Lag0040459 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0040459
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	protein HHL1, chloroplastic
Location	chr13: 5021490 .. 5022623 (-)
RNA-Seq Expression	Lag0040459
Synteny	Lag0040459

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGTCGCCATGTCTCTCAACGCTCTGGTTCGACTTCCCCTTTCCAATTCCAAGCTACACGAAGATGGGCTGGTCCGCCACTCGCTCTTCTCCGCGAGGACCATTCAGAAGCCCGACCAGAGGCATCGCCAAGCTTTTCTCGTCGAAGCGAAGGGCAAAAGAGGGATGCAGTCTCGCCAGGTTCAAAGGGCTTCGCCTCCACCGCTGCCCAAGATTGAAGACGACGGCAACCCTAAATTCGTTATCTTCATCCGTATGGCCAATGTTTGTTCTCTCTCTATCCTTTTGATTACACCTTCTTTTTTTACTTTTCGGCGTGGTTTCTTTCTGTTGATTGATTCTCTGCCTCTCTGGAGTTCTTGTTGCTGAGGACATCGTTGGAATTTTTACATTCTAATTTGTTGTTTATAATATCTTTCTTCAGTGATATTGTTGTGTGATATGCCATCAAAAGATGTTCATTATTAACTCAAAATTCCGAAAAGGGTTGTTTTCTGAATAACAGGATTTCCATCATGTTCGTGAAGTTCAGTGTATTGCAAAAAATTATTGGGAATACCATATCTTTATCACCATCCACTTTTACGTTTATTTTGCAGGTTTATCTATGGTACCCGCTGAGTCTTATAAATGGTGGCACGACCGCCAAAATCATGGTTGCTGCAAAAGATAATTTTCTTGGGAAATATATCTATAAAGATACTCTGGCCAGGAATCTTGCTGCTGTTATTTACCGGGTAAGGTTCAATTATCATCGATTTTATTAATTCATCTGCAAAGAAGTTACTGTCTAACAGAGAAGATGACTATTGAAGATATTTTTCTCCATAAGCCGCCGGCCGCCGGGCGGAAATGGAGGAGGAGGGAGGCCCCTCCTCCCTCCCTTTTCTATTTTTTTTTAAAAAAAAACATTGAAGAAAAAGAAGAGAAGAAGAAAGAAAGGAAGAAGAAGAAAGAAGAAAGAAGAAAAAAAAAAAAAAATCAGTCGCCGGCGGCCGGCGGCCGGCGGCGGCGGCGGCGTGTGGTGGTCGCCGGTCGCCGGACTTAGGAAGAAGAAGAAGGAGAAGGGAGAAGATGGAGAAGAAGGAAGATGGAGAAGAAGAAGATGAGAGAGAAGGAGAGAAAGAATAA

mRNA sequence

ATGGAGGTCGCCATGTCTCTCAACGCTCTGGTTCGACTTCCCCTTTCCAATTCCAAGCTACACGAAGATGGGCTGGTCCGCCACTCGCTCTTCTCCGCGAGGACCATTCAGAAGCCCGACCAGAGGCATCGCCAAGCTTTTCTCGTCGAAGCGAAGGGCAAAAGAGGGATGCAGTCTCGCCAGGTTCAAAGGGCTTCGCCTCCACCGCTGCCCAAGATTGAAGACGACGGCAACCCTAAATTCGTTATCTTCATCCGTATGGCCAATGTTTATCTATGGTACCCGCTGAGTCTTATAAATGGTGGCACGACCGCCAAAATCATGGTTGCTGCAAAAGATAATTTTCTTGGGAAATATATCTATAAAGATACTCTGGCCAGGAATCTTGCTGCTGTTATTTACCGGGTAAGAAAAAGAAGAGAAGAAGAAAGAAAGGAAGAAGAAGAAAGAAGAAAGAAGAAAAAAAAAAAAAAATCAGTCGCCGGCGGCCGGCGGCCGGCGGCGGCGGCGGCGTGTGGTGGTCGCCGGTCGCCGGACTTAGGAAGAAGAAGAAGGAGAAGGGAGAAGATGGAGAAGAAGGAAGATGGAGAAGAAGAAGATGAGAGAGAAGGAGAGAAAGAATAA

