Lag0042140 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0042140
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Reverse transcriptase
Location	chr13: 37118466 .. 37119479 (-)
RNA-Seq Expression	Lag0042140
Synteny	Lag0042140

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTATGGGATAGAACGACTGAAGAAGTTAAGAGCCACAGTGTTTGAGGGTTCCACAGATTCAGCTGACACCAAGGTCTGGTTAAATATGCTGGAGAAATGCTTCGACGTGATGAGTTGTCATGAGGAGCGAAAAGTCATATTAGCTACATTCCTTCTGCAAATGAGGCGGAGGGATGGTGGAAATCCATTTTAGCCAGGCGCAGTGATGCACGTACGTTAGACTGGTAGACTTTCAAAGCATATTCGAGGACAAGTATTATCCCAGCACATACTGTGAAGCAAAGAGAGATGAGTTTCTGGGGTTGAAGCAGGGTCACTTTCACTGGCCGAGTACGAGAGAAAGTATACCGAGCTTTCACGGTATGCCGATGTGATTGTGACATCTGAGAGTGACAGGTGTGAAGGTTTGAAAGAGGGCTCCATTTTGAGATACGTACCCCGGTTACAGCTATTTCCAAGTGGATGGATTTTTCCCAGCTAGTAAAGACTGCCTTACGTGTGGAGCAGAGTATAACAGAGGAAAAGTCGGCAGTGGAGCCTAGTCATGGGGCTTCAACAGCTAGTGGTTTCCGAGGTCGTGAGCAGCGGAGGTTCACACCTGGAGTGAATGTTTCAGGTCGTCAAGACTTTAAGCGTCGGTCTGGTGGCAGTGTCGAGGTAGATGAGTTTAGGTAGTGCCTATCAGAGGCAGAGTCAGAGAGTCCCCAGTCAGTCTGCGGGTTCAGTAGAAAGACTGCGGACGGGTCAGGAGTCCGTTGCTAGTGAATTCAGGAGAACCCCATGTGCAAGTTGTGGCAAGAATCATCGGGGTTAGTGTCTTGTTGGTGCCAGTGTGTGTTACCAGTGTGGACAACCAGGGCATTTCAAGAGGGATTGTCCACAGCTAAGAGCAGCAGTTCAGAGGGACCAGGGAGTTGAGTCCCACATAGTTGAGCAACCGAGAGTCTCAGCAGCCGCAAGAGAGGGCACCAGTGGTGCAAGGCAGAAGGGAGTTGTGGGGAGACCTAGGTAG

mRNA sequence

ATGTATGGGATAGAACGACTGAAGAAGTTAAGAGCCACAGTGTTTGAGGGTTCCACAGATTCAGCTGACACCAAGGTCTGGTTAAATATGCTGGAGAAATGCTTCGACGTGATGAGTTGTCATGAGGAGCGAAAAGTCATATTAGCTACATTCCTTCTGCAAATGAGGCGGAGGGATGGGTCACTTTCACTGGCCGAGTACGAGAGAAAGTATACCGAGCTTTCACGGTATGCCGATGTGATTGTGACATCTGAGAGTGACAGGTGTGAAGTAAAGACTGCCTTACGTGTGGAGCAGAGTATAACAGAGGAAAAGTCGGCAGTGGAGCCTAGTCATGGGGCTTCAACAGCTAGTGGTTTCCGAGGTCGTGAGCAGCGGAGGTTCACACCTGGAGTGAATGTTTCAGGTCGTCAAGACTTTAAGCGTCGGTCTGGTGGCAGTGTCGAGTGTGGACAACCAGGGCATTTCAAGAGGGATTGTCCACAGCTAAGAGCAGCAGTTCAGAGGGACCAGGGAGTTGAGTCCCACATAGTTGAGCAACCGAGAGTCTCAGCAGCCGCAAGAGAGGGCACCAGTGGTGCAAGGCAGAAGGGAGTTGTGGGGAGACCTAGGTAG

Coding sequence (CDS)

