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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGGAGAATCAAATCTCCAAGAAGCGGGATCGGGACGACTCGTCCGAGTTGGCTGAGTCGGAAACCGGTTCGCCCGAGGTGAAGCGACTCAGAGACGACCTTCTTCTAGGTTTCTTCGACGAGTCCGATCCTGAACCGGCGACTCAGGATCTCGACTCGCTGATGAGGAGTTTCGAGGAAGAAATCGCCACCGCGTCCTCGTCTCCGGCGCCGATGGTGGATTTGACGGCGGATTCCGGCGAGTCTCAGCCGGAGTTAGGTTATCTCTTGGAAGCCTCCGACGACGAGCTCGGTCTGCCGCCTTCTGTTACTTCGATTAGCCAACAGGAGTTGGACGAATCGGCCGAGTTTGCGAGAGTTTCGACTGATTCGTCTGAAATCGGTGAGATGTGGAGGTTTGAGGATCAGATCCCGAACTACGACGCCTTCGAATTGGAAGGCGGAGATGTGTACAGCGGCAGCGATACGGCGGAGTACGTGGCGTTGGATGGACTGTTTGAGTATTCGAATCTGTGTTACGATGCGTCGGAGAACTCGGATTTTCTTTGGCGACAAGAATCTCTGCCGGCGCAGTAG mRNA sequence ATGGAGAATCAAATCTCCAAGAAGCGGGATCGGGACGACTCGTCCGAGTTGGCTGAGTCGGAAACCGGTTCGCCCGAGGTGAAGCGACTCAGAGACGACCTTCTTCTAGGTTTCTTCGACGAGTCCGATCCTGAACCGGCGACTCAGGATCTCGACTCGCTGATGAGGAGTTTCGAGGAAGAAATCGCCACCGCGTCCTCGTCTCCGGCGCCGATGGTGGATTTGACGGCGGATTCCGGCGAGTCTCAGCCGGAGTTAGGTTATCTCTTGGAAGCCTCCGACGACGAGCTCGGTCTGCCGCCTTCTGTTACTTCGATTAGCCAACAGGAGTTGGACGAATCGGCCGAGTTTGCGAGAGTTTCGACTGATTCGTCTGAAATCGGTGAGATGTGGAGGTTTGAGGATCAGATCCCGAACTACGACGCCTTCGAATTGGAAGGCGGAGATGTGTACAGCGGCAGCGATACGGCGGAGTACGTGGCGTTGGATGGACTGTTTGAGTATTCGAATCTGTGTTACGATGCGTCGGAGAACTCGGATTTTCTTTGGCGACAAGAATCTCTGCCGGCGCAGTAG Coding sequence (CDS) ATGGAGAATCAAATCTCCAAGAAGCGGGATCGGGACGACTCGTCCGAGTTGGCTGAGTCGGAAACCGGTTCGCCCGAGGTGAAGCGACTCAGAGACGACCTTCTTCTAGGTTTCTTCGACGAGTCCGATCCTGAACCGGCGACTCAGGATCTCGACTCGCTGATGAGGAGTTTCGAGGAAGAAATCGCCACCGCGTCCTCGTCTCCGGCGCCGATGGTGGATTTGACGGCGGATTCCGGCGAGTCTCAGCCGGAGTTAGGTTATCTCTTGGAAGCCTCCGACGACGAGCTCGGTCTGCCGCCTTCTGTTACTTCGATTAGCCAACAGGAGTTGGACGAATCGGCCGAGTTTGCGAGAGTTTCGACTGATTCGTCTGAAATCGGTGAGATGTGGAGGTTTGAGGATCAGATCCCGAACTACGACGCCTTCGAATTGGAAGGCGGAGATGTGTACAGCGGCAGCGATACGGCGGAGTACGTGGCGTTGGATGGACTGTTTGAGTATTCGAATCTGTGTTACGATGCGTCGGAGAACTCGGATTTTCTTTGGCGACAAGAATCTCTGCCGGCGCAGTAG Protein sequence MENQISKKRDRDDSSELAESETGSPEVKRLRDDLLLGFFDESDPEPATQDLDSLMRSFEEEIATASSSPAPMVDLTADSGESQPELGYLLEASDDELGLPPSVTSISQQELDESAEFARVSTDSSEIGEMWRFEDQIPNYDAFELEGGDVYSGSDTAEYVALDGLFEYSNLCYDASENSDFLWRQESLPAQ
Homology
BLAST of Lag0040283 vs. NCBI nr
Match: XP_022967994.1 (uncharacterized protein LOC111467364 [Cucurbita maxima]) HSP 1 Score: 337.0 bits (863), Expect = 1.0e-88 Identity = 174/191 (91.10%), Postives = 181/191 (94.76%), Query Frame = 0
Query: 1 MENQISKKRDRDDSSELAESETGSPEVKRLRDDLLLGFFDESDPEPATQDLDSLMRSFEE 60
MENQISKKRDRDDS+E ESE GSPEVKRLRDD LLGFFDESDPEPATQ+LDSLMRSFEE
Sbjct: 1 MENQISKKRDRDDSAEFTESENGSPEVKRLRDD-LLGFFDESDPEPATQELDSLMRSFEE 60
Query: 61 EIATASSSPAPMVDLTADSGESQPELGYLLEASDDELGLPPSVTSISQQELDESAEFARV 120
