Homology
BLAST of Lag0041193 vs. NCBI nr
Match:
KAA0048297.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])
HSP 1 Score: 559.3 bits (1440), Expect = 3.9e-155
Identity = 323/605 (53.39%), Postives = 407/605 (67.27%), Query Frame = 0
Query: 2 STESSTSASMEETANPSSQTFSPGNKISIVKLTDDNFLLWKFQILMALEG-------SSS 61
ST S E ++P +Q F GNKIS+VKL DD FLLWKFQIL ALE S
Sbjct: 3 STSSLLGVENTEASSPINQIFGSGNKISLVKLNDDTFLLWKFQILTALEAYDLENFLESE 62
Query: 62 AEPVRQ-------------ETLNPAYTLWKKQDRMISSWLVGSMSEEILHQMIHCTSSKE 121
+EP + T NPAY +WK+QDR+ISSWL+GSMSEEIL+QM+HC S+KE
Sbjct: 63 SEPPSKYLISTESSSASATGTPNPAYKVWKRQDRLISSWLLGSMSEEILNQMLHCKSAKE 122
Query: 122 IWVSLKQIFTTRNLAQMMKIKTKLQTIQKGGMSLKEYFSKIQQYIDALAVVGKPVEVEDH 181
IW +L+ IF++R LAQ M+ K KL I+KG M LKEYF KI Q +DALA + KPV +DH
Sbjct: 123 IWETLQGIFSSRYLAQAMQFKNKLHNIKKGSMPLKEYFLKILQCVDALASINKPVSSDDH 182
Query: 182 ILFILAGLGSEYESMVFVISAKIGPQTVQEVMSLLLTQENRIESKIASTESSLPSANLMV 241
IL+ILAGLGS+Y+SM+ VISA+ +VQEVMSLLLTQE++ ESK+ S E++LPS N++
Sbjct: 183 ILYILAGLGSDYQSMISVISARTDSPSVQEVMSLLLTQESQNESKLIS-ETALPSVNIVT 242
Query: 242 HS--KPPESDLQKSNTNHFSPNPGSGNRGRGGGRGGFNTNRGGRSWNNRNRPQCQVCGKF 301
+ K ES + ++N N++ N R GGRG +NRG R NRN+PQCQ+C K
Sbjct: 243 QTTEKGAESYI-RTNQNNYHNNHSYNQR---GGRGNGRSNRGRR--GNRNKPQCQICAKL 302
Query: 302 NHTAPKCFFRYAPFGSSN--TPGSFSPNFNQFNRPPSYPQMEAMVTSPDLNQDTNWYPDS 361
++A +CFFRY P +S+ +P S + ++ N ++PQM AMV + DLN D+NWYPDS
Sbjct: 303 GYSADRCFFRYTPRSNSSGYSPNSHNTSYTNMN---NHPQMSAMVAALDLNIDSNWYPDS 362
Query: 362 GATNHLTHSFNNLSIGTEYGGGNQVHVGNGAGLPILNFSFTSFSSHVCSNRIFRLNNLLH 421
GATNHLTHS +NLSIG+EYGGGNQ++ NG+GLPI ++ SF+S + F LNNLL
Sbjct: 363 GATNHLTHSLSNLSIGSEYGGGNQIYAANGSGLPITHYGSMSFNSSTLPFKSFTLNNLLQ 422
Query: 422 VSSITKNLISVSQFAKDNGVYFEFHPTLCYVKDQVFGQVLLQGTLHDGLYRSHLYSSSLV 481
V SITKNLISVSQFAKDN V+FEFHPTLCYVKD GQVLLQG L+DGLY+ +
Sbjct: 423 VPSITKNLISVSQFAKDNHVFFEFHPTLCYVKDLDTGQVLLQGLLNDGLYK------FTI 482
Query: 482 EPQDKL--PVQALTSQLF--LSPSNVNCFVFDLWHRRLGHSSLSTVKSVIQRFNPRLLIN 541
EP K + T +F + P + N + DLWHRRLGH L VK+V+ +
Sbjct: 483 EPSHKRLHHSNSNTKPVFNTVVPKS-NTPLLDLWHRRLGHPHLPIVKAVLNHIDNSSGTI 542
Query: 542 NKFQFCSACAMGKVHNLPFHNSTTVYTAPLQLIIVTDLWGPTYIPSSQGYRYCISFIDAF 579
NK FC ACA+GK H LPF +S T+YT PLQL I DLWGP S G+RY ISF+DA+
Sbjct: 543 NKLNFCEACALGKHHALPFSHSLTLYTHPLQL-ITCDLWGPAVNVSHNGFRYYISFVDAY 589
BLAST of Lag0041193 vs. NCBI nr
Match:
TYK10642.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])
HSP 1 Score: 559.3 bits (1440), Expect = 3.9e-155
Identity = 323/605 (53.39%), Postives = 407/605 (67.27%), Query Frame = 0
Query: 2 STESSTSASMEETANPSSQTFSPGNKISIVKLTDDNFLLWKFQILMALEG-------SSS 61
ST S E ++P +Q F GNKIS+VKL DD FLLWKFQIL ALE S
Sbjct: 3 STSSLLGVENTEASSPINQIFGSGNKISLVKLNDDTFLLWKFQILTALEAYDLENFLESE 62
Query: 62 AEPVRQ-------------ETLNPAYTLWKKQDRMISSWLVGSMSEEILHQMIHCTSSKE 121
+EP + T NPAY +WK+QDR+ISSWL+GSMSEEIL+QM+HC S+KE
Sbjct: 63 SEPPSKYLISTESSSASATGTPNPAYKVWKRQDRLISSWLLGSMSEEILNQMLHCKSAKE 122
Query: 122 IWVSLKQIFTTRNLAQMMKIKTKLQTIQKGGMSLKEYFSKIQQYIDALAVVGKPVEVEDH 181
IW +L+ IF++R LAQ M+ K KL I+KG M LKEYF KI Q +DALA + KPV +DH
Sbjct: 123 IWETLQGIFSSRYLAQAMQFKNKLHNIKKGSMPLKEYFLKILQCVDALASINKPVSSDDH 182
Query: 182 ILFILAGLGSEYESMVFVISAKIGPQTVQEVMSLLLTQENRIESKIASTESSLPSANLMV 241
IL+ILAGLGS+Y+SM+ VISA+ +VQEVMSLLLTQE++ ESK+ S E++LPS N++
Sbjct: 183 ILYILAGLGSDYQSMISVISARTDSPSVQEVMSLLLTQESQNESKLIS-ETALPSVNIVT 242
Query: 242 HS--KPPESDLQKSNTNHFSPNPGSGNRGRGGGRGGFNTNRGGRSWNNRNRPQCQVCGKF 301
+ K ES + ++N N++ N R GGRG +NRG R NRN+PQCQ+C K
Sbjct: 243 QTTEKGAESYI-RTNQNNYHNNHSYNQR---GGRGNGRSNRGRR--GNRNKPQCQICAKL 302
Query: 302 NHTAPKCFFRYAPFGSSN--TPGSFSPNFNQFNRPPSYPQMEAMVTSPDLNQDTNWYPDS 361
++A +CFFRY P +S+ +P S + ++ N ++PQM AMV + DLN D+NWYPDS
Sbjct: 303 GYSADRCFFRYTPRSNSSGYSPNSHNTSYTNMN---NHPQMSAMVAALDLNIDSNWYPDS 362
Query: 362 GATNHLTHSFNNLSIGTEYGGGNQVHVGNGAGLPILNFSFTSFSSHVCSNRIFRLNNLLH 421
GATNHLTHS +NLSIG+EYGGGNQ++ NG+GLPI ++ SF+S + F LNNLL
Sbjct: 363 GATNHLTHSLSNLSIGSEYGGGNQIYAANGSGLPITHYGSMSFNSSTLPFKSFTLNNLLQ 422
Query: 422 VSSITKNLISVSQFAKDNGVYFEFHPTLCYVKDQVFGQVLLQGTLHDGLYRSHLYSSSLV 481
V SITKNLISVSQFAKDN V+FEFHPTLCYVKD GQVLLQG L+DGLY+ +