ATGTATGGGATAGAACGACTGAAGAAGTTAAGAGCCACAGTGTTTGAGGGTTCCACAGATTCAGCTGACACCAAGGTCTGGTTAAATATGCTGGAGAAATGCTTCGACGTGATGAGTTGTCATGAGGAGCGAAAAGTCATATTAGCTACATTCCTTCTGCAAATGAGGCGGAGGGATGGGTCACTTTCACTGGCCGAGTACGAGAGAAAGTATACCGAGCTTTCACGGTATGCCGATGTGATTGTGACATCTGAGAGTGACAGGTGTGAAGTAAAGACTGCCTTACGTGTGGAGCAGAGTATAACAGAGGAAAAGTCGGCAGTGGAGCCTAGTCATGGGGCTTCAACAGCTAGTGGTTTCCGAGGTCGTGAGCAGCGGAGGTTCACACCTGGAGTGAATGTTTCAGGTCGTCAAGACTTTAAGCGTCGGTCTGGTGGCAGTGTCGAGTGTGGACAACCAGGGCATTTCAAGAGGGATTGTCCACAGCTAAGAGCAGCAGTTCAGAGGGACCAGGGAGTTGAGTCCCACATAGTTGAGCAACCGAGAGTCTCAGCAGCCGCAAGAGAGGGCACCAGTGGTGCAAGGCAGAAGGGAGTTGTGGGGAGACCTAGGTAG

Protein sequence

MYGIERLKKLRATVFEGSTDSADTKVWLNMLEKCFDVMSCHEERKVILATFLLQMRRRDGSLSLAEYERKYTELSRYADVIVTSESDRCEVKTALRVEQSITEEKSAVEPSHGASTASGFRGREQRRFTPGVNVSGRQDFKRRSGGSVECGQPGHFKRDCPQLRAAVQRDQGVESHIVEQPRVSAAAREGTSGARQKGVVGRPR

Homology

[Close]

BLAST of Lag0042140 vs. NCBI nr
Match: KAA0043142.1 (Gag protease polyprotein-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 278.1 bits (710), Expect = 6.1e-71
Identity = 167/277 (60.29%), Postives = 175/277 (63.18%), Query Frame = 0


Query: 2   YGIERLKKLRATVFEGSTDSADTKVWLNMLEKCFDVMSCHEERKVILATFLLQ------- 61
           YGIERLKKL ATVFEGSTD AD + WLNMLEKCFDVM+C EERKV LATFLLQ       
Sbjct: 64  YGIERLKKLGATVFEGSTDPADAENWLNMLEKCFDVMNCPEERKVRLATFLLQKEAEGWW 123

Query: 62  ----MRRRD-----------------------------------GSLSLAEYERKYTELS 121
                RR D                                   GSLS+AEYERKYTELS
Sbjct: 124 KSILARRSDARALDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYTELS 183

Query: 122 RYADVIVTSESDRCE--------------------------VKTALRVEQSITEEKSAVE 181
           RYADVI+ SESDRC                           V+TALRVEQSITEEKSAVE
Sbjct: 184 RYADVIIVSESDRCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKSAVE 243

Query: 182 PSHGASTASGFRGREQRRFTPGVNVSGRQDFKRRSGG--SVECGQPGHFKRDCPQLRAAV 205
            S G STASGFRGREQRRFTPG+N+S RQDFK RSGG  S  CGQPGHFK+DCPQL   V
Sbjct: 244 LSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNCGQPGHFKKDCPQLNMTV 303

[Close]

BLAST of Lag0042140 vs. NCBI nr
Match: KAA0044257.1 (Gag protease polyprotein-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 272.7 bits (696), Expect = 2.6e-69
Identity = 162/277 (58.48%), Postives = 174/277 (62.82%), Query Frame = 0


Query: 2   YGIERLKKLRATVFEGSTDSADTKVWLNMLEKCFDVMSCHEERKVILATFLLQ------- 61
           Y IERLKKL ATVFEGSTD AD + WLNMLEKCFDVM+C EERKV LATFLLQ       
Sbjct: 64  YEIERLKKLGATVFEGSTDPADAENWLNMLEKCFDVMNCPEERKVRLATFLLQKEAEGWW 123

