Lag0040641 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0040641
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	GEM-like protein 4
Location	chr13: 6817304 .. 6821005 (+)
RNA-Seq Expression	Lag0040641
Synteny	Lag0040641

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAACCCCAATTCAAGAACAGGTGTTTGGAGTTCTTCAGATGAAGTCTAGACTCTTGCCTGATCCTTCAAAGCATCGCCACCAATCGTCTTCCGACGTCGATGGATGTCAATCGATTAAGAAATGTAAGCTAAGTGCACGTTCGAGAGAGTCATGTTCGAAATCATCTCGAAACATATCAATTTCATGTTTGATTTTAAACGTGATTTTCATATTATCAAATTTGATTTTGAATTATTCAAGGCGTGTTTCGGAGTGATTTTGAATGACAAAAGTGATGATTTTAACTCTTTCAAAATCACTCCCAAGCATGTTCTAAGAAGAAGAGTGTTTCTCTTTTGATTGAATATAGGATAGATGAATCCATGAGTTGTTATTTGATTGGTCTTGACCAAATTGCTAATTTGGTTTTTGAATTGCTACACAGATAATGGAAAAGATTGGATCTTGAATAGAGTCAACAAAAATGGGAGAAAAACAGATAGTATCATTCACGCATTACGAGAACATGGTAAGTCGATATATCGGATCAAGATTTGGAATTTGAATTTGACATGGTCCAACATTCTCATACTACGACGAGAATGTACCATCTACTTCATTTGACTACTTAATTATTAGATAAAAATTATTCTTACCCACGTTAAGGATAAATATATAATTTATAAAGTGACACATTCTAGTCGTTTGAATCAAGTCTGAAAATATTTAGGCCAACTTAAGAATCTCGAATCTTAGTTCAAATCTTGGATCTGGGGCGTTAAATGAAATCTGGGTTTGGTTCAATTTCTGATTTTTGACATTGAACTTTGCAGTGAAATTAGGAGCCAAGATCTCAGACACTGTAAAGGGAAAGCTGAGTTTAGGAGCCAAAATTCTGAGAGTTGGTGGACTCAGAAAAATTTACAAGAAACTATTTTCAGTGAATGAAGGAGAGAAGCTTTTGAAGGCTTCACAGTGTTATTTGTCAACAACAGCTGGACCTTTGGTTGGCCTTTTGTTCATCTCCACACATAAAATTGCTTTTTGTAGTGACAAATCCATCAAAGTCTCTTCACCAAATGGAGATCATATCAGATTTCATTACAAAGTCAGTTCTTTAATCTTCTATCTCTATTGCTTTATTATTTTTTTTTTTCTCTCTCTCTCTGTGTAGTTTAAGAAGTTAATAATTAATATATAAATGTTGAATTAATTTTCAGGTTGTGATTCCAGTTGAGAAGGTGATGAGAGTAAATGAAAGTGAGAATGTTGAGAAAGCTTCACAAAAGTACATACAAATAGAGACAGTGGACAACTTTGAGTTTTGGTTTATGGGTTTTCTAAATTATCAATCAGCTTTCAACTCTCTTCAGAGAGTAGAAGGAAGATCATTTTGAGTTTGTTTTTCTGATGGCTTGTTGATGGAGATTTGTGTATATATGTGCAATTTGAAGCACAAAATAATGTTGAGATTTTGTATAGATCAATTATTCAATCTAAAATGAGAAAATTCCATATTTGATTTTCCTTCATGATTTGTCCAAAAAGACGATTTTATTAATCACGTAAATGAGAATCATATAGTGAGAAAACTAGCACTACAAAAGTTTTGAACTTTTCCGACCGCATAAAGCGTCAGGAAAAGCAACCCTAATTTTTTTGTAGTATAGAAAAACAATTGCCAATTAAAGACAATACAATAAGAAGAACAAATCTACGAAAAAAAAAAACAATTTGGAAGACGAGACAGAAGCAAATAGGATCCTAATAGTGAAAAATTCATGTTTTGTTTGTTGGATAGATCAAATTATCTAAGGACAATAGTCTATGCTGACTATGCAGCTAAAATTATGAACTATCCATCACTTTCTTTTCTATGGACGGCGACTTCAACCATACTTTTTTCTTTATTTTTCTTTTCATTACGAAAATCAACCAAACATACATTATCATGGGATTTTTCTAAATTTCTTTTTCTTATTATCTTATTGTGAGTCACAAGAGATTTTTTATTTTTATTTTTTTCTTCTGTTGCCCATATCTCTCTTCATAATAATCCACTTTCAATATCTCAAATTCAAACCTATGTAGACCAATTAATATGTTTTTCTAATTATATTGTAACATCATCTCTCTTCTCTGAATTTATGCAATATGTAATTGCATGCAGTTTGTGAAATTCCTACAAAAGTGAGCAGATGAAAGTAATGAGAGAATGTGAGAAGAAGGTGTTCAGATAAAGAAATAACATGGTGGGAAAGCAGGAGGTCTTATTTATGTTCGAACTTGGGATGATTATGGGTATTGTGGAGATATATGTGTGGTGTAGGGGATTGAACATGTAGGGGTAGGGGATTGAACCTACAACCTCTTGATCGGAATACAAGTTTTATGTCAATTGAGTCATGTTCTTGTTGGCCTGTAAAATGTTTTAATTGTTAATTATTGATTTAGGGTTTTAAGCGATTCAATTTTTTAAAGTTGAAGGTTTTACCTGAAGAAAATTCTACTTTAGAATTTTTATTGACTTAAAAAAAATCATTTTTTTAAGTGTGATCTATTTTATTGAATTAAGATGGGGTAAAATACCTTTTTGGTCCCTCATATTTCGGATCAGTTTCTAATAGGTCCTTAGATTTTAAAATTGACAATCAAGTCCCCCAAATTAAAGAAATAGTTCAATTTAATCCCTGTGCCGTTAGTTTTTAACGGAGTGATGACGTGTCAATTTGTTATAAATAAAATAATTATTTTTTAATTAAAATAATAATAAAATAAAAAATAATTTTAAAAAAAATCTTTCACTTCTCTCTCCTCCCCCAATCGATTCCCCTCCCCTTTCCTTCCCCTTCCCCTTCCCCTTCCCACCGTCAGTGACCTTCTCCTTCTTGCCGCCATCGCCACCGCCACCGCCTCCTCCTTTTTCTTCTTCTTCAAAACCACCGAACCCACCCCCTTCCTTTCTTCTTCTTAAAAAACAAACTCACCTCCCTTCCTTCAAAGAAACCCACAACCACAAATAAACCCCCTTCGGTTCCGACTCTGTTTTTTTTTTTTTTTTTTTTTTTTTTAAATTTTGTTCTCCTTTTTCTAGAGGCTTGATGGTGTAGCTGACGAATTCGGGGACAAAGAAGATTCCAAGGACGAAGAGGCTGAAGAAGGAGGTTGAGGATTCTTTGGAGGACTTACTCGATCAGTTTCACAGGTGATCCAAATCCGAGTTCTCTTCCGAGGTATTGCTACGATTCTCCTTTTCTCTGTATGATCTGATTGAAATCGATTTCGTTCGTTTACTTTATTTCTGAAGTCGTTTCATATGAAGGTCGAACTGAATTCTCTAGAAAAGTTCTCGAAATGTTGGAGCTCATTCGTCTAGAATTGATCAGCCTTTGTTGTAGTTCTGAAATCAATCATAGATTTGCTCTTAGAAGATGTGTTTCTTTCTGGTTTTCTTGTGGTGATGGCCAATAGAGTAGCTGTATGATATTAGGGTATTGATGATGTTTGTACTACGGTTGTGTTTCTTCTTCTGAACATGGAATTAGGGTTTTATTTTGAATTTGTTTTTCAATATGCAGAAAATGGAGAAAGAAGGCAAAGAAAGGAGATGAGAACGAAGGCAAAGAAAGGAGATGAGAACGAAGGCAAAGAAACAACAGATCAAAGCCGTTGTGCCAGTGCGAGGGATTTTCATAGTGGCGACGTGGGTGAGATCTGA