Sbjct: 423 VPSITKNLISVSQFAKDNHVFFEFHPTLCYVKDLDTGQVLLQGLLNDGLYK------FTI 482
Query: 482 EPQDKL--PVQALTSQLF--LSPSNVNCFVFDLWHRRLGHSSLSTVKSVIQRFNPRLLIN 541
EP K + T +F + P + N + DLWHRRLGH L VK+V+ +
Sbjct: 483 EPSHKRLHHSNSNTKPVFNTVVPKS-NTPLLDLWHRRLGHPHLPIVKAVLNHIDNSSGTI 542
Query: 542 NKFQFCSACAMGKVHNLPFHNSTTVYTAPLQLIIVTDLWGPTYIPSSQGYRYCISFIDAF 579
NK FC ACA+GK H LPF +S T+YT PLQL I DLWGP S G+RY ISF+DA+
Sbjct: 543 NKLNFCEACALGKHHALPFSHSLTLYTHPLQL-ITCDLWGPAVNVSHNGFRYYISFVDAY 589
BLAST of Lag0041193 vs. NCBI nr
Match:
RVW60229.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera])
HSP 1 Score: 397.1 bits (1019), Expect = 2.6e-106
Identity = 241/615 (39.19%), Postives = 351/615 (57.07%), Query Frame = 0
Query: 23 SPGNKISIVKLTDDNFLLWKFQILMALEG--------SSSAEPVRQET-------LNPAY 82
SP +++ ++L DDNFL+WK+QI A+ G + P + T NP +
Sbjct: 144 SPLSQLITMRLEDDNFLMWKYQIENAVRGYGLEGFLFGTEQVPPKMVTDKIGVLVPNPKF 203
Query: 83 TLWKKQDRMISSWLVGSMSEEILHQMIHCTSSKEIWVSLKQIFTTRNLAQMMKIKTKLQT 142
+++QD ++ SWL+ S+ L Q++ C+S+ E+W ++ Q F +++ A++M K+++Q
Sbjct: 204 RDYQRQDHLLISWLLSSIGSAFLPQVVGCSSAFEVWNTISQNFNSQSSAKVMFYKSQMQM 263
Query: 143 IQKGGMSLKEYFSKIQQYIDALAVVGKPVEVEDHILFILAGLGSEYESMVFVISAKIGPQ 202
++K G+++++Y +K++ Y D LA G + DHIL I+ GLG EYES++ VIS+K
Sbjct: 264 LKKDGLTMRDYLTKMKNYCDLLATAGHKISDTDHILAIMQGLGDEYESVIAVISSKKSSP 323
Query: 203 TVQEVMSLLLTQENRIESKIASTESSLPSANLMVHSKPPESDLQKSNTNHFSPNPGSGNR 262
++Q V S L+ E RI KI+S + S+ + + P S N+N + P+ G NR
Sbjct: 324 SLQYVTSTLIAHEGRIAHKISSNDLSVNYTSQYSNRGPSSS----WNSNGY-PSSGFQNR 383
Query: 263 GRGGG----RGGFNTNRG---GRSWNNRNRPQCQVCGKFNHTAPKCFFRYAPFGSSNTP- 322
+ GG RG F NRG GR+ +PQCQ+C KF HT +CF+RY P N P
Sbjct: 384 NQFGGNQVTRGSFVHNRGRGRGRA-QGGIKPQCQLCNKFGHTVHRCFYRYDPNFHGNMPA 443
Query: 323 -----------------GSFSP----NFNQFNRPPS--YPQMEAMVTSPDLNQDTNWYPD 382
GS S N +++ + Y +MEAMV +P+ Q+ W+PD
Sbjct: 444 NGPTPGVLGSGARNGASGSISSAGNVNLTEYDAQENQDYSEMEAMVATPEDLQNCCWFPD 503
Query: 383 SGATNHLTHSFNNLSIGTEYGGGNQVHVGNGAGLPILNFSFTSFSSHVCSNRIFRLNNLL 442
SGATNH+TH NL+ G EY G +++H+GNG GL I + + F S N++ L N+L
Sbjct: 504 SGATNHVTHDLGNLNSGAEYNGNSKIHMGNGTGLKISHIGLSVFPSSSSPNKVLFLKNIL 563
Query: 443 HVSSITKNLISVSQFAKDNGVYFEFHPTLCYVKDQVFGQVLLQGTLHDGLYRSHL----- 502
V +I KNL+SVSQFA+DN VYFEFHP +C+VKD+ +LLQG LH GLY+ +L
Sbjct: 564 RVPAIKKNLLSVSQFARDNNVYFEFHPKVCFVKDKSNHSLLLQGNLHKGLYQFNLSKKLF 623
Query: 503 -YSSSLVEPQDKLPVQALTSQL-------FLSPSNVNCFVFDLWHRRLGHSSLSTVKSVI 562
+S L DK + + L F +N + VFDLWH+RLGH + V V+
Sbjct: 624 GKASGLSLSNDKNELTCCNASLVHNDNSDFPEKTNSSFHVFDLWHKRLGHPASKIVTQVL 683
Query: 563 QRFNPRLLINNKFQFCSACAMGKVHNLPFHNSTTVYTAPLQLIIVTDLWGPTYIPSSQGY 579
+ CSAC +GK HNLPF S TVYT PLQL +V+DLWGP I SS G+
Sbjct: 684 NDNKIPFSTKSGSSICSACQLGKSHNLPFPISQTVYTKPLQL-VVSDLWGPAPINSSYGF 743
BLAST of Lag0041193 vs. NCBI nr
Match:
KZV26181.1 (hypothetical protein F511_06348 [Dorcoceras hygrometricum])
HSP 1 Score: 396.7 bits (1018), Expect = 3.3e-106
Identity = 227/524 (43.32%), Postives = 318/524 (60.69%), Query Frame = 0
Query: 61 ETLNPAYTLWKKQDRMISSWLVGSMSEEILHQMIHCTSSKEIWVSLKQIFTTRNLAQMMK 120
E +NP + W +QD+++ S+L+ SMSE QMI C +S ++W + Q+F TR+ A++M+
Sbjct: 9 EVMNPNFVTWNRQDQLLFSFLLASMSESAQSQMIGCQTSSQLWTRVTQLFATRSKARVMQ 68
Query: 121 IKTKLQTIQKGGMSLKEYFSKIQQYIDALAVVGKPVEVEDHILFILAGLGSEYESMVFVI 180
K +LQT++KG +S+K+Y K++ YID LA G + +D IL IL G+G EYES+V +
Sbjct: 69 YKLQLQTLKKGNLSMKDYLGKMKGYIDILAACGNSIPEDDQILHILGGVGPEYESVVVHV 128
Query: 181 SAKIGPQTVQEVMSLLLTQENRIES-KIASTESSLPSANLMVHSKPPESDLQKSNTNHFS 240
++++ ++ EV +LLL E RIE+ I ++ PS N+ S + NT+
Sbjct: 129 TSRVESLSLSEVGALLLAHEGRIETYNITGGHTASPSVNVTT----APSQRKAENTSQSQ 188
Query: 241 PNPGSGNRGRGGGRGGFNTNRGGRS-WNNRNRPQCQVCGKFNHTAPKCFFRYAPFGSSNT 300
P RGRG GR G RGGR W+N RP CQ+CG H A C++R+ +
Sbjct: 189 P----VYRGRGRGRNG----RGGRKPWHNNGRPVCQICGIPGHVAEICYYRFDKEFVPKS 248
Query: 301 PGSFSPNFNQFNR-PPSYPQMEAMVTSPDLNQDTNWYPDSGATNHLTHSFNNLSIGTEYG 360
G + QFNR PSYP T + + WYPDSGA++H+T+ NLS+ +EY
Sbjct: 249 SGVSRTSQQQFNRSSPSYPPSAFASTKSESASEEWWYPDSGASHHVTNDLGNLSVSSEYT 308
Query: 361 GGNQVHVGNGAGLPILNFSFTSFSSHVCSNRIFRLNNLLHVSSITKNLISVSQFAKDNGV 420
