFDPTTSKFVEALQVIYKMNEKTIEEKVHLYKSLGFDVGDVWSSFKKWP 290

Query: 282 --------------------GLSEEEILAAFRSHPWCMTLSEEKIMLGMDFFVNKLGWEA 341
                               G S +E     +  P C+ LS E +    +F V K+ W  
Sbjct: 291 ISLRVSEKKMLDSIETFLGLGFSRDEFAKMVKHFPPCIGLSTETVKKKTEFLVKKMNWPL 350

Query: 342 AKVVKSPVLISFSLKKRIIPRASVLLFLFQKGLTKKKFMSVK-PYMYTENQFLQKFVRPH 376
             VV +P +  +SL+KRI+PR +V+  L  KGL + +  S+    M T+  FL ++V  H
Sbjct: 351 KAVVSNPAVFGYSLEKRIVPRGNVIKALMSKGLMRNELPSISCVLMCTKQVFLNRYVANH 410

The following BLAST results are available for this feature:

BLAST of Lcy01g001400 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FK23	1.2e-17	23.88	Transcription termination factor MTERF8, chloroplastic OS=Arabidopsis thaliana O...	[more]
Q9SZL6	3.1e-10	23.36	Transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Arabidop...	[more]
Q9FM80	3.2e-07	22.87	Transcription termination factor MTERF9, chloroplastic OS=Arabidopsis thaliana O...	[more]
Q84X53	4.2e-07	27.45	Transcription termination factor MTEF1, chloroplastic OS=Arabidopsis thaliana OX...	[more]

BLAST of Lcy01g001400 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CAW8	6.3e-192	90.05	transcription termination factor MTERF6, chloroplastic/mitochondrial-like OS=Mom...	[more]
A0A6J1KHT4	2.8e-179	84.60	transcription termination factor MTERF6, chloroplastic/mitochondrial-like OS=Cuc...	[more]
A0A6J1ER69	5.7e-177	84.74	transcription termination factor MTERF6, chloroplastic/mitochondrial-like OS=Cuc...	[more]
A0A6J1EUW1	4.1e-175	83.16	transcription termination factor MTERF6, chloroplastic/mitochondrial-like OS=Cuc...	[more]
A0A5B7BJP6	7.7e-97	50.39	Uncharacterized protein OS=Davidia involucrata OX=16924 GN=Din_038518 PE=3 SV=1	[more]

BLAST of Lcy01g001400 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022138367.1	1.3e-191	90.05	transcription termination factor MTERF6, chloroplastic/mitochondrial-like [Momor...	[more]
XP_023000245.1	5.7e-179	84.60	transcription termination factor MTERF6, chloroplastic/mitochondrial-like [Cucur...	[more]
XP_022930344.1	1.2e-176	84.74	transcription termination factor MTERF6, chloroplastic/mitochondrial-like [Cucur...	[more]
KAG6593956.1	3.5e-176	84.47	Transcription termination factor MTERF8, chloroplastic, partial [Cucurbita argyr...	[more]
KAG7026295.1	1.0e-175	84.78	Transcription termination factor MTERF8, chloroplastic, partial [Cucurbita argyr...	[more]

BLAST of Lcy01g001400 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G07900.1	4.5e-65	38.67	Mitochondrial transcription termination factor family protein	[more]
AT1G21150.1	6.5e-56	36.23	Mitochondrial transcription termination factor family protein	[more]
AT3G46950.1	8.8e-45	31.01	Mitochondrial transcription termination factor family protein	[more]
AT1G61970.1	2.6e-44	31.12	Mitochondrial transcription termination factor family protein	[more]
AT1G61970.2	2.6e-44	31.12	Mitochondrial transcription termination factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 380..383
None	No IPR available	PANTHER	PTHR13068:SF160	TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN, PUTATIVE ISOFORM 1-RELATED	coord: 26..376
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	SMART	SM00733	mt_12	coord: 302..336 e-value: 200.0 score: 9.3 coord: 93..124 e-value: 0.0051 score: 26.0 coord: 165..196 e-value: 1300.0 score: 3.0 coord: 270..301 e-value: 0.21 score: 20.7 coord: 129..161 e-value: 0.24 score: 20.5 coord: 201..231 e-value: 900.0 score: 4.3 coord: 235..265 e-value: 2800.0 score: 0.4
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PFAM	PF02536	mTERF	coord: 247..336 e-value: 2.1E-12 score: 46.6 coord: 79..287 e-value: 5.4E-27 score: 94.5
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PANTHER	PTHR13068	CGI-12 PROTEIN-RELATED	coord: 26..376
IPR038538	MTERF superfamily, mitochondrial/chloroplastic	GENE3D	1.25.70.10	Transcription termination factor 3, mitochondrial	coord: 160..371 e-value: 4.3E-38 score: 133.0

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy01g001400.1	Lcy01g001400.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006353	DNA-templated transcription, termination
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003690	double-stranded DNA binding