mRNA sequence

ATGAAAACCCCAATTCAAGAACAGGTGTTTGGAGTTCTTCAGATGAAGTCTAGACTCTTGCCTGATCCTTCAAAGCATCGCCACCAATCGTCTTCCGACGTCGATGGATGTCAATCGATTAAGAAATATAATGGAAAAGATTGGATCTTGAATAGAGTCAACAAAAATGGGAGAAAAACAGATAGTATCATTCACGCATTACGAGAACATGTGAAATTAGGAGCCAAGATCTCAGACACTGTAAAGGGAAAGCTGAGTTTAGGAGCCAAAATTCTGAGAGTTGGTGGACTCAGAAAAATTTACAAGAAACTATTTTCAGTGAATGAAGGAGAGAAGCTTTTGAAGGCTTCACAGTGTTATTTGTCAACAACAGCTGGACCTTTGGTTGGCCTTTTGTTCATCTCCACACATAAAATTGCTTTTTGTAGTGACAAATCCATCAAAGTCTCTTCACCAAATGGAGATCATATCAGATTTCATTACAAACTGACGAATTCGGGGACAAAGAAGATTCCAAGGACGAAGAGGCTGAAGAAGGAGGTTGAGGATTCTTTGGAGGACTTACTCGATCAGTTTCACAGAAAAGTTCTCGAAATGTTGGAGCTCATTCGTCTAGAATTGATCAGCCTTTGTTGTAGTTCTGAAATCAATCATAGATTTGCTCTTAGAAGATGTGTTTCTTTCTGGTTTTCTTGTGAAAATGGAGAAAGAAGGCAAAGAAAGGAGATGAGAACGAAGGCAAAGAAAGGAGATGAGAACGAAGGCAAAGAAACAACAGATCAAAGCCGTTGTGCCAGTGCGAGGGATTTTCATAGTGGCGACGTGGGTGAGATCTGA

Coding sequence (CDS)

ATGAAAACCCCAATTCAAGAACAGGTGTTTGGAGTTCTTCAGATGAAGTCTAGACTCTTGCCTGATCCTTCAAAGCATCGCCACCAATCGTCTTCCGACGTCGATGGATGTCAATCGATTAAGAAATATAATGGAAAAGATTGGATCTTGAATAGAGTCAACAAAAATGGGAGAAAAACAGATAGTATCATTCACGCATTACGAGAACATGTGAAATTAGGAGCCAAGATCTCAGACACTGTAAAGGGAAAGCTGAGTTTAGGAGCCAAAATTCTGAGAGTTGGTGGACTCAGAAAAATTTACAAGAAACTATTTTCAGTGAATGAAGGAGAGAAGCTTTTGAAGGCTTCACAGTGTTATTTGTCAACAACAGCTGGACCTTTGGTTGGCCTTTTGTTCATCTCCACACATAAAATTGCTTTTTGTAGTGACAAATCCATCAAAGTCTCTTCACCAAATGGAGATCATATCAGATTTCATTACAAACTGACGAATTCGGGGACAAAGAAGATTCCAAGGACGAAGAGGCTGAAGAAGGAGGTTGAGGATTCTTTGGAGGACTTACTCGATCAGTTTCACAGAAAAGTTCTCGAAATGTTGGAGCTCATTCGTCTAGAATTGATCAGCCTTTGTTGTAGTTCTGAAATCAATCATAGATTTGCTCTTAGAAGATGTGTTTCTTTCTGGTTTTCTTGTGAAAATGGAGAAAGAAGGCAAAGAAAGGAGATGAGAACGAAGGCAAAGAAAGGAGATGAGAACGAAGGCAAAGAAACAACAGATCAAAGCCGTTGTGCCAGTGCGAGGGATTTTCATAGTGGCGACGTGGGTGAGATCTGA