Coding sequence (CDS)

ATGGAGGTCGCCATGTCTCTCAACGCTCTGGTTCGACTTCCCCTTTCCAATTCCAAGCTACACGAAGATGGGCTGGTCCGCCACTCGCTCTTCTCCGCGAGGACCATTCAGAAGCCCGACCAGAGGCATCGCCAAGCTTTTCTCGTCGAAGCGAAGGGCAAAAGAGGGATGCAGTCTCGCCAGGTTCAAAGGGCTTCGCCTCCACCGCTGCCCAAGATTGAAGACGACGGCAACCCTAAATTCGTTATCTTCATCCGTATGGCCAATGTTTATCTATGGTACCCGCTGAGTCTTATAAATGGTGGCACGACCGCCAAAATCATGGTTGCTGCAAAAGATAATTTTCTTGGGAAATATATCTATAAAGATACTCTGGCCAGGAATCTTGCTGCTGTTATTTACCGGGTAAGAAAAAGAAGAGAAGAAGAAAGAAAGGAAGAAGAAGAAAGAAGAAAGAAGAAAAAAAAAAAAAAATCAGTCGCCGGCGGCCGGCGGCCGGCGGCGGCGGCGGCGTGTGGTGGTCGCCGGTCGCCGGACTTAGGAAGAAGAAGAAGGAGAAGGGAGAAGATGGAGAAGAAGGAAGATGGAGAAGAAGAAGATGAGAGAGAAGGAGAGAAAGAATAA

Protein sequence

MEVAMSLNALVRLPLSNSKLHEDGLVRHSLFSARTIQKPDQRHRQAFLVEAKGKRGMQSRQVQRASPPPLPKIEDDGNPKFVIFIRMANVYLWYPLSLINGGTTAKIMVAAKDNFLGKYIYKDTLARNLAAVIYRVRKRREEERKEEEERRKKKKKKKSVAGGRRPAAAAACGGRRSPDLGRRRRRREKMEKKEDGEEEDEREGEKE

Homology

[Close]

BLAST of Lag0040459 vs. NCBI nr
Match: XP_038884174.1 (protein HHL1, chloroplastic isoform X1 [Benincasa hispida])

HSP 1 Score: 248.1 bits (632), Expect = 6.9e-62
Identity = 123/138 (89.13%), Postives = 130/138 (94.20%), Query Frame = 0


Query: 1   MEVAMSLNALVRLPLSNSKLHEDGLVRHSLFSARTIQKPDQRHRQAFLVEAKGKRGMQSR 60
           MEVAMSLNALVR+PLSNSKL EDGLVRHSLFSART+QKP+QRHR   +VEAKGK+GMQ+R
Sbjct: 1   MEVAMSLNALVRIPLSNSKLQEDGLVRHSLFSARTMQKPEQRHRHTLVVEAKGKKGMQAR 60

Query: 61  QVQRASPPPLPKIEDDGNPKFVIFIRMANVYLWYPLSLINGGTTAKIMVAAKDNFLGKYI 120
           Q QR +PPPLPKIEDDGNPKFVIFIRMANVYLWYPLSLINGGTTAKIMVAAKDNFLGKYI
Sbjct: 61  QSQRPAPPPLPKIEDDGNPKFVIFIRMANVYLWYPLSLINGGTTAKIMVAAKDNFLGKYI 120

Query: 121 YKDTLARNLAAVIYRVRK 139
           YKDTLARNLAAVIYR  K
Sbjct: 121 YKDTLARNLAAVIYRDEK 138

[Close]

BLAST of Lag0040459 vs. NCBI nr
Match: XP_038884175.1 (protein HHL1, chloroplastic isoform X2 [Benincasa hispida])

HSP 1 Score: 248.1 bits (632), Expect = 6.9e-62
Identity = 123/138 (89.13%), Postives = 130/138 (94.20%), Query Frame = 0


Query: 1   MEVAMSLNALVRLPLSNSKLHEDGLVRHSLFSARTIQKPDQRHRQAFLVEAKGKRGMQSR 60
           MEVAMSLNALVR+PLSNSKL EDGLVRHSLFSART+QKP+QRHR   +VEAKGK+GMQ+R
Sbjct: 1   MEVAMSLNALVRIPLSNSKLQEDGLVRHSLFSARTMQKPEQRHRHTLVVEAKGKKGMQAR 60

