Lag0039594 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0039594
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	AA_kinase domain-containing protein
Location	chr2: 46974798 .. 46975780 (+)
RNA-Seq Expression	Lag0039594
Synteny	Lag0039594

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTCGCTTCCTCCTCCTCCTCCACTCCTTTTGACCCCGATAGGTTCATTAGTAGTGTAGCCGCAGAGCAATTTGAAAAATATGTGGAGAGTAGGAACTTTATTCCTGACTGAGGTTTCAGCCCTGACCCTGAGAGGCAACCAAACTTAGTGAACAATATCGTTGCACGGGGTTGGGGTGACTTTGTTCGTCATCTTGCCCCGGGGTAGCATCCATAGTAAGGGAGTTTTATGCTAACATGGAAAAATTTCTTCTTCATCCTTTGTTCGAGGACACCATGTCCCTTATGACCCCTCACCATCAATAGATTTTATAGGCTGCCCGACTTTGAGAGGGATGACTATAGTACATACCTACATGGCCACTTAGACGTCAATGAGGTCATTCAGACGGTATGTAGGTCAGGGGTCGAATGGGCTATGACAGGAGCGGAGGTGGTGAGATTCAAGACCACTGACCTGTTTGTAGATTACAGGGCGTGGCACACTTTCCTCTGCGCCAAGTTGATGCTTGTGGCACATCTAAGCGGTGTACCAAGAGTCGTGCCATCCTCCTATTCGCTATCGCCACAGGCCGCTCGGTGAATGTCGGGCAGGTTATTCATCAGTCTATGCGCCACATCCGCCGTCGTCACACGACAATAGGGCTCGGGATCCATCACTGATCATAGCCCTTTGCGACTGCTAGTGTTGTTTGGGACGCCCAGGAGGAGTTGGTCCACCCGAGCGATTACAGACAGAATTTCATCAGTCTATACCGAGGCTCTGGACCACAGGGTGCACAACCAGCTTTCCCCATCCATGCAGAGCCAGAGCATCCTGAGCAGCTGCAGAGCCTGAGCAGTAGGAGCAGGAGGTTCCACCTCCCACCATCGAGGAGTTCAAAAGTCACCGGCTGGAGTTCTAGAGTCACCGGCTGGAGTTCCAGAGTCATCGCAGGAGCTCCAGAGTCAACAGCGCGATCACCAGAGAGAGAGGCGTAG

mRNA sequence

ATGCTCGCTTCCTCCTCCTCCTCCACTCCTTTTGACCCCGATAGCCCTGACCCTGAGAGGCAACCAAACTTAGTGAACAATATCGTTGCACGGGGTTGGGGTGACTTTGTTCGTCATCTTGCCCCGGGGCTGCCCGACTTTGAGAGGGATGACTATAGTACATACCTACATGGCCACTTAGACGTCAATGAGGTCATTCAGACGGTATGTAGGTCAGGGGTCGAATGGGCTATGACAGGAGCGGAGGTGGTGAGATTCAAGACCACTGACCTGTTTGTAGATTACAGGGCGTGGCACACTTTCCTCTGCGCCAAGTTGATGCTTGTGGCACATCTAAGCGGTGTACCAAGAGTCGTGCCATCCTCCTATTCGCTATCGCCACAGGCCGCTCGTGTTGTTTGGGACGCCCAGGAGGAGTTGGTCCACCCGAGCGATTACAGACAGAATTTCATCAGTCTATACCGAGGCTCTGGACCACAGGGTGCACAACCAGCTTTCCCCATCCATGCAGAGCCAGAGCATCCTGAGCAGCTGCAGAGCCTGAGCAGTAGGAGCAGGAGGTTCCACCTCCCACCATCGAGGAGTTCAAAAGTCACCGGCTGGAGTTCTAGAGTCACCGGCTGGAGTTCCAGAGTCATCGCAGGAGCTCCAGAGTCAACAGCGCGATCACCAGAGAGAGAGGCGTAG

Coding sequence (CDS)

