Lag0039369 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0039369
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionGlycerophosphodiester phosphodiesterase
Locationchr2: 42306797 .. 42313087 (-)
RNA-Seq ExpressionLag0039369
SyntenyLag0039369
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTGTCCATTGCTGGAGGAGGTGCTTTTGAATCTCCCTTTTAGTGAAAGGGGCAAAGTCCTGTGGCAAGCTAGCTTCTTTGCTGTTTTGTAGGGTATTTGGTTGGAATTTGGAAAGAAACAATAGAATTTCTAGAGAGGTTGAGAGATTGGGTGAGGAGGTGACTAGGTTTAATGCCTCCCTAAAAATATATAAGTGAAAAGTCAAAATGGTATTGTGTAATTCCTGTTAGAGATATTGTGGGAGTTTTGTCTAGAAAAGAGAACTTCTCTTAGAGGTTGCTAAAGGGGGGATATGTAGGAACTAATTATTTCTATTTCTTCTTCTTGGAGCACTCTCTATCATGATTTTTGTGATTATAGTCTTTCTTGAATTTCCTCCAATTAGAGAGGGTTGACTCCTTTCACTTGTTGGCTCCTCCATATTTCATTCTTCCAGTGTAATATTTCTTATCGTCTAGTTCTATATATGAAAATATTTCTTTTATTGCTCTTTGTTAACATTATTCTGTAGTTTTTTGATTGTAGATAAAAGATCTTGGTGCTGTTTATCAACACACTCATAAATTGCTGGATTTCAACATTCCTACAATTGAAGAAGCTTTGGCGGTATGCTGTAGGATATATGCTCTCTTAGTATGAATGCATTGAGTACAGTTTAATACTTATCTGATCCCGCCTGCAAAATTCCAGTCTGATATTTCTTAGTTTATTCTTTCGAAGTCGGTTATTATTCTCTTGTATTTGTGCAGTTAATATCAAAATCAGTTCAGCAGGTGATTCTAGATGCAAAGGTTGGACCACCGTCATATGAAAATGGGCTTGCAAAAGATATAATTTCTGTTGTGAGTTTTTCTCTTCTTTCTCTTTTTTCTGCACAATAATCTACTAAAGACATTATCTAAATATGTTAATCCAAGTTCTTGTTTTTGTGGAGTTTATGTAAAATATATGGTTGTTCTACGACCTTACTTGAACATGATCTGTTCTATAGGTTGTACAACCGTGTCCTTGATTTCTAAAAGGAATAAAAGTTTGTCCTTGTTGTGGTTGTTTACTTGAATAGTACAAGCAATTTTAGAATTAACCGTATACCTAACAGTTGCAATATTTAGCCTTAATCTTTATATCATCTTAGCTTTAAATCTGTGATCTTTATTGTCTCTTCCTCCGGAACTGAACAAAGCACAGTTTTAGTTGATGCCATGCTATTATGTATTAGTGCGAAGGAATTGTGGGCGTATTCAAGAGGGGAAGCTCTCAGTTCATGTAGGATCTGGGGCTGTAGCTTGGTTGAGAGATGGGCCAATAATGTCAGTGGCAGTAGTGAGGCAATGAACTTCCTCCAGAAGAGGAGACTAGTATATGTGTTAAAACGTATTCATGTTTTCATCAAACACTGGAGAAGTTTTTTGTATGGTTTTTGTGGAGCCATTCCAAGGTAGAAGATCGACCCTTTCATACTTGCAAGAAGAAATGGTGAGGGGTGGTGGCCTGTAAAATGGAGTTCATTTTCTCCCTAGTTCTAATAACTGAAGATGCTGCTAAAAAACTAGCTTTCATCATCCTTTGTGTGATGGTGTGCATTCTAATAGGAATGCTATTAGGAGAGAATTAGGAATAGTATTAGAGTATTACGGGTATATTAGTAATTAGTTAAGGAAGTTGTTATGGTGAATTGTTATAAAAAGAGGGGGTGGGAAAGAGTGGAGGCAGACTATTGTTGAGTGGTTATAGGCTTGAATGGCATCTCAAGAGAGGAGAAACACAAAGTACCTCATATACTTGGGAAGTTGTATTTTAATTCTATTATCTTTTATATTTCAATATATTTGGGTTCTATCACATTCATGCAGAGTCTAAGGAGAGTGCTACTGGAGTGTGTATTGGATTATATTTGTGATGTCAGAAATGGCGTTTGTCACTAGGAGGAAGTGGTGAGATCCATTGTACGAGATCAAATAAGGTCTGGTGGTGTATTTCAAGTTATTGGTTGTACTAAAGTCATTCCGAGATAATTTAGCAATTGGAATCTACAGTGATAGGAAAAATTACGTGTGAATTTTGCGAGTTTGGTGGATATTCTGTGTTGATCAATAGCGGGATTCAAAGGTGGTGGTGGAAATGTGTCAATTAGCATTCTTAAAGGCCTAGGTTACAATCTTTGATGTGCCTCCTCATTTGAGATGGAAGGGTGTTCTTCTAAAACTAGTGGAGGTGTGGAGTAGGAGAGAAGTGCAGTTTTAGCTAAGCAGGCTGGATGAAGGATGTTTGTTTTCTTGGACAAGGAGAGGCTAGCCTTTTCTTTTCTAGATGTTTACTTTCTGGTCAAAACACCTGTTTTCTGATACTTTTTTTTTGGGGGGGGGGGGGGGGGTAAAGGGATGGCAAGAGGTCTGATTGTTGTTGATAACTTGACGATCAGCCGGTTAGATAGAGAAGATAAATGTGTGATATTATTTAAGAGTGGGCCAACTTCCTTTTCAAGAAGATTCAGATGGTGCTTTTTAGCTACATTGGAAATGGTAAAATTATCTCAATTGGTTTAGCGAGCTTTTTGGTTTTATTGATTTCAAATTGCAGTCCTCATTAGAAATTTGCTAATCAGGAATCTCTTGAGGTGTCTTTTCTTCAAGAGACTAAATAAATGGACTTCTTGAAAGGTCTCATTTTACTTGGAGCCCCTTTTATAGTTTGGCTCCCTTTTTTGTGAGTTTTGTTTTTTGCATGCCCTTGTACTATTTCATTTTTTTCCCTCAAAGTTCAGTTATTCATAGAAGAAAAGAAAAAGGGCCTCTCGTCCTGTCTCATTGGTTAGAAGCATAAAGAGGATATATATTTATATATATAATTTTCTTGGGAGTGGTAGGAGTTAGAGGCATAGGGTTTTTCTGGAGGTATTATTATTATGTGCAATTACCATTCTCTGTCTGTTCAAGATTTGGTGCATGAGTTATTTTTTATTTCTATTCAGTTCTCCAATCAAGACTATGTAAGGCCCCAAATTGTGAAGCTCACAGTCAACTCTTCATTACTTATTCTTTCGCTAGATCCTTTTGGGCTTTCATGTTTCATCACACGGGTTTTTGGTTGGTTGATGGTATTACCTAATGATATGTGGTCTCTTCTAAATATCACTCTGCTTGAGCACCCATTCAAGACCGAGAAGGTGACTCTTTGGTGCAACTCCATCCGGAATCTTTTATGGTCATTATGGCTCGATAGGCATTCACACATTTTCTCAGACAAACCAGGATTTTGAATGTTTTACATTTTTTGTTACTTTTACTGCTCTAACATGGTGTAAATTGGTTTCTCCTTTTTATACTTATGGTTTAAGTTCTTTTATAGCCGATTGGAGAAGTTTCTTGTAATCCTCTAGATTGGTCTTTCATTTTTGTTCTTATCATTTCATTTTTCTTTTTCTTTTCAGTATTTATTTATTTTTAAATAAACCAAGCTTTCATTTGATCAATGAAATTTATAGTTGCCTATCCCCCCCCCCCCCCCCCCCCCCCAAAAAAAAAAAAAGTGAAGACTTATTGTAGGATGGGTAAAAAGGGAATTGTGTTATGATAGTGTACGGAAGGAGAGGAATGTTATTATGTTGAGGGTAGAAGCGTATAGGATTTTTTTAAATTTTTTATTTTTTTTTTTGTGAAAAGTTTGGATGAGTGTTTGGACAGGCGAGGTTTACAACTCTCTTGAATGAGCTGGTGGTTTGCTTCTTTTATTAACTTTGCTGTTGGTTGTGTTCTTGGTTGATTGTTGTGTTTGTGTTCTTTTTTGTAGGTGTTATTTTGAGGTGGATTCCTAACTGACTACCAAACCTTTAAGCTCTATGACCCTCCAAAGTACAGGGAATGAGATGGCTTTTGGGTTGATTAAGTGATTTTTTTGATCCTTGTGGGCTGCTTGGGTGCTTGTTTAAAGCTAACATTGCGAGACTTGTAGAAAATTATTGTGAGAAGATGTAAGGGAGAGGGTGGTTCTCGTTCAGTCAGTTGGGAGTTGGTGTCCAGATTATGTGGCGAGGGGGCTGAGAATTTTCAGGCAAGAATATGCTCTTATTTCCAAATGATTGCAACATCTTTTTCTAGAGCCTTAAGTTTTACAGCACCCAACAGGTTTGAATTATAATAGTTGATACAGTCTGGTTTGGTCATATAGGCAGATTTTTGGGATCTATGTTGTTCCGTAGCTTAAGTGTCGTGCTATGATGAAGTCACTATGCACTGGTGGTTTCGTGGGAGAGGAAGATTGTTGTTTCAGCCTGCTTTTTGGTTGAAGGAAAGTAGGAGGTATTTTGGTTTCTGAGTAGCCTTTTGTTGGTGGGGCCGTTGTCTTTTCCTAGCCATCTGTTATCGAGATATCAAACATGAGAGAATCCAATATCTTTTCTATACACTTGAGCCAATTATATATAGGCGTACATAGAAGCCCTAAACAAATAATGGTAAAATTACAATAAAGGACGAAGACTAATAAGCTACGATATTTACATATATACCTATAACACCATCCATTAAAAAAAAAAAACAGGGAAGCAACAACAAAAGAAAAGAAAAAGAAGCAAGCAAGTGTGCAAAGTTATTGTTTTGAGGCCAACGTTTTAAAAGGCTAAAGGCGGCCTTGAGGCTTTTTCTCTTGAAGAGCCGAGGCGCAAGCCTCGAGGGGTATGAGGTGCAAGTCTCAATTTTAATTAAAAACATTACACAAATCCTAAATTGTGTGAACAAGTATGCTAAACATAATACTTATATAATAAAAGTTAAAAAAAGAAAGTGACCTTGAATTGCTACTTGAACAAAAATTCTACAAGTATATCTTACTATTATCATTGACAGGATTGACCTATTCTATAAAATTTTATTTCAATGTTTTTAAAGCCTAAGTGGTAAAAGTAGTAACATTTCAAATGGTTACAACTCAAACCTTTATAATTTTAAAGAAGGAAGAAATTAATAGTATTCTTCTAACCTTTATACAAAGCGTAGAGACTTTAGGCCTCAATACGTTTTTACAAAGGCGTAAGCCTCTTATGCTCCAAAGAAGGTTTAAGTCTCGAGGCTAAAAGTTAGAGCTTTGCCTCGAGGCGATCCTCAAGGCCTAAGCCTCAATAGCCTTTTAAAACATTGTTCGAGGCAAACTGCCTTGCTTTCCTTCTCATTTGTTTGATTTAGGCTCAGGTAGTTTCTCATATCTTGTATCCTAATGGTTGTTTATTTGCAAAATTTCAGGTTGAGAAGACACAATGTAAGAATTGTCTCGTATGGGCGAAGAGTGATAGCTTAGCAAGGGACATAATCAGATTATCATCAAATATCAAGGTGAATAAAAACTGGTTTTATTGTGCAATATCTCTTTCTGCTATCTTGCAATGCCAAGTTTGGGAATTATATTTTATAATTAAAAAATAAAGGTCCCAGATTTAATTTTAAGGCTGCAGGATTACAGCGAAACCGACTTACCATTATTTAAATTAAACCTAGTGGGCAGTTCACTTTTTTGAGTGCTAATGTTGCGTAGATTTGTCTGGCTAAACCTCTTCTGCATTCAGTTAGCAAACTGTGTTTCACCGGATTTACAATATGTTTCCATCTGATGCTGGCTCAGCTAAGGACATTGACTTGATGTAATTGGGATGTTTATTGAAATGAATCTCCTCCTAAATTCTTGCTACTGAGCTTTTTTCTGAAAATTTATAGAGCTCGGCAGCTCGCTTGATTTATCTTATGCATTAAGAGCTGGATTTTAAATACTTGAATCTGTAAATTGTGTGTGGTTCTTTTACATATGTCAAACAGAGATTCCCTTCAATTTATAACTAGAGAGAATTTGGTTTGAACTGTGGAGATTTGAAATGTTTGAACATTTTATAGAAAGCATATGTTTTACTTGCAGGTGGGGTACATCGTAATGAAGGACCCATCTACAGGGGAAAGAACCAACTTACTGAGAATGAAAGGAGCCAAAGTGGTTGGTACCTATCATCCATTGATTGATGAAAAGCTTATGCGAATAGTGCACAGGTATTGCTTCTATTTGGTGCGTTAATGTTCAAAAGATAGTCAATTGGAATTTGCATTGTAGAATCGAGCTAACACTTTTCATTTAACAGGAGGGATAAAAAGGTGTATGCCTGGACAGTTGATGATATCGATTCGATGAAGAGAATGTTAGCCGAGGGAGTAGATGCTGTCGTTACGAGCAACCCATCATTACTTGGAAGTGTAATGCAAGATATCAGAACTACATGCCTTGAGAATGGTTTTTCACTTTCATCATGA

mRNA sequence

ATGGTTGTCCATTGCTGGAGGAGGGTATTTGGTTGGAATTTGGAAAGAAACAATAGAATTTCTAGAGAGGTTGAGAGATTGGGTGAGGAGATAAAAGATCTTGGTGCTGTTTATCAACACACTCATAAATTGCTGGATTTCAACATTCCTACAATTGAAGAAGCTTTGGCGTTAATATCAAAATCAGTTCAGCAGGTGATTCTAGATGCAAAGGTTGGACCACCGTCATATGAAAATGGGCTTGCAAAAGATATAATTTCTGTTGTTGAGAAGACACAATGTAAGAATTGTCTCGTATGGGCGAAGAGTGATAGCTTAGCAAGGGACATAATCAGATTATCATCAAATATCAAGGTGGGGTACATCGTAATGAAGGACCCATCTACAGGGGAAAGAACCAACTTACTGAGAATGAAAGGAGCCAAAGTGGTTGGTACCTATCATCCATTGATTGATGAAAAGCTTATGCGAATAGTGCACAGGAGGGATAAAAAGGTGTATGCCTGGACAGTTGATGATATCGATTCGATGAAGAGAATGTTAGCCGAGGGAGTAGATGCTGTCGTTACGAGCAACCCATCATTACTTGGAAGTGTAATGCAAGATATCAGAACTACATGCCTTGAGAATGGTTTTTCACTTTCATCATGA

Coding sequence (CDS)

ATGGTTGTCCATTGCTGGAGGAGGGTATTTGGTTGGAATTTGGAAAGAAACAATAGAATTTCTAGAGAGGTTGAGAGATTGGGTGAGGAGATAAAAGATCTTGGTGCTGTTTATCAACACACTCATAAATTGCTGGATTTCAACATTCCTACAATTGAAGAAGCTTTGGCGTTAATATCAAAATCAGTTCAGCAGGTGATTCTAGATGCAAAGGTTGGACCACCGTCATATGAAAATGGGCTTGCAAAAGATATAATTTCTGTTGTTGAGAAGACACAATGTAAGAATTGTCTCGTATGGGCGAAGAGTGATAGCTTAGCAAGGGACATAATCAGATTATCATCAAATATCAAGGTGGGGTACATCGTAATGAAGGACCCATCTACAGGGGAAAGAACCAACTTACTGAGAATGAAAGGAGCCAAAGTGGTTGGTACCTATCATCCATTGATTGATGAAAAGCTTATGCGAATAGTGCACAGGAGGGATAAAAAGGTGTATGCCTGGACAGTTGATGATATCGATTCGATGAAGAGAATGTTAGCCGAGGGAGTAGATGCTGTCGTTACGAGCAACCCATCATTACTTGGAAGTGTAATGCAAGATATCAGAACTACATGCCTTGAGAATGGTTTTTCACTTTCATCATGA