Query: 61  QVQRASPPPLPKIEDDGNPKFVIFIRMANVYLWYPLSLINGGTTAKIMVAAKDNFLGKYI 120
           Q QR +PPPLPKIEDDGNPKFVIFIRMANVYLWYPLSLINGGTTAKIMVAAKDNFLGKYI
Sbjct: 61  QSQRPAPPPLPKIEDDGNPKFVIFIRMANVYLWYPLSLINGGTTAKIMVAAKDNFLGKYI 120

Query: 121 YKDTLARNLAAVIYRVRK 139
           YKDTLARNLAAVIYR  K
Sbjct: 121 YKDTLARNLAAVIYRDEK 138

[Close]

BLAST of Lag0040459 vs. NCBI nr
Match: XP_008444407.1 (PREDICTED: protein HHL1, chloroplastic [Cucumis melo])

HSP 1 Score: 244.6 bits (623), Expect = 7.6e-61
Identity = 122/138 (88.41%), Postives = 129/138 (93.48%), Query Frame = 0


Query: 1   MEVAMSLNALVRLPLSNSKLHEDGLVRHSLFSARTIQKPDQRHRQAFLVEAKGKRGMQSR 60
           M+VAMSLNALVRLPLSNSKLHEDGLVRHSLFSART+ KP+  +R+AF+VEAKGK+GMQSR
Sbjct: 1   MDVAMSLNALVRLPLSNSKLHEDGLVRHSLFSARTMHKPEHTYRRAFVVEAKGKKGMQSR 60

Query: 61  QVQRASPPPLPKIEDDGNPKFVIFIRMANVYLWYPLSLINGGTTAKIMVAAKDNFLGKYI 120
             QR  PPPLPKIEDDGNPKFVIFIRMANVYLWYPLSLINGGTTAKIMVAAKDNFLGKYI
Sbjct: 61  LSQRPGPPPLPKIEDDGNPKFVIFIRMANVYLWYPLSLINGGTTAKIMVAAKDNFLGKYI 120

Query: 121 YKDTLARNLAAVIYRVRK 139
           YKDTLARNLAAVIYR  K
Sbjct: 121 YKDTLARNLAAVIYRDEK 138

[Close]

BLAST of Lag0040459 vs. NCBI nr
Match: KAA0061035.1 (protein HHL1 [Cucumis melo var. makuwa])

HSP 1 Score: 244.6 bits (623), Expect = 7.6e-61
Identity = 122/138 (88.41%), Postives = 129/138 (93.48%), Query Frame = 0


Query: 1   MEVAMSLNALVRLPLSNSKLHEDGLVRHSLFSARTIQKPDQRHRQAFLVEAKGKRGMQSR 60
           M+VAMSLNALVRLPLSNSKLHEDGLVRHSLFSART+ KP+  +R+AF+VEAKGK+GMQSR
Sbjct: 1   MDVAMSLNALVRLPLSNSKLHEDGLVRHSLFSARTMHKPEHTYRRAFVVEAKGKKGMQSR 60

Query: 61  QVQRASPPPLPKIEDDGNPKFVIFIRMANVYLWYPLSLINGGTTAKIMVAAKDNFLGKYI 120
             QR  PPPLPKIEDDGNPKFVIFIRMANVYLWYPLSLINGGTTAKIMVAAKDNFLGKYI
Sbjct: 61  LSQRPGPPPLPKIEDDGNPKFVIFIRMANVYLWYPLSLINGGTTAKIMVAAKDNFLGKYI 120

Query: 121 YKDTLARNLAAVIYRVRK 139
           YKDTLARNLAAVIYR  K
Sbjct: 121 YKDTLARNLAAVIYRDEK 138

[Close]

BLAST of Lag0040459 vs. NCBI nr
Match: XP_022131326.1 (protein HHL1, chloroplastic isoform X2 [Momordica charantia])

HSP 1 Score: 243.0 bits (619), Expect = 2.2e-60
Identity = 123/140 (87.86%), Postives = 130/140 (92.86%), Query Frame = 0