EIATASSSPAP+VDLT +SGESQPELGYLLEASDDELGLPPSVTSIS++E DESA FARV
Sbjct: 61 EIATASSSPAPVVDLTVESGESQPELGYLLEASDDELGLPPSVTSISKEEFDESAVFARV 120
Query: 121 STDSSEIGEMWRFEDQIPNYDAFELEGGDVYSGSDTAEYVALDGLFEYSNLCYDASENSD 180
STDS E+GEMWRFEDQIPNYDAFELEGGDVYSGSDTAEYVA DGLFEYSNLC DASENSD
Sbjct: 121 STDSLEVGEMWRFEDQIPNYDAFELEGGDVYSGSDTAEYVAFDGLFEYSNLCLDASENSD 180
Query: 181 FLWRQESLPAQ 192
FLWRQESLPAQ
Sbjct: 181 FLWRQESLPAQ 190
BLAST of Lag0040283 vs. NCBI nr
Match: KAG7013029.1 (hypothetical protein SDJN02_25785, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 337.0 bits (863), Expect = 1.0e-88 Identity = 174/191 (91.10%), Postives = 180/191 (94.24%), Query Frame = 0
Query: 1 MENQISKKRDRDDSSELAESETGSPEVKRLRDDLLLGFFDESDPEPATQDLDSLMRSFEE 60
MENQISKKRDRDDS+E ESE GSPEVKRLRDD LLGFFDESDPEPATQDLDSLMRSFEE
Sbjct: 1 MENQISKKRDRDDSAEFTESENGSPEVKRLRDD-LLGFFDESDPEPATQDLDSLMRSFEE 60
Query: 61 EIATASSSPAPMVDLTADSGESQPELGYLLEASDDELGLPPSVTSISQQELDESAEFARV 120
EIATASSSP P+VDLT DSGESQPELGYLLEASDDELGLPPSVTSIS++E DESA FARV
Sbjct: 61 EIATASSSPVPVVDLTVDSGESQPELGYLLEASDDELGLPPSVTSISKEEFDESAVFARV 120
Query: 121 STDSSEIGEMWRFEDQIPNYDAFELEGGDVYSGSDTAEYVALDGLFEYSNLCYDASENSD 180
S+DS E+GEMWRFEDQIPNYDAFELEGGDVYSGSDTAEYVA DGLFEYSNLC DASENSD
Sbjct: 121 SSDSLEVGEMWRFEDQIPNYDAFELEGGDVYSGSDTAEYVAFDGLFEYSNLCLDASENSD 180
Query: 181 FLWRQESLPAQ 192
FLWRQESLPAQ
Sbjct: 181 FLWRQESLPAQ 190
BLAST of Lag0040283 vs. NCBI nr
Match: KAG6573972.1 (hypothetical protein SDJN03_27859, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 336.3 bits (861), Expect = 1.8e-88 Identity = 174/191 (91.10%), Postives = 179/191 (93.72%), Query Frame = 0
Query: 1 MENQISKKRDRDDSSELAESETGSPEVKRLRDDLLLGFFDESDPEPATQDLDSLMRSFEE 60
MENQISKKRDRDDS+E ESE GSPEVKRLRDD LLGFFDESDPEPATQDLDSLMRSFEE
Sbjct: 1 MENQISKKRDRDDSAEFTESENGSPEVKRLRDD-LLGFFDESDPEPATQDLDSLMRSFEE 60
Query: 61 EIATASSSPAPMVDLTADSGESQPELGYLLEASDDELGLPPSVTSISQQELDESAEFARV 120
EIATASSSP P+VDLT DSGESQPELGYLLEASDDELGLPPSVTSIS++E DESA FARV
Sbjct: 61 EIATASSSPVPVVDLTVDSGESQPELGYLLEASDDELGLPPSVTSISKEEFDESAVFARV 120
Query: 121 STDSSEIGEMWRFEDQIPNYDAFELEGGDVYSGSDTAEYVALDGLFEYSNLCYDASENSD 180
S DS E+GEMWRFEDQIPNYDAFELEGGDVYSGSDTAEYVA DGLFEYSNLC DASENSD
Sbjct: 121 SCDSLEVGEMWRFEDQIPNYDAFELEGGDVYSGSDTAEYVAFDGLFEYSNLCLDASENSD 180
Query: 181 FLWRQESLPAQ 192
FLWRQESLPAQ
Sbjct: 181 FLWRQESLPAQ 190
BLAST of Lag0040283 vs. NCBI nr
Match: XP_023542043.1 (uncharacterized protein LOC111802016 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 334.7 bits (857), Expect = 5.1e-88 Identity = 173/191 (90.58%), Postives = 179/191 (93.72%), Query Frame = 0