GG++V VGNGAGL I N ++ + S+R F L NLLHV ITKNLISVS+FA DN V
Sbjct: 309 GGSKVQVGNGAGLSISNIGESNLNMFP-SSRPFLLKNLLHVPLITKNLISVSKFAYDNHV 368
Query: 421 YFEFHPTLCYVKDQVFGQVLLQGTLHDGLYRSHLYSSSLVEPQDKLPVQALTSQLFLSPS 480
YFEFHP+ C VKD VLL+GTLH+GLYR +L S +Q+ S + +
Sbjct: 369 YFEFHPSFCLVKDPATHVVLLRGTLHNGLYRFNLKSRISGPLHSPACLQSSVSPIKVPDQ 428
Query: 481 NVNCF---VFDLWHRRLGHSSLSTVKSVIQRFNPRLLINNKFQFCSACAMGKVHNLPFHN 540
+ C D WH RLGH S++TVK V+ N R+ N+ FCS+C +GK H LPF
Sbjct: 429 SPLCLPQNTLDKWHLRLGHPSIATVKQVLLDCNERISKNDNISFCSSCQLGKNHLLPFPQ 488
Query: 541 STTVYTAPLQLIIVTDLWGPTYIPSSQGYRYCISFIDAFSRYTW 579
STT ++AP + ++ +DLWGP +IPS G RY ISF+DA++RYTW
Sbjct: 489 STTNFSAPFE-VVYSDLWGPAHIPSRNGSRYYISFVDAYTRYTW 518
BLAST of Lag0041193 vs. NCBI nr
Match:
KAF7832320.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Senna tora])
HSP 1 Score: 374.4 bits (960), Expect = 1.8e-99
Identity = 242/600 (40.33%), Postives = 333/600 (55.50%), Query Frame = 0
Query: 31 VKLTDDNFLLWKFQILMALEGS----------------SSAEPVRQETLNPAYTLWKKQD 90
+KL + N+LLW+ QI+ A++G S E E L+ Y WKKQD
Sbjct: 32 IKLDEKNYLLWRLQIMAAIQGHDLEQYIAGKSSIPAKFDSNEDRLAEKLSDKYVAWKKQD 91
Query: 91 RMISSWLVGSMSEEILHQMIHCTSSKEIWVSLKQIFTTRNLAQMMKIKTKLQTIQKGGMS 150
+++ SWL+ SM+E ++ ++I CT S E+W ++Q F T A++ + +T+L+ I+KG S
Sbjct: 92 QLVLSWLISSMTESMITRVIGCTHSYEVWDRVQQFFGTNTRAKVHQFRTELRNIKKGNRS 151
Query: 151 LKEYFSKIQQYIDALAVVG-KPVEVEDHILFILAGLGSEYESMVFVISAKIGPQTVQEVM 210
+ EY KI+ DAL +G V +H+ +L GL EYES V I + P TV E+
Sbjct: 152 MTEYLLKIKSITDALIAIGSSEVSDHEHVQCVLEGLPQEYESFVTGIHMRTEPCTVYELE 211
Query: 211 SLLLTQENRIESKIASTESSLPSANL-------MVHSKPPESDLQKSNTNHFSPNPGSG- 270
LL+ QE R+E + +T + PSAN+ S P + +S+ F+ G G
Sbjct: 212 PLLIAQEIRVEKNLKATITETPSANVANTDSKDKNSSAKPNNYQNQSSNRQFNNQRGGGR 271
Query: 271 -----NRGRGGG--RGGFNTNRGGRSWNNRNRP--QCQVCGKFNHTAPKCFFRYAPFGSS 330
RGRG G RGG++ RGG S NN NRP CQVC K H A C+ R+
Sbjct: 272 QSFGQGRGRGNGSPRGGYSP-RGGYS-NNSNRPYVMCQVCSKPGHIASACYHRF-DSAYH 331
Query: 331 NTPGSFSPNFNQFNRPPSYPQMEAMVTSPDLNQDTNWYPDSGATNHLTHSFNNLSIGTEY 390
+ +S +F QF + S P M A + +P++ D+ W+PDSGATNH+T NNL G+EY
Sbjct: 332 LSEQQYSQHFGQFRQRTS-PNMSAFIATPEVVTDSAWFPDSGATNHVTSDANNLMTGSEY 391
Query: 391 GGGNQVHVGNGAGLPILNFSFTSFSSHVCSNRIFRLNNLLHVSSITKNLISVSQFAKDNG 450
G Q+H+GNG GL I + + S N LN+LLHV +ITKNLISVS+FAKDN
Sbjct: 392 TGPEQLHMGNGTGLLISSVGQSLVKSSK-PNLHLTLNHLLHVPNITKNLISVSKFAKDNC 451
Query: 451 VYFEFHPTLCYVKDQVFGQVLLQGTL-HDGLYR---------SHLYSSSLVEPQDKLPVQ 510
V+FEFH C VK QV QVLL+GT+ DGLY+ S+ Y SS P P
Sbjct: 452 VFFEFHSNYCVVKCQVTKQVLLKGTVRQDGLYQFDEFQLCHLSNPYLSSTSSPSSSPPCA 511
Query: 511 ALTSQLFLSPSNVNCFVFDL--------WHRRLGHSSLSTVKSVIQRFNPRLLINNKFQF 570
+ S S S + FVF++ WH RLGH++ + V +V++ N + + +F
Sbjct: 512 FVNSASSSSVSVPSTFVFNVTASNLYSTWHYRLGHANSAVVNNVLKLCNVSISNKSTIEF 571
Query: 571 CSACAMGKVHNLPFHNSTTVYTAPLQLIIVTDLWGPTYIPSSQGYRYCISFIDAFSRYTW 579
C AC GK H LP S ++YT PL+L + TDLWGP I S GY Y ISF+DAFSRY W
Sbjct: 572 CDACCRGKHHKLPSPPSQSIYTRPLEL-VYTDLWGPAPISSCNGYLYYISFVDAFSRYVW 625
BLAST of Lag0041193 vs. ExPASy Swiss-Prot
Match:
Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)
HSP 1 Score: 249.6 bits (636), Expect = 8.7e-65
Identity = 185/581 (31.84%), Postives = 294/581 (50.60%), Query Frame = 0
Query: 26 NKISIVKLTDDNFLLWK---------FQILMALEGSSSAEPVRQET-----LNPAYTLWK 85
N ++ KLT N+L+W +++ L+GS++ P T +NP YT WK
Sbjct: 19 NMSNVTKLTSTNYLMWSRQVHALFDGYELAGFLDGSTTMPPATIGTDAAPRVNPDYTRWK 78
Query: 86 KQDRMISSWLVGSMSEEILHQMIHCTSSKEIWVSLKQIFTTRNLAQMMKIKTKLQTIQKG 145
+QD++I S ++G++S + + T++ +IW +L++I+ + + +++T+L+ KG
Sbjct: 79 RQDKLIYSAVLGAISMSVQPAVSRATTAAQIWETLRKIYANPSYGHVTQLRTQLKQWTKG 138
Query: 146 GMSLKEYFSKIQQYIDALAVVGKPVEVEDHILFILAGLGSEYESMVFVISAKIGPQTVQE 205
++ +Y + D LA++GKP++ ++ + +L L EY+ ++ I+AK P T+ E
Sbjct: 139 TKTIDDYMQGLVTRFDQLALLGKPMDHDEQVERVLENLPEEYKPVIDQIAAKDTPPTLTE 198
Query: 206 VMSLLLTQENRIESKIASTESSLPSANLMVHSKPPESDLQKSNTNHFSPNPGSGNRGRGG 265
+ LL E++I + ++T + +AN + H + +N N+ + N NR
Sbjct: 199 IHERLLNHESKILAVSSATVIPI-TANAVSH----RNTTTTNNNNNGNRNNRYDNR---- 258
Query: 266 GRGGFNTNRGGRSW----------NNRNRP---QCQVCGKFNHTAPKCFFRYAPFGSSNT 325
