Lag0040120 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0040120
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	E3 ubiquitin-protein ligase RING1-like
Location	chr13: 2325769 .. 2326362 (+)
RNA-Seq Expression	Lag0040120
Synteny	Lag0040120

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCTGAACCAGACCCATCTGAGCTTTCTTCTGCCCTCGAAAGACTGCTTCTCAACACAGACGTCTCTTTGATCGCACCCCTTTTCTTGGGTTTCGCCACTATGATCCCTTCAACCCCAAATCAAGGAATCCAGACAATACCCACTTTGCCTGAGCGATTCATCTTCTTCAATCCCTTTTCCCATCAATTGGTGGTGATCCAATCCACTCCCAAGGACGGCCAGCCCCCAGCTTCCAAAGCCTCCATCAAAGCCATGCCCTCTGTCCATGTCTCTGAACAAACTGAATGTGTGATCTGTTTGGAGGAGATTGAAGTCGGTGGCCTTGCTAAAGAAATGCCCTGTACCCATAAATTCCATGCCGATTGCATTGAGAAGTGGCTGGAGTTACATGGGTCTTGCCCTGTTTGTAGATATCAGATGCCAATCGATGATGAAGATGAGGGGAAGAAGGTTGAAGACGAAGGGACTGAGAGGAGAGGAGAAAGGGAGATTTGGGTGAGTTTCTCTTTCGAAAATGCCATGAGAAATGGAGATTCAGTTCAAACTCCTTCAAGTGATTCTGATTCTGAACATTCTTATGTACAGTGA

mRNA sequence

ATGGCTTCTGAACCAGACCCATCTGAGCTTTCTTCTGCCCTCGAAAGACTGCTTCTCAACACAGACGTCTCTTTGATCGCACCCCTTTTCTTGGGTTTCGCCACTATGATCCCTTCAACCCCAAATCAAGGAATCCAGACAATACCCACTTTGCCTGAGCGATTCATCTTCTTCAATCCCTTTTCCCATCAATTGGTGGTGATCCAATCCACTCCCAAGGACGGCCAGCCCCCAGCTTCCAAAGCCTCCATCAAAGCCATGCCCTCTGTCCATGTCTCTGAACAAACTGAATGTGTGATCTGTTTGGAGGAGATTGAAGTCGGTGGCCTTGCTAAAGAAATGCCCTGTACCCATAAATTCCATGCCGATTGCATTGAGAAGTGGCTGGAGTTACATGGGTCTTGCCCTGTTTGTAGATATCAGATGCCAATCGATGATGAAGATGAGGGGAAGAAGGTTGAAGACGAAGGGACTGAGAGGAGAGGAGAAAGGGAGATTTGGGTGAGTTTCTCTTTCGAAAATGCCATGAGAAATGGAGATTCAGTTCAAACTCCTTCAAGTGATTCTGATTCTGAACATTCTTATGTACAGTGA

Coding sequence (CDS)

ATGGCTTCTGAACCAGACCCATCTGAGCTTTCTTCTGCCCTCGAAAGACTGCTTCTCAACACAGACGTCTCTTTGATCGCACCCCTTTTCTTGGGTTTCGCCACTATGATCCCTTCAACCCCAAATCAAGGAATCCAGACAATACCCACTTTGCCTGAGCGATTCATCTTCTTCAATCCCTTTTCCCATCAATTGGTGGTGATCCAATCCACTCCCAAGGACGGCCAGCCCCCAGCTTCCAAAGCCTCCATCAAAGCCATGCCCTCTGTCCATGTCTCTGAACAAACTGAATGTGTGATCTGTTTGGAGGAGATTGAAGTCGGTGGCCTTGCTAAAGAAATGCCCTGTACCCATAAATTCCATGCCGATTGCATTGAGAAGTGGCTGGAGTTACATGGGTCTTGCCCTGTTTGTAGATATCAGATGCCAATCGATGATGAAGATGAGGGGAAGAAGGTTGAAGACGAAGGGACTGAGAGGAGAGGAGAAAGGGAGATTTGGGTGAGTTTCTCTTTCGAAAATGCCATGAGAAATGGAGATTCAGTTCAAACTCCTTCAAGTGATTCTGATTCTGAACATTCTTATGTACAGTGA