Protein sequence

MVVHCWRRVFGWNLERNNRISREVERLGEEIKDLGAVYQHTHKLLDFNIPTIEEALALISKSVQQVILDAKVGPPSYENGLAKDIISVVEKTQCKNCLVWAKSDSLARDIIRLSSNIKVGYIVMKDPSTGERTNLLRMKGAKVVGTYHPLIDEKLMRIVHRRDKKVYAWTVDDIDSMKRMLAEGVDAVVTSNPSLLGSVMQDIRTTCLENGFSLSS
Homology
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BLAST of Lag0039369 vs. NCBI nr
Match: KAA0039349.1 (glycerophosphodiester phosphodiesterase GDPD4 isoform X2 [Cucumis melo var. makuwa] >TYK00532.1 glycerophosphodiester phosphodiesterase GDPD4 isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 344.4 bits (882), Expect = 7.3e-91
Identity = 176/210 (83.81%), Postives = 187/210 (89.05%), Query Frame = 0 

Query: 7   RRVFGWNLERNNRISREVERLGEEIKDLGAVYQHTHKLLDFNIPTIEEALALISKSVQQV 66
           +R+ G N  +    SR      +EIK+L AVYQHTHKLLDFNIPTIEEAL LISKSVQQV
Sbjct: 125 QRITGSNTSKVGNYSR------KEIKNLVAVYQHTHKLLDFNIPTIEEALGLISKSVQQV 184

Query: 67  ILDAKVGPPSYENGLAKDIISVVEKTQCKNCLVWAKSDSLARDIIRLSSNIKVGYIVMKD 126
           ILDAKVGPPSYENGLAKDIISVVEKTQCKNCLVWAKSDSLARDIIR S +IKVGYIVMKD
Sbjct: 185 ILDAKVGPPSYENGLAKDIISVVEKTQCKNCLVWAKSDSLARDIIRSSLDIKVGYIVMKD 244

Query: 127 PSTGERTNLLRMKGAKVVGTYHPLIDEKLMRIVHRRDKKVYAWTVDDIDSMKRMLAEGVD 186
           PSTGERTNLLRMKGAKVVG YHPLID  LMRI+HRRD+KVYAWTVDDI+SMKRML EGVD
Sbjct: 245 PSTGERTNLLRMKGAKVVGVYHPLIDGDLMRILHRRDRKVYAWTVDDIESMKRMLVEGVD 304

Query: 187 AVVTSNPSLLGSVMQDIRTTCLENGFSLSS 217
           AVVTSNP+LLGSVMQD RTTCLENGFS+SS
Sbjct: 305 AVVTSNPTLLGSVMQDTRTTCLENGFSISS 328

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BLAST of Lag0039369 vs. NCBI nr
Match: XP_022974073.1 (glycerophosphodiester phosphodiesterase GDPD4 [Cucurbita maxima])

HSP 1 Score: 343.2 bits (879), Expect = 1.6e-90
Identity = 172/210 (81.90%), Postives = 188/210 (89.52%), Query Frame = 0 

Query: 7   RRVFGWNLERNNRISREVERLGEEIKDLGAVYQHTHKLLDFNIPTIEEALALISKSVQQV 66
           +R+ G N+ +    S       +EIK+LGA YQHT+KLLDFNIPTIEEAL LISKSV+QV
Sbjct: 125 QRITGSNISQVGNFSM------KEIKNLGAFYQHTNKLLDFNIPTIEEALVLISKSVKQV 184

Query: 67  ILDAKVGPPSYENGLAKDIISVVEKTQCKNCLVWAKSDSLARDIIRLSSNIKVGYIVMKD 126
           ILDAK+GPPSYENGLAKDIISVVEKTQCKNCLVWAKSDSL RDII+LSS++KVGYIVM D
Sbjct: 185 ILDAKIGPPSYENGLAKDIISVVEKTQCKNCLVWAKSDSLVRDIIKLSSDMKVGYIVMMD 244

Query: 127 PSTGERTNLLRMKGAKVVGTYHPLIDEKLMRIVHRRDKKVYAWTVDDIDSMKRMLAEGVD 186
           PSTGERTNLLRMKGAKVVG YHPLIDE LMR++HRRDKKVYAWTVDD+DSMKRML EGVD
Sbjct: 245 PSTGERTNLLRMKGAKVVGAYHPLIDEDLMRMMHRRDKKVYAWTVDDVDSMKRMLVEGVD 304

Query: 187 AVVTSNPSLLGSVMQDIRTTCLENGFSLSS 217
           AVVTSNP+LLGSVMQDIRTTCLENGFSL S
Sbjct: 305 AVVTSNPTLLGSVMQDIRTTCLENGFSLPS 328

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BLAST of Lag0039369 vs. NCBI nr
Match: XP_008459511.1 (PREDICTED: glycerophosphodiester phosphodiesterase GDPD4 isoform X2 [Cucumis melo])

HSP 1 Score: 342.8 bits (878), Expect = 2.1e-90
Identity = 175/210 (83.33%), Postives = 187/210 (89.05%), Query Frame = 0 