Query: 1   MEVAMSLNALVRLPLSNSKLHEDGLVRHSLFSARTIQKPDQRHR--QAFLVEAKGKRGMQ 60
           MEVAMSLNALVRLPLSNS+L +DGLVRHSL SART QKP+QRHR    F+VEAKGK+GMQ
Sbjct: 1   MEVAMSLNALVRLPLSNSRLQDDGLVRHSLLSARTTQKPEQRHRHGHTFVVEAKGKKGMQ 60

Query: 61  SRQVQRASPPPLPKIEDDGNPKFVIFIRMANVYLWYPLSLINGGTTAKIMVAAKDNFLGK 120
           +RQ QRA+PPPLPKIEDDGNPKFVIFIRMANVYLWYPLSLINGGTTAKIMVAAKDNFLGK
Sbjct: 61  ARQFQRAAPPPLPKIEDDGNPKFVIFIRMANVYLWYPLSLINGGTTAKIMVAAKDNFLGK 120

Query: 121 YIYKDTLARNLAAVIYRVRK 139
           YIYKDTLARNLAAVIYR  K
Sbjct: 121 YIYKDTLARNLAAVIYRDEK 140

[Close]

BLAST of Lag0040459 vs. ExPASy Swiss-Prot
Match: Q8LDL0 (Protein HHL1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=HHL1 PE=1 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 1.4e-49
Identity = 103/141 (73.05%), Postives = 118/141 (83.69%), Query Frame = 0


Query: 1   MEVAMSLNALVRLPLSNS-KLHEDGLVRHSLFSARTI--QKPDQRHRQAFLVEAKGKRGM 60
           MEV+MSLNAL RLPL N+ +  E GL RHSLFS+RT   +   Q+ R  F+VEAKGK+GM
Sbjct: 1   MEVSMSLNALTRLPLKNTGRFEEVGLARHSLFSSRTACRETAVQQRRMVFVVEAKGKKGM 60

Query: 61  QSRQVQRASPPPLPKIEDDGNPKFVIFIRMANVYLWYPLSLINGGTTAKIMVAAKDNFLG 120
            +RQ QR +PPP+PKIEDDGNP+FVIFIRMANVYLWYPLS+I GGTTAKIMVAAKDN LG
Sbjct: 61  AARQYQR-TPPPMPKIEDDGNPRFVIFIRMANVYLWYPLSIIAGGTTAKIMVAAKDNLLG 120

Query: 121 KYIYKDTLARNLAAVIYRVRK 139
           KYIYKDT+ARN+AAVIYR  K
Sbjct: 121 KYIYKDTIARNIAAVIYRDEK 140

[Close]

BLAST of Lag0040459 vs. ExPASy TrEMBL
Match: A0A5A7V5E5 (Protein HHL1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G001710 PE=4 SV=1)

HSP 1 Score: 244.6 bits (623), Expect = 3.7e-61
Identity = 122/138 (88.41%), Postives = 129/138 (93.48%), Query Frame = 0


Query: 1   MEVAMSLNALVRLPLSNSKLHEDGLVRHSLFSARTIQKPDQRHRQAFLVEAKGKRGMQSR 60
           M+VAMSLNALVRLPLSNSKLHEDGLVRHSLFSART+ KP+  +R+AF+VEAKGK+GMQSR
Sbjct: 1   MDVAMSLNALVRLPLSNSKLHEDGLVRHSLFSARTMHKPEHTYRRAFVVEAKGKKGMQSR 60

Query: 61  QVQRASPPPLPKIEDDGNPKFVIFIRMANVYLWYPLSLINGGTTAKIMVAAKDNFLGKYI 120
             QR  PPPLPKIEDDGNPKFVIFIRMANVYLWYPLSLINGGTTAKIMVAAKDNFLGKYI
Sbjct: 61  LSQRPGPPPLPKIEDDGNPKFVIFIRMANVYLWYPLSLINGGTTAKIMVAAKDNFLGKYI 120

Query: 121 YKDTLARNLAAVIYRVRK 139
           YKDTLARNLAAVIYR  K
Sbjct: 121 YKDTLARNLAAVIYRDEK 138

[Close]