N N + W NN+++P +CQ+CG H+A +C S N+
Sbjct: 259 -----NNNNNSKPWQQSSTNFHPNNNQSKPYLGKCQICGVQGHSAKRCSQLQHFLSSVNS 318
Query: 326 PGSFSPNFNQFNRPPSYPQMEAMVTSPDLNQDTNWYPDSGATNHLTHSFNNLSIGTEYGG 385
SP P P+ + SP NW DSGAT+H+T FNNLS+ Y G
Sbjct: 319 QQPPSP------FTPWQPRANLALGSP--YSSNNWLLDSGATHHITSDFNNLSLHQPYTG 378
Query: 386 GNQVHVGNGAGLPILNFSFTSFSSHVCSNRIFRLNNLLHVSSITKNLISVSQFAKDNGVY 445
G+ V V +G+ +PI + TS S+ +R L+N+L+V +I KNLISV + NGV
Sbjct: 379 GDDVMVADGSTIPISHTGSTSLST---KSRPLNLHNILYVPNIHKNLISVYRLCNANGVS 438
Query: 446 FEFHPTLCYVKDQVFGQVLLQGTLHDGLYRSHLYSSSLVEPQDKLPVQALTSQLFLSPSN 505
EF P VKD G LLQG D LY + SS V LF SPS+
Sbjct: 439 VEFFPASFQVKDLNTGVPLLQGKTKDELYEWPIASSQPV-------------SLFASPSS 498
Query: 506 VNCFVFDLWHRRLGHSSLSTVKSVIQRFNPRLL-INNKFQFCSACAMGKVHNLPFHNSTT 565
WH RLGH + S + SVI ++ +L ++KF CS C + K + +PF ST
Sbjct: 499 K--ATHSSWHARLGHPAPSILNSVISNYSLSVLNPSHKFLSCSDCLINKSNKVPFSQSTI 557
Query: 566 VYTAPLQLIIVTDLWGPTYIPSSQGYRYCISFIDAFSRYTW 579
T PL+ I +D+W + I S YRY + F+D F+RYTW
Sbjct: 559 NSTRPLE-YIYSDVWS-SPILSHDNYRYYVIFVDHFTRYTW 557
BLAST of Lag0041193 vs. ExPASy Swiss-Prot
Match:
Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)
HSP 1 Score: 222.2 bits (565), Expect = 1.5e-56
Identity = 179/575 (31.13%), Postives = 283/575 (49.22%), Query Frame = 0
Query: 26 NKISIVKLTDDNFLLWK---------FQILMALEGSSSAEPVRQET-----LNPAYTLWK 85
N ++ KLT N+L+W +++ L+GS+ P T +NP YT W+
Sbjct: 19 NMSNVTKLTSTNYLMWSRQVHALFDGYELAGFLDGSTPMPPATIGTDAVPRVNPDYTRWR 78
Query: 86 KQDRMISSWLVGSMSEEILHQMIHCTSSKEIWVSLKQIFTTRNLAQMMKIKTKLQTIQKG 145
+QD++I S ++G++S + + T++ +IW +L++I+ + + T+L+ I +
Sbjct: 79 RQDKLIYSAILGAISMSVQPAVSRATTAAQIWETLRKIYANPSYGHV----TQLRFITR- 138
Query: 146 GMSLKEYFSKIQQYIDALAVVGKPVEVEDHILFILAGLGSEYESMVFVISAKIGPQTVQE 205
D LA++GKP++ ++ + +L L +Y+ ++ I+AK P ++ E
Sbjct: 139 --------------FDQLALLGKPMDHDEQVERVLENLPDDYKPVIDQIAAKDTPPSLTE 198
Query: 206 VMSLLLTQENRIESKIASTESSLPSANLMVHSKPPESDLQKSNTNHFSPNPGSGNRGRGG 265
+ L+ +E+++ + + S E +AN++ H + +NTN N G NR
Sbjct: 199 IHERLINRESKLLA-LNSAEVVPITANVVTH--------RNTNTNRNQNNRGD-NRNYNN 258
Query: 266 GRGGFN----TNRGGRSWNNRNRP---QCQVCGKFNHTAPKCFFRYAPFGSSNTPGSFSP 325
N ++ G RS N + +P +CQ+C H+A +C + ++N S SP
Sbjct: 259 NNNRSNSWQPSSSGSRSDNRQPKPYLGRCQICSVQGHSAKRCPQLHQFQSTTNQQQSTSP 318
Query: 326 NFNQFNRPPSYPQMEAMVTSPDLNQDTNWYPDSGATNHLTHSFNNLSIGTEYGGGNQVHV 385
P P+ V SP NW DSGAT+H+T FNNLS Y GG+ V +
Sbjct: 319 ------FTPWQPRANLAVNSP--YNANNWLLDSGATHHITSDFNNLSFHQPYTGGDDVMI 378
Query: 386 GNGAGLPILNFSFTSFSSHVCSNRIFRLNNLLHVSSITKNLISVSQFAKDNGVYFEFHPT 445
+G+ +PI + T +S S+R LN +L+V +I KNLISV + N V EF P
Sbjct: 379 ADGSTIPI---THTGSASLPTSSRSLDLNKVLYVPNIHKNLISVYRLCNTNRVSVEFFPA 438
Query: 446 LCYVKDQVFGQVLLQGTLHDGLYRSHLYSSSLVEPQDKLPVQALTSQLFLSPSNVNCFVF 505
VKD G LLQG D LY + SS V +F SP +
Sbjct: 439 SFQVKDLNTGVPLLQGKTKDELYEWPIASSQAV-------------SMFASPCSK--ATH 498
Query: 506 DLWHRRLGHSSLSTVKSVIQRFN-PRLLINNKFQFCSACAMGKVHNLPFHNSTTVYTAPL 565
WH RLGH SL+ + SVI + P L ++K CS C + K H +PF NST + PL
Sbjct: 499 SSWHSRLGHPSLAILNSVISNHSLPVLNPSHKLLSCSDCFINKSHKVPFSNSTITSSKPL 536
Query: 566 QLIIVTDLWGPTYIPSSQGYRYCISFIDAFSRYTW 579
+ I +D+W + I S YRY + F+D F+RYTW
Sbjct: 559 E-YIYSDVWS-SPILSIDNYRYYVIFVDHFTRYTW 536
BLAST of Lag0041193 vs. ExPASy Swiss-Prot
Match:
P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)
HSP 1 Score: 82.8 bits (203), Expect = 1.4e-14
Identity = 124/571 (21.72%), Postives = 215/571 (37.65%), Query Frame = 0
Query: 25 GNKISIVKLTDDN-FLLWK-----FQILMALEGSSSAEPVRQETLNPAYTLWKKQDRMIS 84
G K + K DN F W+ I L + + +T+ W D +
Sbjct: 3 GVKYEVAKFNGDNGFSTWQRRMRDLLIQQGLHKVLDVDSKKPDTMKAED--WADLDERAA 62
Query: 85 SWLVGSMSEEILHQMIHCTSSKEIWVSLKQIFTTRNLAQMMKIKTKLQTIQKG-GMSLKE 144
S + +S+++++ +I +++ IW L+ ++ ++ L + +K +L + G +
Sbjct: 63 SAIRLHLSDDVVNNIIDEDTARGIWTRLESLYMSKTLTNKLYLKKQLYALHMSEGTNFLS 122
Query: 145 YFSKIQQYIDALAVVGKPVEVEDHILFILAGLGSEYESMVFVISAKIGPQTVQEVMSLLL 204
+ + I LA +G +E ED + +L L S Y+++ I +++V S LL
Sbjct: 123 HLNVFNGLITQLANLGVKIEEEDKAILLLNSLPSSYDNLATTILHGKTTIELKDVTSALL 182
Query: 205 TQENRIESKIASTESSLPSANLMVHSKPPESDLQKSNTNHFSPNPGSGNRGRGGGRGGFN 264
E K PE+ Q T RGR R N