Query: 62  ---------------------------------------MRRRDGSLSLAEYERKYTELS 121
                                                  M  + GSLS+AEYERKYTELS
Sbjct: 124 KSILARRSDARALDWQTFRGIFEDKYYPSTYCEAKRDEFMGLKQGSLSVAEYERKYTELS 183

Query: 122 RYADVIVTSESDRCE--------------------------VKTALRVEQSITEEKSAVE 181
           RYADVIV SES+RC+                          V+TALRVEQSIT+EKSAVE
Sbjct: 184 RYADVIVASESNRCQRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITQEKSAVE 243

Query: 182 PSHGASTASGFRGREQRRFTPGVNVSGRQDFKRRSGG--SVECGQPGHFKRDCPQLRAAV 205
            S G STASGFRGREQRRFTPG+N+S RQDFK RSGG  S  CGQPGHFK+DCPQL   V
Sbjct: 244 LSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNCGQPGHFKKDCPQLNMTV 303

[Close]

BLAST of Lag0042140 vs. NCBI nr
Match: KAA0061627.1 (putative polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 261.5 bits (667), Expect = 5.9e-66
Identity = 165/309 (53.40%), Postives = 175/309 (56.63%), Query Frame = 0


Query: 2   YGIERLKKLRATVFEGSTDSADTKVWLNMLEKCFDVMSCHEERKVILATFLLQ------- 61
           YGIERLKKL ATVFEGSTD AD + WLNMLEKCFDV++C EERKV LATFLLQ       
Sbjct: 49  YGIERLKKLGATVFEGSTDPADAENWLNMLEKCFDVINCPEERKVRLATFLLQKEAEGWW 108

Query: 62  ----MRRRD-----------------------------------GSLSLAEYERKYTELS 121
                RR D                                   GSLS+AEYERKYTELS
Sbjct: 109 KSILARRSDARALDWQTFRGIFEDKYYPSTYCEAKKDEFLGLKQGSLSVAEYERKYTELS 168

Query: 122 RYADVIVTSESDRCE--------------------------VKTALRVEQSITEEKSAVE 181
           RYADVIV SESDRC                           V+T+LRV+QSITEEKSAVE
Sbjct: 169 RYADVIVASESDRCRRFERGLRFEIRTPVTAVAKWTNFSQLVETSLRVQQSITEEKSAVE 228

Query: 182 PSHGASTASGFRGREQRRFTPGVNVSGRQDFKRRSGGSV--------------------- 205
            S G STASGFRGREQRRFTPGVN+S RQDFK RSGG V                     
Sbjct: 229 LSRGTSTASGFRGREQRRFTPGVNISSRQDFKNRSGGQVSRNESIASTVRQIPCTSCGRN 288

[Close]

BLAST of Lag0042140 vs. NCBI nr
Match: KAA0042309.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 259.6 bits (662), Expect = 2.2e-65
Identity = 163/309 (52.75%), Postives = 172/309 (55.66%), Query Frame = 0


Query: 2   YGIERLKKLRATVFEGSTDSADTKVWLNMLEKCFDVMSCHEERKVILATFLLQ------- 61
           YGIERLKKL ATVFEG TD  D + WLNM EKCFDVM+C EERKV LATFLLQ       
Sbjct: 71  YGIERLKKLGATVFEGFTDPGDAENWLNMPEKCFDVMNCPEERKVRLATFLLQKEAEGWW 130

Query: 62  ----MRRRD-----------------------------------GSLSLAEYERKYTELS 121
                RR D                                   GSLS+AEYERKYTELS
Sbjct: 131 KSILARRSDARALDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYTELS 190

Query: 122 RYADVIVTSESDRCE--------------------------VKTALRVEQSITEEKSAVE 181
           RYADVI+ SESDRC                           V+TALRVEQSITEEKSAVE
Sbjct: 191 RYADVIIASESDRCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKSAVE 250