Protein sequence

MKTPIQEQVFGVLQMKSRLLPDPSKHRHQSSSDVDGCQSIKKYNGKDWILNRVNKNGRKTDSIIHALREHVKLGAKISDTVKGKLSLGAKILRVGGLRKIYKKLFSVNEGEKLLKASQCYLSTTAGPLVGLLFISTHKIAFCSDKSIKVSSPNGDHIRFHYKLTNSGTKKIPRTKRLKKEVEDSLEDLLDQFHRKVLEMLELIRLELISLCCSSEINHRFALRRCVSFWFSCENGERRQRKEMRTKAKKGDENEGKETTDQSRCASARDFHSGDVGEI

Homology

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BLAST of Lag0040641 vs. NCBI nr
Match: XP_022139160.1 (GEM-like protein 4 [Momordica charantia])

HSP 1 Score: 270.0 bits (689), Expect = 2.3e-68
Identity = 138/170 (81.18%), Postives = 148/170 (87.06%), Query Frame = 0


Query: 1   MKTPIQEQVFGVLQMKS------RLLPDPSKHRHQSSSDVDGCQSIKKYNGKDWILNRVN 60
           MKTPIQEQV G+  MKS      RLLPD +          DGCQSIKKYNGKDWILNRVN
Sbjct: 1   MKTPIQEQVLGIQMMKSLALTRARLLPDIA----------DGCQSIKKYNGKDWILNRVN 60

Query: 61  KNGRKTDSIIHALREHVKLGAKISDTVKGKLSLGAKILRVGGLRKIYKKLFSVNEGEKLL 120
           KNGRKTDSIIH LREHVKLGAKIS+TVKGKLSLGA+ILRVGGLRKIYKKLF+V+EGEKLL
Sbjct: 61  KNGRKTDSIIHGLREHVKLGAKISETVKGKLSLGARILRVGGLRKIYKKLFAVSEGEKLL 120

Query: 121 KASQCYLSTTAGPLVGLLFISTHKIAFCSDKSIKVSSPNGDHIRFHYKLT 165
           KASQCYLSTTAGPL GLLFISTHKIAFCSDKS+K+SSPNGDH+RFHYK+T
Sbjct: 121 KASQCYLSTTAGPLAGLLFISTHKIAFCSDKSLKLSSPNGDHLRFHYKVT 160

[Close]

BLAST of Lag0040641 vs. NCBI nr
Match: XP_038892955.1 (GEM-like protein 7 [Benincasa hispida])

HSP 1 Score: 268.9 bits (686), Expect = 5.0e-68
Identity = 139/170 (81.76%), Postives = 151/170 (88.82%), Query Frame = 0


Query: 1   MKTPIQEQVFGVLQMKS------RLLPDPSKHRHQSSSDVDGCQSIKKYNGKDWILNRVN 60
           MKT IQEQV   +QMKS      RLL DPSKH H SSSD DG QSIKKYNGKDW+LNR+N
Sbjct: 1   MKTTIQEQVILGIQMKSLGLARARLLGDPSKHLHISSSD-DGSQSIKKYNGKDWVLNRLN 60

Query: 61  KNGRKTDSIIHALREHVKLGAKISDTVKGKLSLGAKILRVGGLRKIYKKLFSVNEGEKLL 120
           KNG+KTD+IIHALREHVKLGAKIS+TVKGKLSLGA+ILRVGGLRKIYKKLFS+ EGEKL+
Sbjct: 61  KNGKKTDNIIHALREHVKLGAKISETVKGKLSLGARILRVGGLRKIYKKLFSMTEGEKLI 120

Query: 121 KASQCYLSTTAGPLVGLLFISTHKIAFCSDKSIKVSSPNGDHIRFHYKLT 165
           KASQCYLSTTAGPL GLLFIS+HKIAFCSDKSIK+SS NGDHIR HYK+T
Sbjct: 121 KASQCYLSTTAGPLAGLLFISSHKIAFCSDKSIKLSSQNGDHIRIHYKVT 169

[Close]

BLAST of Lag0040641 vs. NCBI nr
Match: XP_011655500.1 (GEM-like protein 7 [Cucumis sativus] >KGN51561.1 hypothetical protein Csa_008634 [Cucumis sativus])

HSP 1 Score: 260.0 bits (663), Expect = 2.3e-65
Identity = 136/170 (80.00%), Postives = 150/170 (88.24%), Query Frame = 0


Query: 1   MKTPIQEQVFGVLQMKS------RLLPDPSKHRHQSSSDVDGCQSIKKYNGKDWILNRVN 60
           MKT IQEQ+   +QMKS      RLL DPSK+ H SSSD DG QSIKKYNGKD ILNR+N
Sbjct: 1   MKTTIQEQIVLGIQMKSLGLARARLLGDPSKYLHISSSD-DGSQSIKKYNGKDCILNRLN 60

Query: 61  KNGRKTDSIIHALREHVKLGAKISDTVKGKLSLGAKILRVGGLRKIYKKLFSVNEGEKLL 120
           KNG+KTD+IIHALREHVKLGAKIS+TVKGKLSLGA+ILRVGG+RKIYKKLFS++E EKLL
Sbjct: 61  KNGKKTDNIIHALREHVKLGAKISETVKGKLSLGARILRVGGVRKIYKKLFSMSEEEKLL 120