Sbjct: 183 LNEKM--------------------RKKPENQGQALITE---------GRGRSYQRSSNN 242
Query: 265 TNRGGRSWNNRNRPQCQVCGKFNHTAPKCFFRYAPFGSSNTPGSFSPNFNQFNRPPSYPQ 324
R G ++NR + +V +N P F R P G S N N
Sbjct: 243 YGRSGARGKSKNRSKSRVRNCYNCNQPGHFKRDCP-NPRKGKGETSGQKNDDNTAAMVQN 302
Query: 325 MEAMVTSPDLNQ--------DTNWYPDSGATNHLTHSFNNLSIGTEYGGGNQVHVGNGAG 384
+ +V + + ++ W D+ A++H T +L G V +GN +
Sbjct: 303 NDNVVLFINEEEECMHLSGPESEWVVDTAASHHAT-PVRDLFCRYVAGDFGTVKMGNTSY 362
Query: 385 LPILNFSFTSFSSHVCSNRIFRLNNLLHVSSITKNLISVSQFAKDNGVYFEFHPTLCYVK 444
I ++V + L ++ HV + NLIS +D + + K
Sbjct: 363 SKIAGIGDICIKTNVGCTLV--LKDVRHVPDLRMNLISGIALDRDGYESYFANQKWRLTK 422
Query: 445 DQVFGQVLLQGTLHDGLYRSH--LYSSSLVEPQDKLPVQALTSQLFLSPSNVNCFVFDLW 504
+ V+ +G LYR++ + L QD++ V DLW
Sbjct: 423 GSL---VIAKGVARGTLYRTNAEICQGELNAAQDEISV-------------------DLW 482
Query: 505 HRRLGHSSLSTVKSVIQRFNPRLLINNKFQFCSACAMGKVHNLPFHNSTTVYTAPLQLII 564
H+R+GH S ++ + ++ + C C GK H + F S+ L L +
Sbjct: 483 HKRMGHMSEKGLQILAKKSLISYAKGTTVKPCDYCLFGKQHRVSFQTSSERKLNILDL-V 515
Query: 565 VTDLWGPTYIPSSQGYRYCISFIDAFSRYTW 579
+D+ GP I S G +Y ++FID SR W
Sbjct: 543 YSDVCGPMEIESMGGNKYFVTFIDDASRKLW 515
BLAST of Lag0041193 vs. ExPASy TrEMBL
Match:
A0A5A7U233 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold264G00060 PE=4 SV=1)
HSP 1 Score: 559.3 bits (1440), Expect = 1.9e-155
Identity = 323/605 (53.39%), Postives = 407/605 (67.27%), Query Frame = 0
Query: 2 STESSTSASMEETANPSSQTFSPGNKISIVKLTDDNFLLWKFQILMALEG-------SSS 61
ST S E ++P +Q F GNKIS+VKL DD FLLWKFQIL ALE S
Sbjct: 3 STSSLLGVENTEASSPINQIFGSGNKISLVKLNDDTFLLWKFQILTALEAYDLENFLESE 62
Query: 62 AEPVRQ-------------ETLNPAYTLWKKQDRMISSWLVGSMSEEILHQMIHCTSSKE 121
+EP + T NPAY +WK+QDR+ISSWL+GSMSEEIL+QM+HC S+KE
Sbjct: 63 SEPPSKYLISTESSSASATGTPNPAYKVWKRQDRLISSWLLGSMSEEILNQMLHCKSAKE 122
Query: 122 IWVSLKQIFTTRNLAQMMKIKTKLQTIQKGGMSLKEYFSKIQQYIDALAVVGKPVEVEDH 181
IW +L+ IF++R LAQ M+ K KL I+KG M LKEYF KI Q +DALA + KPV +DH
Sbjct: 123 IWETLQGIFSSRYLAQAMQFKNKLHNIKKGSMPLKEYFLKILQCVDALASINKPVSSDDH 182
Query: 182 ILFILAGLGSEYESMVFVISAKIGPQTVQEVMSLLLTQENRIESKIASTESSLPSANLMV 241
IL+ILAGLGS+Y+SM+ VISA+ +VQEVMSLLLTQE++ ESK+ S E++LPS N++
Sbjct: 183 ILYILAGLGSDYQSMISVISARTDSPSVQEVMSLLLTQESQNESKLIS-ETALPSVNIVT 242
Query: 242 HS--KPPESDLQKSNTNHFSPNPGSGNRGRGGGRGGFNTNRGGRSWNNRNRPQCQVCGKF 301
+ K ES + ++N N++ N R GGRG +NRG R NRN+PQCQ+C K
Sbjct: 243 QTTEKGAESYI-RTNQNNYHNNHSYNQR---GGRGNGRSNRGRR--GNRNKPQCQICAKL 302
Query: 302 NHTAPKCFFRYAPFGSSN--TPGSFSPNFNQFNRPPSYPQMEAMVTSPDLNQDTNWYPDS 361
++A +CFFRY P +S+ +P S + ++ N ++PQM AMV + DLN D+NWYPDS
Sbjct: 303 GYSADRCFFRYTPRSNSSGYSPNSHNTSYTNMN---NHPQMSAMVAALDLNIDSNWYPDS 362
Query: 362 GATNHLTHSFNNLSIGTEYGGGNQVHVGNGAGLPILNFSFTSFSSHVCSNRIFRLNNLLH 421
GATNHLTHS +NLSIG+EYGGGNQ++ NG+GLPI ++ SF+S + F LNNLL
Sbjct: 363 GATNHLTHSLSNLSIGSEYGGGNQIYAANGSGLPITHYGSMSFNSSTLPFKSFTLNNLLQ 422
Query: 422 VSSITKNLISVSQFAKDNGVYFEFHPTLCYVKDQVFGQVLLQGTLHDGLYRSHLYSSSLV 481
V SITKNLISVSQFAKDN V+FEFHPTLCYVKD GQVLLQG L+DGLY+ +
Sbjct: 423 VPSITKNLISVSQFAKDNHVFFEFHPTLCYVKDLDTGQVLLQGLLNDGLYK------FTI 482
Query: 482 EPQDKL--PVQALTSQLF--LSPSNVNCFVFDLWHRRLGHSSLSTVKSVIQRFNPRLLIN 541
EP K + T +F + P + N + DLWHRRLGH L VK+V+ +
Sbjct: 483 EPSHKRLHHSNSNTKPVFNTVVPKS-NTPLLDLWHRRLGHPHLPIVKAVLNHIDNSSGTI 542
Query: 542 NKFQFCSACAMGKVHNLPFHNSTTVYTAPLQLIIVTDLWGPTYIPSSQGYRYCISFIDAF 579
NK FC ACA+GK H LPF +S T+YT PLQL I DLWGP S G+RY ISF+DA+
Sbjct: 543 NKLNFCEACALGKHHALPFSHSLTLYTHPLQL-ITCDLWGPAVNVSHNGFRYYISFVDAY 589
BLAST of Lag0041193 vs. ExPASy TrEMBL
Match:
A0A5D3CH97 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold25G00040 PE=4 SV=1)
HSP 1 Score: 559.3 bits (1440), Expect = 1.9e-155
Identity = 323/605 (53.39%), Postives = 407/605 (67.27%), Query Frame = 0
Query: 2 STESSTSASMEETANPSSQTFSPGNKISIVKLTDDNFLLWKFQILMALEG-------SSS 61
ST S E ++P +Q F GNKIS+VKL DD FLLWKFQIL ALE S
Sbjct: 3 STSSLLGVENTEASSPINQIFGSGNKISLVKLNDDTFLLWKFQILTALEAYDLENFLESE 62
Query: 62 AEPVRQ-------------ETLNPAYTLWKKQDRMISSWLVGSMSEEILHQMIHCTSSKE 121
+EP + T NPAY +WK+QDR+ISSWL+GSMSEEIL+QM+HC S+KE
