Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exon CDS polypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCGTTTGAGTTGTTTCCGGCCTGTCGGAGCACGGACAGAGGCAAAAGAAAGCGGGGAGACGACGCCGATCACGACACCGCCGGCGCCGGAAACCAGAAGGATTTGGTGGCGGATGGGGGAAAAGAGGCGGAAACGGCGACGGATGAAGAGGTGGAGGAGTTCATCGCCATTCTCAAGCGATTACACGCGGCGACCAAATACATAAAGAAGATCGACGGTGCAAGCCGTCTGTTGATGGGAAAGAGATCGAAGCCGACAAAGTCGAGCGAGGAAGAAGCCGATGAAGCTGAAATAAGGGAAGAGAGAATTCCAGAGCACAAATTGGACAGAAATTTGGATCTGGATCTGAACTTAGAACCTGCGTCCGTTGAACCGGATGGTAAAGAGAGGAGAAGCCGGAGCCAGAATCCGAAGCCGTCGTCCGGCAATTCGGCCGCCGATTCTCGTCGGAATTAG mRNA sequence
ATGCCGTTTGAGTTGTTTCCGGCCTGTCGGAGCACGGACAGAGGCAAAAGAAAGCGGGGAGACGACGCCGATCACGACACCGCCGGCGCCGGAAACCAGAAGGATTTGGTGGCGGATGGGGGAAAAGAGGCGGAAACGGCGACGGATGAAGAGGTGGAGGAGTTCATCGCCATTCTCAAGCGATTACACGCGGCGACCAAATACATAAAGAAGATCGACGGTGCAAGCCGTCTGTTGATGGGAAAGAGATCGAAGCCGACAAAGTCGAGCGAGGAAGAAGCCGATGAAGCTGAAATAAGGGAAGAGAGAATTCCAGAGCACAAATTGGACAGAAATTTGGATCTGGATCTGAACTTAGAACCTGCGTCCGTTGAACCGGATGGTAAAGAGAGGAGAAGCCGGAGCCAGAATCCGAAGCCGTCGTCCGGCAATTCGGCCGCCGATTCTCGTCGGAATTAG Coding sequence (CDS)
ATGCCGTTTGAGTTGTTTCCGGCCTGTCGGAGCACGGACAGAGGCAAAAGAAAGCGGGGAGACGACGCCGATCACGACACCGCCGGCGCCGGAAACCAGAAGGATTTGGTGGCGGATGGGGGAAAAGAGGCGGAAACGGCGACGGATGAAGAGGTGGAGGAGTTCATCGCCATTCTCAAGCGATTACACGCGGCGACCAAATACATAAAGAAGATCGACGGTGCAAGCCGTCTGTTGATGGGAAAGAGATCGAAGCCGACAAAGTCGAGCGAGGAAGAAGCCGATGAAGCTGAAATAAGGGAAGAGAGAATTCCAGAGCACAAATTGGACAGAAATTTGGATCTGGATCTGAACTTAGAACCTGCGTCCGTTGAACCGGATGGTAAAGAGAGGAGAAGCCGGAGCCAGAATCCGAAGCCGTCGTCCGGCAATTCGGCCGCCGATTCTCGTCGGAATTAG Protein sequence
MPFELFPACRSTDRGKRKRGDDADHDTAGAGNQKDLVADGGKEAETATDEEVEEFIAILKRLHAATKYIKKIDGASRLLMGKRSKPTKSSEEEADEAEIREERIPEHKLDRNLDLDLNLEPASVEPDGKERRSRSQNPKPSSGNSAADSRRN
Homology
BLAST of Lag0040284 vs. NCBI nr
Match:
XP_038892789.1 (protein NIM1-INTERACTING 2 [Benincasa hispida])
HSP 1 Score: 205.7 bits (522), Expect = 2.9e-49
Identity = 119/151 (78.81%), Postives = 128/151 (84.77%), Query Frame = 0
Query: 1 MPFELFPACRSTDRGKRKRGDDADHDTAGAGNQKDLVADGGKEAETATDEEVEEFIAILK 60 MPFELFPA RSTDRGKRKR DD AG G+Q+D VAD GKEAETATDEEVEEF +ILK Sbjct: 1 MPFELFPASRSTDRGKRKREDD-----AGTGSQRDAVADRGKEAETATDEEVEEFFSILK 60 Query: 61 RLHAATKYIKKIDGASRLLMGKRSKPTKSSEEEADEAEIREERIPEHKLDRNLDLDLNLE 120 RLHAATKYI+KIDGASRLLMGKRSKPTKSSEEEADE EIR E+IP+HKLDRNLDLDLNLE Sbjct: 61 RLHAATKYIEKIDGASRLLMGKRSKPTKSSEEEADEVEIRAEKIPDHKLDRNLDLDLNLE 120 Query: 121 PASVEPDGKERRSRSQNPKPSSGNSAADSRR 152 PA VE D ++ SRSQN K S +SAADS R Sbjct: 121 PACVESD--DKTSRSQNLKTSCADSAADSCR 144
BLAST of Lag0040284 vs. NCBI nr
Match:
XP_008446591.1 (PREDICTED: protein NIM1-INTERACTING 2 [Cucumis melo] >KAA0034549.1 protein NIM1-INTERACTING 2 [Cucumis melo var. makuwa] >TYK09103.1 protein NIM1-INTERACTING 2 [Cucumis melo var. makuwa])
HSP 1 Score: 191.4 bits (485), Expect = 5.6e-45