Query: 121 KASQCYLSTTAGPLVGLLFISTHKIAFCSDKSIKVSSPNGDHIRFHYKLT 165
           K SQCYLSTTAGPL GLLFISTHKIAFCSDKSIK++SPNGDHIR HYK+T
Sbjct: 121 KVSQCYLSTTAGPLPGLLFISTHKIAFCSDKSIKIASPNGDHIRIHYKVT 169

[Close]

BLAST of Lag0040641 vs. NCBI nr
Match: XP_022956362.1 (putative GEM-like protein 8 [Cucurbita moschata] >KAG6601068.1 GEM-like protein 4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 258.8 bits (660), Expect = 5.2e-65
Identity = 135/171 (78.95%), Postives = 151/171 (88.30%), Query Frame = 0


Query: 1   MKTPIQEQVFGVLQMKS------RLLPDPSKHRHQSSSDVDGCQSIKKYNGKDWILNRVN 60
           MKT IQEQV G  QMKS      R L DPSKH H SSSD DG QSIKKYNGKDWILNR++
Sbjct: 1   MKTTIQEQVLGA-QMKSLALARARFLADPSKHLHISSSD-DGSQSIKKYNGKDWILNRLH 60

Query: 61  KNGRKTDSIIHALREHVKLGAKISDTVKGKLSLGAKILRVGGLRKIYKKLFSVNEGEKLL 120
           KNGRKTD+IIHALR+HVKLGAKI++TVKGKLSLGA+I+RVGG+RKIYKKLF+V+EGEKLL
Sbjct: 61  KNGRKTDNIIHALRQHVKLGAKITETVKGKLSLGARIVRVGGVRKIYKKLFTVSEGEKLL 120

Query: 121 KASQCYLSTTAGPLVGLLFISTHKIAFCSDKSIKVSSPNG-DHIRFHYKLT 165
           KASQCYLSTTAGP+ GLLFISTH IAFCSDKSIK+SSPNG +H+R HYK+T
Sbjct: 121 KASQCYLSTTAGPMAGLLFISTHNIAFCSDKSIKLSSPNGEEHVRIHYKVT 169

[Close]

BLAST of Lag0040641 vs. NCBI nr
Match: XP_023513103.1 (putative GEM-like protein 8 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 258.8 bits (660), Expect = 5.2e-65
Identity = 135/171 (78.95%), Postives = 151/171 (88.30%), Query Frame = 0


Query: 1   MKTPIQEQVFGVLQMKS------RLLPDPSKHRHQSSSDVDGCQSIKKYNGKDWILNRVN 60
           MKT IQEQV G  QMKS      R L DPSKH H SSSD DG QSIKKYNGKDWILNR++
Sbjct: 1   MKTTIQEQVLGA-QMKSLALARARFLADPSKHLHISSSD-DGSQSIKKYNGKDWILNRLH 60

Query: 61  KNGRKTDSIIHALREHVKLGAKISDTVKGKLSLGAKILRVGGLRKIYKKLFSVNEGEKLL 120
           KNGRKTD+IIHALR+HVKLGAKI++TVKGKLSLGA+I+RVGG+RKIYKKLF+V+EGEKLL
Sbjct: 61  KNGRKTDNIIHALRQHVKLGAKITETVKGKLSLGARIVRVGGVRKIYKKLFTVSEGEKLL 120

Query: 121 KASQCYLSTTAGPLVGLLFISTHKIAFCSDKSIKVSSPNG-DHIRFHYKLT 165
           KASQCYLSTTAGP+ GLLFISTH IAFCSDKSIK+SSPNG +H+R HYK+T
Sbjct: 121 KASQCYLSTTAGPMAGLLFISTHNIAFCSDKSIKLSSPNGEEHVRIHYKVT 169

[Close]

BLAST of Lag0040641 vs. ExPASy Swiss-Prot
Match: Q9FTA0 (GEM-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=At5g08350 PE=2 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 1.2e-32
Identity = 84/172 (48.84%), Postives = 114/172 (66.28%), Query Frame = 0


Query: 20  LPDP---SKHRHQSSSDVDGCQSIKKYNGKDWILNRVNKNGRKTDSIIHALREHVKLGAK 79
           LPDP   +K R  +SS      ++K       IL R     +KTD   + +R+  K+  K
Sbjct: 24  LPDPASFNKFRVPASSKKSEQSNVKS------ILKR-----KKTDGFTNGVRDQSKIRPK 83

Query: 80  ISDTVKGKLSLGAKILRVGGLRKIYKKLFSVNEGEKLLKASQCYLSTTAGPLVGLLFIST 139
           +++TVK KLSLGA+IL+VGGL KI+K+LF V+EGEKL K  QCYLSTTAGP+ GLLFIS+
Sbjct: 84  LTETVKRKLSLGARILQVGGLEKIFKRLFRVSEGEKLFKMYQCYLSTTAGPIAGLLFISS 143

Query: 140 HKIAFCSDKSIKVSSPNGDHIRFHYKLTNSGTK--KIPRTKRLKKEVEDSLE 187
            K+AFCS++SIKV SP GD IR HYK++    K  ++ +++  KK  +  LE
Sbjct: 144 KKMAFCSERSIKVDSPQGDIIRVHYKVSIPLCKIDRVNQSQNTKKPSQKYLE 184

[Close]

BLAST of Lag0040641 vs. ExPASy Swiss-Prot
Match: Q9FMW4 (Putative GEM-like protein 8 OS=Arabidopsis thaliana OX=3702 GN=At5g23370 PE=3 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 6.0e-32
Identity = 67/107 (62.62%), Postives = 88/107 (82.24%), Query Frame = 0


