Lag0040135 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0040135
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
Description50S ribosomal protein L32, chloroplastic
Locationchr13: 2414445 .. 2418624 (+)
RNA-Seq ExpressionLag0040135
SyntenyLag0040135
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGTTGAGGATTATGAGGGCGCTCGAGGGTCAGACGGGTTCGATGCTAGGGCTTAAAGCGATGGCTAATGTTTTACCTCAATCCTCGCCGTTATCTGGGATCATGGACCGTAAGGATTCCACGCCGCCGCTTGTTCTCCCGGAGTTTAACCATGAGTCTGACAGGGACAGGATCAAAAACTGCAGTATTGTGGGATTTGGTTTCCCTAGTTTATCTTTTTCCGGGTCCATGGAGCTCATGGCTGTTCCTAAGAGGAAGGTATTGAATTTCCTCCTCCTATTTTCATTTAATCAATCGCGGAGAAGTTCCTTGTCTTAGAATAGAAACTTAAACTATTTGATTCTTGGGGAAAAAGTAGAAACTTAAAATTCCACATTGCTTGAATTCGTGGATATGAAAGATGTTATTGGAAGTGTTACAAATGGAACCGAATAGTTTAGGAAGAATTGGCAGTAGCACTTTTGATGTTGAATTCTTCTGGATATTTTAGATAGGGCTATGAGAGAATTTTTTAGGTCTGTTTTATAACAATTTCGTTTTTAGTTTTCTGTTTGTGAGAATTGTGTTTGTTTCCTCACAATATCTCCACTATGGTTTTCACATCTCTAAGGAATATTTGAATTTTTAACCAAGTCGAAAAACAAGAACAAGTTTTAAAAAACTACTTCTTTACTTTTAGATCTTGAAACCATTTTTAGAAAGTAGATAACAAAAGAAAGAAACTTACCTGGAAGTAGTATCGACTAGCTTAATATTCACAAATCAAATGGGCCTTAGAACATTTTTGTTATGTTCTTTGGTCAATGCGTTTGATATCATATGGTACTTGGTAGTAGTGACTGTTTCTCTTTCAATGCAATAAGCACTGTGAAGCTTGTTTGGTTTTAGAGTTCTTAGATTTTTTATTGGACTTGACATTCTTATGACTCGACAATGTCGTTGTCTGAATGCATGATACTCTTTATATGTATGTTTGAGACATTCCCTTAGGACTCTGCTAGGTTTCCAAAGTTCCTATTCTAAAACTTGGTCTTGCTCGGATTTATTGGAAATTTTGAGAAAAACAATTCATAGTCTTTGTTTTGCAGGTTTCTCCACATAAAAGGGGCATAAGAAATGGCCCAAAGGCTCTGAAACCTATCCCAGTTATAATTCGATGCAAGTAAGATTCTCCTCACTCTGTCCTAACAAATTATTATTTATTTTTTAAATTGTGATATTGAAACATGATCAATCTAGTAATTGCATACATTATTGTAGCATCGCTTGGGAGTTGTTTTTTCACCACGGCTGAACTTACATCTGATTATGATTTGTGCTTCATCTCGGATGTATTTCAGTACGATCAGTCGAGTTCTTGGAAACTTTTGACCTATAGTTCAGGTCATCGAGACAATTGGTCATTTAGTTAGTGATTGTGGCCAAGTGTTAGAGAAAACTGATATTTAGGATGTAGTCTTTCAGGAAAGAAAAAAATGGAATCAGCTGGTGGGTGATAGTGACAAGACAAGGATGCCAATTGCCTGTATGGATAGCTTGTCAAATTTTCAATTTTTTTCCTTCATTCTACATATTTTGTTTGAAATAAATCCCAAAATAGTATTGTTTAGAAAACATCATGAAATGTTATAGTAAGAATATTTCTGATAGCAGAAATTGTTTAGAAACATCTTTAACATGTCTGTCAGCCTCATTGAAGTGGAGCACAGAAAGGGGGATTTTAGTTTTATGCTAACGAATAAAGTTTGAACTGTATTATTTTCTTGCACATGCTGAAACGCTTCAGCATAACTAGCTTAAGCATTGCATTTATTTCTTATGTTCAATTGAATTTCTCTCCTAATTCCATAAGGCCCTACACGTATCTATTAGTTTTTCTTTTGAAATTCATCTAGGAGATGGTTTCCATCAACCTTGCAAGTTTGCATCGATACGACAGATATTTGGTTCATATGGAAAGAATAAAAGATTCAAAACACATTTGGTTTGACTCATACAATTATGCAGTCTTTTGATAAAATCCACACATAATGTGTGATAATGTAAAATGCTTATAGTCTTTAAGAATTTTCTTGGCTGAAACTGTTGTTATTACAGGAGTTGTGGTAAAGTCAAGCTGCCTCACTTCTATTGTTGCAGTGGAAGGACAGGGGAGCAGGACAACTCAACCAGATGAGCCAATGCAGGGTAAAAAAAGAACAGGCTGAAAATGGCTTAAATCCCATAGAATTTTTCCTCATACCTGGGAGCTACAGTTTCCTTTTGAGTATTCTTCTTTATTAGGTTCTTTAAATTTGGCATCTTTTCCCCTTTCAGAAAGGACGCTCATTGTATGGCAGATTGTAAGATTTCAATATGTGATAACTATTAATTAGCTTTTGAGCTACATCCTTGTTTTGTCTAAAATGGGACCCTTTTAGCGTGTCTTTTGCTTTCTCAAATCACTTCTTCCATAGAAGGTTTTACTTTCTTCAATTCAAGAATTTCTACTAAGCAGATGGAAGTGATGATAAATTGTTTGGACCATACTTTTTCTTTCTTTCTAATTATAATTTCAAGGGAGGATTCAAACATCTGTAGTACAGGAAGGGAAACTTTAATTAGGTTGGTAGTGAAAACTATCCGCTTGAGTATAACTCAATTGGTTGATGTATCTTTAATTAAGGGGTTAGAAGTTCGAATTCTCTCACCGTTGAAAGAGAAAATCGAGTGTTCAAAACTTTATTTTGGTTTTTTTTTTTAATAAATGTTTTGTATATTTGATTACTTTAGTCAGAAAAGGTGGAAATTGAGAAGGAAAAAACTTTGCTATGAAAGAATGTTAGGATATCTTTTGAAAATTTTGTTAAATTTGTTATTTTACCTCGAAAGTTGACTGTGATTTCTGAAGGTATATCGTTACAAAATTGTTGTATTAGTAATGTGTGTAAATCTATTCTTTGGAGAAGTATGATATCTGTTGTCTTTTAATTTATTTCATTATTTCTTTTTAAAATAAATCATTGTCTTTTATTTTAATTATTATTATTATTTTTAAAATAAATCATTCTCTTTTATTACACTACATGTACATAAAAAAAATGCTAAGAGTCAACAAATATGATTTTTTTTTTGCCTTTCATTTTTCTTTAGCATAACAATTTAAGCAAGAGGTCTTTGGTGGGCATAAAGCTTAGTAGGTGTGTTCTAAGAGTGGTTATTTTATAAATGAAGATAGTAAATGATATAAATAAGTATGAATGTAATTTGTTTTTTTTTATTTTTATCTTTATTTTTTGAGAAGTGTTTATTTTTTATTTTTAAAAATTATATTTGTTTTTGAAAACTATATATTTTTTTAGTTTTCTAAATTCGAATTGAGTTTTGAAAATATGAAAAGATGATGGATAACCAAACAAAAAAACTATTGCATATGTCTGGGGTACAGTTGATTGTTACCGTTCATAGACATAGACACACCGATCGACATGGTATATTTGTATTTTTCTTTAAGCGAAGTACCATCTACTATAATAACAGGCTGACAGCTCGTGAAACCCTCGAATGCGAGAACCTAATGCCATGAACAAATAAACGCCATCGTCCCAGTATCTCAAACACAGTTCATAGATTATCTATCTTCAATGCCTCAACCTAGGAATCTGTTTTATTTCATATTTTGAATTGAGTTTTAAAAATATGAAAAGTTTTTTAAAACGTAAAAGAAGAATAGATAATACCACAAAAAAAAAAAAGTTATAGGTGGATTTACCAACTCAATTTTTAAAAATAAAAATAGAAAATCAAATAGTTATTATTATTCACGTATCCACCGAACCAAGTTTTGTTCCCGGCAAAACAATCCCCATCTTTTTCCTCAAGGTCAAGGCAAGAGCTTCGCAATAAATTCGCATGGGATCGTGAAGAAGTAATCTTGCCATATCCATTTCGTTCCACCCATTAAAAAAGTTCCCTCTGATCGAAGACCTCAAACGACGACGCGTGTGAATGCCATGGTGACGACGCATCTTCTCCACCGCCGTCACTCAAGCATGAGCTGCCGCATGCCCGACAGATCGACCAATTTCTGGAAGTGGCTCTCGGCCAATGGGCTCCAACTGCGTTTGTCAGGGATCGGATAATGTCGTCTACCCGATTGGTGAACCCTATCGGCAATTGCGTTCTTCTAGGACCCTGA