Query: 7   RRVFGWNLERNNRISREVERLGEEIKDLGAVYQHTHKLLDFNIPTIEEALALISKSVQQV 66
           +R+ G N  +    SR      +EIK+L AVYQHTHKLLDFNIPTIEEAL LISKSVQQV
Sbjct: 125 QRITGSNTSKVGNYSR------KEIKNLVAVYQHTHKLLDFNIPTIEEALGLISKSVQQV 184

Query: 67  ILDAKVGPPSYENGLAKDIISVVEKTQCKNCLVWAKSDSLARDIIRLSSNIKVGYIVMKD 126
           ILDAKVGPPSYENGLAKDIISVVEKTQCKNCLVWAKSDSLARDIIR S +IKVGYIVMKD
Sbjct: 185 ILDAKVGPPSYENGLAKDIISVVEKTQCKNCLVWAKSDSLARDIIRSSLDIKVGYIVMKD 244

Query: 127 PSTGERTNLLRMKGAKVVGTYHPLIDEKLMRIVHRRDKKVYAWTVDDIDSMKRMLAEGVD 186
           PSTGERTNLLRMKGAKVVG YHPLID  L+RI+HRRD+KVYAWTVDDI+SMKRML EGVD
Sbjct: 245 PSTGERTNLLRMKGAKVVGVYHPLIDGDLIRILHRRDRKVYAWTVDDIESMKRMLVEGVD 304

Query: 187 AVVTSNPSLLGSVMQDIRTTCLENGFSLSS 217
           AVVTSNP+LLGSVMQD RTTCLENGFS+SS
Sbjct: 305 AVVTSNPTLLGSVMQDTRTTCLENGFSISS 328

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BLAST of Lag0039369 vs. NCBI nr
Match: XP_022930187.1 (glycerophosphodiester phosphodiesterase GDPD4 [Cucurbita moschata])

HSP 1 Score: 342.4 bits (877), Expect = 2.8e-90
Identity = 168/188 (89.36%), Postives = 180/188 (95.74%), Query Frame = 0 

Query: 29  EEIKDLGAVYQHTHKLLDFNIPTIEEALALISKSVQQVILDAKVGPPSYENGLAKDIISV 88
           +EIK+LGA YQHT+KLLDFNIPTIEEAL LISKSV+QVILDAK+GPPSYENGLAKDIISV
Sbjct: 141 KEIKNLGAFYQHTNKLLDFNIPTIEEALVLISKSVKQVILDAKIGPPSYENGLAKDIISV 200

Query: 89  VEKTQCKNCLVWAKSDSLARDIIRLSSNIKVGYIVMKDPSTGERTNLLRMKGAKVVGTYH 148
           VEKTQCKNCLVWAKSDSL RDII+LSS++KVGYIVM DPSTGERTNLLRMKGAKVVG YH
Sbjct: 201 VEKTQCKNCLVWAKSDSLVRDIIKLSSDMKVGYIVMMDPSTGERTNLLRMKGAKVVGAYH 260

Query: 149 PLIDEKLMRIVHRRDKKVYAWTVDDIDSMKRMLAEGVDAVVTSNPSLLGSVMQDIRTTCL 208
           PLIDE LMR++HRRDKKVYAWTVDD+DSMKRML EGVDAVVTSNP+LLGSVMQDIRTTCL
Sbjct: 261 PLIDEDLMRMMHRRDKKVYAWTVDDVDSMKRMLVEGVDAVVTSNPTLLGSVMQDIRTTCL 320

Query: 209 ENGFSLSS 217
           ENGFSL S
Sbjct: 321 ENGFSLPS 328

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BLAST of Lag0039369 vs. NCBI nr
Match: KAG7025128.1 (Glycerophosphodiester phosphodiesterase GDPD4, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 342.4 bits (877), Expect = 2.8e-90
Identity = 168/188 (89.36%), Postives = 180/188 (95.74%), Query Frame = 0 

Query: 29  EEIKDLGAVYQHTHKLLDFNIPTIEEALALISKSVQQVILDAKVGPPSYENGLAKDIISV 88
           +EIK+LGA YQHT+KLLDFNIPTIEEAL LISKSV+QVILDAK+GPPSYENGLAKDIISV
Sbjct: 166 KEIKNLGAFYQHTNKLLDFNIPTIEEALVLISKSVKQVILDAKIGPPSYENGLAKDIISV 225

Query: 89  VEKTQCKNCLVWAKSDSLARDIIRLSSNIKVGYIVMKDPSTGERTNLLRMKGAKVVGTYH 148
           VEKTQCKNCLVWAKSDSL RDII+LSS++KVGYIVM DPSTGERTNLLRMKGAKVVG YH
Sbjct: 226 VEKTQCKNCLVWAKSDSLVRDIIKLSSDMKVGYIVMMDPSTGERTNLLRMKGAKVVGAYH 285

Query: 149 PLIDEKLMRIVHRRDKKVYAWTVDDIDSMKRMLAEGVDAVVTSNPSLLGSVMQDIRTTCL 208
           PLIDE LMR++HRRDKKVYAWTVDD+DSMKRML EGVDAVVTSNP+LLGSVMQDIRTTCL
Sbjct: 286 PLIDEDLMRMMHRRDKKVYAWTVDDVDSMKRMLVEGVDAVVTSNPTLLGSVMQDIRTTCL 345

Query: 209 ENGFSLSS 217
           ENGFSL S
Sbjct: 346 ENGFSLPS 353

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BLAST of Lag0039369 vs. ExPASy Swiss-Prot
Match: F4I8H8 (Glycerophosphodiester phosphodiesterase GDPD4 OS=Arabidopsis thaliana OX=3702 GN=GDPD4 PE=2 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 1.6e-64
Identity = 121/186 (65.05%), Postives = 149/186 (80.11%), Query Frame = 0 