Query: 58  RKTDSIIHALREHVKLGAKISDTVKGKLSLGAKILRVGGLRKIYKKLFSVNEGEKLLKAS 117
           +K DS  + +R+  KLG K+++TVK KLSLGA+IL++GGL KIYK+LF V++ EKL KA 
Sbjct: 55  KKNDSFTNGVRDQDKLGPKLTETVKRKLSLGARILQMGGLEKIYKRLFKVSDEEKLFKAY 114

Query: 118 QCYLSTTAGPLVGLLFISTHKIAFCSDKSIKVSSPNGDHIRFHYKLT 165
           QCYLSTTAGP+ GLLFIS+ KIAFCS++SIKV+SP G+  R HYK++
Sbjct: 115 QCYLSTTAGPIAGLLFISSKKIAFCSERSIKVASPQGELNRVHYKVS 161

[Close]

BLAST of Lag0040641 vs. ExPASy Swiss-Prot
Match: Q9FMW6 (GEM-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=At5g23350 PE=2 SV=2)

HSP 1 Score: 139.0 bits (349), Expect = 7.9e-32
Identity = 80/148 (54.05%), Postives = 101/148 (68.24%), Query Frame = 0


Query: 20  LPDP---SKHRHQSSSDVDGCQSIKKYNGKDWILNRVNKNGRKTDSIIHALREHVKLGAK 79
           LPDP   + H+  +SS V    S     GK  +        +KTDS  +  R+  KLG K
Sbjct: 24  LPDPASINNHQIPTSSKV----SYLTGKGKSML------RKKKTDSFTNGARDQDKLGPK 83

Query: 80  ISDTVKGKLSLGAKILRVGGLRKIYKKLFSVNEGEKLLKASQCYLSTTAGPLVGLLFIST 139
           +++TVK KLSLGAKIL++GGL KIYK+LF V + EKL KA QCYLSTTAGP+ GLLFIS+
Sbjct: 84  LTETVKRKLSLGAKILQMGGLEKIYKRLFKVCDQEKLFKAYQCYLSTTAGPIAGLLFISS 143

Query: 140 HKIAFCSDKSIKVSSPNGDHIRFHYKLT 165
            KIAFCS++SIKV+SP G   R HYK++
Sbjct: 144 KKIAFCSERSIKVASPQGVLSRVHYKVS 161

[Close]

BLAST of Lag0040641 vs. ExPASy Swiss-Prot
Match: Q9FMW5 (GEM-like protein 7 OS=Arabidopsis thaliana OX=3702 GN=At5g23360 PE=2 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 2.3e-31
Identity = 68/107 (63.55%), Postives = 85/107 (79.44%), Query Frame = 0


Query: 58  RKTDSIIHALREHVKLGAKISDTVKGKLSLGAKILRVGGLRKIYKKLFSVNEGEKLLKAS 117
           +KTDS  +  R+  KLG K+++TVK KLSLGAKIL++GGL KIYK+LF V + EKL KA 
Sbjct: 47  KKTDSFTNGARDQDKLGPKLTETVKRKLSLGAKILQMGGLEKIYKRLFKVCDKEKLFKAY 106

Query: 118 QCYLSTTAGPLVGLLFISTHKIAFCSDKSIKVSSPNGDHIRFHYKLT 165
           QCYLSTT G + GLLFIS+ KIAFCS++SIKV+SP GD  R HYK++
Sbjct: 107 QCYLSTTEGSIAGLLFISSKKIAFCSERSIKVTSPQGDLTRVHYKVS 153

[Close]

BLAST of Lag0040641 vs. ExPASy Swiss-Prot
Match: Q9M122 (GEM-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=At4g01600 PE=2 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 6.5e-18
Identity = 47/126 (37.30%), Postives = 80/126 (63.49%), Query Frame = 0


Query: 46  KDWILNRVNKNG-------RKTDSIIHALREHVKLGAKISDTVKGKLSLGAKILRVGGLR 105
           KD +L  +N+ G       RK ++++  L++H+K    ISD    +LS G K++  GG  
Sbjct: 46  KDKVLEVLNRCGKKVEDATRKAEALVGGLKDHLKFSPSISDAAMARLSQGTKMIVEGGPE 105

Query: 106 KIYKKLFSVNEGEKLLKASQCYLSTTAGPLVGLLFISTHKIAFCSDKSIKV-SSPNGDHI 164
           +++++ F V   EKLL +  CY+STT+GP+ G+++IS  +IAFCSD +I++ SS  G+ +
Sbjct: 106 RVFQREFGVLAVEKLLDSFVCYISTTSGPVTGVIYISNRRIAFCSDYAIRLPSSAGGNGV 165

[Close]

BLAST of Lag0040641 vs. ExPASy TrEMBL
Match: A0A6J1CBI9 (GEM-like protein 4 OS=Momordica charantia OX=3673 GN=LOC111010133 PE=3 SV=1)

HSP 1 Score: 270.0 bits (689), Expect = 1.1e-68
Identity = 138/170 (81.18%), Postives = 148/170 (87.06%), Query Frame = 0


Query: 1   MKTPIQEQVFGVLQMKS------RLLPDPSKHRHQSSSDVDGCQSIKKYNGKDWILNRVN 60
           MKTPIQEQV G+  MKS      RLLPD +          DGCQSIKKYNGKDWILNRVN
Sbjct: 1   MKTPIQEQVLGIQMMKSLALTRARLLPDIA----------DGCQSIKKYNGKDWILNRVN 60

Query: 61  KNGRKTDSIIHALREHVKLGAKISDTVKGKLSLGAKILRVGGLRKIYKKLFSVNEGEKLL 120
           KNGRKTDSIIH LREHVKLGAKIS+TVKGKLSLGA+ILRVGGLRKIYKKLF+V+EGEKLL
Sbjct: 61  KNGRKTDSIIHGLREHVKLGAKISETVKGKLSLGARILRVGGLRKIYKKLFAVSEGEKLL 120