Query: 182 PSHGASTASGFRGREQRRFTPGVNVSGRQDFKRRSGGSV--------------------- 205
            S G STASGFRGREQRRFTPG+N+S RQDFK RSGG                       
Sbjct: 251 LSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNESIASTVRRIPCTSCGRN 310

[Close]

BLAST of Lag0042140 vs. NCBI nr
Match: KAA0060066.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 258.1 bits (658), Expect = 6.5e-65
Identity = 164/309 (53.07%), Postives = 172/309 (55.66%), Query Frame = 0


Query: 2   YGIERLKKLRATVFEGSTDSADTKVWLNMLEKCFDVMSCHEERKVILATFLLQ------- 61
           YGIERLKKL ATVFEGSTD AD + WLNMLEKCFDVM+C EERKV LATFLLQ       
Sbjct: 102 YGIERLKKLGATVFEGSTDPADVENWLNMLEKCFDVMNCPEERKVRLATFLLQKEAEGWW 161

Query: 62  ----MRRRD-----------------------------------GSLSLAEYERKYTELS 121
                RR D                                   GSLS+AEYERKYTELS
Sbjct: 162 KSILARRSDARALDWQTFRGIFEDKYYPSTYCEAKRNEFLGLKQGSLSVAEYERKYTELS 221

Query: 122 RYADVIVTSESDRCE--------------------------VKTALRVEQSITEEKSAVE 181
           RYADVIV SESDRC                           V+TALRVEQSITEEKSAVE
Sbjct: 222 RYADVIVASESDRCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKSAVE 281

Query: 182 PSHGASTASGFRGREQRRFTPGVNVSGRQDFKRRSGGSV--------------------- 205
            S G S ASGFRGREQRRFTP +N+S RQDFK RSGG                       
Sbjct: 282 LSRGTSAASGFRGREQRRFTPEINISSRQDFKNRSGGQASRNESITSTVRRTPCTSCGRN 341

[Close]

BLAST of Lag0042140 vs. ExPASy TrEMBL
Match: A0A5A7TIK0 (Gag protease polyprotein-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold332G00290 PE=4 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 3.0e-71
Identity = 167/277 (60.29%), Postives = 175/277 (63.18%), Query Frame = 0


Query: 2   YGIERLKKLRATVFEGSTDSADTKVWLNMLEKCFDVMSCHEERKVILATFLLQ------- 61
           YGIERLKKL ATVFEGSTD AD + WLNMLEKCFDVM+C EERKV LATFLLQ       
Sbjct: 64  YGIERLKKLGATVFEGSTDPADAENWLNMLEKCFDVMNCPEERKVRLATFLLQKEAEGWW 123

Query: 62  ----MRRRD-----------------------------------GSLSLAEYERKYTELS 121
                RR D                                   GSLS+AEYERKYTELS
Sbjct: 124 KSILARRSDARALDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYTELS 183

Query: 122 RYADVIVTSESDRCE--------------------------VKTALRVEQSITEEKSAVE 181
           RYADVI+ SESDRC                           V+TALRVEQSITEEKSAVE
Sbjct: 184 RYADVIIVSESDRCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKSAVE 243

Query: 182 PSHGASTASGFRGREQRRFTPGVNVSGRQDFKRRSGG--SVECGQPGHFKRDCPQLRAAV 205
            S G STASGFRGREQRRFTPG+N+S RQDFK RSGG  S  CGQPGHFK+DCPQL   V
Sbjct: 244 LSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNCGQPGHFKKDCPQLNMTV 303

[Close]

BLAST of Lag0042140 vs. ExPASy TrEMBL
Match: A0A5A7TQW1 (Gag protease polyprotein-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold2741G00150 PE=4 SV=1)

HSP 1 Score: 272.7 bits (696), Expect = 1.2e-69
Identity = 162/277 (58.48%), Postives = 174/277 (62.82%), Query Frame = 0