Protein sequence

MASEPDPSELSSALERLLLNTDVSLIAPLFLGFATMIPSTPNQGIQTIPTLPERFIFFNPFSHQLVVIQSTPKDGQPPASKASIKAMPSVHVSEQTECVICLEEIEVGGLAKEMPCTHKFHADCIEKWLELHGSCPVCRYQMPIDDEDEGKKVEDEGTERRGEREIWVSFSFENAMRNGDSVQTPSSDSDSEHSYVQ

Homology

[Close]

BLAST of Lag0040120 vs. NCBI nr
Match: XP_022968096.1 (E3 ubiquitin-protein ligase RING1-like [Cucurbita maxima])

HSP 1 Score: 329.3 bits (843), Expect = 2.2e-86
Identity = 164/202 (81.19%), Postives = 178/202 (88.12%), Query Frame = 0


Query: 1   MASEPDPSELSSALERLLLNTDVSLIAPLFLGFATMI----PSTPNQGIQTIPTLPERFI 60
           M SEPDPSELSSALE L+LNTDVSL+AP FLGFATMI    P +PNQGI+T PTLP+RFI
Sbjct: 1   MPSEPDPSELSSALETLILNTDVSLLAPHFLGFATMIHTIAPQSPNQGIETNPTLPDRFI 60

Query: 61  FFNPFSHQLVVIQSTPKDGQPPASKASIKAMPSVHVSEQTECVICLEEIEVGGLAKEMPC 120
           FFNPF HQL++IQSTPK+ QPPASKASI AMPSVHVS QTECVICL+EIEVGG+AKEMPC
Sbjct: 61  FFNPFLHQLIMIQSTPKNSQPPASKASIIAMPSVHVSAQTECVICLDEIEVGGVAKEMPC 120

Query: 121 THKFHADCIEKWLELHGSCPVCRYQMPI-DDEDEGKKVEDEGTERRGEREIWVSFSFENA 180
            HKFH DCIEKWLELHGSCPVCRY+MP+ DDEDEGKKVEDEGTER GEREIWVSFSF+N 
Sbjct: 121 NHKFHGDCIEKWLELHGSCPVCRYEMPVDDDEDEGKKVEDEGTERMGEREIWVSFSFDNP 180

Query: 181 MRNGDSVQTPSSDSDSEHSYVQ 198
           M N DS+QTP  DSD  HSYVQ
Sbjct: 181 MGNQDSLQTPPIDSD--HSYVQ 200

[Close]

BLAST of Lag0040120 vs. NCBI nr
Match: KAG7013138.1 (E3 ubiquitin-protein ligase RING1-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 325.9 bits (834), Expect = 2.5e-85
Identity = 162/201 (80.60%), Postives = 178/201 (88.56%), Query Frame = 0


Query: 1   MASEPDPSELSSALERLLLNTDVSLIAPLFLGFATMI----PSTPNQGIQTIPTLPERFI 60
           M SEPDPSELSSALE L+LNTDVSL+AP FLGFATMI    P +PNQGI+T PTLP+RFI
Sbjct: 1   MPSEPDPSELSSALETLILNTDVSLLAPHFLGFATMIHTTAPQSPNQGIETNPTLPDRFI 60

Query: 61  FFNPFSHQLVVIQSTPKDGQPPASKASIKAMPSVHVSEQTECVICLEEIEVGGLAKEMPC 120
           FFNPF HQL++IQSTPK+ QPPASKASI AMPSVHVSEQT+CVICL+EIEVGGLAKEMPC
Sbjct: 61  FFNPFLHQLIMIQSTPKNSQPPASKASIIAMPSVHVSEQTQCVICLDEIEVGGLAKEMPC 120

Query: 121 THKFHADCIEKWLELHGSCPVCRYQMPIDDEDEGKKVEDEGTERRGEREIWVSFSFENAM 180
            HKFH DCIEKWLELHGSCPVCRY+MP+ DEDEGK+VE EGTER GEREIWVSFSF+N M
Sbjct: 121 NHKFHGDCIEKWLELHGSCPVCRYEMPV-DEDEGKRVESEGTERMGEREIWVSFSFDNPM 180

Query: 181 RNGDSVQTPSSDSDSEHSYVQ 198
            N DS+QTPS DSD  HS+VQ
Sbjct: 181 GNQDSLQTPSIDSD--HSHVQ 198

[Close]