Query: 1 MENQISKKRDRDDSSELAESETGSPEVKRLRDDLLLGFFDESDPEPATQDLDSLMRSFEE 60
MENQISKKRDRDDS+E ESE GSPEVKRLRDD LLGFFDESDPEPATQDLDSLMRSFEE
Sbjct: 1 MENQISKKRDRDDSAEFTESENGSPEVKRLRDD-LLGFFDESDPEPATQDLDSLMRSFEE 60
Query: 61 EIATASSSPAPMVDLTADSGESQPELGYLLEASDDELGLPPSVTSISQQELDESAEFARV 120
EIATASSSP P+VDLT DSGESQPELGYLLEASDDELGLPPSVTSIS++E DESA FARV
Sbjct: 61 EIATASSSPVPVVDLTVDSGESQPELGYLLEASDDELGLPPSVTSISKEEFDESAVFARV 120
Query: 121 STDSSEIGEMWRFEDQIPNYDAFELEGGDVYSGSDTAEYVALDGLFEYSNLCYDASENSD 180
S+DS E+GEMWRFEDQIPNYDAFELEGGDVYSGSDTA YVA DGLFEYSNLC DASENSD
Sbjct: 121 SSDSLEVGEMWRFEDQIPNYDAFELEGGDVYSGSDTAAYVAFDGLFEYSNLCLDASENSD 180
Query: 181 FLWRQESLPAQ 192
FLWRQESLPAQ
Sbjct: 181 FLWRQESLPAQ 190
BLAST of Lag0040283 vs. NCBI nr
Match: XP_022945766.1 (uncharacterized protein LOC111449910 [Cucurbita moschata]) HSP 1 Score: 334.0 bits (855), Expect = 8.8e-88 Identity = 173/191 (90.58%), Postives = 179/191 (93.72%), Query Frame = 0
Query: 1 MENQISKKRDRDDSSELAESETGSPEVKRLRDDLLLGFFDESDPEPATQDLDSLMRSFEE 60
MENQISKKRDRDDS+E ESE GS EVKRLRDD LLGFFDESDPEPATQDLDSLMRSFEE
Sbjct: 1 MENQISKKRDRDDSAEFTESENGSSEVKRLRDD-LLGFFDESDPEPATQDLDSLMRSFEE 60
Query: 61 EIATASSSPAPMVDLTADSGESQPELGYLLEASDDELGLPPSVTSISQQELDESAEFARV 120
EIATASSSP P+VDLT DSGESQPELGYLLEASDDELGLPPSVTSIS++E DESA FARV
Sbjct: 61 EIATASSSPVPVVDLTVDSGESQPELGYLLEASDDELGLPPSVTSISKEEFDESAVFARV 120
Query: 121 STDSSEIGEMWRFEDQIPNYDAFELEGGDVYSGSDTAEYVALDGLFEYSNLCYDASENSD 180
S+DS E+GEMWRFEDQIPNYDAFELEGGDVYSGSDTAEYVA DGLFEYSNLC DASENSD
Sbjct: 121 SSDSLEVGEMWRFEDQIPNYDAFELEGGDVYSGSDTAEYVAFDGLFEYSNLCLDASENSD 180
Query: 181 FLWRQESLPAQ 192
FLWRQESLPAQ
Sbjct: 181 FLWRQESLPAQ 190
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| XP_022967994.1 | 1.0e-88 | 91.10 | uncharacterized protein LOC111467364 [Cucurbita maxima] | [more] |
| KAG7013029.1 | 1.0e-88 | 91.10 | hypothetical protein SDJN02_25785, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
| KAG6573972.1 | 1.8e-88 | 91.10 | hypothetical protein SDJN03_27859, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
| XP_023542043.1 | 5.1e-88 | 90.58 | uncharacterized protein LOC111802016 [Cucurbita pepo subsp. pepo] | [more] |
| XP_022945766.1 | 8.8e-88 | 90.58 | uncharacterized protein LOC111449910 [Cucurbita moschata] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1..29 |
| None | No IPR available | PANTHER | PTHR34539 | T6J4.11 PROTEIN | coord: 3..191 |
| None | No IPR available | PANTHER | PTHR34539:SF19 | T6J4.11 PROTEIN | coord: 3..191 |
Relationships
The following mRNA feature(s) are a part of this gene:
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