BLAST of Lag0040459 vs. ExPASy TrEMBL
Match: A0A1S3BA84 (protein HHL1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103487745 PE=4 SV=1)

HSP 1 Score: 244.6 bits (623), Expect = 3.7e-61
Identity = 122/138 (88.41%), Postives = 129/138 (93.48%), Query Frame = 0


Query: 1   MEVAMSLNALVRLPLSNSKLHEDGLVRHSLFSARTIQKPDQRHRQAFLVEAKGKRGMQSR 60
           M+VAMSLNALVRLPLSNSKLHEDGLVRHSLFSART+ KP+  +R+AF+VEAKGK+GMQSR
Sbjct: 1   MDVAMSLNALVRLPLSNSKLHEDGLVRHSLFSARTMHKPEHTYRRAFVVEAKGKKGMQSR 60

Query: 61  QVQRASPPPLPKIEDDGNPKFVIFIRMANVYLWYPLSLINGGTTAKIMVAAKDNFLGKYI 120
             QR  PPPLPKIEDDGNPKFVIFIRMANVYLWYPLSLINGGTTAKIMVAAKDNFLGKYI
Sbjct: 61  LSQRPGPPPLPKIEDDGNPKFVIFIRMANVYLWYPLSLINGGTTAKIMVAAKDNFLGKYI 120

Query: 121 YKDTLARNLAAVIYRVRK 139
           YKDTLARNLAAVIYR  K
Sbjct: 121 YKDTLARNLAAVIYRDEK 138

[Close]

BLAST of Lag0040459 vs. ExPASy TrEMBL
Match: A0A6J1BPD0 (protein HHL1, chloroplastic isoform X1 OS=Momordica charantia OX=3673 GN=LOC111004583 PE=4 SV=1)

HSP 1 Score: 243.0 bits (619), Expect = 1.1e-60
Identity = 123/140 (87.86%), Postives = 130/140 (92.86%), Query Frame = 0


Query: 1   MEVAMSLNALVRLPLSNSKLHEDGLVRHSLFSARTIQKPDQRHR--QAFLVEAKGKRGMQ 60
           MEVAMSLNALVRLPLSNS+L +DGLVRHSL SART QKP+QRHR    F+VEAKGK+GMQ
Sbjct: 1   MEVAMSLNALVRLPLSNSRLQDDGLVRHSLLSARTTQKPEQRHRHGHTFVVEAKGKKGMQ 60

Query: 61  SRQVQRASPPPLPKIEDDGNPKFVIFIRMANVYLWYPLSLINGGTTAKIMVAAKDNFLGK 120
           +RQ QRA+PPPLPKIEDDGNPKFVIFIRMANVYLWYPLSLINGGTTAKIMVAAKDNFLGK
Sbjct: 61  ARQFQRAAPPPLPKIEDDGNPKFVIFIRMANVYLWYPLSLINGGTTAKIMVAAKDNFLGK 120

Query: 121 YIYKDTLARNLAAVIYRVRK 139
           YIYKDTLARNLAAVIYR  K
Sbjct: 121 YIYKDTLARNLAAVIYRDEK 140

[Close]

BLAST of Lag0040459 vs. ExPASy TrEMBL
Match: A0A6J1BP87 (protein HHL1, chloroplastic isoform X2 OS=Momordica charantia OX=3673 GN=LOC111004583 PE=4 SV=1)

HSP 1 Score: 243.0 bits (619), Expect = 1.1e-60
Identity = 123/140 (87.86%), Postives = 130/140 (92.86%), Query Frame = 0


Query: 1   MEVAMSLNALVRLPLSNSKLHEDGLVRHSLFSARTIQKPDQRHR--QAFLVEAKGKRGMQ 60
           MEVAMSLNALVRLPLSNS+L +DGLVRHSL SART QKP+QRHR    F+VEAKGK+GMQ
Sbjct: 1   MEVAMSLNALVRLPLSNSRLQDDGLVRHSLLSARTTQKPEQRHRHGHTFVVEAKGKKGMQ 60