mRNA sequence

ATGGCGTTGAGGATTATGAGGGCGCTCGAGGGTCAGACGGGTTCGATGCTAGGGCTTAAAGCGATGGCTAATGTTTTACCTCAATCCTCGCCGTTATCTGGGATCATGGACCGTAAGGATTCCACGCCGCCGCTTGTTCTCCCGGAGTTTAACCATGAGTCTGACAGGGACAGGATCAAAAACTGCAGTATTGTGGGATTTGGTTTCCCTAGTTTATCTTTTTCCGGGTCCATGGAGCTCATGGCTGTTCCTAAGAGGAAGGTTTCTCCACATAAAAGGGGCATAAGAAATGGCCCAAAGGCTCTGAAACCTATCCCATACGATCAGTCGAGTTCTTGGAAACTTTTGACCTATAGTTCAGGAGTTGTGGTAAAGTCAAGCTGCCTCACTTCTATTGTTGCAGTGGAAGGACAGGGGAGCAGGACAACTCAACCAGATGAGCCAATGCAGGGTTCTTTAAATTTGGCATCTTTTCCCCTTTCAGAAAGGACGCTCATTGTATGGCAGATTACCTCAAACGACGACGCGTGTGAATGCCATGGTGACGACGCATCTTCTCCACCGCCGTCACTCAAGCATGAGCTGCCGCATGCCCGACAGATCGACCAATTTCTGGAAGTGGCTCTCGGCCAATGGGCTCCAACTGCGTTTGTCAGGGATCGGATAATGTCGTCTACCCGATTGGTGAACCCTATCGGCAATTGCGTTCTTCTAGGACCCTGA

Coding sequence (CDS)

ATGGCGTTGAGGATTATGAGGGCGCTCGAGGGTCAGACGGGTTCGATGCTAGGGCTTAAAGCGATGGCTAATGTTTTACCTCAATCCTCGCCGTTATCTGGGATCATGGACCGTAAGGATTCCACGCCGCCGCTTGTTCTCCCGGAGTTTAACCATGAGTCTGACAGGGACAGGATCAAAAACTGCAGTATTGTGGGATTTGGTTTCCCTAGTTTATCTTTTTCCGGGTCCATGGAGCTCATGGCTGTTCCTAAGAGGAAGGTTTCTCCACATAAAAGGGGCATAAGAAATGGCCCAAAGGCTCTGAAACCTATCCCATACGATCAGTCGAGTTCTTGGAAACTTTTGACCTATAGTTCAGGAGTTGTGGTAAAGTCAAGCTGCCTCACTTCTATTGTTGCAGTGGAAGGACAGGGGAGCAGGACAACTCAACCAGATGAGCCAATGCAGGGTTCTTTAAATTTGGCATCTTTTCCCCTTTCAGAAAGGACGCTCATTGTATGGCAGATTACCTCAAACGACGACGCGTGTGAATGCCATGGTGACGACGCATCTTCTCCACCGCCGTCACTCAAGCATGAGCTGCCGCATGCCCGACAGATCGACCAATTTCTGGAAGTGGCTCTCGGCCAATGGGCTCCAACTGCGTTTGTCAGGGATCGGATAATGTCGTCTACCCGATTGGTGAACCCTATCGGCAATTGCGTTCTTCTAGGACCCTGA