Query: 121 KASQCYLSTTAGPLVGLLFISTHKIAFCSDKSIKVSSPNGDHIRFHYKLT 165
           KASQCYLSTTAGPL GLLFISTHKIAFCSDKS+K+SSPNGDH+RFHYK+T
Sbjct: 121 KASQCYLSTTAGPLAGLLFISTHKIAFCSDKSLKLSSPNGDHLRFHYKVT 160

[Close]

BLAST of Lag0040641 vs. ExPASy TrEMBL
Match: A0A0A0KV22 (GRAM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G578990 PE=3 SV=1)

HSP 1 Score: 260.0 bits (663), Expect = 1.1e-65
Identity = 136/170 (80.00%), Postives = 150/170 (88.24%), Query Frame = 0


Query: 1   MKTPIQEQVFGVLQMKS------RLLPDPSKHRHQSSSDVDGCQSIKKYNGKDWILNRVN 60
           MKT IQEQ+   +QMKS      RLL DPSK+ H SSSD DG QSIKKYNGKD ILNR+N
Sbjct: 1   MKTTIQEQIVLGIQMKSLGLARARLLGDPSKYLHISSSD-DGSQSIKKYNGKDCILNRLN 60

Query: 61  KNGRKTDSIIHALREHVKLGAKISDTVKGKLSLGAKILRVGGLRKIYKKLFSVNEGEKLL 120
           KNG+KTD+IIHALREHVKLGAKIS+TVKGKLSLGA+ILRVGG+RKIYKKLFS++E EKLL
Sbjct: 61  KNGKKTDNIIHALREHVKLGAKISETVKGKLSLGARILRVGGVRKIYKKLFSMSEEEKLL 120

Query: 121 KASQCYLSTTAGPLVGLLFISTHKIAFCSDKSIKVSSPNGDHIRFHYKLT 165
           K SQCYLSTTAGPL GLLFISTHKIAFCSDKSIK++SPNGDHIR HYK+T
Sbjct: 121 KVSQCYLSTTAGPLPGLLFISTHKIAFCSDKSIKIASPNGDHIRIHYKVT 169

[Close]

BLAST of Lag0040641 vs. ExPASy TrEMBL
Match: A0A6J1GW39 (putative GEM-like protein 8 OS=Cucurbita moschata OX=3662 GN=LOC111458124 PE=3 SV=1)

HSP 1 Score: 258.8 bits (660), Expect = 2.5e-65
Identity = 135/171 (78.95%), Postives = 151/171 (88.30%), Query Frame = 0


Query: 1   MKTPIQEQVFGVLQMKS------RLLPDPSKHRHQSSSDVDGCQSIKKYNGKDWILNRVN 60
           MKT IQEQV G  QMKS      R L DPSKH H SSSD DG QSIKKYNGKDWILNR++
Sbjct: 1   MKTTIQEQVLGA-QMKSLALARARFLADPSKHLHISSSD-DGSQSIKKYNGKDWILNRLH 60

Query: 61  KNGRKTDSIIHALREHVKLGAKISDTVKGKLSLGAKILRVGGLRKIYKKLFSVNEGEKLL 120
           KNGRKTD+IIHALR+HVKLGAKI++TVKGKLSLGA+I+RVGG+RKIYKKLF+V+EGEKLL
Sbjct: 61  KNGRKTDNIIHALRQHVKLGAKITETVKGKLSLGARIVRVGGVRKIYKKLFTVSEGEKLL 120

Query: 121 KASQCYLSTTAGPLVGLLFISTHKIAFCSDKSIKVSSPNG-DHIRFHYKLT 165
           KASQCYLSTTAGP+ GLLFISTH IAFCSDKSIK+SSPNG +H+R HYK+T
Sbjct: 121 KASQCYLSTTAGPMAGLLFISTHNIAFCSDKSIKLSSPNGEEHVRIHYKVT 169

[Close]

BLAST of Lag0040641 vs. ExPASy TrEMBL
Match: A0A5A7SX89 (GEM-like protein 7 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G00690 PE=3 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 2.1e-64
Identity = 134/170 (78.82%), Postives = 146/170 (85.88%), Query Frame = 0


Query: 1   MKTPIQEQVFGVLQMKS------RLLPDPSKHRHQSSSDVDGCQSIKKYNGKDWILNRVN 60
           MKT IQEQ+   +QMKS      RLL DPSKH H S    DG QSIKKYNGKD ILNR+N
Sbjct: 1   MKTTIQEQIVLGIQMKSLGLARARLLGDPSKHLHISD---DGSQSIKKYNGKDCILNRLN 60

Query: 61  KNGRKTDSIIHALREHVKLGAKISDTVKGKLSLGAKILRVGGLRKIYKKLFSVNEGEKLL 120
           KNG+KTD+II ALREHVKLGAKIS+TVKGKLSLGA+ILRVGG+RKIYKKLFS+NE EKLL
Sbjct: 61  KNGKKTDNIIQALREHVKLGAKISETVKGKLSLGARILRVGGVRKIYKKLFSMNEEEKLL 120

Query: 121 KASQCYLSTTAGPLVGLLFISTHKIAFCSDKSIKVSSPNGDHIRFHYKLT 165
           K SQCYLSTTAGPL GLLFISTHKIAFCSDKSIK++SPNGDHIR HYK+T
Sbjct: 121 KVSQCYLSTTAGPLAGLLFISTHKIAFCSDKSIKIASPNGDHIRIHYKVT 167

[Close]

BLAST of Lag0040641 vs. ExPASy TrEMBL
Match: A0A1S3CPR8 (GEM-like protein 7 OS=Cucumis melo OX=3656 GN=LOC103503290 PE=3 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 2.1e-64
Identity = 134/170 (78.82%), Postives = 146/170 (85.88%), Query Frame = 0


