Lag0040971 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTGGCAATTCGCCGTGCGCCTCGTGCAAACTCCTCCGGCGACGGTGCGCCAAAGACTGTATTTTTGCTCCCTATTTCCCCTCCGATGACCCCCACAAGTTTGCTATTGTTCATAAGGTTTTTGGTGCCAGCAATGTCAGCAAAATGTTGCAGGTTCTTCTTCTTCTTCCCTTCCTTAATTCGGTATTTTTCGGGTTTCGGGTTTTGGGTTTCGAGTATTTTTCCTGTTGTTTCATTGAAGAATTGTGATACTTAGGATATGACAGAACTTCAAACAAGTTAGAGTTTTCGTCAACATCTTTATTGATATAAAACTTTTAATCCATCGGAGCTTAATTAATATGGAATTTTCAAAATGTCATTCAAACCTAAAACAATGGATTTGTTTCTCTAGTGTTCTTGTTCTTGTCAACATCTTTGTTGGTACAAAGTTTTTTAAAACATGTAAATACAACGAATAAAACATCACAAGTCTAAAACTCGAGTTTTATTTCTGATTTCTTACCAAAGTGAACATAACTCAACAATAATTGATAAATACTTTCGAGCAAGAAGTCAGAGGTTTGAATCTCTCAATCCCAAAAGGCTGAACTCAAAAAAAAAAAGTGTTCTGATTTCCCTTCAACATCTTTATTGGTTCAAAACCTTGGACAAAATTAAAAAATACATCACGAAAAACTAAAAATACAAACTTTTTCTACTATTCTTCTCATTCTCGTTTTAACACAAATTTTCAAAACTTGAAAAAGAACAAAAAAAAAAAAAAGAAAGAAAATCACAAGTTTGTACACAAGATTTTCTCTTATATTCTATCAGCATCTCCATTGATATGAAACTTTGACGACACATTAAAAACACACACATCACAACGAACTCTTCTCTCCATCATATCAATCGCCACAAAACTTTTCAAGACATATCACAATCCTTAAACACGAGTTTTCTCTACTAATTCAACCCGGTTTTCGAGTGGATTAAAGAAGGAAAAAACAAATAAATTTGCATTTTTATGAACATTTAATTTCTTGAAACAGGAACTGCCGGTGCAACAAAGAGGCGACGCCGTGATGAGCCTAGTTTATGAGGCAAGTGCAAGAGTGAGGGATCCAGTTTATGGCTGCGTAGGGGCAATTTCGTACTTACAAAACCAAGTCTCACAGCTACAAATGCAATTGGCTGTGGCTCAAGCTGAGATTCTTTGCATCCAAATGCAACAAGACCACCCCGTTTTCCCAAATTGCCCTCAGATCCACTCCGATGACAAACCGCCGTCGTCTCTCCTACTCCCGCCGCCGTCTCCGCCGCCCTCCCAGTGCCTCAATTTTGCTTCCTCTCCCAATGTAATTTATGACACCATTTTTGGACATGACATAGTTTCTTAA ATGGGTGGCAATTCGCCGTGCGCCTCGTGCAAACTCCTCCGGCGACGGTGCGCCAAAGACTGTATTTTTGCTCCCTATTTCCCCTCCGATGACCCCCACAAGTTTGCTATTGTTCATAAGGTTTTTGGTGCCAGCAATGTCAGCAAAATGTTGCAGGAACTGCCGGTGCAACAAAGAGGCGACGCCGTGATGAGCCTAGTTTATGAGGCAAGTGCAAGAGTGAGGGATCCAGTTTATGGCTGCGTAGGGGCAATTTCGTACTTACAAAACCAAGTCTCACAGCTACAAATGCAATTGGCTGTGGCTCAAGCTGAGATTCTTTGCATCCAAATGCAACAAGACCACCCCGTTTTCCCAAATTGCCCTCAGATCCACTCCGATGACAAACCGCCGTCGTCTCTCCTACTCCCGCCGCCGTCTCCGCCGCCCTCCCAGTGCCTCAATTTTGCTTCCTCTCCCAATGTAATTTATGACACCATTTTTGGACATGACATAGTTTCTTAA ATGGGTGGCAATTCGCCGTGCGCCTCGTGCAAACTCCTCCGGCGACGGTGCGCCAAAGACTGTATTTTTGCTCCCTATTTCCCCTCCGATGACCCCCACAAGTTTGCTATTGTTCATAAGGTTTTTGGTGCCAGCAATGTCAGCAAAATGTTGCAGGAACTGCCGGTGCAACAAAGAGGCGACGCCGTGATGAGCCTAGTTTATGAGGCAAGTGCAAGAGTGAGGGATCCAGTTTATGGCTGCGTAGGGGCAATTTCGTACTTACAAAACCAAGTCTCACAGCTACAAATGCAATTGGCTGTGGCTCAAGCTGAGATTCTTTGCATCCAAATGCAACAAGACCACCCCGTTTTCCCAAATTGCCCTCAGATCCACTCCGATGACAAACCGCCGTCGTCTCTCCTACTCCCGCCGCCGTCTCCGCCGCCCTCCCAGTGCCTCAATTTTGCTTCCTCTCCCAATGTAATTTATGACACCATTTTTGGACATGACATAGTTTCTTAA MGGNSPCASCKLLRRRCAKDCIFAPYFPSDDPHKFAIVHKVFGASNVSKMLQELPVQQRGDAVMSLVYEASARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQQDHPVFPNCPQIHSDDKPPSSLLLPPPSPPPSQCLNFASSPNVIYDTIFGHDIVS Homology
BLAST of Lag0040971 vs. NCBI nr