Sbjct: 63 SEPPSKYLISTESSSASATGTPNPAYKVWKRQDRLISSWLLGSMSEEILNQMLHCKSAKE 122
Query: 122 IWVSLKQIFTTRNLAQMMKIKTKLQTIQKGGMSLKEYFSKIQQYIDALAVVGKPVEVEDH 181
IW +L+ IF++R LAQ M+ K KL I+KG M LKEYF KI Q +DALA + KPV +DH
Sbjct: 123 IWETLQGIFSSRYLAQAMQFKNKLHNIKKGSMPLKEYFLKILQCVDALASINKPVSSDDH 182
Query: 182 ILFILAGLGSEYESMVFVISAKIGPQTVQEVMSLLLTQENRIESKIASTESSLPSANLMV 241
IL+ILAGLGS+Y+SM+ VISA+ +VQEVMSLLLTQE++ ESK+ S E++LPS N++
Sbjct: 183 ILYILAGLGSDYQSMISVISARTDSPSVQEVMSLLLTQESQNESKLIS-ETALPSVNIVT 242
Query: 242 HS--KPPESDLQKSNTNHFSPNPGSGNRGRGGGRGGFNTNRGGRSWNNRNRPQCQVCGKF 301
+ K ES + ++N N++ N R GGRG +NRG R NRN+PQCQ+C K
Sbjct: 243 QTTEKGAESYI-RTNQNNYHNNHSYNQR---GGRGNGRSNRGRR--GNRNKPQCQICAKL 302
Query: 302 NHTAPKCFFRYAPFGSSN--TPGSFSPNFNQFNRPPSYPQMEAMVTSPDLNQDTNWYPDS 361
++A +CFFRY P +S+ +P S + ++ N ++PQM AMV + DLN D+NWYPDS
Sbjct: 303 GYSADRCFFRYTPRSNSSGYSPNSHNTSYTNMN---NHPQMSAMVAALDLNIDSNWYPDS 362
Query: 362 GATNHLTHSFNNLSIGTEYGGGNQVHVGNGAGLPILNFSFTSFSSHVCSNRIFRLNNLLH 421
GATNHLTHS +NLSIG+EYGGGNQ++ NG+GLPI ++ SF+S + F LNNLL
Sbjct: 363 GATNHLTHSLSNLSIGSEYGGGNQIYAANGSGLPITHYGSMSFNSSTLPFKSFTLNNLLQ 422
Query: 422 VSSITKNLISVSQFAKDNGVYFEFHPTLCYVKDQVFGQVLLQGTLHDGLYRSHLYSSSLV 481
V SITKNLISVSQFAKDN V+FEFHPTLCYVKD GQVLLQG L+DGLY+ +
Sbjct: 423 VPSITKNLISVSQFAKDNHVFFEFHPTLCYVKDLDTGQVLLQGLLNDGLYK------FTI 482
Query: 482 EPQDKL--PVQALTSQLF--LSPSNVNCFVFDLWHRRLGHSSLSTVKSVIQRFNPRLLIN 541
EP K + T +F + P + N + DLWHRRLGH L VK+V+ +
Sbjct: 483 EPSHKRLHHSNSNTKPVFNTVVPKS-NTPLLDLWHRRLGHPHLPIVKAVLNHIDNSSGTI 542
Query: 542 NKFQFCSACAMGKVHNLPFHNSTTVYTAPLQLIIVTDLWGPTYIPSSQGYRYCISFIDAF 579
NK FC ACA+GK H LPF +S T+YT PLQL I DLWGP S G+RY ISF+DA+
Sbjct: 543 NKLNFCEACALGKHHALPFSHSLTLYTHPLQL-ITCDLWGPAVNVSHNGFRYYISFVDAY 589
BLAST of Lag0041193 vs. ExPASy TrEMBL
Match:
A0A438FJP6 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX=29760 GN=POLX_1134 PE=4 SV=1)
HSP 1 Score: 397.1 bits (1019), Expect = 1.2e-106
Identity = 241/615 (39.19%), Postives = 351/615 (57.07%), Query Frame = 0
Query: 23 SPGNKISIVKLTDDNFLLWKFQILMALEG--------SSSAEPVRQET-------LNPAY 82
SP +++ ++L DDNFL+WK+QI A+ G + P + T NP +
Sbjct: 144 SPLSQLITMRLEDDNFLMWKYQIENAVRGYGLEGFLFGTEQVPPKMVTDKIGVLVPNPKF 203
Query: 83 TLWKKQDRMISSWLVGSMSEEILHQMIHCTSSKEIWVSLKQIFTTRNLAQMMKIKTKLQT 142
+++QD ++ SWL+ S+ L Q++ C+S+ E+W ++ Q F +++ A++M K+++Q
Sbjct: 204 RDYQRQDHLLISWLLSSIGSAFLPQVVGCSSAFEVWNTISQNFNSQSSAKVMFYKSQMQM 263
Query: 143 IQKGGMSLKEYFSKIQQYIDALAVVGKPVEVEDHILFILAGLGSEYESMVFVISAKIGPQ 202
++K G+++++Y +K++ Y D LA G + DHIL I+ GLG EYES++ VIS+K
Sbjct: 264 LKKDGLTMRDYLTKMKNYCDLLATAGHKISDTDHILAIMQGLGDEYESVIAVISSKKSSP 323
Query: 203 TVQEVMSLLLTQENRIESKIASTESSLPSANLMVHSKPPESDLQKSNTNHFSPNPGSGNR 262
++Q V S L+ E RI KI+S + S+ + + P S N+N + P+ G NR
Sbjct: 324 SLQYVTSTLIAHEGRIAHKISSNDLSVNYTSQYSNRGPSSS----WNSNGY-PSSGFQNR 383
Query: 263 GRGGG----RGGFNTNRG---GRSWNNRNRPQCQVCGKFNHTAPKCFFRYAPFGSSNTP- 322
+ GG RG F NRG GR+ +PQCQ+C KF HT +CF+RY P N P
Sbjct: 384 NQFGGNQVTRGSFVHNRGRGRGRA-QGGIKPQCQLCNKFGHTVHRCFYRYDPNFHGNMPA 443
Query: 323 -----------------GSFSP----NFNQFNRPPS--YPQMEAMVTSPDLNQDTNWYPD 382
GS S N +++ + Y +MEAMV +P+ Q+ W+PD
Sbjct: 444 NGPTPGVLGSGARNGASGSISSAGNVNLTEYDAQENQDYSEMEAMVATPEDLQNCCWFPD 503
Query: 383 SGATNHLTHSFNNLSIGTEYGGGNQVHVGNGAGLPILNFSFTSFSSHVCSNRIFRLNNLL 442
SGATNH+TH NL+ G EY G +++H+GNG GL I + + F S N++ L N+L
Sbjct: 504 SGATNHVTHDLGNLNSGAEYNGNSKIHMGNGTGLKISHIGLSVFPSSSSPNKVLFLKNIL 563
Query: 443 HVSSITKNLISVSQFAKDNGVYFEFHPTLCYVKDQVFGQVLLQGTLHDGLYRSHL----- 502
V +I KNL+SVSQFA+DN VYFEFHP +C+VKD+ +LLQG LH GLY+ +L
Sbjct: 564 RVPAIKKNLLSVSQFARDNNVYFEFHPKVCFVKDKSNHSLLLQGNLHKGLYQFNLSKKLF 623
Query: 503 -YSSSLVEPQDKLPVQALTSQL-------FLSPSNVNCFVFDLWHRRLGHSSLSTVKSVI 562
+S L DK + + L F +N + VFDLWH+RLGH + V V+
Sbjct: 624 GKASGLSLSNDKNELTCCNASLVHNDNSDFPEKTNSSFHVFDLWHKRLGHPASKIVTQVL 683
Query: 563 QRFNPRLLINNKFQFCSACAMGKVHNLPFHNSTTVYTAPLQLIIVTDLWGPTYIPSSQGY 579
+ CSAC +GK HNLPF S TVYT PLQL +V+DLWGP I SS G+
Sbjct: 684 NDNKIPFSTKSGSSICSACQLGKSHNLPFPISQTVYTKPLQL-VVSDLWGPAPINSSYGF 743
BLAST of Lag0041193 vs. ExPASy TrEMBL
Match:
A0A2Z7AWA7 (Integrase catalytic domain-containing protein OS=Dorcoceras hygrometricum OX=472368 GN=F511_06348 PE=4 SV=1)
HSP 1 Score: 396.7 bits (1018), Expect = 1.6e-106
Identity = 227/524 (43.32%), Postives = 318/524 (60.69%), Query Frame = 0
Query: 61 ETLNPAYTLWKKQDRMISSWLVGSMSEEILHQMIHCTSSKEIWVSLKQIFTTRNLAQMMK 120
E +NP + W +QD+++ S+L+ SMSE QMI C +S ++W + Q+F TR+ A++M+
Sbjct: 9 EVMNPNFVTWNRQDQLLFSFLLASMSESAQSQMIGCQTSSQLWTRVTQLFATRSKARVMQ 68
Query: 121 IKTKLQTIQKGGMSLKEYFSKIQQYIDALAVVGKPVEVEDHILFILAGLGSEYESMVFVI 180
K +LQT++KG +S+K+Y K++ YID LA G + +D IL IL G+G EYES+V +
Sbjct: 69 YKLQLQTLKKGNLSMKDYLGKMKGYIDILAACGNSIPEDDQILHILGGVGPEYESVVVHV 128
Query: 181 SAKIGPQTVQEVMSLLLTQENRIES-KIASTESSLPSANLMVHSKPPESDLQKSNTNHFS 240
++++ ++ EV +LLL E RIE+ I ++ PS N+ S + NT+
Sbjct: 129 TSRVESLSLSEVGALLLAHEGRIETYNITGGHTASPSVNVTT----APSQRKAENTSQSQ 188
Query: 241 PNPGSGNRGRGGGRGGFNTNRGGRS-WNNRNRPQCQVCGKFNHTAPKCFFRYAPFGSSNT 300
P RGRG GR G RGGR W+N RP CQ+CG H A C++R+ +
Sbjct: 189 P----VYRGRGRGRNG----RGGRKPWHNNGRPVCQICGIPGHVAEICYYRFDKEFVPKS 248
Query: 301 PGSFSPNFNQFNR-PPSYPQMEAMVTSPDLNQDTNWYPDSGATNHLTHSFNNLSIGTEYG 360
G + QFNR PSYP T + + WYPDSGA++H+T+ NLS+ +EY
Sbjct: 249 SGVSRTSQQQFNRSSPSYPPSAFASTKSESASEEWWYPDSGASHHVTNDLGNLSVSSEYT 308
Query: 361 GGNQVHVGNGAGLPILNFSFTSFSSHVCSNRIFRLNNLLHVSSITKNLISVSQFAKDNGV 420
GG++V VGNGAGL I N ++ + S+R F L NLLHV ITKNLISVS+FA DN V
Sbjct: 309 GGSKVQVGNGAGLSISNIGESNLNMFP-SSRPFLLKNLLHVPLITKNLISVSKFAYDNHV 368
Query: 421 YFEFHPTLCYVKDQVFGQVLLQGTLHDGLYRSHLYSSSLVEPQDKLPVQALTSQLFLSPS 480
YFEFHP+ C VKD VLL+GTLH+GLYR +L S +Q+ S + +
Sbjct: 369 YFEFHPSFCLVKDPATHVVLLRGTLHNGLYRFNLKSRISGPLHSPACLQSSVSPIKVPDQ 428
Query: 481 NVNCF---VFDLWHRRLGHSSLSTVKSVIQRFNPRLLINNKFQFCSACAMGKVHNLPFHN 540
+ C D WH RLGH S++TVK V+ N R+ N+ FCS+C +GK H LPF
Sbjct: 429 SPLCLPQNTLDKWHLRLGHPSIATVKQVLLDCNERISKNDNISFCSSCQLGKNHLLPFPQ 488
Query: 541 STTVYTAPLQLIIVTDLWGPTYIPSSQGYRYCISFIDAFSRYTW 579
STT ++AP + ++ +DLWGP +IPS G RY ISF+DA++RYTW
Sbjct: 489 STTNFSAPFE-VVYSDLWGPAHIPSRNGSRYYISFVDAYTRYTW 518
BLAST of Lag0041193 vs. ExPASy TrEMBL
Match:
A0A438H844 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Vitis vinifera OX=29760 GN=RE1_3152 PE=4 SV=1)
HSP 1 Score: 369.8 bits (948), Expect = 2.1e-98
Identity = 238/611 (38.95%), Postives = 344/611 (56.30%), Query Frame = 0
Query: 11 MEETANPSSQTFSPGNKISIV--KLTDDNFLLWKFQILMALEGSS--------------- 70
MEET+ +S F P + V KL + NFL+W+ QIL L G
Sbjct: 1 MEETSRTTS--FLPVSFPHPVSSKLDNHNFLVWRKQILTTLRGHKLQHFLSETSVLPSEF 60
Query: 71 -SAEPVRQETLNPAYTLWKKQDRMISSWLVGSMSEEILHQMIHCTSSKEIWVSLKQIFTT 130
S++ Q +NP + W++QD++I SWL+ S+++ +L +M++C +S ++W +L+ F T
Sbjct: 61 LSSDDETQNHVNPKFQDWEQQDQLIMSWLLASITDALLTRMVNCDTSAQVWKTLELYFAT 120
Query: 131 RNLAQMMKIKTKLQTIQKGGMSLKEYFSKIQQYIDALAVVGKPVEVEDHILFILAGLGSE 190
+ A++ + KT+L +KG +S+ +Y KI+ +D LA+VG + V+DHI I GL +
Sbjct: 121 QVRAKVTQFKTQLHNTKKGDLSISDYLLKIRNVVDLLALVGHKISVKDHIDAIFEGLPQD 180
Query: 191 YESMVFVISAKIGPQTVQEVMSLLLTQENRIESKIASTESSLPS-ANLMVHSK--PPESD 250
YE+ + +++++ P TV+E+ LLL QE+RIE I + S PS A+L+ ++ P +
Sbjct: 181 YETFIISVNSRLDPYTVEEIEVLLLAQESRIEKNIKIADLSTPSLAHLITTNRNGSPHFN 240
Query: 251 LQKSNTN-HFSPNPGSGNRGRGGGRGGFNTNRGGR----SWNNRNRPQCQVCGKFNHTAP 310
+ S N +F P SGN G RG F GR SW N+PQCQ+CG+ H
Sbjct: 241 YRASTRNSNFRPPTHSGN-GMQHFRGNFTQQGRGRHGRGSWKGNNKPQCQLCGRIGHVVM 300
Query: 311 KCFFRYAPFGSSNTPGSFSPNFNQFNRPPSYPQM---------EAMVTSPDLNQDTNWYP 370
+C++R+ S P N Q N + Q+ T+ ++ QD NWYP
Sbjct: 301 QCYYRFDQ--SFTGPSQLQGNRPQGNMAHLHQQLSENFFPGTSSVKPTTAEIIQDNNWYP 360
Query: 371 DSGATNHLTHSFNNLSIGTEYGGGNQVHVGNGAGLPILNFSFTSFSSHVCSNRIFRLNNL 430
DSGAT+HLT + NNL +++ ++V VGNG GLPI + TSFSS ++ L L
Sbjct: 361 DSGATHHLTPNLNNLLTKSQFPSSDEVFVGNGKGLPIHHIGHTSFSSSFIPSKTLALKQL 420
Query: 431 LHVSSITKNLISVSQFAKDNGVYFEFHPTLCYVKDQVFGQVLLQGTLHDGLYRSHLYSSS 490
LHV ITKNL+SVS+FA DN V+FEFHPT C+VKD VL+ G L GLY ++ ++
Sbjct: 421 LHVPEITKNLLSVSKFAADNHVFFEFHPTSCFVKDLSTRTVLMHGQLKGGLY---VFDNT 480
Query: 491 LVEPQDKLPVQ--------ALTSQLFLSPSNVNCFVFDLWHRRLGHSSLSTVKSVIQRFN 550
Q KLP+ AL S+ P++ + F LWH RLGH S V V+ + N
Sbjct: 481 ----QLKLPLHNSSCFASTALPSKEPTVPAS-STSPFTLWHNRLGHPSSHIVSLVLNKCN 540