Query: 29  EEIKDLGAVYQHTHKLLDFNIPTIEEALALISKSVQQVILDAKVGPPSYENGLAKDIISV 88
           ++IK+L         L    IPT+EEALALIS SV++VILDAKVGPP YE GLA+DI+S+
Sbjct: 141 KQIKELDVSEIVKGTLGSSRIPTLEEALALISNSVRKVILDAKVGPPMYEKGLAQDILSI 200

Query: 89  VEKTQCKNCLVWAKSDSLARDIIRLSSNIKVGYIVMKDPSTGERTNLLRMKGAKVVGTYH 148
           +E+ QC NC+VWAKSD+LARDIIR + +  VGYIVM DP TG R +LLRMKGA+VVG YH
Sbjct: 201 IERAQCNNCIVWAKSDTLARDIIRRAPDTMVGYIVMVDPLTGARNSLLRMKGARVVGVYH 260

Query: 149 PLIDEKLMRIVHRRDKKVYAWTVDDIDSMKRMLAEGVDAVVTSNPSLLGSVMQDIRTTCL 208
           PLIDE+L+R+V RR+K+VYAWTVDD D MKRML  GVDAVVTS+PS+   +M+D+RT CL
Sbjct: 261 PLIDEELVRVVRRRNKEVYAWTVDDADPMKRMLHLGVDAVVTSDPSMFQGLMEDLRTECL 320

Query: 209 ENGFSL 215
           E GFS+
Sbjct: 321 EEGFSI 326

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BLAST of Lag0039369 vs. ExPASy TrEMBL
Match: A0A5A7TDK6 (Glycerophosphodiester phosphodiesterase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G001420 PE=4 SV=1)

HSP 1 Score: 344.4 bits (882), Expect = 3.5e-91
Identity = 176/210 (83.81%), Postives = 187/210 (89.05%), Query Frame = 0 

Query: 7   RRVFGWNLERNNRISREVERLGEEIKDLGAVYQHTHKLLDFNIPTIEEALALISKSVQQV 66
           +R+ G N  +    SR      +EIK+L AVYQHTHKLLDFNIPTIEEAL LISKSVQQV
Sbjct: 125 QRITGSNTSKVGNYSR------KEIKNLVAVYQHTHKLLDFNIPTIEEALGLISKSVQQV 184

Query: 67  ILDAKVGPPSYENGLAKDIISVVEKTQCKNCLVWAKSDSLARDIIRLSSNIKVGYIVMKD 126
           ILDAKVGPPSYENGLAKDIISVVEKTQCKNCLVWAKSDSLARDIIR S +IKVGYIVMKD
Sbjct: 185 ILDAKVGPPSYENGLAKDIISVVEKTQCKNCLVWAKSDSLARDIIRSSLDIKVGYIVMKD 244

Query: 127 PSTGERTNLLRMKGAKVVGTYHPLIDEKLMRIVHRRDKKVYAWTVDDIDSMKRMLAEGVD 186
           PSTGERTNLLRMKGAKVVG YHPLID  LMRI+HRRD+KVYAWTVDDI+SMKRML EGVD
Sbjct: 245 PSTGERTNLLRMKGAKVVGVYHPLIDGDLMRILHRRDRKVYAWTVDDIESMKRMLVEGVD 304

Query: 187 AVVTSNPSLLGSVMQDIRTTCLENGFSLSS 217
           AVVTSNP+LLGSVMQD RTTCLENGFS+SS
Sbjct: 305 AVVTSNPTLLGSVMQDTRTTCLENGFSISS 328

[Close]
BLAST of Lag0039369 vs. ExPASy TrEMBL
Match: A0A6J1IF47 (Glycerophosphodiester phosphodiesterase OS=Cucurbita maxima OX=3661 GN=LOC111472694 PE=4 SV=1)

HSP 1 Score: 343.2 bits (879), Expect = 7.9e-91
Identity = 172/210 (81.90%), Postives = 188/210 (89.52%), Query Frame = 0 

Query: 7   RRVFGWNLERNNRISREVERLGEEIKDLGAVYQHTHKLLDFNIPTIEEALALISKSVQQV 66
           +R+ G N+ +    S       +EIK+LGA YQHT+KLLDFNIPTIEEAL LISKSV+QV
Sbjct: 125 QRITGSNISQVGNFSM------KEIKNLGAFYQHTNKLLDFNIPTIEEALVLISKSVKQV 184

Query: 67  ILDAKVGPPSYENGLAKDIISVVEKTQCKNCLVWAKSDSLARDIIRLSSNIKVGYIVMKD 126
           ILDAK+GPPSYENGLAKDIISVVEKTQCKNCLVWAKSDSL RDII+LSS++KVGYIVM D
Sbjct: 185 ILDAKIGPPSYENGLAKDIISVVEKTQCKNCLVWAKSDSLVRDIIKLSSDMKVGYIVMMD 244

Query: 127 PSTGERTNLLRMKGAKVVGTYHPLIDEKLMRIVHRRDKKVYAWTVDDIDSMKRMLAEGVD 186
           PSTGERTNLLRMKGAKVVG YHPLIDE LMR++HRRDKKVYAWTVDD+DSMKRML EGVD
Sbjct: 245 PSTGERTNLLRMKGAKVVGAYHPLIDEDLMRMMHRRDKKVYAWTVDDVDSMKRMLVEGVD 304