BLAST of Lag0040120 vs. NCBI nr
Match: XP_038891708.1 (E3 ubiquitin-protein ligase MPSR1-like [Benincasa hispida])

HSP 1 Score: 322.8 bits (826), Expect = 2.1e-84
Identity = 158/198 (79.80%), Postives = 178/198 (89.90%), Query Frame = 0


Query: 1   MASEPDPSELSSALERLLLNTDVSLIAPLFLGFATMIPSTPNQGIQTIP-TLPERFIFFN 60
           MAS+PDPSEL SALERL LN DVSLIAPLFLGFA+MI ++ +Q I+  P TLP+RFIFFN
Sbjct: 1   MASQPDPSELGSALERLFLNRDVSLIAPLFLGFASMIRTSQDQEIEATPTTLPDRFIFFN 60

Query: 61  PFSHQLVVIQSTPKDGQPPASKASIKAMPSVHVSEQTECVICLEEIEVGGLAKEMPCTHK 120
           PF+HQL+VIQ+TPKDGQPPASKASIKAMPSV VSE TECVICLEEIEVGGL+K+MPC HK
Sbjct: 61  PFAHQLIVIQATPKDGQPPASKASIKAMPSVPVSELTECVICLEEIEVGGLSKQMPCNHK 120

Query: 121 FHADCIEKWLELHGSCPVCRYQMPIDDEDEGKKVEDEGTERRGEREIWVSFSFENAMRNG 180
           FH DCI+KWLELHGSCPVCRYQMPID EDEGKKV++EGTE RGE EIWVSFSF+N +RNG
Sbjct: 121 FHGDCIQKWLELHGSCPVCRYQMPIDGEDEGKKVDNEGTESRGETEIWVSFSFDNTIRNG 180

Query: 181 DSVQTPSSDSDSEHSYVQ 198
           +S+QTPS+DSD  HS VQ
Sbjct: 181 ESIQTPSTDSD--HSDVQ 196

[Close]

BLAST of Lag0040120 vs. NCBI nr
Match: KAG6574079.1 (E3 ubiquitin-protein ligase MPSR1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 322.8 bits (826), Expect = 2.1e-84
Identity = 161/201 (80.10%), Postives = 177/201 (88.06%), Query Frame = 0


Query: 1   MASEPDPSELSSALERLLLNTDVSLIAPLFLGFATMI----PSTPNQGIQTIPTLPERFI 60
           M SEPDPSELSSALE L+LNTDVSL+AP FLGFATMI    P +PNQGI+T PTLP+R I
Sbjct: 1   MPSEPDPSELSSALETLILNTDVSLLAPHFLGFATMIHTTAPQSPNQGIETNPTLPDRCI 60

Query: 61  FFNPFSHQLVVIQSTPKDGQPPASKASIKAMPSVHVSEQTECVICLEEIEVGGLAKEMPC 120
           FFNPF HQL++IQSTPK+ QPPASKASI AMPSVHVSEQT+CVICL+EIEVGGLAKEMPC
Sbjct: 61  FFNPFLHQLIMIQSTPKNSQPPASKASIIAMPSVHVSEQTQCVICLDEIEVGGLAKEMPC 120

Query: 121 THKFHADCIEKWLELHGSCPVCRYQMPIDDEDEGKKVEDEGTERRGEREIWVSFSFENAM 180
            HKFH DCIEKWLELHGSCPVCRY+MP+ DEDEGK+VE EGTER GEREIWVSFSF+N M
Sbjct: 121 NHKFHGDCIEKWLELHGSCPVCRYEMPV-DEDEGKRVESEGTERMGEREIWVSFSFDNPM 180

Query: 181 RNGDSVQTPSSDSDSEHSYVQ 198
            N DS+QTPS DSD  HS+VQ
Sbjct: 181 GNQDSLQTPSIDSD--HSHVQ 198

[Close]

BLAST of Lag0040120 vs. NCBI nr
Match: XP_008446365.1 (PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis melo] >KAA0034425.1 E3 ubiquitin-protein ligase RING1-like [Cucumis melo var. makuwa] >TYK17709.1 E3 ubiquitin-protein ligase RING1-like [Cucumis melo var. makuwa])