Query: 61  SRQVQRASPPPLPKIEDDGNPKFVIFIRMANVYLWYPLSLINGGTTAKIMVAAKDNFLGK 120
           +RQ QRA+PPPLPKIEDDGNPKFVIFIRMANVYLWYPLSLINGGTTAKIMVAAKDNFLGK
Sbjct: 61  ARQFQRAAPPPLPKIEDDGNPKFVIFIRMANVYLWYPLSLINGGTTAKIMVAAKDNFLGK 120

Query: 121 YIYKDTLARNLAAVIYRVRK 139
           YIYKDTLARNLAAVIYR  K
Sbjct: 121 YIYKDTLARNLAAVIYRDEK 140

[Close]

BLAST of Lag0040459 vs. ExPASy TrEMBL
Match: A0A6J1KDM2 (protein HHL1, chloroplastic-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111492298 PE=4 SV=1)

HSP 1 Score: 241.5 bits (615), Expect = 3.1e-60
Identity = 119/138 (86.23%), Postives = 130/138 (94.20%), Query Frame = 0


Query: 1   MEVAMSLNALVRLPLSNSKLHEDGLVRHSLFSARTIQKPDQRHRQAFLVEAKGKRGMQSR 60
           MEVAMSLNALVRLPLSNSKL EDG VRHSLFS+RT+QKP++RHR  F+VEAKGK+GMQ+R
Sbjct: 1   MEVAMSLNALVRLPLSNSKLAEDGRVRHSLFSSRTVQKPERRHRHTFVVEAKGKKGMQAR 60

Query: 61  QVQRASPPPLPKIEDDGNPKFVIFIRMANVYLWYPLSLINGGTTAKIMVAAKDNFLGKYI 120
           + Q+A+PPPLPKIEDDGNPKFVIFIR A+VYLWYPLSLINGGTTAKIMVAAKDNFLGKYI
Sbjct: 61  RFQKAAPPPLPKIEDDGNPKFVIFIRTADVYLWYPLSLINGGTTAKIMVAAKDNFLGKYI 120

Query: 121 YKDTLARNLAAVIYRVRK 139
           YKDTLARNLAAVIYR  K
Sbjct: 121 YKDTLARNLAAVIYRDEK 138

[Close]

BLAST of Lag0040459 vs. TAIR 10
Match: AT1G67700.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 49 Blast hits to 49 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). )

HSP 1 Score: 197.6 bits (501), Expect = 9.9e-51
Identity = 103/141 (73.05%), Postives = 118/141 (83.69%), Query Frame = 0


Query: 1   MEVAMSLNALVRLPLSNS-KLHEDGLVRHSLFSARTI--QKPDQRHRQAFLVEAKGKRGM 60
           MEV+MSLNAL RLPL N+ +  E GL RHSLFS+RT   +   Q+ R  F+VEAKGK+GM
Sbjct: 1   MEVSMSLNALTRLPLKNTGRFEEVGLARHSLFSSRTACRETAVQQRRMVFVVEAKGKKGM 60

Query: 61  QSRQVQRASPPPLPKIEDDGNPKFVIFIRMANVYLWYPLSLINGGTTAKIMVAAKDNFLG 120
            +RQ QR +PPP+PKIEDDGNP+FVIFIRMANVYLWYPLS+I GGTTAKIMVAAKDN LG
Sbjct: 61  AARQYQR-TPPPMPKIEDDGNPRFVIFIRMANVYLWYPLSIIAGGTTAKIMVAAKDNLLG 120

Query: 121 KYIYKDTLARNLAAVIYRVRK 139
           KYIYKDT+ARN+AAVIYR  K
Sbjct: 121 KYIYKDTIARNIAAVIYRDEK 140

[Close]

BLAST of Lag0040459 vs. TAIR 10
Match: AT1G67700.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 49 Blast hits to 49 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). )

HSP 1 Score: 197.6 bits (501), Expect = 9.9e-51
Identity = 103/141 (73.05%), Postives = 118/141 (83.69%), Query Frame = 0


Query: 1   MEVAMSLNALVRLPLSNS-KLHEDGLVRHSLFSARTI--QKPDQRHRQAFLVEAKGKRGM 60
           MEV+MSLNAL RLPL N+ +  E GL RHSLFS+RT   +   Q+ R  F+VEAKGK+GM
Sbjct: 1   MEVSMSLNALTRLPLKNTGRFEEVGLARHSLFSSRTACRETAVQQRRMVFVVEAKGKKGM 60