Query: 551 PRLLINNKFQFCSACAMGKVHNLPFHNSTTVYTAPLQLIIVTDLWGPTYIPSSQGYRYCI 579
L CSAC MGK+H PF +S + YT PL+L I TDLWGP PSS G++Y I
Sbjct: 541 LPHLNKIPSLICSACCMGKIHKSPFLHSKSSYTKPLEL-IHTDLWGPISTPSSHGHQYYI 597
BLAST of Lag0041193 vs. TAIR 10
Match:
AT5G48050.1 (CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G34070.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )
HSP 1 Score: 78.6 bits (192), Expect = 1.9e-14
Identity = 67/270 (24.81%), Postives = 135/270 (50.00%), Query Frame = 0
Query: 39 LLWKFQILMALEGSSSAEPVRQETLNPAYTLWKKQDRMISSWLVGSMSEEILHQMIH--C 98
L F +L ++GSS+ P+ ++ WK++D ++ W+ G++++ +L +I C
Sbjct: 43 LCLSFGVLGHIDGSSTPTPMTEKR-------WKERDGLVKMWIYGTITDSLLDTIIKVGC 102
Query: 99 TSSKEIWVSLKQIFTTRNLAQMMKIKTKLQTIQKGGMSLKEYFSKIQQYIDALAVVGKPV 158
T ++++W+SL+ +F A+ ++ + +L+T +S+ EY K++ D L V P+
Sbjct: 103 T-ARDLWLSLENLFRDNKEARALQFENELRTTTIDDLSVHEYCQKLKSLSDLLTNVDSPI 162
Query: 159 EVEDHILFILAGLGSEYESMVFVISAKIGPQTVQEVMSLLLTQENRI--ESKIASTESSL 218
++ +L GL +Y+ ++ VI K + E S+LL +E+R+ +SK + + ++
Sbjct: 163 SDRVLVMHLLNGLTEKYDYILNVIKHKSPFPSFTEARSMLLMEESRLSNKSKSSLSHTNH 222
Query: 219 PSANLMVHSKPPESDLQKSNTNHFSPNPGSG-----NRGRGGGRGGFNTNRGGRSWNNRN 278
PS + ++ + P + + ++ + N G G NRG G G +N N R N
Sbjct: 223 PSLSNVLFTVPRQQERYPQEYHNNNSNMGRGRSKKKNRGGGSSDGRYNNNNNWR----LN 282
Query: 279 RPQCQVCG------KFNHTAPKCFFRYAPF 294
+P + G + H P+ F + F
Sbjct: 283 QPPTWIYGPPQSPYMYPHGGPQFFHKKTYF 300
BLAST of Lag0041193 vs. TAIR 10
Match:
AT1G21280.1 (CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); Has 707 Blast hits to 705 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 703; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 63.2 bits (152), Expect = 8.2e-10
Identity = 37/152 (24.34%), Postives = 83/152 (54.61%), Query Frame = 0
Query: 5 SSTSASMEETANPSSQTFSP-----GNKISIVKLT--DDNFLLWKFQILMALE-----GS 64
+ T S+ T++P S + P + SI KL+ +DN++ WK + L G
Sbjct: 2 AETIKSVSPTSDPDSPYYLPPDIHHPSDFSIQKLSKDEDNYVAWKIRFRSFLRVTKKFGF 61
Query: 65 SSAEPVRQETLNPAYTLWKKQDRMISSWLVGSMSEEILHQMIHCTSSKEIWVSLKQIFTT 124
+ + +P Y W++ + M+ WL+ SM++++L +++ ++ ++W L+++F
Sbjct: 62 IDGTLPKPDPFSPLYQPWEQCNAMVMYWLMNSMTDKLLESVMYAETAHKMWEDLRRVFVP 121
Query: 125 RNLAQMMKIKTKLQTIQKGGMSLKEYFSKIQQ 145
++ +++ +L T+++GG S++EYF K+ +
Sbjct: 122 CVDLKIYQLRRRLATLRQGGDSVEEYFGKLSK 153
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAA0048297.1 | 3.9e-155 | 53.39 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m... | [more] |
TYK10642.1 | 3.9e-155 | 53.39 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m... | [more] |
RVW60229.1 | 2.6e-106 | 39.19 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | [more] |
KZV26181.1 | 3.3e-106 | 43.32 | hypothetical protein F511_06348 [Dorcoceras hygrometricum] | [more] |
KAF7832320.1 | 1.8e-99 | 40.33 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Senna tora] | [more] |
Match Name | E-value | Identity | Description | |
Q94HW2 | 8.7e-65 | 31.84 | Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O... | [more] |
Q9ZT94 | 1.5e-56 | 31.13 | Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O... | [more] |
P10978 | 1.4e-14 | 21.72 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... | [more] |
Match Name | E-value | Identity | Description | |
A0A5A7U233 | 1.9e-155 | 53.39 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var.... | [more] |
A0A5D3CH97 | 1.9e-155 | 53.39 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var.... | [more] |
A0A438FJP6 | 1.2e-106 | 39.19 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX... | [more] |
A0A2Z7AWA7 | 1.6e-106 | 43.32 | Integrase catalytic domain-containing protein OS=Dorcoceras hygrometricum OX=472... | [more] |
A0A438H844 | 2.1e-98 | 38.95 | Retrovirus-related Pol polyprotein from transposon RE1 OS=Vitis vinifera OX=2976... | [more] |
Match Name | E-value | Identity | Description | |
AT5G48050.1 | 1.9e-14 | 24.81 | CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); BE... | [more] |
AT1G21280.1 | 8.2e-10 | 24.34 | CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); Ha... | [more] |