Protein sequence

MALRIMRALEGQTGSMLGLKAMANVLPQSSPLSGIMDRKDSTPPLVLPEFNHESDRDRIKNCSIVGFGFPSLSFSGSMELMAVPKRKVSPHKRGIRNGPKALKPIPYDQSSSWKLLTYSSGVVVKSSCLTSIVAVEGQGSRTTQPDEPMQGSLNLASFPLSERTLIVWQITSNDDACECHGDDASSPPPSLKHELPHARQIDQFLEVALGQWAPTAFVRDRIMSSTRLVNPIGNCVLLGP
Homology
[Close]
BLAST of Lag0040135 vs. NCBI nr
Match: XP_023541204.1 (uncharacterized protein LOC111801437 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 196.4 bits (498), Expect = 2.7e-46
Identity = 96/106 (90.57%), Postives = 99/106 (93.40%), Query Frame = 0 

Query: 1   MALRIMRALEGQTGSMLGLKAMANVLPQSSPLSGIMDRKDSTPPLVLPEFNHESDRDRIK 60
           MALRI+RA+EGQTGSM GLKAM  VLP SSP+SGIMDRKDS PPLVLPEFNHESDRDRI 
Sbjct: 1   MALRILRAVEGQTGSMFGLKAMTKVLPHSSPISGIMDRKDSAPPLVLPEFNHESDRDRIN 60

Query: 61  NCSIVGFGFPSLSFSGSMELMAVPKRKVSPHKRGIRNGPKALKPIP 107
           NCSIVGFGFPSLSFSGSMELMAVPKRK SPHKRGIRNGPKALKPIP
Sbjct: 61  NCSIVGFGFPSLSFSGSMELMAVPKRKTSPHKRGIRNGPKALKPIP 106

[Close]
BLAST of Lag0040135 vs. NCBI nr
Match: XP_022151273.1 (uncharacterized protein LOC111019232 [Momordica charantia])

HSP 1 Score: 196.1 bits (497), Expect = 3.6e-46
Identity = 99/106 (93.40%), Postives = 100/106 (94.34%), Query Frame = 0 

Query: 1   MALRIMRALEGQTGSMLGLKAMANVLPQSSPLSGIMDRKDSTPPLVLPEFNHESDRDRIK 60
           MALRIMRA+EGQT SMLGLKAMANVLP  SPLSGIMDRKDSTPPLVLPEFNHESD DRI 
Sbjct: 1   MALRIMRAVEGQTCSMLGLKAMANVLPHFSPLSGIMDRKDSTPPLVLPEFNHESDSDRIG 60

Query: 61  NCSIVGFGFPSLSFSGSMELMAVPKRKVSPHKRGIRNGPKALKPIP 107
           NCS VGFGFPSLSFSGSMELMAVPKRKVSPHKRGIRNGPKALKPIP
Sbjct: 61  NCSSVGFGFPSLSFSGSMELMAVPKRKVSPHKRGIRNGPKALKPIP 106

[Close]
BLAST of Lag0040135 vs. NCBI nr
Match: XP_022968104.1 (uncharacterized protein LOC111467436 [Cucurbita maxima])

HSP 1 Score: 194.9 bits (494), Expect = 8.0e-46
Identity = 96/106 (90.57%), Postives = 99/106 (93.40%), Query Frame = 0 

Query: 1   MALRIMRALEGQTGSMLGLKAMANVLPQSSPLSGIMDRKDSTPPLVLPEFNHESDRDRIK 60
           MALRI+RA+EGQTGSM GLKAMA VLP SSP+SGIMD KDS PPLVLPEFNHESDRD I 
Sbjct: 1   MALRILRAVEGQTGSMFGLKAMAKVLPHSSPISGIMDHKDSAPPLVLPEFNHESDRDGIN 60

Query: 61  NCSIVGFGFPSLSFSGSMELMAVPKRKVSPHKRGIRNGPKALKPIP 107
           NCSIVGFGFPSLSFSGSMELMAVPKRKVSPHKRGIRNGPKALKPIP
Sbjct: 61  NCSIVGFGFPSLSFSGSMELMAVPKRKVSPHKRGIRNGPKALKPIP 106

[Close]
BLAST of Lag0040135 vs. NCBI nr
Match: KAG6574067.1 (hypothetical protein SDJN03_27954, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 193.7 bits (491), Expect = 1.8e-45
Identity = 95/106 (89.62%), Postives = 98/106 (92.45%), Query Frame = 0 

Query: 1   MALRIMRALEGQTGSMLGLKAMANVLPQSSPLSGIMDRKDSTPPLVLPEFNHESDRDRIK 60
           MALRI+RA+EGQTGSM GLKAM  VLP SSP+SGIMDRKDS PPLVLPEFNHESDRD I 
Sbjct: 1   MALRILRAVEGQTGSMFGLKAMTKVLPHSSPISGIMDRKDSAPPLVLPEFNHESDRDGIN 60

Query: 61  NCSIVGFGFPSLSFSGSMELMAVPKRKVSPHKRGIRNGPKALKPIP 107
           NCSIVGFGFPSLSFSGSMELMAVPKRK SPHKRGIRNGPKALKPIP
Sbjct: 61  NCSIVGFGFPSLSFSGSMELMAVPKRKTSPHKRGIRNGPKALKPIP 106

[Close]
BLAST of Lag0040135 vs. NCBI nr
Match: XP_022945635.1 (uncharacterized protein LOC111449817 [Cucurbita moschata])

HSP 1 Score: 191.4 bits (485), Expect = 8.8e-45
Identity = 94/106 (88.68%), Postives = 99/106 (93.40%), Query Frame = 0 

Query: 1   MALRIMRALEGQTGSMLGLKAMANVLPQSSPLSGIMDRKDSTPPLVLPEFNHESDRDRIK 60
           MALRI+RA+EGQTGSM GLKAMANVLP SSP++GI+ RKDS PPLVLPEFNHESDRD I 
Sbjct: 1   MALRILRAVEGQTGSMFGLKAMANVLPHSSPITGIIYRKDSAPPLVLPEFNHESDRDGIN 60

Query: 61  NCSIVGFGFPSLSFSGSMELMAVPKRKVSPHKRGIRNGPKALKPIP 107
           NCSIVGFGFPSLSFSGSMELMAVPKRK SPHKRGIRNGPKALKPIP
Sbjct: 61  NCSIVGFGFPSLSFSGSMELMAVPKRKTSPHKRGIRNGPKALKPIP 106

[Close]
BLAST of Lag0040135 vs. ExPASy TrEMBL
Match: A0A6J1DBR3 (50S ribosomal protein L32, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111019232 PE=3 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 1.7e-46
Identity = 99/106 (93.40%), Postives = 100/106 (94.34%), Query Frame = 0 

Query: 1   MALRIMRALEGQTGSMLGLKAMANVLPQSSPLSGIMDRKDSTPPLVLPEFNHESDRDRIK 60
           MALRIMRA+EGQT SMLGLKAMANVLP  SPLSGIMDRKDSTPPLVLPEFNHESD DRI 
Sbjct: 1   MALRIMRAVEGQTCSMLGLKAMANVLPHFSPLSGIMDRKDSTPPLVLPEFNHESDSDRIG 60

Query: 61  NCSIVGFGFPSLSFSGSMELMAVPKRKVSPHKRGIRNGPKALKPIP 107
           NCS VGFGFPSLSFSGSMELMAVPKRKVSPHKRGIRNGPKALKPIP
Sbjct: 61  NCSSVGFGFPSLSFSGSMELMAVPKRKVSPHKRGIRNGPKALKPIP 106

[Close]
BLAST of Lag0040135 vs. ExPASy TrEMBL
Match: A0A6J1HYN6 (50S ribosomal protein L32, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111467436 PE=3 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 3.9e-46
Identity = 96/106 (90.57%), Postives = 99/106 (93.40%), Query Frame = 0 