Query: 61  QSRQVQRASPPPLPKIEDDGNPKFVIFIRMANVYLWYPLSLINGGTTAKIMVAAKDNFLG 120
            +RQ QR +PPP+PKIEDDGNP+FVIFIRMANVYLWYPLS+I GGTTAKIMVAAKDN LG
Sbjct: 61  AARQYQR-TPPPMPKIEDDGNPRFVIFIRMANVYLWYPLSIIAGGTTAKIMVAAKDNLLG 120

Query: 121 KYIYKDTLARNLAAVIYRVRK 139
           KYIYKDT+ARN+AAVIYR  K
Sbjct: 121 KYIYKDTIARNIAAVIYRDEK 140

[Close]

BLAST of Lag0040459 vs. TAIR 10
Match: AT1G67700.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages. )

HSP 1 Score: 197.6 bits (501), Expect = 9.9e-51
Identity = 103/141 (73.05%), Postives = 118/141 (83.69%), Query Frame = 0


Query: 1   MEVAMSLNALVRLPLSNS-KLHEDGLVRHSLFSARTI--QKPDQRHRQAFLVEAKGKRGM 60
           MEV+MSLNAL RLPL N+ +  E GL RHSLFS+RT   +   Q+ R  F+VEAKGK+GM
Sbjct: 1   MEVSMSLNALTRLPLKNTGRFEEVGLARHSLFSSRTACRETAVQQRRMVFVVEAKGKKGM 60

Query: 61  QSRQVQRASPPPLPKIEDDGNPKFVIFIRMANVYLWYPLSLINGGTTAKIMVAAKDNFLG 120
            +RQ QR +PPP+PKIEDDGNP+FVIFIRMANVYLWYPLS+I GGTTAKIMVAAKDN LG
Sbjct: 61  AARQYQR-TPPPMPKIEDDGNPRFVIFIRMANVYLWYPLSIIAGGTTAKIMVAAKDNLLG 120

Query: 121 KYIYKDTLARNLAAVIYRVRK 139
           KYIYKDT+ARN+AAVIYR  K
Sbjct: 121 KYIYKDTIARNIAAVIYRDEK 140

The following BLAST results are available for this feature:

BLAST of Lag0040459 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038884174.1	6.9e-62	89.13	protein HHL1, chloroplastic isoform X1 [Benincasa hispida]	[more]
XP_038884175.1	6.9e-62	89.13	protein HHL1, chloroplastic isoform X2 [Benincasa hispida]	[more]
XP_008444407.1	7.6e-61	88.41	PREDICTED: protein HHL1, chloroplastic [Cucumis melo]	[more]
KAA0061035.1	7.6e-61	88.41	protein HHL1 [Cucumis melo var. makuwa]	[more]
XP_022131326.1	2.2e-60	87.86	protein HHL1, chloroplastic isoform X2 [Momordica charantia]	[more]

BLAST of Lag0040459 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LDL0	1.4e-49	73.05	Protein HHL1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=HHL1 PE=1 SV=1	[more]

BLAST of Lag0040459 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V5E5	3.7e-61	88.41	Protein HHL1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G001710 ...	[more]
A0A1S3BA84	3.7e-61	88.41	protein HHL1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103487745 PE=4 SV=1	[more]
A0A6J1BPD0	1.1e-60	87.86	protein HHL1, chloroplastic isoform X1 OS=Momordica charantia OX=3673 GN=LOC1110...	[more]
A0A6J1BP87	1.1e-60	87.86	protein HHL1, chloroplastic isoform X2 OS=Momordica charantia OX=3673 GN=LOC1110...	[more]
A0A6J1KDM2	3.1e-60	86.23	protein HHL1, chloroplastic-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]

BLAST of Lag0040459 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G67700.1	9.9e-51	73.05	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G67700.2	9.9e-51	73.05	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G67700.3	9.9e-51	73.05	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 131..159
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 140..207
None	No IPR available	PANTHER	PTHR48191	PROTEIN HHL1 CHLOROPLASTIC	coord: 1..146

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0040459.1	Lag0040459.1	mRNA