Query: 2   YGIERLKKLRATVFEGSTDSADTKVWLNMLEKCFDVMSCHEERKVILATFLLQ------- 61
           Y IERLKKL ATVFEGSTD AD + WLNMLEKCFDVM+C EERKV LATFLLQ       
Sbjct: 64  YEIERLKKLGATVFEGSTDPADAENWLNMLEKCFDVMNCPEERKVRLATFLLQKEAEGWW 123

Query: 62  ---------------------------------------MRRRDGSLSLAEYERKYTELS 121
                                                  M  + GSLS+AEYERKYTELS
Sbjct: 124 KSILARRSDARALDWQTFRGIFEDKYYPSTYCEAKRDEFMGLKQGSLSVAEYERKYTELS 183

Query: 122 RYADVIVTSESDRCE--------------------------VKTALRVEQSITEEKSAVE 181
           RYADVIV SES+RC+                          V+TALRVEQSIT+EKSAVE
Sbjct: 184 RYADVIVASESNRCQRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITQEKSAVE 243

Query: 182 PSHGASTASGFRGREQRRFTPGVNVSGRQDFKRRSGG--SVECGQPGHFKRDCPQLRAAV 205
            S G STASGFRGREQRRFTPG+N+S RQDFK RSGG  S  CGQPGHFK+DCPQL   V
Sbjct: 244 LSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNCGQPGHFKKDCPQLNMTV 303

[Close]

BLAST of Lag0042140 vs. ExPASy TrEMBL
Match: A0A5A7V411 (Putative polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold3980G00110 PE=4 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 2.9e-66
Identity = 165/309 (53.40%), Postives = 175/309 (56.63%), Query Frame = 0


Query: 2   YGIERLKKLRATVFEGSTDSADTKVWLNMLEKCFDVMSCHEERKVILATFLLQ------- 61
           YGIERLKKL ATVFEGSTD AD + WLNMLEKCFDV++C EERKV LATFLLQ       
Sbjct: 49  YGIERLKKLGATVFEGSTDPADAENWLNMLEKCFDVINCPEERKVRLATFLLQKEAEGWW 108

Query: 62  ----MRRRD-----------------------------------GSLSLAEYERKYTELS 121
                RR D                                   GSLS+AEYERKYTELS
Sbjct: 109 KSILARRSDARALDWQTFRGIFEDKYYPSTYCEAKKDEFLGLKQGSLSVAEYERKYTELS 168

Query: 122 RYADVIVTSESDRCE--------------------------VKTALRVEQSITEEKSAVE 181
           RYADVIV SESDRC                           V+T+LRV+QSITEEKSAVE
Sbjct: 169 RYADVIVASESDRCRRFERGLRFEIRTPVTAVAKWTNFSQLVETSLRVQQSITEEKSAVE 228

Query: 182 PSHGASTASGFRGREQRRFTPGVNVSGRQDFKRRSGGSV--------------------- 205
            S G STASGFRGREQRRFTPGVN+S RQDFK RSGG V                     
Sbjct: 229 LSRGTSTASGFRGREQRRFTPGVNISSRQDFKNRSGGQVSRNESIASTVRQIPCTSCGRN 288

[Close]

BLAST of Lag0042140 vs. ExPASy TrEMBL
Match: A0A5A7TLU6 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold824G001060 PE=4 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 1.1e-65
Identity = 163/309 (52.75%), Postives = 172/309 (55.66%), Query Frame = 0


Query: 2   YGIERLKKLRATVFEGSTDSADTKVWLNMLEKCFDVMSCHEERKVILATFLLQ------- 61
           YGIERLKKL ATVFEG TD  D + WLNM EKCFDVM+C EERKV LATFLLQ       
Sbjct: 71  YGIERLKKLGATVFEGFTDPGDAENWLNMPEKCFDVMNCPEERKVRLATFLLQKEAEGWW 130

Query: 62  ----MRRRD-----------------------------------GSLSLAEYERKYTELS 121
                RR D                                   GSLS+AEYERKYTELS
Sbjct: 131 KSILARRSDARALDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYTELS 190