Query: 1   MALRIMRALEGQTGSMLGLKAMANVLPQSSPLSGIMDRKDSTPPLVLPEFNHESDRDRIK 60
           MALRI+RA+EGQTGSM GLKAMA VLP SSP+SGIMD KDS PPLVLPEFNHESDRD I 
Sbjct: 1   MALRILRAVEGQTGSMFGLKAMAKVLPHSSPISGIMDHKDSAPPLVLPEFNHESDRDGIN 60

Query: 61  NCSIVGFGFPSLSFSGSMELMAVPKRKVSPHKRGIRNGPKALKPIP 107
           NCSIVGFGFPSLSFSGSMELMAVPKRKVSPHKRGIRNGPKALKPIP
Sbjct: 61  NCSIVGFGFPSLSFSGSMELMAVPKRKVSPHKRGIRNGPKALKPIP 106

[Close]
BLAST of Lag0040135 vs. ExPASy TrEMBL
Match: A0A6J1G1I2 (50S ribosomal protein L32, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111449817 PE=3 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 4.3e-45
Identity = 94/106 (88.68%), Postives = 99/106 (93.40%), Query Frame = 0 

Query: 1   MALRIMRALEGQTGSMLGLKAMANVLPQSSPLSGIMDRKDSTPPLVLPEFNHESDRDRIK 60
           MALRI+RA+EGQTGSM GLKAMANVLP SSP++GI+ RKDS PPLVLPEFNHESDRD I 
Sbjct: 1   MALRILRAVEGQTGSMFGLKAMANVLPHSSPITGIIYRKDSAPPLVLPEFNHESDRDGIN 60

Query: 61  NCSIVGFGFPSLSFSGSMELMAVPKRKVSPHKRGIRNGPKALKPIP 107
           NCSIVGFGFPSLSFSGSMELMAVPKRK SPHKRGIRNGPKALKPIP
Sbjct: 61  NCSIVGFGFPSLSFSGSMELMAVPKRKTSPHKRGIRNGPKALKPIP 106

[Close]
BLAST of Lag0040135 vs. ExPASy TrEMBL
Match: A0A0A0KQP7 (50S ribosomal protein L32, chloroplastic OS=Cucumis sativus OX=3659 GN=Csa_5G606360 PE=3 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 9.2e-40
Identity = 88/106 (83.02%), Postives = 92/106 (86.79%), Query Frame = 0 

Query: 1   MALRIMRALEGQTGSMLGLKAMANVLPQSSPLSGIMDRKDSTPPLVLPEFNHESDRDRIK 60
           MALRIMRALEGQ GSMLGLKAMA  LP SSP+SG+M  KDS PPLVLPEFN E D D+  
Sbjct: 1   MALRIMRALEGQMGSMLGLKAMAYGLPHSSPISGVMGPKDSPPPLVLPEFNQEYDDDKTN 60

Query: 61  NCSIVGFGFPSLSFSGSMELMAVPKRKVSPHKRGIRNGPKALKPIP 107
           NCSIVGFGFPSLSFSGSMELMAVPK+KVSPHKR IRN PKALKPIP
Sbjct: 61  NCSIVGFGFPSLSFSGSMELMAVPKKKVSPHKRRIRNAPKALKPIP 106

[Close]
BLAST of Lag0040135 vs. ExPASy TrEMBL
Match: A0A5A7SYB6 (50S ribosomal protein L32, chloroplastic OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1932G00190 PE=3 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 1.3e-38
Identity = 89/106 (83.96%), Postives = 91/106 (85.85%), Query Frame = 0 

Query: 1   MALRIMRALEGQTGSMLGLKAMANVLPQSSPLSGIMDRKDSTPPLVLPEFNHESDRDRIK 60
           MALRIMRALEGQTGSMLGLKAMA  LP SS   G+M  KDS PPLVLPEFN ESD DRI 
Sbjct: 1   MALRIMRALEGQTGSMLGLKAMAYGLPHSS--HGVMGPKDSPPPLVLPEFNQESDEDRIN 60