Query: 1   MKTPIQEQVFGVLQMKS------RLLPDPSKHRHQSSSDVDGCQSIKKYNGKDWILNRVN 60
           MKT IQEQ+   +QMKS      RLL DPSKH H S    DG QSIKKYNGKD ILNR+N
Sbjct: 1   MKTTIQEQIVLGIQMKSLGLARARLLGDPSKHLHISD---DGSQSIKKYNGKDCILNRLN 60

Query: 61  KNGRKTDSIIHALREHVKLGAKISDTVKGKLSLGAKILRVGGLRKIYKKLFSVNEGEKLL 120
           KNG+KTD+II ALREHVKLGAKIS+TVKGKLSLGA+ILRVGG+RKIYKKLFS+NE EKLL
Sbjct: 61  KNGKKTDNIIQALREHVKLGAKISETVKGKLSLGARILRVGGVRKIYKKLFSMNEEEKLL 120

Query: 121 KASQCYLSTTAGPLVGLLFISTHKIAFCSDKSIKVSSPNGDHIRFHYKLT 165
           K SQCYLSTTAGPL GLLFISTHKIAFCSDKSIK++SPNGDHIR HYK+T
Sbjct: 121 KVSQCYLSTTAGPLAGLLFISTHKIAFCSDKSIKIASPNGDHIRIHYKVT 167

[Close]

BLAST of Lag0040641 vs. TAIR 10
Match: AT5G08350.1 (GRAM domain-containing protein / ABA-responsive protein-related )

HSP 1 Score: 141.7 bits (356), Expect = 8.7e-34
Identity = 84/172 (48.84%), Postives = 114/172 (66.28%), Query Frame = 0


Query: 20  LPDP---SKHRHQSSSDVDGCQSIKKYNGKDWILNRVNKNGRKTDSIIHALREHVKLGAK 79
           LPDP   +K R  +SS      ++K       IL R     +KTD   + +R+  K+  K
Sbjct: 24  LPDPASFNKFRVPASSKKSEQSNVKS------ILKR-----KKTDGFTNGVRDQSKIRPK 83

Query: 80  ISDTVKGKLSLGAKILRVGGLRKIYKKLFSVNEGEKLLKASQCYLSTTAGPLVGLLFIST 139
           +++TVK KLSLGA+IL+VGGL KI+K+LF V+EGEKL K  QCYLSTTAGP+ GLLFIS+
Sbjct: 84  LTETVKRKLSLGARILQVGGLEKIFKRLFRVSEGEKLFKMYQCYLSTTAGPIAGLLFISS 143

Query: 140 HKIAFCSDKSIKVSSPNGDHIRFHYKLTNSGTK--KIPRTKRLKKEVEDSLE 187
            K+AFCS++SIKV SP GD IR HYK++    K  ++ +++  KK  +  LE
Sbjct: 144 KKMAFCSERSIKVDSPQGDIIRVHYKVSIPLCKIDRVNQSQNTKKPSQKYLE 184

[Close]

BLAST of Lag0040641 vs. TAIR 10
Match: AT5G23370.1 (GRAM domain-containing protein / ABA-responsive protein-related )

HSP 1 Score: 139.4 bits (350), Expect = 4.3e-33
Identity = 67/107 (62.62%), Postives = 88/107 (82.24%), Query Frame = 0


Query: 58  RKTDSIIHALREHVKLGAKISDTVKGKLSLGAKILRVGGLRKIYKKLFSVNEGEKLLKAS 117
           +K DS  + +R+  KLG K+++TVK KLSLGA+IL++GGL KIYK+LF V++ EKL KA 
Sbjct: 55  KKNDSFTNGVRDQDKLGPKLTETVKRKLSLGARILQMGGLEKIYKRLFKVSDEEKLFKAY 114

Query: 118 QCYLSTTAGPLVGLLFISTHKIAFCSDKSIKVSSPNGDHIRFHYKLT 165
           QCYLSTTAGP+ GLLFIS+ KIAFCS++SIKV+SP G+  R HYK++
Sbjct: 115 QCYLSTTAGPIAGLLFISSKKIAFCSERSIKVASPQGELNRVHYKVS 161

[Close]

BLAST of Lag0040641 vs. TAIR 10
Match: AT5G23350.1 (GRAM domain-containing protein / ABA-responsive protein-related )

HSP 1 Score: 139.0 bits (349), Expect = 5.6e-33
Identity = 80/148 (54.05%), Postives = 101/148 (68.24%), Query Frame = 0


Query: 20  LPDP---SKHRHQSSSDVDGCQSIKKYNGKDWILNRVNKNGRKTDSIIHALREHVKLGAK 79
           LPDP   + H+  +SS V    S     GK  +        +KTDS  +  R+  KLG K
Sbjct: 86  LPDPASINNHQIPTSSKV----SYLTGKGKSML------RKKKTDSFTNGARDQDKLGPK 145

Query: 80  ISDTVKGKLSLGAKILRVGGLRKIYKKLFSVNEGEKLLKASQCYLSTTAGPLVGLLFIST 139
           +++TVK KLSLGAKIL++GGL KIYK+LF V + EKL KA QCYLSTTAGP+ GLLFIS+
Sbjct: 146 LTETVKRKLSLGAKILQMGGLEKIYKRLFKVCDQEKLFKAYQCYLSTTAGPIAGLLFISS 205

Query: 140 HKIAFCSDKSIKVSSPNGDHIRFHYKLT 165
            KIAFCS++SIKV+SP G   R HYK++
Sbjct: 206 KKIAFCSERSIKVASPQGVLSRVHYKVS 223

[Close]

BLAST of Lag0040641 vs. TAIR 10
Match: AT5G23360.1 (GRAM domain-containing protein / ABA-responsive protein-related )

