Lag0039766 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTAAAACAAGAGGGAGGAGAGAAAGAGATACGGAGGAAGAGAAAGTGTCGATTACTCTTGAGGCACCGAAGACAAGAACGAAGAGAAGGAAGACATCGGAAGAGAGAGATGCCAATAGACGAAGACAACAACAGCGAGCTGAGGTTACGGAAGTAGTGAGGAAAGTGATTGAAGACATTGTTGAAGAAACGGTTGAGGAATAACAACCAAAACACCCTGAGGAAAAGAAAGATTATGAACAAGGTGAACAGACAGTTGAAAATCCGTAAGAGGGAAAAGAAAAGCTAGTAGAAGATGTGCAAGGACAAGGTAATGGTCAGGAACAACAGACTCAAGAAGTTGTGCCGGAGATTCAACGTCGTTGCCACCGCAAGCAAAAGGCGGGACAAATTAAGGTGATCAGGACATACACTCCATCTCCGTCAACGACAGAATCTGAGAAAGAAAATTATGAGAAAGAAGAGCAAGAGAAAGAAGAGGCTGAGAAAAAGGCGGAAGAAGAAGCTCAGACGAAGTAGTAAGAAGACAAGGGCAAAGGGGTTGTTGAAGTGTCGGCAAAGACAGAAGAGACTGGTGTTGAGAACCGAGACTGTCGTATGATCGCTTTGTCAATGATATTGCCCGAGAAAAATATCTGGAAATGTTGAAACGGGACTTCTTGTTTGAAAGGGGATTTGGAGAAGACTTACCGCATTTTCGTAGAGTAGGGATAACGAACCATGGATGGGAACAATTATGTGCAAAGCCAGAGTCTGTAAATTCAAATGTTGTTTGTGAATTCTACGCAAACATTGACGAAAATGAAGGCTTCCAAGCGATTGTCTGAGGGGTTGCTGCTGACTGAAGCCCAGGTGCAGTAAACTCTCTATTCAATCTTCAAGATTTCCCCCACGCTGGTTACAATGAGATGGTGGTAGCACCATCTAATGATCAACTGAATGCGGCTGTGAGAGAAGTTGAGATTGAAGGGGCTCAGTGGAGGTTGTCGAAGACAGAGAAGCGCTCTTTTCAGGCCGCATACTTGAAGAGCGAAGCAAACACCTGGTTGGGCTTTGTCAAACTCCGTTTTCTACCAACAACCCATGATTCTACAGTCTCTCGTGACAGAGTGCTTCTGGTGTTCGCAATTCTGAGGTCCCCGAGTATTGATGTTGGTAAGGTAATTTCTAGTGAAATCCACAACTGCTGGGGTAAAAAGGTGGGCAAATTATTTTTACAAAACACCATTACGATGCTGTGCAATAGGGCAGGGGTGCCCACGACTCCAAACGATATCATTTTGCTTGACAAGGGGATTATTGACACGCCCAATCTAGCGAGGCTTCAGCGGACTCAAGAAGCTCGACAAGGGGGGCTAGTGTGTGGCATGCATCAAATTCTAGAGCAACTTCAACTTTCGGCCAGTATGCAAGAGTATGCTGAGAGGCAAGCTCAGACCTACTGGACCTATGCTAAAAGATAG ATGGCTAAAACAAGAGGGAGGAGAGAAAGAGATACGGAGGAAGAGAAAGTGTCGATTACTCTTGAGGCACCGAAGACAAGAACGAAGAGAAGGAAGACATCGGAAGAGAGAGATGCCAATAGACGAAGACAACAACAGCGAGCTGAGGGAAAAGAAAAGCTAGTAGAAGATGTGCAAGGACAAGGTAATGGTCAGGAACAACAGACTCAAGAAGTTGTGCCGGAGATTCAACGTCGTTGCCACCGCAAGCAAAAGGCGGGACAAATTAAGGTGATCAGGACATACACTCCATCTCCGTCAACGACAGAATCTGAGAAAGAAAATTATGAGAAAGAAGAGCAAGAGAAAGAAGAGGCTGAGAAAAAGGCGGAAGAAGAAGCTCAGACGAAGTACCCAGGTGCAGTAAACTCTCTATTCAATCTTCAAGATTTCCCCCACGCTGGTTACAATGAGATGGTGGTAGCACCATCTAATGATCAACTGAATGCGGCTGTGAGAGAAGTTGAGATTGAAGGGGCTCAGTGGAGGTTGTCGAAGACAGAGAAGCGCTCTTTTCAGGCCGCATACTTGAAGAGCGAAGCAAACACCTGGTTGGGCTTTGTCAAACTCCGTTTTCTACCAACAACCCATGATTCTACAGTCTCTCGTGACAGAGTGCTTCTGGTGTTCGCAATTCTGAGGTCCCCGAGTATTGATGTTGGTAAGGTAATTTCTAGTGAAATCCACAACTGCTGGGGTAAAAAGGTGGGCAAATTATTTTTACAAAACACCATTACGATGCTGTGCAATAGGGCAGGGGTGCCCACGACTCCAAACGATATCATTTTGCTTGACAAGGGGATTATTGACACGCCCAATCTAGCGAGGCTTCAGCGGACTCAAGAAGCTCGACAAGGGGGGCTAGTGTGTGGCATGCATCAAATTCTAGAGCAACTTCAACTTTCGGCCAGTATGCAAGAGTATGCTGAGAGGCAAGCTCAGACCTACTGGACCTATGCTAAAAGATAG ATGGCTAAAACAAGAGGGAGGAGAGAAAGAGATACGGAGGAAGAGAAAGTGTCGATTACTCTTGAGGCACCGAAGACAAGAACGAAGAGAAGGAAGACATCGGAAGAGAGAGATGCCAATAGACGAAGACAACAACAGCGAGCTGAGGGAAAAGAAAAGCTAGTAGAAGATGTGCAAGGACAAGGTAATGGTCAGGAACAACAGACTCAAGAAGTTGTGCCGGAGATTCAACGTCGTTGCCACCGCAAGCAAAAGGCGGGACAAATTAAGGTGATCAGGACATACACTCCATCTCCGTCAACGACAGAATCTGAGAAAGAAAATTATGAGAAAGAAGAGCAAGAGAAAGAAGAGGCTGAGAAAAAGGCGGAAGAAGAAGCTCAGACGAAGTACCCAGGTGCAGTAAACTCTCTATTCAATCTTCAAGATTTCCCCCACGCTGGTTACAATGAGATGGTGGTAGCACCATCTAATGATCAACTGAATGCGGCTGTGAGAGAAGTTGAGATTGAAGGGGCTCAGTGGAGGTTGTCGAAGACAGAGAAGCGCTCTTTTCAGGCCGCATACTTGAAGAGCGAAGCAAACACCTGGTTGGGCTTTGTCAAACTCCGTTTTCTACCAACAACCCATGATTCTACAGTCTCTCGTGACAGAGTGCTTCTGGTGTTCGCAATTCTGAGGTCCCCGAGTATTGATGTTGGTAAGGTAATTTCTAGTGAAATCCACAACTGCTGGGGTAAAAAGGTGGGCAAATTATTTTTACAAAACACCATTACGATGCTGTGCAATAGGGCAGGGGTGCCCACGACTCCAAACGATATCATTTTGCTTGACAAGGGGATTATTGACACGCCCAATCTAGCGAGGCTTCAGCGGACTCAAGAAGCTCGACAAGGGGGGCTAGTGTGTGGCATGCATCAAATTCTAGAGCAACTTCAACTTTCGGCCAGTATGCAAGAGTATGCTGAGAGGCAAGCTCAGACCTACTGGACCTATGCTAAAAGATAG MAKTRGRRERDTEEEKVSITLEAPKTRTKRRKTSEERDANRRRQQQRAEGKEKLVEDVQGQGNGQEQQTQEVVPEIQRRCHRKQKAGQIKVIRTYTPSPSTTESEKENYEKEEQEKEEAEKKAEEEAQTKYPGAVNSLFNLQDFPHAGYNEMVVAPSNDQLNAAVREVEIEGAQWRLSKTEKRSFQAAYLKSEANTWLGFVKLRFLPTTHDSTVSRDRVLLVFAILRSPSIDVGKVISSEIHNCWGKKVGKLFLQNTITMLCNRAGVPTTPNDIILLDKGIIDTPNLARLQRTQEARQGGLVCGMHQILEQLQLSASMQEYAERQAQTYWTYAKR Homology
BLAST of Lag0039766 vs. NCBI nr
Match: TYH88163.1 (hypothetical protein ES332_D01G168900v1 [Gossypium tomentosum]) HSP 1 Score: 109.0 bits (271), Expect = 8.0e-20 Identity = 57/139 (41.01%), Postives = 79/139 (56.83%), Query Frame = 0
BLAST of Lag0039766 vs. NCBI nr