Query: 122 RYADVIVTSESDRCE--------------------------VKTALRVEQSITEEKSAVE 181
           RYADVI+ SESDRC                           V+TALRVEQSITEEKSAVE
Sbjct: 191 RYADVIIASESDRCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKSAVE 250

Query: 182 PSHGASTASGFRGREQRRFTPGVNVSGRQDFKRRSGGSV--------------------- 205
            S G STASGFRGREQRRFTPG+N+S RQDFK RSGG                       
Sbjct: 251 LSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNESIASTVRRIPCTSCGRN 310

[Close]

BLAST of Lag0042140 vs. ExPASy TrEMBL
Match: A0A5A7V0R0 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold160G00330 PE=4 SV=1)

HSP 1 Score: 258.1 bits (658), Expect = 3.2e-65
Identity = 164/309 (53.07%), Postives = 172/309 (55.66%), Query Frame = 0


Query: 2   YGIERLKKLRATVFEGSTDSADTKVWLNMLEKCFDVMSCHEERKVILATFLLQ------- 61
           YGIERLKKL ATVFEGSTD AD + WLNMLEKCFDVM+C EERKV LATFLLQ       
Sbjct: 102 YGIERLKKLGATVFEGSTDPADVENWLNMLEKCFDVMNCPEERKVRLATFLLQKEAEGWW 161

Query: 62  ----MRRRD-----------------------------------GSLSLAEYERKYTELS 121
                RR D                                   GSLS+AEYERKYTELS
Sbjct: 162 KSILARRSDARALDWQTFRGIFEDKYYPSTYCEAKRNEFLGLKQGSLSVAEYERKYTELS 221

Query: 122 RYADVIVTSESDRCE--------------------------VKTALRVEQSITEEKSAVE 181
           RYADVIV SESDRC                           V+TALRVEQSITEEKSAVE
Sbjct: 222 RYADVIVASESDRCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKSAVE 281

Query: 182 PSHGASTASGFRGREQRRFTPGVNVSGRQDFKRRSGGSV--------------------- 205
            S G S ASGFRGREQRRFTP +N+S RQDFK RSGG                       
Sbjct: 282 LSRGTSAASGFRGREQRRFTPEINISSRQDFKNRSGGQASRNESITSTVRRTPCTSCGRN 341

The following BLAST results are available for this feature:

BLAST of Lag0042140 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0043142.1	6.1e-71	60.29	Gag protease polyprotein-like protein [Cucumis melo var. makuwa]	[more]
KAA0044257.1	2.6e-69	58.48	Gag protease polyprotein-like protein [Cucumis melo var. makuwa]	[more]
KAA0061627.1	5.9e-66	53.40	putative polyprotein [Cucumis melo var. makuwa]	[more]
KAA0042309.1	2.2e-65	52.75	reverse transcriptase [Cucumis melo var. makuwa]	[more]
KAA0060066.1	6.5e-65	53.07	DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]	[more]

BLAST of Lag0042140 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Lag0042140 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TIK0	3.0e-71	60.29	Gag protease polyprotein-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A5A7TQW1	1.2e-69	58.48	Gag protease polyprotein-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A5A7V411	2.9e-66	53.40	Putative polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold398...	[more]
A0A5A7TLU6	1.1e-65	52.75	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82...	[more]
A0A5A7V0R0	3.2e-65	53.07	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold16...	[more]

BLAST of Lag0042140 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	4.10.60.10		coord: 148..204 e-value: 2.9E-5 score: 26.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 181..204
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 103..153
IPR001878	Zinc finger, CCHC-type	PFAM	PF00098	zf-CCHC	coord: 150..162 e-value: 2.1E-5 score: 24.4
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 150..162 score: 8.910993
IPR036875	Zinc finger, CCHC-type superfamily	SUPERFAMILY	57756	Retrovirus zinc finger-like domains	coord: 131..166

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0042140.1	Lag0042140.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003824	catalytic activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding