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Lag0041486 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGACTGATTTGGGTACTTTGCGATATTTTCTTGGCCTTGAAATCTCTCATACTTCTAATGGTTTTTTGGTACATCAAACTAATTATACCAGGGATGTTCTCAAACGTTTTGGTATGCTTAATGAAAAATCTTGTGGTACTTCTTTGGCTTTACAGTCTCCTACTGATGCTGGAAATGTTTGCTCTCCTGATGATAGTCGTAATTACAGGGCTCTTATTGGTGCTCTTCATTACTGGAATTTTAGTCTACGAGATATCTCGTTTGTTGTTAGCAAGCTTTCTCAATTTCTGCATTCTCCTCATGATTCTCATCTTGTGGCTGCTAAAAGAGTGTTGCGTTATCTAGCTGGTTCTATTGGCTTCAGCATTATGTTTCGAAAAGGATCTTCTTCTTTTGCTCGGTTGCATGCTTATTCTTATTCAGATTGGGCTGGTGACCCTCTTTATCGTTGTTCCACGTCTGGCTTTGTAATTTTCCTTGGTTCTAATCTTATTTCATGGAGATCTAAGAAACAATCTACCGTTTCTCGTAGCTCTCTACAGAGGCTGAATAACGAGCATTAGCTTCCACTACAGCTAAAGTTTGTTGGATTCATCAGGTGTGTCAAGATCTTCATGTCTATAGTTATGAACCTCCTATTTTATTATGTGACAATATCTCTGCTATTCAATTGGCTCGTGATCCTGCTTTTCATGGTCGTACTAAGCATGTGGAGATTGATTTCCACTTTGTTCGTGAACAAGTTGTTCGAAAAAGATTTCGAGCTTCGGTATGTTTCTTCTGCCCAGCAACTTGCTGATCTTTTCACCAAGGCTCACACTAGCTTATGACTTGCTACTCTTTGTTCCAAACTCATGTCCTCTTCAGTGGCATTCATTTGAGGAGGGATGATAACTGATTATTGTTGATTATTGTTATTTTGTTGTATATTTACACAATTAGTTATTCATTTGTTATCTTTAGTATTTTTAGGTTTACTCCGTTTCTATAATCTGTACTCTTCAGCATTTAAAAGGCTTGTATTATGTTTTTTGAGATATTAAAAGATATTCTCTCAAAGTTTGAAAGATTATTTACAACCCGTACACTTGCGGTAAGTAATTTTTGCAGCATAATTCCATCGTAAATTGGGATTTGAATTTTGTTTTTGTAATGAATGGTGTCGTTAATGAGACATAGGACATATTAGGAATTTCCTATATAGTTAAAAGATAATAATTTGATTAAAGACAGTTACAAATTTAGTCAATTTTAGGTCAAAGCGAGCCTAGTTCAGCGGTAATTGGCATGTACCCTCAACCATGAGGTCAGAGGTTCGAATCCCCCACCCTCAAATGTTGATGTACTAAAAAAAAAAGAAAAAAAATTAGTCCATTTTAGTATGTGCCTCTTTAGTTTCTAAAGTACATGAAAAAAAAAAATCTTTATCTTTATCTTTACTACTTAAAAAATGGCTAACTTGGAGAATCATTTTTGGACTATTTTGTCCAAATACAAATTCTTTTATTCCATATGTGTCCTTTAATTAATTATTATTTCTATTTTTAAAATGGTTTTAAATTGATAAATAATGTGTTAATAGGAATTTGAATTTTTTTTTTTTTTTTTTTAATGTTTCAAATTTTTTTTATACTCTTCAATATGTTAACGTTAATTAATTTAGTAAAACTGTTGGTTTTTGTTGTGCCAGCAGAATTTAGACTTTTCTTTTATCTTTTATTTATTTTTCTAATTCATTTATACCTACTTTCTTTTATACTTTTTTAATATGTTAATGTTAATTAATTAAGTAAAACTTTTGGTTTTTTTTACCGGCAAAATTTAGATTTTTCTTCTCTTTCTCTCTCTCTCTTTTTTTTCTAATTCATTTACACCTTCTTTAATATATGTTAATTATTAATTAATTTAATATGTTATTTATTAAGGGATTAATTTGGTACACTCATTTGGTTCCTTTATTTTTTTTTTAAACGGTAGACTTAATTTTTTTTCTAATTTATTTATACTTGTTGAAGGAGAAATTTCGGCCAATCACAAATTGCCACGTCATTAATATAAATTAATGATAAAATAAATTTGGGACCAATTACACAATTACACGTGTGCCTAAATTAAATTAATAGACATTAAAATTCGGTAAATCAAAGAATGCCACTTGTCTATTAGTGATCGATCGGATGACATAAGCCAAGTCCAATCAAATTATGCCATGTGGCAATTGGACCCAAGCCCAAACCCATATGGGGTCCATCAAACTCTATAAATAGAGGAGGCCACCATTCATTTGAGAGGGGATTCAGCCAGAGGGAGAGAACTCAGAGTCCAGAGCATTCTACCAGAGTCCAGAGTCGGCAGGCCGATCATCCAAGAGGATCAACAAGCTAACAAGCTGATCCAACAGATCATCAAGCTAACAGGCCGATCCAAGAGATCAACAGGCCAACCGACCGATCAAGAAGATCAACAAGTCAGCAGGCCGATCATCCAAGAAGATCAACAAGCCAACCGACCGATCAAGAAGATCAACAAGTCAGCAGGCCGATCATCCAAGAAGATCAACAAGCCAACCGATCGATCAAGAGGATCAATAAGTCAGCAGACCGATCATCCAAAAGGATCAAAAAGCTAACAAGTCGATCCAACAGATCATCAAGCCAACAGGCCGATCCAAGAGATCATCAAGTTAACAGGCCGATCATCCAAGAAGATCAACAAGCCAACAAATCGATCCAAGAGATCATCAAGCCAACAGGCCGATCATTCAAGAAGATCAACAAGCCAACAAGCCGATCCAAGAGATCATCAAGCCACCAGGTTGATCATCCAAGAAGATCAACAAGCCAACAAGCCGATCCAAGAGATCATCAAGCCAACAGGCCGATCATCCAAGAATATCAACAAGCCAACAAGCTGATCCAAGAGATCATCAAGCCAACAGGCCGATCATCCAAGAAGATTAACAAACCAACAAGCTGA ATGACTGATTTGGGTACTTTGCGATATTTTCTTGGCCTTGAAATCTCTCATACTTCTAATGGTTTTTTGGTACATCAAACTAATTATACCAGGGATGTTCTCAAACGTTTTGGTATGCTTAATGAAAAATCTTGTGGTACTTCTTTGGCTTTACAGTCTCCTACTGATGCTGGAAATGTTTGCTCTCCTGATGATAGTCGTAATTACAGGGCTCTTATTGGTGCTCTTCATTACTGGAATTTTAGTCTACGAGATATCTCGTTTGTTGTTAGCAAGCTTTCTCAATTTCTGCATTCTCCTCATGATTCTCATCTTGTGGCTGCTAAAAGAGTGTTGCGTTATCTAGCTGGTTCTATTGGCTTCAGCATTATGTTTCGAAAAGGATCTTCTTCTTTTGCTCGGTTGCATGCTTATTCTTATTCAGATTGGGCTGGTGACCCTCTTTATCGTTGTTCCACGTCTGGCTTTGTAATTTTCCTTGGTTCTAATCTTATTTCATGGAGATCTAAGAAACAATCTACCGTGTGTCAAGATCTTCATGTCTATAGTTATGAACCTCCTATTTTATTATGTGACAATATCTCTGCTATTCAATTGGCTCGTGATCCTGCTTTTCATGGTCGTACTAAGCATGTGGAGATTGATTTCCACTTTGTTCGTGAACAAGTTGTTCGAAAAAGATTTCGAGCTTCGGTCAAAGCGAGCCTAGTTCAGCGGCCGATCCAAGAGATCAACAGGCCAACCGACCGATCAAGAAGATCAACAAGTCAGCAGGCCGATCATCCAAGAAGATCAACAAGCCAACCGACCGATCAAGAAGATCAACAAGTCAGCAGGCCGATCATCCAAGAAGATCAACAAGCCAACCGATCGATCAAGAGGATCAATAAGTCAGCAGACCGATCATCCAAAAGGATCAAAAAGCTAACAAGTCGATCCAACAGATCATCAAGCCAACAGGCCGATCCAAGAGATCATCAAGTTAACAGGCCGATCATCCAAGAAGATCAACAAGCCAACAAATCGATCCAAGAGATCATCAAGCCAACAGGCCGATCATTCAAGAAGATCAACAAGCCAACAAGCCGATCCAAGAGATCATCAAGCCACCAGGTTGATCATCCAAGAAGATCAACAAGCCAACAAGCCGATCCAAGAGATCATCAAGCCAACAGGCCGATCATCCAAGAATATCAACAAGCCAACAAGCTGATCCAAGAGATCATCAAGCCAACAGGCCGATCATCCAAGAAGATTAACAAACCAACAAGCTGA ATGACTGATTTGGGTACTTTGCGATATTTTCTTGGCCTTGAAATCTCTCATACTTCTAATGGTTTTTTGGTACATCAAACTAATTATACCAGGGATGTTCTCAAACGTTTTGGTATGCTTAATGAAAAATCTTGTGGTACTTCTTTGGCTTTACAGTCTCCTACTGATGCTGGAAATGTTTGCTCTCCTGATGATAGTCGTAATTACAGGGCTCTTATTGGTGCTCTTCATTACTGGAATTTTAGTCTACGAGATATCTCGTTTGTTGTTAGCAAGCTTTCTCAATTTCTGCATTCTCCTCATGATTCTCATCTTGTGGCTGCTAAAAGAGTGTTGCGTTATCTAGCTGGTTCTATTGGCTTCAGCATTATGTTTCGAAAAGGATCTTCTTCTTTTGCTCGGTTGCATGCTTATTCTTATTCAGATTGGGCTGGTGACCCTCTTTATCGTTGTTCCACGTCTGGCTTTGTAATTTTCCTTGGTTCTAATCTTATTTCATGGAGATCTAAGAAACAATCTACCGTGTGTCAAGATCTTCATGTCTATAGTTATGAACCTCCTATTTTATTATGTGACAATATCTCTGCTATTCAATTGGCTCGTGATCCTGCTTTTCATGGTCGTACTAAGCATGTGGAGATTGATTTCCACTTTGTTCGTGAACAAGTTGTTCGAAAAAGATTTCGAGCTTCGGTCAAAGCGAGCCTAGTTCAGCGGCCGATCCAAGAGATCAACAGGCCAACCGACCGATCAAGAAGATCAACAAGTCAGCAGGCCGATCATCCAAGAAGATCAACAAGCCAACCGACCGATCAAGAAGATCAACAAGTCAGCAGGCCGATCATCCAAGAAGATCAACAAGCCAACCGATCGATCAAGAGGATCAATAAGTCAGCAGACCGATCATCCAAAAGGATCAAAAAGCTAACAAGTCGATCCAACAGATCATCAAGCCAACAGGCCGATCCAAGAGATCATCAAGTTAACAGGCCGATCATCCAAGAAGATCAACAAGCCAACAAATCGATCCAAGAGATCATCAAGCCAACAGGCCGATCATTCAAGAAGATCAACAAGCCAACAAGCCGATCCAAGAGATCATCAAGCCACCAGGTTGATCATCCAAGAAGATCAACAAGCCAACAAGCCGATCCAAGAGATCATCAAGCCAACAGGCCGATCATCCAAGAATATCAACAAGCCAACAAGCTGATCCAAGAGATCATCAAGCCAACAGGCCGATCATCCAAGAAGATTAACAAACCAACAAGCTGA MTDLGTLRYFLGLEISHTSNGFLVHQTNYTRDVLKRFGMLNEKSCGTSLALQSPTDAGNVCSPDDSRNYRALIGALHYWNFSLRDISFVVSKLSQFLHSPHDSHLVAAKRVLRYLAGSIGFSIMFRKGSSSFARLHAYSYSDWAGDPLYRCSTSGFVIFLGSNLISWRSKKQSTVCQDLHVYSYEPPILLCDNISAIQLARDPAFHGRTKHVEIDFHFVREQVVRKRFRASVKASLVQRPIQEINRPTDRSRRSTSQQADHPRRSTSQPTDQEDQQVSRPIIQEDQQANRSIKRINKSADRSSKRIKKLTSRSNRSSSQQADPRDHQVNRPIIQEDQQANKSIQEIIKPTGRSFKKINKPTSRSKRSSSHQVDHPRRSTSQQADPRDHQANRPIIQEYQQANKLIQEIIKPTGRSSKKINKPTS Homology
BLAST of Lag0041486 vs. NCBI nr
Match: XP_022143489.1 (uncharacterized protein LOC111013365 [Momordica charantia]) HSP 1 Score: 292.0 bits (746), Expect = 8.5e-75 Identity = 152/251 (60.56%), Postives = 183/251 (72.91%), Query Frame = 0
BLAST of Lag0041486 vs. NCBI nr
Match: XP_022152156.1 (uncharacterized protein LOC111019945 [Momordica charantia]) HSP 1 Score: 278.9 bits (712), Expect = 7.4e-71 Identity = 141/251 (56.18%), Postives = 176/251 (70.12%), Query Frame = 0
BLAST of Lag0041486 vs. NCBI nr
Match: XP_022143496.1 (uncharacterized protein LOC111013373 [Momordica charantia]) HSP 1 Score: 227.6 bits (579), Expect = 2.0e-55 Identity = 125/251 (49.80%), Postives = 151/251 (60.16%), Query Frame = 0
BLAST of Lag0041486 vs. NCBI nr
Match: TQD72972.1 (hypothetical protein C1H46_041487 [Malus baccata]) HSP 1 Score: 215.3 bits (547), Expect = 1.0e-51 Identity = 116/247 (46.96%), Postives = 149/247 (60.32%), Query Frame = 0
BLAST of Lag0041486 vs. NCBI nr
Match: XP_022154318.1 (uncharacterized protein LOC111021613 [Momordica charantia]) HSP 1 Score: 215.3 bits (547), Expect = 1.0e-51 Identity = 107/193 (55.44%), Postives = 135/193 (69.95%), Query Frame = 0
BLAST of Lag0041486 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1) HSP 1 Score: 172.9 bits (437), Expect = 7.5e-42 Identity = 96/269 (35.69%), Postives = 136/269 (50.56%), Query Frame = 0
BLAST of Lag0041486 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1) HSP 1 Score: 171.8 bits (434), Expect = 1.7e-41 Identity = 96/270 (35.56%), Postives = 137/270 (50.74%), Query Frame = 0
BLAST of Lag0041486 vs. ExPASy Swiss-Prot