HSP 1 Score: 137.5 bits (345), Expect = 1.6e-32
Identity = 68/107 (63.55%), Postives = 85/107 (79.44%), Query Frame = 0


Query: 58  RKTDSIIHALREHVKLGAKISDTVKGKLSLGAKILRVGGLRKIYKKLFSVNEGEKLLKAS 117
           +KTDS  +  R+  KLG K+++TVK KLSLGAKIL++GGL KIYK+LF V + EKL KA 
Sbjct: 47  KKTDSFTNGARDQDKLGPKLTETVKRKLSLGAKILQMGGLEKIYKRLFKVCDKEKLFKAY 106

Query: 118 QCYLSTTAGPLVGLLFISTHKIAFCSDKSIKVSSPNGDHIRFHYKLT 165
           QCYLSTT G + GLLFIS+ KIAFCS++SIKV+SP GD  R HYK++
Sbjct: 107 QCYLSTTEGSIAGLLFISSKKIAFCSERSIKVTSPQGDLTRVHYKVS 153

[Close]

BLAST of Lag0040641 vs. TAIR 10
Match: AT4G01600.1 (GRAM domain family protein )

HSP 1 Score: 92.8 bits (229), Expect = 4.6e-19
Identity = 47/126 (37.30%), Postives = 80/126 (63.49%), Query Frame = 0


Query: 46  KDWILNRVNKNG-------RKTDSIIHALREHVKLGAKISDTVKGKLSLGAKILRVGGLR 105
           KD +L  +N+ G       RK ++++  L++H+K    ISD    +LS G K++  GG  
Sbjct: 46  KDKVLEVLNRCGKKVEDATRKAEALVGGLKDHLKFSPSISDAAMARLSQGTKMIVEGGPE 105

Query: 106 KIYKKLFSVNEGEKLLKASQCYLSTTAGPLVGLLFISTHKIAFCSDKSIKV-SSPNGDHI 164
           +++++ F V   EKLL +  CY+STT+GP+ G+++IS  +IAFCSD +I++ SS  G+ +
Sbjct: 106 RVFQREFGVLAVEKLLDSFVCYISTTSGPVTGVIYISNRRIAFCSDYAIRLPSSAGGNGV 165

The following BLAST results are available for this feature:

BLAST of Lag0040641 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022139160.1	2.3e-68	81.18	GEM-like protein 4 [Momordica charantia]	[more]
XP_038892955.1	5.0e-68	81.76	GEM-like protein 7 [Benincasa hispida]	[more]
XP_011655500.1	2.3e-65	80.00	GEM-like protein 7 [Cucumis sativus] >KGN51561.1 hypothetical protein Csa_008634...	[more]
XP_022956362.1	5.2e-65	78.95	putative GEM-like protein 8 [Cucurbita moschata] >KAG6601068.1 GEM-like protein ...	[more]
XP_023513103.1	5.2e-65	78.95	putative GEM-like protein 8 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Lag0040641 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FTA0	1.2e-32	48.84	GEM-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=At5g08350 PE=2 SV=1	[more]
Q9FMW4	6.0e-32	62.62	Putative GEM-like protein 8 OS=Arabidopsis thaliana OX=3702 GN=At5g23370 PE=3 SV...	[more]
Q9FMW6	7.9e-32	54.05	GEM-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=At5g23350 PE=2 SV=2	[more]
Q9FMW5	2.3e-31	63.55	GEM-like protein 7 OS=Arabidopsis thaliana OX=3702 GN=At5g23360 PE=2 SV=1	[more]
Q9M122	6.5e-18	37.30	GEM-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=At4g01600 PE=2 SV=1	[more]

BLAST of Lag0040641 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CBI9	1.1e-68	81.18	GEM-like protein 4 OS=Momordica charantia OX=3673 GN=LOC111010133 PE=3 SV=1	[more]
A0A0A0KV22	1.1e-65	80.00	GRAM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G578990 PE=3 S...	[more]
A0A6J1GW39	2.5e-65	78.95	putative GEM-like protein 8 OS=Cucurbita moschata OX=3662 GN=LOC111458124 PE=3 S...	[more]
A0A5A7SX89	2.1e-64	78.82	GEM-like protein 7 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G00...	[more]
A0A1S3CPR8	2.1e-64	78.82	GEM-like protein 7 OS=Cucumis melo OX=3656 GN=LOC103503290 PE=3 SV=1	[more]

BLAST of Lag0040641 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G08350.1	8.7e-34	48.84	GRAM domain-containing protein / ABA-responsive protein-related	[more]
AT5G23370.1	4.3e-33	62.62	GRAM domain-containing protein / ABA-responsive protein-related	[more]
AT5G23350.1	5.6e-33	54.05	GRAM domain-containing protein / ABA-responsive protein-related	[more]
AT5G23360.1	1.6e-32	63.55	GRAM domain-containing protein / ABA-responsive protein-related	[more]
AT4G01600.1	4.6e-19	37.30	GRAM domain family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 171..191
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 239..264
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 239..278
None	No IPR available	PANTHER	PTHR31969:SF38	GEM-LIKE PROTEIN 4	coord: 1..171
IPR004182	GRAM domain	SMART	SM00568	gram2001c	coord: 99..209 e-value: 1.3E-8 score: 44.7
IPR004182	GRAM domain	PFAM	PF02893	GRAM	coord: 102..146 e-value: 2.2E-8 score: 34.0
IPR011993	PH-like domain superfamily	GENE3D	2.30.29.30		coord: 97..179 e-value: 8.4E-8 score: 34.0
IPR037848	GEM-like protein	PANTHER	PTHR31969	GEM-LIKE PROTEIN 2	coord: 1..171

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0040641.1	Lag0040641.1	mRNA