Query: 187 AVVTSNPSLLGSVMQDIRTTCLENGFSLSS 217
           AVVTSNP+LLGSVMQDIRTTCLENGFSL S
Sbjct: 305 AVVTSNPTLLGSVMQDIRTTCLENGFSLPS 328

[Close]
BLAST of Lag0039369 vs. ExPASy TrEMBL
Match: A0A1S3CAB9 (Glycerophosphodiester phosphodiesterase OS=Cucumis melo OX=3656 GN=LOC103498627 PE=4 SV=1)

HSP 1 Score: 342.8 bits (878), Expect = 1.0e-90
Identity = 175/210 (83.33%), Postives = 187/210 (89.05%), Query Frame = 0 

Query: 7   RRVFGWNLERNNRISREVERLGEEIKDLGAVYQHTHKLLDFNIPTIEEALALISKSVQQV 66
           +R+ G N  +    SR      +EIK+L AVYQHTHKLLDFNIPTIEEAL LISKSVQQV
Sbjct: 125 QRITGSNTSKVGNYSR------KEIKNLVAVYQHTHKLLDFNIPTIEEALGLISKSVQQV 184

Query: 67  ILDAKVGPPSYENGLAKDIISVVEKTQCKNCLVWAKSDSLARDIIRLSSNIKVGYIVMKD 126
           ILDAKVGPPSYENGLAKDIISVVEKTQCKNCLVWAKSDSLARDIIR S +IKVGYIVMKD
Sbjct: 185 ILDAKVGPPSYENGLAKDIISVVEKTQCKNCLVWAKSDSLARDIIRSSLDIKVGYIVMKD 244

Query: 127 PSTGERTNLLRMKGAKVVGTYHPLIDEKLMRIVHRRDKKVYAWTVDDIDSMKRMLAEGVD 186
           PSTGERTNLLRMKGAKVVG YHPLID  L+RI+HRRD+KVYAWTVDDI+SMKRML EGVD
Sbjct: 245 PSTGERTNLLRMKGAKVVGVYHPLIDGDLIRILHRRDRKVYAWTVDDIESMKRMLVEGVD 304

Query: 187 AVVTSNPSLLGSVMQDIRTTCLENGFSLSS 217
           AVVTSNP+LLGSVMQD RTTCLENGFS+SS
Sbjct: 305 AVVTSNPTLLGSVMQDTRTTCLENGFSISS 328

[Close]
BLAST of Lag0039369 vs. ExPASy TrEMBL
Match: A0A6J1EPP0 (Glycerophosphodiester phosphodiesterase OS=Cucurbita moschata OX=3662 GN=LOC111436688 PE=4 SV=1)

HSP 1 Score: 342.4 bits (877), Expect = 1.3e-90
Identity = 168/188 (89.36%), Postives = 180/188 (95.74%), Query Frame = 0 

Query: 29  EEIKDLGAVYQHTHKLLDFNIPTIEEALALISKSVQQVILDAKVGPPSYENGLAKDIISV 88
           +EIK+LGA YQHT+KLLDFNIPTIEEAL LISKSV+QVILDAK+GPPSYENGLAKDIISV
Sbjct: 141 KEIKNLGAFYQHTNKLLDFNIPTIEEALVLISKSVKQVILDAKIGPPSYENGLAKDIISV 200

Query: 89  VEKTQCKNCLVWAKSDSLARDIIRLSSNIKVGYIVMKDPSTGERTNLLRMKGAKVVGTYH 148
           VEKTQCKNCLVWAKSDSL RDII+LSS++KVGYIVM DPSTGERTNLLRMKGAKVVG YH
Sbjct: 201 VEKTQCKNCLVWAKSDSLVRDIIKLSSDMKVGYIVMMDPSTGERTNLLRMKGAKVVGAYH 260

Query: 149 PLIDEKLMRIVHRRDKKVYAWTVDDIDSMKRMLAEGVDAVVTSNPSLLGSVMQDIRTTCL 208
           PLIDE LMR++HRRDKKVYAWTVDD+DSMKRML EGVDAVVTSNP+LLGSVMQDIRTTCL
Sbjct: 261 PLIDEDLMRMMHRRDKKVYAWTVDDVDSMKRMLVEGVDAVVTSNPTLLGSVMQDIRTTCL 320

Query: 209 ENGFSLSS 217
           ENGFSL S
Sbjct: 321 ENGFSLPS 328

[Close]
BLAST of Lag0039369 vs. ExPASy TrEMBL
Match: A0A0A0KSR2 (Glycerophosphodiester phosphodiesterase OS=Cucumis sativus OX=3659 GN=Csa_5G647310 PE=4 SV=1)

HSP 1 Score: 339.3 bits (869), Expect = 1.1e-89
Identity = 169/188 (89.89%), Postives = 178/188 (94.68%), Query Frame = 0 

Query: 29  EEIKDLGAVYQHTHKLLDFNIPTIEEALALISKSVQQVILDAKVGPPSYENGLAKDIISV 88
           +EIK+LGAVYQHTHKLLDFNIPTIEEAL  ISKSVQQVILDAKVGPPSYENGLAKDIISV
Sbjct: 141 KEIKNLGAVYQHTHKLLDFNIPTIEEALVSISKSVQQVILDAKVGPPSYENGLAKDIISV 200

Query: 89  VEKTQCKNCLVWAKSDSLARDIIRLSSNIKVGYIVMKDPSTGERTNLLRMKGAKVVGTYH 148
           VEKTQCKNCLVWAKSDSLARDIIR SS+IKVGYIVMKDPSTGERTNLLRMKGAKVVG YH
Sbjct: 201 VEKTQCKNCLVWAKSDSLARDIIRSSSDIKVGYIVMKDPSTGERTNLLRMKGAKVVGVYH 260