ATGCTCGCTTCCTCCTCCTCCTCCACTCCTTTTGACCCCGATAGCCCTGACCCTGAGAGGCAACCAAACTTAGTGAACAATATCGTTGCACGGGGTTGGGGTGACTTTGTTCGTCATCTTGCCCCGGGGCTGCCCGACTTTGAGAGGGATGACTATAGTACATACCTACATGGCCACTTAGACGTCAATGAGGTCATTCAGACGGTATGTAGGTCAGGGGTCGAATGGGCTATGACAGGAGCGGAGGTGGTGAGATTCAAGACCACTGACCTGTTTGTAGATTACAGGGCGTGGCACACTTTCCTCTGCGCCAAGTTGATGCTTGTGGCACATCTAAGCGGTGTACCAAGAGTCGTGCCATCCTCCTATTCGCTATCGCCACAGGCCGCTCGTGTTGTTTGGGACGCCCAGGAGGAGTTGGTCCACCCGAGCGATTACAGACAGAATTTCATCAGTCTATACCGAGGCTCTGGACCACAGGGTGCACAACCAGCTTTCCCCATCCATGCAGAGCCAGAGCATCCTGAGCAGCTGCAGAGCCTGAGCAGTAGGAGCAGGAGGTTCCACCTCCCACCATCGAGGAGTTCAAAAGTCACCGGCTGGAGTTCTAGAGTCACCGGCTGGAGTTCCAGAGTCATCGCAGGAGCTCCAGAGTCAACAGCGCGATCACCAGAGAGAGAGGCGTAG

Protein sequence

MLASSSSSTPFDPDSPDPERQPNLVNNIVARGWGDFVRHLAPGLPDFERDDYSTYLHGHLDVNEVIQTVCRSGVEWAMTGAEVVRFKTTDLFVDYRAWHTFLCAKLMLVAHLSGVPRVVPSSYSLSPQAARVVWDAQEELVHPSDYRQNFISLYRGSGPQGAQPAFPIHAEPEHPEQLQSLSSRSRRFHLPPSRSSKVTGWSSRVTGWSSRVIAGAPESTARSPEREA

Homology

[Close]

BLAST of Lag0039594 vs. NCBI nr
Match: KGN46897.1 (hypothetical protein Csa_020731 [Cucumis sativus])

HSP 1 Score: 94.7 bits (234), Expect = 1.1e-15
Identity = 51/154 (33.12%), Postives = 72/154 (46.75%), Query Frame = 0


Query: 2   LASSSSSTPFDPDSPDPERQPNLVNNIVARGWGDFVRHLAPG------------------ 61
           L   SS  P    +P    QP L  NI+ RGW DFV+   P                   
Sbjct: 36  LVVKSSVIPERGLAPCEVHQPQLFQNIMQRGWSDFVKQPEPAVLSIVREFYANMVEGSSR 95

Query: 62  --------------------LPDFERDDYSTYLHGHLDVNEVIQTVCRSGVEWAMTGAEV 118
                               LP+FERD+Y  Y   H+DV+++I+ +C+ G EW +   E 
Sbjct: 96  SFVRGRQVSFDYGTINRYYHLPNFERDEYDIYASEHVDVHQIIRELCQPGAEWVINPGEP 155

[Close]

BLAST of Lag0039594 vs. NCBI nr
Match: KAA0033353.1 (putative S-locus lectin protein kinase family protein [Cucumis melo var. makuwa] >TYJ96637.1 putative S-locus lectin protein kinase family protein [Cucumis melo var. makuwa])

HSP 1 Score: 94.0 bits (232), Expect = 1.8e-15
Identity = 50/150 (33.33%), Postives = 72/150 (48.00%), Query Frame = 0


Query: 6   SSSTPFDPDSPDPERQPNLVNNIVARGWGDFVRHLAPG---------------------- 65
           SS  P    +P    QP L  NI+ RGW DFV+   P                       
Sbjct: 40  SSVIPERGLAPCEVHQPQLYQNIMQRGWSDFVKQPEPAVVSIVREFYANMVEGSSRSFVR 99

Query: 66  ----------------LPDFERDDYSTYLHGHLDVNEVIQTVCRSGVEWAMTGAEVVRFK 118
                           LP+FERD+Y+ Y   H+DV+++I+ +C+ G EW +   E +RFK
Sbjct: 100 GRQVSFDYGTINRYYHLPNFERDEYAIYASEHVDVHQIIRELCQPGAEWIINPGEPIRFK 159

[Close]

BLAST of Lag0039594 vs. NCBI nr
Match: XP_008458668.1 (PREDICTED: uncharacterized protein LOC103497996 [Cucumis melo])

HSP 1 Score: 85.9 bits (211), Expect = 5.0e-13
Identity = 34/74 (45.95%), Postives = 53/74 (71.62%), Query Frame = 0


Query: 44  LPDFERDDYSTYLHGHLDVNEVIQTVCRSGVEWAMTGAEVVRFKTTDLFVDYRAWHTFLC 103
           LP+FERD+Y+ Y   H+DV+++I+ +C+ G EW +   E +RFK+++L V  + WH F+C
Sbjct: 54  LPNFERDEYAIYASEHVDVHQIIRELCQPGAEWIINPGEPIRFKSSNLTVSNQVWHKFIC 113

Query: 104 AKLMLVAHLSGVPR 118
           AKL+ VAH S V +
Sbjct: 114 AKLLPVAHTSSVTK 127

[Close]

BLAST of Lag0039594 vs. NCBI nr
Match: EOY13933.1 (Uncharacterized protein TCM_032752 [Theobroma cacao])

HSP 1 Score: 61.6 bits (148), Expect = 1.0e-05
Identity = 26/73 (35.62%), Postives = 41/73 (56.16%), Query Frame = 0


Query: 45  PDFERDDYSTYLHGHLDVNEVIQTVCRSGVEWAMTGAEVVRFKTTDLFVDYRAWHTFLCA 104
           P+ E D+Y  YL  H D NE+I T+C  G +W  +  E V FK + +  + + W  F+ A
Sbjct: 113 PNIENDEYGQYLGDHQDCNEIISTLCIEGAQWKTSHGEPVSFKRSVMKKELKVWLHFVAA 172

Query: 105 KLMLVAHLSGVPR 118
           +L+   H+S V +
Sbjct: 173 RLLPSTHISDVTK 185

[Close]

BLAST of Lag0039594 vs. NCBI nr
Match: EOY08969.1 (Uncharacterized protein TCM_024271 [Theobroma cacao])

HSP 1 Score: 60.8 bits (146), Expect = 1.7e-05
Identity = 36/134 (26.87%), Postives = 58/134 (43.28%), Query Frame = 0


Query: 46  DFERDDYSTYLHGHLDVNEVIQTVCRSGVEWAMTGAEVVRFKTTDLFVDYRAWHTFLCAK 105
           D E D+Y  +++G ++++EV++++   G EW +    V+ FK   +  DY+ W+ F+  K
Sbjct: 32  DIENDEYDQFVNGDINLDEVLRSLSILGTEWQVHKGVVISFKANAMDNDYKVWYHFVAMK 91

Query: 106 LMLVAHLSGVPR------------------------------------VVPSSYSLSPQA 144
           L+LV +LS V +                                      PS  +     
Sbjct: 92  LLLVKYLSDVTKDRAILLYAIVTKKFIDIGQLIFKNIIMSARSPPNGLWYPSLITALCCQ 151

[Close]

BLAST of Lag0039594 vs. ExPASy TrEMBL
Match: A0A0A0KER1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G149380 PE=4 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 5.2e-16
Identity = 51/154 (33.12%), Postives = 72/154 (46.75%), Query Frame = 0


Query: 2   LASSSSSTPFDPDSPDPERQPNLVNNIVARGWGDFVRHLAPG------------------ 61
           L   SS  P    +P    QP L  NI+ RGW DFV+   P                   
Sbjct: 36  LVVKSSVIPERGLAPCEVHQPQLFQNIMQRGWSDFVKQPEPAVLSIVREFYANMVEGSSR 95

Query: 62  --------------------LPDFERDDYSTYLHGHLDVNEVIQTVCRSGVEWAMTGAEV 118
                               LP+FERD+Y  Y   H+DV+++I+ +C+ G EW +   E 
Sbjct: 96  SFVRGRQVSFDYGTINRYYHLPNFERDEYDIYASEHVDVHQIIRELCQPGAEWVINPGEP 155

[Close]

BLAST of Lag0039594 vs. ExPASy TrEMBL
Match: A0A5D3BBY3 (Putative S-locus lectin protein kinase family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold26G00020 PE=4 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 8.8e-16
Identity = 50/150 (33.33%), Postives = 72/150 (48.00%), Query Frame = 0


Query: 6   SSSTPFDPDSPDPERQPNLVNNIVARGWGDFVRHLAPG---------------------- 65
           SS  P    +P    QP L  NI+ RGW DFV+   P                       
Sbjct: 40  SSVIPERGLAPCEVHQPQLYQNIMQRGWSDFVKQPEPAVVSIVREFYANMVEGSSRSFVR 99

Query: 66  ----------------LPDFERDDYSTYLHGHLDVNEVIQTVCRSGVEWAMTGAEVVRFK 118
                           LP+FERD+Y+ Y   H+DV+++I+ +C+ G EW +   E +RFK
Sbjct: 100 GRQVSFDYGTINRYYHLPNFERDEYAIYASEHVDVHQIIRELCQPGAEWIINPGEPIRFK 159

[Close]

BLAST of Lag0039594 vs. ExPASy TrEMBL
Match: A0A1S3C7Y0 (uncharacterized protein LOC103497996 OS=Cucumis melo OX=3656 GN=LOC103497996 PE=4 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 2.4e-13
Identity = 34/74 (45.95%), Postives = 53/74 (71.62%), Query Frame = 0


Query: 44  LPDFERDDYSTYLHGHLDVNEVIQTVCRSGVEWAMTGAEVVRFKTTDLFVDYRAWHTFLC 103
           LP+FERD+Y+ Y   H+DV+++I+ +C+ G EW +   E +RFK+++L V  + WH F+C
Sbjct: 54  LPNFERDEYAIYASEHVDVHQIIRELCQPGAEWIINPGEPIRFKSSNLTVSNQVWHKFIC 113

Query: 104 AKLMLVAHLSGVPR 118
           AKL+ VAH S V +
Sbjct: 114 AKLLPVAHTSSVTK 127

[Close]

BLAST of Lag0039594 vs. ExPASy TrEMBL
Match: A0A061FAJ6 (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_032752 PE=4 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 4.9e-06
Identity = 26/73 (35.62%), Postives = 41/73 (56.16%), Query Frame = 0


Query: 45  PDFERDDYSTYLHGHLDVNEVIQTVCRSGVEWAMTGAEVVRFKTTDLFVDYRAWHTFLCA 104
           P+ E D+Y  YL  H D NE+I T+C  G +W  +  E V FK + +  + + W  F+ A
Sbjct: 113 PNIENDEYGQYLGDHQDCNEIISTLCIEGAQWKTSHGEPVSFKRSVMKKELKVWLHFVAA 172

Query: 105 KLMLVAHLSGVPR 118
           +L+   H+S V +
Sbjct: 173 RLLPSTHISDVTK 185

[Close]

BLAST of Lag0039594 vs. ExPASy TrEMBL
Match: A0A061F366 (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_024271 PE=4 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 8.3e-06
Identity = 36/134 (26.87%), Postives = 58/134 (43.28%), Query Frame = 0


Query: 46  DFERDDYSTYLHGHLDVNEVIQTVCRSGVEWAMTGAEVVRFKTTDLFVDYRAWHTFLCAK 105
           D E D+Y  +++G ++++EV++++   G EW +    V+ FK   +  DY+ W+ F+  K
Sbjct: 32  DIENDEYDQFVNGDINLDEVLRSLSILGTEWQVHKGVVISFKANAMDNDYKVWYHFVAMK 91

Query: 106 LMLVAHLSGVPR------------------------------------VVPSSYSLSPQA 144
           L+LV +LS V +                                      PS  +     
Sbjct: 92  LLLVKYLSDVTKDRAILLYAIVTKKFIDIGQLIFKNIIMSARSPPNGLWYPSLITALCCQ 151

The following BLAST results are available for this feature:

BLAST of Lag0039594 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN46897.1	1.1e-15	33.12	hypothetical protein Csa_020731 [Cucumis sativus]	[more]
KAA0033353.1	1.8e-15	33.33	putative S-locus lectin protein kinase family protein [Cucumis melo var. makuwa]...	[more]
XP_008458668.1	5.0e-13	45.95	PREDICTED: uncharacterized protein LOC103497996 [Cucumis melo]	[more]
EOY13933.1	1.0e-05	35.62	Uncharacterized protein TCM_032752 [Theobroma cacao]	[more]
EOY08969.1	1.7e-05	26.87	Uncharacterized protein TCM_024271 [Theobroma cacao]	[more]

BLAST of Lag0039594 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Lag0039594 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KER1	5.2e-16	33.12	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G149380 PE=4 SV=1	[more]
A0A5D3BBY3	8.8e-16	33.33	Putative S-locus lectin protein kinase family protein OS=Cucumis melo var. makuw...	[more]
A0A1S3C7Y0	2.4e-13	45.95	uncharacterized protein LOC103497996 OS=Cucumis melo OX=3656 GN=LOC103497996 PE=...	[more]
A0A061FAJ6	4.9e-06	35.62	Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_032752 PE=4 SV=1	[more]
A0A061F366	8.3e-06	26.87	Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_024271 PE=4 SV=1	[more]

BLAST of Lag0039594 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 174..203
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..22

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0039594.1	Lag0039594.1	mRNA