HSP 1 Score: 320.1 bits (819), Expect = 1.4e-83
Identity = 157/198 (79.29%), Postives = 178/198 (89.90%), Query Frame = 0


Query: 1   MASEPDPSELSSALERLLLNTDVSLIAPLFLGFATMIPSTPNQGIQTIP-TLPERFIFFN 60
           MAS PDPS++SSALERLLLN DVSLIAPLFLGFA+MI S+ N   +  P TLP+RFIFFN
Sbjct: 1   MASPPDPSDISSALERLLLNRDVSLIAPLFLGFASMIRSSQNHENEPTPTTLPDRFIFFN 60

Query: 61  PFSHQLVVIQSTPKDGQPPASKASIKAMPSVHVSEQTECVICLEEIEVGGLAKEMPCTHK 120
           PFSHQL+V+Q+TPKDGQPPASKASIKAMPS+ VSE TECVICL+EIEVGGLAK+MPC HK
Sbjct: 61  PFSHQLMVVQATPKDGQPPASKASIKAMPSLPVSEVTECVICLDEIEVGGLAKQMPCNHK 120

Query: 121 FHADCIEKWLELHGSCPVCRYQMPIDDEDEGKKVEDEGTERRGEREIWVSFSFENAMRNG 180
           FH +CI+KWLELHGSCPVCRYQMPID +DEGKKV DEGTE RGE EIWVSFSF++++RNG
Sbjct: 121 FHGECIQKWLELHGSCPVCRYQMPIDGDDEGKKVGDEGTESRGETEIWVSFSFDHSIRNG 180

Query: 181 DSVQTPSSDSDSEHSYVQ 198
           +SVQTPS+DSD  HSYVQ
Sbjct: 181 ESVQTPSTDSD--HSYVQ 196

[Close]

BLAST of Lag0040120 vs. ExPASy Swiss-Prot
Match: Q9LQX2 (E3 ubiquitin-protein ligase MPSR1 OS=Arabidopsis thaliana OX=3702 GN=MPSR1 PE=1 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 1.7e-33
Identity = 86/211 (40.76%), Postives = 113/211 (53.55%), Query Frame = 0


Query: 1   MASEPDP---SELSSALERLLLNTDVSLIAPLFLGFATMIPSTPNQGIQTIPTLPERFIF 60
           MA+E +    +E SS   R L N D+ L  P  LGF+     + N     + +  ER I 
Sbjct: 1   MATEQEAEVGTETSSVSGRFLRNRDLYLFLPFLLGFSDQ--ESSNGDDDDVASSRERIIL 60

Query: 61  FNPFSHQLVVIQSTP-------------KDGQPPASKASIKAMPSVHVSE-QTECVICLE 120
            NPF+  ++V++ +              ++G+PPASKASI AMP V +   + ECVICLE
Sbjct: 61  VNPFTQGMIVLEGSSGMNPLLRSLLESREEGRPPASKASIDAMPIVEIDGCEGECVICLE 120

Query: 121 EIEVGGLAKEMPCTHKFHADCIEKWLELHGSCPVCRYQMPIDDEDEGKKVEDEGTERRGE 180
           E +     KEMPC H+FH  CIEKWL  HGSCPVCRY+MP+D ++ GKK       R   
Sbjct: 121 EWKSEETVKEMPCKHRFHGGCIEKWLGFHGSCPVCRYEMPVDGDEIGKK-------RNDG 180

Query: 181 REIWVSFSFENAMRNGDSVQTPSSDSDSEHS 195
            EIWV FSF +  R  D       +SD   S
Sbjct: 181 NEIWVRFSFNDGRRIRDFSAQDGGNSDGVES 202

[Close]

BLAST of Lag0040120 vs. ExPASy Swiss-Prot
Match: Q8LPN7 (E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19950 PE=1 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 5.8e-21
Identity = 50/116 (43.10%), Postives = 73/116 (62.93%), Query Frame = 0


Query: 57  FFNPFSHQLV--VIQSTP-KDGQPPASKASIKAMPSVHV------SEQTECVICLEEIEV 116
           FF P   QL+  + ++ P + G PPASK++I A+P+V V      SE  +C +C++E E 
Sbjct: 166 FFGPGLEQLIQQLAENDPNRYGTPPASKSAIDALPTVKVTKDMLKSEMNQCAVCMDEFED 225