Identity = 114/151 (75.50%), Postives = 121/151 (80.13%), Query Frame = 0
Query: 1 MPFELFPACRSTDRGKRKRGDDADHDTAGAGNQKDLVADGGKEAETATDEEVEEFIAILK 60 MPFELFP RSTDRGKRKRGDD AGAGNQKD+V GKEAETATDEEVEEF +ILK Sbjct: 1 MPFELFPGSRSTDRGKRKRGDD-----AGAGNQKDVVTKEGKEAETATDEEVEEFFSILK 60 Query: 61 RLHAATKYIKKIDGASRLLMGKRSKPTKSSEEEADEAEIREERIPEHKLDRNLDLDLNLE 120 RLHAATKYI+KIDGAS LLMGKRSK KS+EEE DE IR ERIPE KLDRNLDLDLNLE Sbjct: 61 RLHAATKYIEKIDGASHLLMGKRSKRMKSNEEERDEVGIRVERIPEQKLDRNLDLDLNLE 120 Query: 121 PASVEPDGKERRSRSQNPKPSSGNSAADSRR 152 P VE +GK R +SQN KPS +SAA S R Sbjct: 121 PVCVESEGKSR--QSQNLKPSCVDSAAVSCR 144
BLAST of Lag0040284 vs. NCBI nr
Match:
KGN52074.1 (hypothetical protein Csa_008594 [Cucumis sativus])
HSP 1 Score: 191.4 bits (485), Expect = 5.6e-45
Identity = 111/151 (73.51%), Postives = 121/151 (80.13%), Query Frame = 0
Query: 1 MPFELFPACRSTDRGKRKRGDDADHDTAGAGNQKDLVADGGKEAETATDEEVEEFIAILK 60 MPFELFPA RST+RGKRKRGDD AG GNQKD+ A+ G+EAETATDEEVEEF +ILK Sbjct: 1 MPFELFPASRSTERGKRKRGDD-----AGVGNQKDVGAEEGREAETATDEEVEEFFSILK 60 Query: 61 RLHAATKYIKKIDGASRLLMGKRSKPTKSSEEEADEAEIREERIPEHKLDRNLDLDLNLE 120 RLHAATKYI+KIDGAS LLMGKR KP KS+EEE DE I+ ERIPE KLDRNLDLDLNLE Sbjct: 61 RLHAATKYIEKIDGASHLLMGKRPKPMKSNEEEGDEVGIKAERIPEQKLDRNLDLDLNLE 120 Query: 121 PASVEPDGKERRSRSQNPKPSSGNSAADSRR 152 P VE +GK R QN KPS +SAADS R Sbjct: 121 PVCVESEGKSR--ERQNRKPSCVDSAADSCR 144
BLAST of Lag0040284 vs. NCBI nr
Match:
XP_023542001.1 (uncharacterized protein LOC111801981 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 184.5 bits (467), Expect = 6.8e-43
Identity = 109/154 (70.78%), Postives = 123/154 (79.87%), Query Frame = 0
Query: 1 MPFELFPACRSTDRGKRK--RGDDADHD-TAGAGNQKDLVADGGKEAETATDEEVEEFIA 60 MPFELFP+ R TDRGKRK RG+ AD+D A AGNQK+ VA+ G E E +DEEVEEF A Sbjct: 1 MPFELFPSSR-TDRGKRKRERGEHADYDAAAAAGNQKETVAERGNEREMTSDEEVEEFFA 60 Query: 61 ILKRLHAATKYIKKIDGASRLLMGKRSKPTKSSEEEADEAEIREERIPEHKLDRNLDLDL 120 ILKRLHAATKYI+KIDGA LLMGKR+K K+SE+E D EIR +RIP+ KLDRNLDLDL Sbjct: 61 ILKRLHAATKYIEKIDGARSLLMGKRAKTAKASEKEGDGVEIRTKRIPDQKLDRNLDLDL 120 Query: 121 NLEPASVEPDGKERRSRSQNPKPSSGNSAADSRR 152 NLEP VE DGKERRSRS N K +G+SAADSRR Sbjct: 121 NLEPTCVESDGKERRSRSHNLKSLTGDSAADSRR 153
BLAST of Lag0040284 vs. NCBI nr
Match:
KAG6573971.1 (hypothetical protein SDJN03_27858, partial [Cucurbita argyrosperma subsp. sororia] >KAG7013028.1 hypothetical protein SDJN02_25784, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 181.4 bits (459), Expect = 5.8e-42
Identity = 111/156 (71.15%), Postives = 124/156 (79.49%), Query Frame = 0
Query: 1 MPFELFPACRSTDRGKRK--RGDDADHD-TAGAGNQKDLVADGGKEAETATDEEVEEFIA 60 MPFELFP+ R TDRGKRK RG+ AD+D A AGNQK+ VA+ G E E +DEEVEEF A Sbjct: 1 MPFELFPSSR-TDRGKRKRERGEHADYDAAAAAGNQKETVAERGNEREMTSDEEVEEFFA 60 Query: 61 ILKRLHAATKYIKKIDGASRLLMGKRSKPTKSSEEEADEAEIREERIPEHKLDRN--LDL 120 ILKRLHAATKYI+KIDGA LLMGKR+K K+SE+E D EIR +RIPE KLDRN LDL Sbjct: 61 ILKRLHAATKYIEKIDGARSLLMGKRAKTAKASEKEGDGVEIRTKRIPEQKLDRNLDLDL 120 Query: 121 DLNLEPASVEPDGKERRSRSQNPKPSSGNSAADSRR 152 DLNLEPASVE DGKERRSRS N K + +SAADSRR Sbjct: 121 DLNLEPASVESDGKERRSRSHNLKSLTDDSAADSRR 155