Match: PON78020.1 (hypothetical protein PanWU01x14_023740 [Parasponia andersonii]) HSP 1 Score: 104.0 bits (258), Expect = 2.6e-18 Identity = 73/218 (33.49%), Postives = 110/218 (50.46%), Query Frame = 0
BLAST of Lag0039766 vs. NCBI nr
Match: PON46472.1 (hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]) HSP 1 Score: 103.6 bits (257), Expect = 3.4e-18 Identity = 72/226 (31.86%), Postives = 108/226 (47.79%), Query Frame = 0
BLAST of Lag0039766 vs. NCBI nr
Match: PON35554.1 (hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]) HSP 1 Score: 100.9 bits (250), Expect = 2.2e-17 Identity = 60/162 (37.04%), Postives = 88/162 (54.32%), Query Frame = 0
BLAST of Lag0039766 vs. NCBI nr
Match: TYG37159.1 (hypothetical protein ES288_D13G120000v1 [Gossypium darwinii]) HSP 1 Score: 100.5 bits (249), Expect = 2.9e-17 Identity = 55/139 (39.57%), Postives = 74/139 (53.24%), Query Frame = 0
BLAST of Lag0039766 vs. ExPASy TrEMBL
Match: A0A5D2MA47 (Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_D01G168900v1 PE=4 SV=1) HSP 1 Score: 109.0 bits (271), Expect = 3.9e-20 Identity = 57/139 (41.01%), Postives = 79/139 (56.83%), Query Frame = 0
BLAST of Lag0039766 vs. ExPASy TrEMBL
Match: A0A2P5DXM3 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_023740 PE=4 SV=1) HSP 1 Score: 104.0 bits (258), Expect = 1.3e-18 Identity = 73/218 (33.49%), Postives = 110/218 (50.46%), Query Frame = 0
BLAST of Lag0039766 vs. ExPASy TrEMBL
Match: A0A2P5BCG4 (Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x14_251180 PE=4 SV=1) HSP 1 Score: 103.6 bits (257), Expect = 1.6e-18 Identity = 72/226 (31.86%), Postives = 108/226 (47.79%), Query Frame = 0
BLAST of Lag0039766 vs. ExPASy TrEMBL
Match: A0A2P5AGA5 (Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x14_335450 PE=4 SV=1) HSP 1 Score: 100.9 bits (250), Expect = 1.1e-17 Identity = 60/162 (37.04%), Postives = 88/162 (54.32%), Query Frame = 0
BLAST of Lag0039766 vs. ExPASy TrEMBL
Match: A0A5D1ZYC3 (Uncharacterized protein OS=Gossypium darwinii OX=34276 GN=ES288_D13G120000v1 PE=4 SV=1) HSP 1 Score: 100.5 bits (249), Expect = 1.4e-17 Identity = 55/139 (39.57%), Postives = 74/139 (53.24%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
|