Query: 149 PLIDEKLMRIVHRRDKKVYAWTVDDIDSMKRMLAEGVDAVVTSNPSLLGSVMQDIRTTCL 208
            LID  LMRI+HRRD+K YAWTVDDI+SMKRML EGVDAVVTSNP+LLGSVMQ+ RTTCL
Sbjct: 261 QLIDGDLMRILHRRDRKAYAWTVDDIESMKRMLVEGVDAVVTSNPTLLGSVMQESRTTCL 320

Query: 209 ENGFSLSS 217
           ENGFS+SS
Sbjct: 321 ENGFSISS 328

[Close]
BLAST of Lag0039369 vs. TAIR 10
Match: AT1G71340.1 (PLC-like phosphodiesterases superfamily protein )

HSP 1 Score: 247.3 bits (630), Expect = 1.1e-65
Identity = 121/186 (65.05%), Postives = 149/186 (80.11%), Query Frame = 0 

Query: 29  EEIKDLGAVYQHTHKLLDFNIPTIEEALALISKSVQQVILDAKVGPPSYENGLAKDIISV 88
           ++IK+L         L    IPT+EEALALIS SV++VILDAKVGPP YE GLA+DI+S+
Sbjct: 141 KQIKELDVSEIVKGTLGSSRIPTLEEALALISNSVRKVILDAKVGPPMYEKGLAQDILSI 200

Query: 89  VEKTQCKNCLVWAKSDSLARDIIRLSSNIKVGYIVMKDPSTGERTNLLRMKGAKVVGTYH 148
           +E+ QC NC+VWAKSD+LARDIIR + +  VGYIVM DP TG R +LLRMKGA+VVG YH
Sbjct: 201 IERAQCNNCIVWAKSDTLARDIIRRAPDTMVGYIVMVDPLTGARNSLLRMKGARVVGVYH 260

Query: 149 PLIDEKLMRIVHRRDKKVYAWTVDDIDSMKRMLAEGVDAVVTSNPSLLGSVMQDIRTTCL 208
           PLIDE+L+R+V RR+K+VYAWTVDD D MKRML  GVDAVVTS+PS+   +M+D+RT CL
Sbjct: 261 PLIDEELVRVVRRRNKEVYAWTVDDADPMKRMLHLGVDAVVTSDPSMFQGLMEDLRTECL 320

Query: 209 ENGFSL 215
           E GFS+
Sbjct: 321 EEGFSI 326

The following BLAST results are available for this feature:
BLAST of Lag0039369 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0039349.17.3e-9183.81glycerophosphodiester phosphodiesterase GDPD4 isoform X2 [Cucumis melo var. maku... [more]
XP_022974073.11.6e-9081.90glycerophosphodiester phosphodiesterase GDPD4 [Cucurbita maxima][more]
XP_008459511.12.1e-9083.33PREDICTED: glycerophosphodiester phosphodiesterase GDPD4 isoform X2 [Cucumis mel... [more]
XP_022930187.12.8e-9089.36glycerophosphodiester phosphodiesterase GDPD4 [Cucurbita moschata][more]
KAG7025128.12.8e-9089.36Glycerophosphodiester phosphodiesterase GDPD4, partial [Cucurbita argyrosperma s... [more]
BLAST of Lag0039369 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
F4I8H81.6e-6465.05Glycerophosphodiester phosphodiesterase GDPD4 OS=Arabidopsis thaliana OX=3702 GN... [more]
BLAST of Lag0039369 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7TDK63.5e-9183.81Glycerophosphodiester phosphodiesterase OS=Cucumis melo var. makuwa OX=1194695 G... [more]
A0A6J1IF477.9e-9181.90Glycerophosphodiester phosphodiesterase OS=Cucurbita maxima OX=3661 GN=LOC111472... [more]
A0A1S3CAB91.0e-9083.33Glycerophosphodiester phosphodiesterase OS=Cucumis melo OX=3656 GN=LOC103498627 ... [more]
A0A6J1EPP01.3e-9089.36Glycerophosphodiester phosphodiesterase OS=Cucurbita moschata OX=3662 GN=LOC1114... [more]
A0A0A0KSR21.1e-8989.89Glycerophosphodiester phosphodiesterase OS=Cucumis sativus OX=3659 GN=Csa_5G6473... [more]
BLAST of Lag0039369 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G71340.11.1e-6565.05PLC-like phosphodiesterases superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR030395Glycerophosphodiester phosphodiesterase domainPFAMPF03009GDPDcoord: 130..193
e-value: 1.0E-6
score: 28.7
IPR017946PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamilyGENE3D3.20.20.190Phosphatidylinositol (PI) phosphodiesterasecoord: 12..203
e-value: 2.4E-26
score: 94.8
IPR017946PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamilySUPERFAMILY51695PLC-like phosphodiesterasescoord: 29..202
IPR044236Glycerophosphodiester phosphodiesterase GDPD4PANTHERPTHR47449GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE GDPD4coord: 29..215
NoneNo IPR availableCDDcd08556GDPDcoord: 49..192
e-value: 6.50945E-28
score: 102.342

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0039369.1Lag0039369.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006071 glycerol metabolic process
biological_process GO:0006629 lipid metabolic process
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0008889 glycerophosphodiester phosphodiesterase activity
molecular_function GO:0008081 phosphoric diester hydrolase activity