The following BLAST results are available for this feature:
Match Name E-value Identity Description
XP_038892789.1 2.9e-49 78.81 protein NIM1-INTERACTING 2 [Benincasa hispida] [more]
XP_008446591.1 5.6e-45 75.50 PREDICTED: protein NIM1-INTERACTING 2 [Cucumis melo] >KAA0034549.1 protein NIM1-... [more]
KGN52074.1 5.6e-45 73.51 hypothetical protein Csa_008594 [Cucumis sativus] [more]
XP_023542001.1 6.8e-43 70.78 uncharacterized protein LOC111801981 [Cucurbita pepo subsp. pepo] [more]
KAG6573971.1 5.8e-42 71.15 hypothetical protein SDJN03_27858, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match Name E-value Identity Description
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
A T G C C G T T T G A G T T G T T T C C G G C C T G T C G G A G C A C G G A C A G A G G C A A A A G A A A G C G G G G A G A C G A C G C C G A T C A C G A C A C C G C C G G C G C C G G A A A C C A G A A G G A T T T G G T G G C G G A T G G G G G A A A A G A G G C G G A A A C G G C G A C G G A T G A A G A G G T G G A G G A G T T C A T C G C C A T T C T C A A G C G A T T A C A C G C G G C G A C C A A A T A C A T A A A G A A G A T C G A C G G T G C A A G C C G T C T G T T G A T G G G A A A G A G A T C G A A G C C G A C A A A G T C G A G C G A G G A A G A A G C C G A T G A A G C T G A A A T A A G G G A A G A G A G A A T T C C A G A G C A C A A A T T G G A C A G A A A T T T G G A T C T G G A T C T G A A C T T A G A A C C T G C G T C C G T T G A A C C G G A T G G T A A A G A G A G G A G A A G C C G G A G C C A G A A T C C G A A G C C G T C G T C C G G C A A T T C G G C C G C C G A T T C T C G T C G G A A T T A G 50 100 150 200 250 300 350 400 450 Score = Score = Score = Score = Score = Score = Score = Sequence mobidb-lite mobidb-lite mobidb-lite mobidb-lite mobidb-lite PTHR35735:SF8 PTHR35735
IPR Term IPR Description Source Source Term Source Description Alignment
None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 84..115
None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 10..29
None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 137..152
None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 73..152
None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 1..47
None No IPR available PANTHER PTHR35735:SF8 PROTEIN NIM1-INTERACTING 2 coord: 14..123
IPR034577 Protein NIM1-INTERACTING 2 PANTHER PTHR35735 PROTEIN NIM1-INTERACTING 2 coord: 14..123
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category
Term Accession
Term Name
biological_process
GO:0010112
regulation of systemic acquired resistance