Lag0038571 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0038571
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Unknown protein
Location	chr2: 20657679 .. 20658394 (-)
RNA-Seq Expression	Lag0038571
Synteny	Lag0038571

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGGTGGGATTGTTTGTTGGAGTTAGTGTTGAAGTTACAACAATTTGTGATCAAACAAGAAGAAGAGTTGAAAGCATTTCGCCAAACGTTTGAGGAATCACAAAAGAAACTCAAAGAAATGCGCATGGAAAGAGAACAAAATCGAAAGAAGGAAGAGAAGGAAATAGTGAAGAAAATAAAGCGTAAACGAAGCTCGATTGGATCGAAAAAGATTAATCAGAAGCAGGTCGAAGAGTGGCGGGGAGACGTCGACCCAACACCAAGGTACAATTGGAAACACAAAAGAAAACCGTTCGAGAAATTCCAAAAACCTTTCAAAAAATTCCGAAAGTGTTTTTAGGTAAGGAATTGTGAAAAGCATATGAAAAGATCCACCAACTGAAAGATGGGTGGTTGAAAGGGAGAGAAAGAGGGAGACAACGACACAGTCGATGTCATGGACGACCTCGACGTTGGAAAAGCAAAAGTTCAACAAATACATCAGAGAAGCAAGAAATGTTAGCAGGCGAAGAAATGGTAAAATGGTCAAATTCGATGATGGAAATTCCACAACAAAGAGGAAGAAAGGTTGAGAGGGAAGGGAAGAATGAAAGTATGCCAGCTGTCACACGATCGAAGATGAAGACGTGGTGGAAGCTGCGACTGGAGGATGGTGAATGGATGGAAATGGACGAGGTAGTCACGAAACGAAGGGTCCGTTTGGATACATTTTAA

mRNA sequence

ATGAGGTGGGATTGTTTGTTGGAGTTAGTGTTGAAGTTACAACAATTTGTGATCAAACAAGAAGAAGAGTTGAAAGCATTTCGCCAAACGTTTGAGGAATCACAAAAGAAACTCAAAGAAATGCGCATGGAAAGAGAACAAAATCGAAAGAAGGAAGAGAAGGAAATAGTGAAGAAAATAAAGCGTAAACGAAGCTCGATTGGATCGAAAAAGATTAATCAGAAGCAGGTCGAAGAGTGGCGGGGAGACGTCGACCCAACACCAAGCAAAAGTTCAACAAATACATCAGAGAAGCAAGAAATGTTAGCAGGCGAAGAAATGGTAAAATGGTCAAATTCGATGATGGAAATTCCACAACAAAGAGGAAGAAAGGTTGAGAGGGAAGGGAAGAATGAAAGTATGCCAGCTGTCACACGATCGAAGATGAAGACGTGGTGGAAGCTGCGACTGGAGGATGGTGAATGGATGGAAATGGACGAGGTAGTCACGAAACGAAGGGTCCGTTTGGATACATTTTAA

Coding sequence (CDS)

ATGAGGTGGGATTGTTTGTTGGAGTTAGTGTTGAAGTTACAACAATTTGTGATCAAACAAGAAGAAGAGTTGAAAGCATTTCGCCAAACGTTTGAGGAATCACAAAAGAAACTCAAAGAAATGCGCATGGAAAGAGAACAAAATCGAAAGAAGGAAGAGAAGGAAATAGTGAAGAAAATAAAGCGTAAACGAAGCTCGATTGGATCGAAAAAGATTAATCAGAAGCAGGTCGAAGAGTGGCGGGGAGACGTCGACCCAACACCAAGCAAAAGTTCAACAAATACATCAGAGAAGCAAGAAATGTTAGCAGGCGAAGAAATGGTAAAATGGTCAAATTCGATGATGGAAATTCCACAACAAAGAGGAAGAAAGGTTGAGAGGGAAGGGAAGAATGAAAGTATGCCAGCTGTCACACGATCGAAGATGAAGACGTGGTGGAAGCTGCGACTGGAGGATGGTGAATGGATGGAAATGGACGAGGTAGTCACGAAACGAAGGGTCCGTTTGGATACATTTTAA

Protein sequence

MRWDCLLELVLKLQQFVIKQEEELKAFRQTFEESQKKLKEMRMEREQNRKKEEKEIVKKIKRKRSSIGSKKINQKQVEEWRGDVDPTPSKSSTNTSEKQEMLAGEEMVKWSNSMMEIPQQRGRKVEREGKNESMPAVTRSKMKTWWKLRLEDGEWMEMDEVVTKRRVRLDTF

Homology

The following BLAST results are available for this feature:

BLAST of Lag0038571 vs.


Match Name	E-value	Identity	Description

BLAST of Lag0038571 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 17..63
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 120..134
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 38..62
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 86..100
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 38..138

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0038571.1	Lag0038571.1	mRNA