Query: 117 GGLAKEMPCTHKFHADCIEKWLELHGSCPVCRYQMPIDDEDEGKKVEDEGTERRGE 164
           G   K+MPC H FH DC+  WLELH SCPVCR+++P DD D   +   +G++  G+
Sbjct: 226 GSDVKQMPCKHVFHQDCLLPWLELHNSCPVCRFELPTDDPDYENR--SQGSQGSGD 279

[Close]

BLAST of Lag0040120 vs. ExPASy Swiss-Prot
Match: Q6AVN2 (E3 ubiquitin-protein ligase SIRP1 OS=Oryza sativa subsp. japonica OX=39947 GN=SIRP1 PE=1 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 1.3e-20
Identity = 48/140 (34.29%), Postives = 74/140 (52.86%), Query Frame = 0


Query: 73  KDGQPPASKASIKAMPSVHVSEQTECVICLEEIEVGGLAKEMPCTHKFHADCIEKWLELH 132
           ++G PPA K +++A+P+V + E   C +CL+++EVG  AK+MPC HKFH+ CI  WLELH
Sbjct: 174 RNGTPPAKKEAVEALPTVKIEEVVSCSVCLDDLEVGSQAKQMPCEHKFHSSCILPWLELH 233

Query: 133 GSCPVCRYQMP---------------IDDEDEGKKVEDEGTERRGEREIWVSFSFENAM- 192
            SCPVCR+++P               ++D  E  + +  G         W    + N + 
Sbjct: 234 SSCPVCRFELPSEETKDLNEPSNIGRVEDSHEEVRADGPGNVSESSNRPWAIVPWLNELF 293

Query: 193 --RNGDSVQTPSSDSDSEHS 195
             R   +    S+D  S H+
Sbjct: 294 STREAQNAGGVSTDQQSPHT 313

[Close]

BLAST of Lag0040120 vs. ExPASy Swiss-Prot
Match: P0CH30 (E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum OX=3635 GN=RING1 PE=1 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 6.4e-20
Identity = 57/165 (34.55%), Postives = 86/165 (52.12%), Query Frame = 0


Query: 57  FFNPFSHQLV--VIQSTP-KDGQPPASKASIKAMPSVHV------SEQTECVICLEEIEV 116
           F  P   QL+  + ++ P + G PPASK++I+A+P V++      SE  +C +C+++ E 
Sbjct: 174 FIGPGLEQLIQQLAENDPNRYGTPPASKSAIEALPLVNITKSNLNSEFNQCAVCMDDFEE 233

Query: 117 GGLAKEMPCTHKFHADCIEKWLELHGSCPVCRYQMPIDDEDEGKKV-------------- 176
           G  AK+MPC H +H DC+  WLELH SCPVCR+++P DD D  ++V              
Sbjct: 234 GTEAKQMPCKHLYHKDCLLPWLELHNSCPVCRHELPTDDPDYERRVRGAQGTSGGNDGDN 293

Query: 177 ---EDEGTERRGEREIWVSFSFENAMRN-----GDSVQTPSSDSD 191
                +G  R  ER   +S  +    R      GD+ +T   D D
Sbjct: 294 SGQRSDGDNRTVERSFRISLPWPFQARGPGPAPGDNAETRQEDLD 338

[Close]

BLAST of Lag0040120 vs. ExPASy Swiss-Prot
Match: Q9SNB6 (E3 ubiquitin-protein ligase RDUF1 OS=Arabidopsis thaliana OX=3702 GN=RDUF1 PE=1 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 1.5e-16
Identity = 35/78 (44.87%), Postives = 50/78 (64.10%), Query Frame = 0


Query: 73  KDGQPPASKASIKAMPSVHVSE-----QTECVICLEEIEVGGLAKEMPCTHKFHADCIEK 132
           + G PPASK++I+++P V +S+     +  C +C E  E G   +EMPC H FH DCI  
Sbjct: 185 RSGNPPASKSAIESLPRVEISDCHTKAEANCAVCTEVFEAGIEGREMPCKHIFHGDCIVP 244

Query: 133 WLELHGSCPVCRYQMPID 146
           WL +  SCPVCR+++P D
Sbjct: 245 WLSIRNSCPVCRFELPSD 262

[Close]