Match: P92519 (Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 GN=AtMg00810 PE=4 SV=1) HSP 1 Score: 126.7 bits (317), Expect = 6.2e-28 Identity = 74/206 (35.92%), Postives = 108/206 (52.43%), Query Frame = 0
BLAST of Lag0041486 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3) HSP 1 Score: 113.6 bits (283), Expect = 5.4e-24 Identity = 78/257 (30.35%), Postives = 119/257 (46.30%), Query Frame = 0
BLAST of Lag0041486 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1) HSP 1 Score: 108.6 bits (270), Expect = 1.7e-22 Identity = 86/290 (29.66%), Postives = 134/290 (46.21%), Query Frame = 0
BLAST of Lag0041486 vs. ExPASy TrEMBL
Match: A0A6J1CPG5 (uncharacterized protein LOC111013365 OS=Momordica charantia OX=3673 GN=LOC111013365 PE=4 SV=1) HSP 1 Score: 292.0 bits (746), Expect = 4.1e-75 Identity = 152/251 (60.56%), Postives = 183/251 (72.91%), Query Frame = 0
BLAST of Lag0041486 vs. ExPASy TrEMBL
Match: A0A6J1DGS4 (uncharacterized protein LOC111019945 OS=Momordica charantia OX=3673 GN=LOC111019945 PE=4 SV=1) HSP 1 Score: 278.9 bits (712), Expect = 3.6e-71 Identity = 141/251 (56.18%), Postives = 176/251 (70.12%), Query Frame = 0
BLAST of Lag0041486 vs. ExPASy TrEMBL
Match: A0A6J1CQE8 (uncharacterized protein LOC111013373 OS=Momordica charantia OX=3673 GN=LOC111013373 PE=4 SV=1) HSP 1 Score: 227.6 bits (579), Expect = 9.5e-56 Identity = 125/251 (49.80%), Postives = 151/251 (60.16%), Query Frame = 0
BLAST of Lag0041486 vs. ExPASy TrEMBL
Match: A0A2N9F8I7 (Reverse transcriptase Ty1/copia-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS11071 PE=4 SV=1) HSP 1 Score: 226.1 bits (575), Expect = 2.8e-55 Identity = 114/251 (45.42%), Postives = 157/251 (62.55%), Query Frame = 0
BLAST of Lag0041486 vs. ExPASy TrEMBL
Match: A0A2N9HLR0 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS40770 PE=4 SV=1) HSP 1 Score: 226.1 bits (575), Expect = 2.8e-55 Identity = 114/251 (45.42%), Postives = 157/251 (62.55%), Query Frame = 0
BLAST of Lag0041486 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 ) HSP 1 Score: 144.8 bits (364), Expect = 1.6e-34 Identity = 86/249 (34.54%), Postives = 130/249 (52.21%), Query Frame = 0
BLAST of Lag0041486 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein ) HSP 1 Score: 126.7 bits (317), Expect = 4.4e-29 Identity = 74/206 (35.92%), Postives = 108/206 (52.43%), Query Frame = 0
BLAST of Lag0041486 vs. TAIR 10
Match: ATMG00240.1 (Gag-Pol-related retrotransposon family protein ) HSP 1 Score: 49.3 bits (116), Expect = 8.9e-06 Identity = 26/79 (32.91%), Postives = 46/79 (58.23%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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