Query: 61  NCSIVGFGFPSLSFSGSMELMAVPKRKVSPHKRGIRNGPKALKPIP 107
           NCSIVGFGFPSL FSGSMELMAVPK+KVSPHKR IRN PKALKPIP
Sbjct: 61  NCSIVGFGFPSLYFSGSMELMAVPKKKVSPHKRRIRNAPKALKPIP 104

[Close]
BLAST of Lag0040135 vs. TAIR 10
Match: AT1G26740.1 (Ribosomal L32p protein family )

HSP 1 Score: 101.7 bits (252), Expect = 8.6e-22
Identity = 56/108 (51.85%), Postives = 77/108 (71.30%), Query Frame = 0 

Query: 1   MALRI--MRALEGQTGSMLGLKAMANVLPQSSPLSGIMDRKDSTPPLVLPEFNHESDRDR 60
           MALR+  ++    ++  +L  +++++V    SPL+G  DR  S PPLVLPEF+ ++    
Sbjct: 1   MALRLTSLKRAAVESCRILETRSLSHVAAMPSPLNGAFDRPISMPPLVLPEFD-QNQPGL 60

Query: 61  IKNCSIVGFGFPSLSFSGSMELMAVPKRKVSPHKRGIRNGPKALKPIP 107
           I+  S  GFG PS +F+GSMELMAVPK+K+S HKRGIRNGPKALKP+P
Sbjct: 61  IEEKSF-GFGLPSFAFNGSMELMAVPKKKISKHKRGIRNGPKALKPVP 106

[Close]
BLAST of Lag0040135 vs. TAIR 10
Match: AT1G69485.1 (Ribosomal L32p protein family )

HSP 1 Score: 55.1 bits (131), Expect = 9.2e-08
Identity = 24/29 (82.76%), Postives = 26/29 (89.66%), Query Frame = 0 

Query: 78  MELMAVPKRKVSPHKRGIRNGPKALKPIP 107
           MELMAVPK+K+S HKRGIRNGPKA KP P
Sbjct: 1   MELMAVPKKKISKHKRGIRNGPKAFKPTP 29

The following BLAST results are available for this feature:
BLAST of Lag0040135 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023541204.12.7e-4690.57uncharacterized protein LOC111801437 [Cucurbita pepo subsp. pepo][more]
XP_022151273.13.6e-4693.40uncharacterized protein LOC111019232 [Momordica charantia][more]
XP_022968104.18.0e-4690.57uncharacterized protein LOC111467436 [Cucurbita maxima][more]
KAG6574067.11.8e-4589.62hypothetical protein SDJN03_27954, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022945635.18.8e-4588.68uncharacterized protein LOC111449817 [Cucurbita moschata][more]
BLAST of Lag0040135 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Lag0040135 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1DBR31.7e-4693.4050S ribosomal protein L32, chloroplastic OS=Momordica charantia OX=3673 GN=LOC11... [more]
A0A6J1HYN63.9e-4690.5750S ribosomal protein L32, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC11146... [more]
A0A6J1G1I24.3e-4588.6850S ribosomal protein L32, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111... [more]
A0A0A0KQP79.2e-4083.0250S ribosomal protein L32, chloroplastic OS=Cucumis sativus OX=3659 GN=Csa_5G606... [more]
A0A5A7SYB61.3e-3883.9650S ribosomal protein L32, chloroplastic OS=Cucumis melo var. makuwa OX=1194695 ... [more]
BLAST of Lag0040135 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G26740.18.6e-2251.85Ribosomal L32p protein family [more]
AT1G69485.19.2e-0882.76Ribosomal L32p protein family [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR2102639S RIBOSOMAL PROTEIN L32, MITOCHONDRIALcoord: 16..106
NoneNo IPR availablePANTHERPTHR21026:SF5BNACNNG33200D PROTEINcoord: 16..106

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0040135.1Lag0040135.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006412 translation
cellular_component GO:0009507 chloroplast
cellular_component GO:0005762 mitochondrial large ribosomal subunit
molecular_function GO:0003735 structural constituent of ribosome