BLAST of Lag0040120 vs. ExPASy TrEMBL
Match: A0A6J1HTX2 (E3 ubiquitin-protein ligase RING1-like OS=Cucurbita maxima OX=3661 GN=LOC111467433 PE=4 SV=1)

HSP 1 Score: 329.3 bits (843), Expect = 1.1e-86
Identity = 164/202 (81.19%), Postives = 178/202 (88.12%), Query Frame = 0


Query: 1   MASEPDPSELSSALERLLLNTDVSLIAPLFLGFATMI----PSTPNQGIQTIPTLPERFI 60
           M SEPDPSELSSALE L+LNTDVSL+AP FLGFATMI    P +PNQGI+T PTLP+RFI
Sbjct: 1   MPSEPDPSELSSALETLILNTDVSLLAPHFLGFATMIHTIAPQSPNQGIETNPTLPDRFI 60

Query: 61  FFNPFSHQLVVIQSTPKDGQPPASKASIKAMPSVHVSEQTECVICLEEIEVGGLAKEMPC 120
           FFNPF HQL++IQSTPK+ QPPASKASI AMPSVHVS QTECVICL+EIEVGG+AKEMPC
Sbjct: 61  FFNPFLHQLIMIQSTPKNSQPPASKASIIAMPSVHVSAQTECVICLDEIEVGGVAKEMPC 120

Query: 121 THKFHADCIEKWLELHGSCPVCRYQMPI-DDEDEGKKVEDEGTERRGEREIWVSFSFENA 180
            HKFH DCIEKWLELHGSCPVCRY+MP+ DDEDEGKKVEDEGTER GEREIWVSFSF+N 
Sbjct: 121 NHKFHGDCIEKWLELHGSCPVCRYEMPVDDDEDEGKKVEDEGTERMGEREIWVSFSFDNP 180

Query: 181 MRNGDSVQTPSSDSDSEHSYVQ 198
           M N DS+QTP  DSD  HSYVQ
Sbjct: 181 MGNQDSLQTPPIDSD--HSYVQ 200

[Close]

BLAST of Lag0040120 vs. ExPASy TrEMBL
Match: A0A5D3D3N1 (E3 ubiquitin-protein ligase RING1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1932G00370 PE=4 SV=1)

HSP 1 Score: 320.1 bits (819), Expect = 6.5e-84
Identity = 157/198 (79.29%), Postives = 178/198 (89.90%), Query Frame = 0


Query: 1   MASEPDPSELSSALERLLLNTDVSLIAPLFLGFATMIPSTPNQGIQTIP-TLPERFIFFN 60
           MAS PDPS++SSALERLLLN DVSLIAPLFLGFA+MI S+ N   +  P TLP+RFIFFN
Sbjct: 1   MASPPDPSDISSALERLLLNRDVSLIAPLFLGFASMIRSSQNHENEPTPTTLPDRFIFFN 60

Query: 61  PFSHQLVVIQSTPKDGQPPASKASIKAMPSVHVSEQTECVICLEEIEVGGLAKEMPCTHK 120
           PFSHQL+V+Q+TPKDGQPPASKASIKAMPS+ VSE TECVICL+EIEVGGLAK+MPC HK
Sbjct: 61  PFSHQLMVVQATPKDGQPPASKASIKAMPSLPVSEVTECVICLDEIEVGGLAKQMPCNHK 120

Query: 121 FHADCIEKWLELHGSCPVCRYQMPIDDEDEGKKVEDEGTERRGEREIWVSFSFENAMRNG 180
           FH +CI+KWLELHGSCPVCRYQMPID +DEGKKV DEGTE RGE EIWVSFSF++++RNG
Sbjct: 121 FHGECIQKWLELHGSCPVCRYQMPIDGDDEGKKVGDEGTESRGETEIWVSFSFDHSIRNG 180

Query: 181 DSVQTPSSDSDSEHSYVQ 198
           +SVQTPS+DSD  HSYVQ
Sbjct: 181 ESVQTPSTDSD--HSYVQ 196

[Close]

BLAST of Lag0040120 vs. ExPASy TrEMBL
Match: A0A1S3BFQ2 (E3 ubiquitin-protein ligase RING1-like OS=Cucumis melo OX=3656 GN=LOC103489128 PE=4 SV=1)