Match: XP_038893139.1 (LOB domain-containing protein 12-like [Benincasa hispida]) HSP 1 Score: 335.9 bits (860), Expect = 2.0e-88 Identity = 165/167 (98.80%), Postives = 166/167 (99.40%), Query Frame = 0
BLAST of Lag0040971 vs. NCBI nr
Match: XP_004148190.1 (LOB domain-containing protein 12 [Cucumis sativus] >KGN50694.1 hypothetical protein Csa_005796 [Cucumis sativus]) HSP 1 Score: 332.0 bits (850), Expect = 2.9e-87 Identity = 166/168 (98.81%), Postives = 166/168 (98.81%), Query Frame = 0
BLAST of Lag0040971 vs. NCBI nr
Match: XP_023536420.1 (LOB domain-containing protein 12-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 330.9 bits (847), Expect = 6.5e-87 Identity = 163/167 (97.60%), Postives = 164/167 (98.20%), Query Frame = 0
BLAST of Lag0040971 vs. NCBI nr
Match: XP_022957028.1 (LOB domain-containing protein 12-like [Cucurbita moschata] >KAG6600910.1 LOB domain-containing protein 12, partial [Cucurbita argyrosperma subsp. sororia] >KAG7031545.1 LOB domain-containing protein 12, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 329.3 bits (843), Expect = 1.9e-86 Identity = 162/167 (97.01%), Postives = 164/167 (98.20%), Query Frame = 0
BLAST of Lag0040971 vs. NCBI nr
Match: KAA0035899.1 (LOB domain-containing protein 12-like [Cucumis melo var. makuwa] >TYK19054.1 LOB domain-containing protein 12-like [Cucumis melo var. makuwa]) HSP 1 Score: 328.9 bits (842), Expect = 2.5e-86 Identity = 165/168 (98.21%), Postives = 165/168 (98.21%), Query Frame = 0
BLAST of Lag0040971 vs. ExPASy Swiss-Prot
Match: Q8LBW3 (LOB domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN=LBD12 PE=1 SV=2) HSP 1 Score: 212.2 bits (539), Expect = 4.4e-54 Identity = 109/134 (81.34%), Postives = 117/134 (87.31%), Query Frame = 0
BLAST of Lag0040971 vs. ExPASy Swiss-Prot
Match: Q9SHE9 (LOB domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=LBD4 PE=1 SV=1) HSP 1 Score: 178.7 bits (452), Expect = 5.4e-44 Identity = 89/139 (64.03%), Postives = 110/139 (79.14%), Query Frame = 0
BLAST of Lag0040971 vs. ExPASy Swiss-Prot
Match: Q9LQR0 (LOB domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=LBD1 PE=2 SV=1) HSP 1 Score: 154.5 bits (389), Expect = 1.1e-36 Identity = 73/111 (65.77%), Postives = 88/111 (79.28%), Query Frame = 0
BLAST of Lag0040971 vs. ExPASy Swiss-Prot
Match: Q9SK08 (LOB domain-containing protein 11 OS=Arabidopsis thaliana OX=3702 GN=LBD11 PE=2 SV=2) HSP 1 Score: 152.5 bits (384), Expect = 4.1e-36 Identity = 72/109 (66.06%), Postives = 86/109 (78.90%), Query Frame = 0
BLAST of Lag0040971 vs. ExPASy Swiss-Prot
Match: Q9SA51 (LOB domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=LBD3 PE=2 SV=1) HSP 1 Score: 152.1 bits (383), Expect = 5.4e-36 Identity = 73/107 (68.22%), Postives = 88/107 (82.24%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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