HSP 1 Score: 320.1 bits (819), Expect = 6.5e-84
Identity = 157/198 (79.29%), Postives = 178/198 (89.90%), Query Frame = 0


Query: 1   MASEPDPSELSSALERLLLNTDVSLIAPLFLGFATMIPSTPNQGIQTIP-TLPERFIFFN 60
           MAS PDPS++SSALERLLLN DVSLIAPLFLGFA+MI S+ N   +  P TLP+RFIFFN
Sbjct: 1   MASPPDPSDISSALERLLLNRDVSLIAPLFLGFASMIRSSQNHENEPTPTTLPDRFIFFN 60

Query: 61  PFSHQLVVIQSTPKDGQPPASKASIKAMPSVHVSEQTECVICLEEIEVGGLAKEMPCTHK 120
           PFSHQL+V+Q+TPKDGQPPASKASIKAMPS+ VSE TECVICL+EIEVGGLAK+MPC HK
Sbjct: 61  PFSHQLMVVQATPKDGQPPASKASIKAMPSLPVSEVTECVICLDEIEVGGLAKQMPCNHK 120

Query: 121 FHADCIEKWLELHGSCPVCRYQMPIDDEDEGKKVEDEGTERRGEREIWVSFSFENAMRNG 180
           FH +CI+KWLELHGSCPVCRYQMPID +DEGKKV DEGTE RGE EIWVSFSF++++RNG
Sbjct: 121 FHGECIQKWLELHGSCPVCRYQMPIDGDDEGKKVGDEGTESRGETEIWVSFSFDHSIRNG 180

Query: 181 DSVQTPSSDSDSEHSYVQ 198
           +SVQTPS+DSD  HSYVQ
Sbjct: 181 ESVQTPSTDSD--HSYVQ 196

[Close]

BLAST of Lag0040120 vs. ExPASy TrEMBL
Match: A0A0A0KU18 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G605210 PE=4 SV=1)

HSP 1 Score: 310.5 bits (794), Expect = 5.2e-81
Identity = 153/198 (77.27%), Postives = 174/198 (87.88%), Query Frame = 0


Query: 1   MASEPDPSELSSALERLLLNTDVSLIAPLFLGFATMIPSTPNQGIQTIP-TLPERFIFFN 60
           MAS PDPS+L+SALERLLLN DVSLIAPLFLGFA+M+ S+ NQ     P TLP+RFIFFN
Sbjct: 1   MASPPDPSDLASALERLLLNRDVSLIAPLFLGFASMVRSSQNQESDPTPTTLPDRFIFFN 60

Query: 61  PFSHQLVVIQSTPKDGQPPASKASIKAMPSVHVSEQTECVICLEEIEVGGLAKEMPCTHK 120
           PFSHQL+V+Q+TPK GQPPASKASIKAMPS+ VSE TECVICL+EIEVG LAK+MPC HK
Sbjct: 61  PFSHQLMVVQATPKHGQPPASKASIKAMPSLPVSEVTECVICLDEIEVGRLAKQMPCNHK 120

Query: 121 FHADCIEKWLELHGSCPVCRYQMPIDDEDEGKKVEDEGTERRGEREIWVSFSFENAMRNG 180
           FH DCI+KWLELHGSCPVCRYQMPID +DEGKKV DEG E RGE EIWVSFSF++++ NG
Sbjct: 121 FHGDCIQKWLELHGSCPVCRYQMPIDGDDEGKKVGDEGAESRGETEIWVSFSFDHSIGNG 180

Query: 181 DSVQTPSSDSDSEHSYVQ 198
           +SVQTPS++SD  HSYVQ
Sbjct: 181 ESVQTPSTESD--HSYVQ 196

[Close]

BLAST of Lag0040120 vs. ExPASy TrEMBL
Match: A0A6J1GWR8 (E3 ubiquitin-protein ligase RING1-like OS=Cucurbita moschata OX=3662 GN=LOC111458226 PE=4 SV=1)

HSP 1 Score: 305.8 bits (782), Expect = 1.3e-79
Identity = 153/202 (75.74%), Postives = 175/202 (86.63%), Query Frame = 0


Query: 1   MASEPDPSELSSALERLL-LNTDVSLIAPLFLGFATMI----PSTPNQGIQTIPTLPERF 60
           MAS+P  SELSSA E L+ +N D+S IAPLFLGFA++I    P +PN  IQTIPTLP RF
Sbjct: 1   MASDPVASELSSAFESLVFINRDISPIAPLFLGFASVIRSADPQSPNPEIQTIPTLPNRF 60

Query: 61  IFFNPFSHQLVVIQSTPKDGQPPASKASIKAMPSVHVSEQTECVICLEEIEVGGLAKEMP 120
           IFFNPF  QL+VIQ+TPK+GQPPASKASIKAMPS+ VSE TECVICLEEIE G LAK+MP
Sbjct: 61  IFFNPFPPQLMVIQATPKEGQPPASKASIKAMPSLPVSELTECVICLEEIEAGDLAKQMP 120

Query: 121 CTHKFHADCIEKWLELHGSCPVCRYQMPIDDEDEGKKVEDEGTERRGEREIWVSFSFENA 180
           C+HKFH DCIEKWLELHGSCP+CRYQMPIDDEDEGKKV++EG+ERRGEREIWVSFSF+N 
Sbjct: 121 CSHKFHGDCIEKWLELHGSCPICRYQMPIDDEDEGKKVDEEGSERRGEREIWVSFSFDNV 180

Query: 181 MRNGDSVQTPSSDSDSEHSYVQ 198
            RNG+SVQTP S + S+HS+VQ
Sbjct: 181 TRNGESVQTPPS-TYSDHSFVQ 201

The following BLAST results are available for this feature:

BLAST of Lag0040120 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022968096.1	2.2e-86	81.19	E3 ubiquitin-protein ligase RING1-like [Cucurbita maxima]	[more]
KAG7013138.1	2.5e-85	80.60	E3 ubiquitin-protein ligase RING1-like protein, partial [Cucurbita argyrosperma ...	[more]
XP_038891708.1	2.1e-84	79.80	E3 ubiquitin-protein ligase MPSR1-like [Benincasa hispida]	[more]
KAG6574079.1	2.1e-84	80.10	E3 ubiquitin-protein ligase MPSR1, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_008446365.1	1.4e-83	79.29	PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis melo] >KAA0034425.1 E...	[more]

BLAST of Lag0040120 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LQX2	1.7e-33	40.76	E3 ubiquitin-protein ligase MPSR1 OS=Arabidopsis thaliana OX=3702 GN=MPSR1 PE=1 ...	[more]
Q8LPN7	5.8e-21	43.10	E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19...	[more]
Q6AVN2	1.3e-20	34.29	E3 ubiquitin-protein ligase SIRP1 OS=Oryza sativa subsp. japonica OX=39947 GN=SI...	[more]
P0CH30	6.4e-20	34.55	E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum OX=3635 GN=RING1 PE=1 SV...	[more]
Q9SNB6	1.5e-16	44.87	E3 ubiquitin-protein ligase RDUF1 OS=Arabidopsis thaliana OX=3702 GN=RDUF1 PE=1 ...	[more]

BLAST of Lag0040120 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HTX2	1.1e-86	81.19	E3 ubiquitin-protein ligase RING1-like OS=Cucurbita maxima OX=3661 GN=LOC1114674...	[more]
A0A5D3D3N1	6.5e-84	79.29	E3 ubiquitin-protein ligase RING1-like OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A1S3BFQ2	6.5e-84	79.29	E3 ubiquitin-protein ligase RING1-like OS=Cucumis melo OX=3656 GN=LOC103489128 P...	[more]
A0A0A0KU18	5.2e-81	77.27	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G605210 P...	[more]
A0A6J1GWR8	1.3e-79	75.74	E3 ubiquitin-protein ligase RING1-like OS=Cucurbita moschata OX=3662 GN=LOC11145...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 98..138 e-value: 2.4E-7 score: 40.4
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 97..139 e-value: 2.9E-13 score: 49.9
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 98..139 score: 12.577796
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 67..145 e-value: 1.6E-21 score: 77.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 177..197
None	No IPR available	PANTHER	PTHR15710:SF132	E3 UBIQUITIN-PROTEIN LIGASE MPSR1	coord: 65..154
None	No IPR available	PANTHER	PTHR15710	E3 UBIQUITIN-PROTEIN LIGASE PRAJA	coord: 65..154
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 85..145

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0040120.1	Lag0040120.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0061630	ubiquitin protein ligase activity