Lag0038511 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0038511
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	RNase H domain-containing protein
Location	chr2: 19174359 .. 19175066 (+)
RNA-Seq Expression	Lag0038511
Synteny	Lag0038511

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGGCACATCTGGAATTTTAGGAACAAATCAAGGGACCAAATCTATTCCCACAACAAATTGGCAGTAGTCGATTCTATAATCAAAGCAATTGAAGGATCCATATCAGAATGGGAAGGAATTTACCTGAAGAGCAACGACCCGAAAAGATTAGGGAACCAAGTGAGTCAAGTTCAGTGGCAGCTCCCGAGTGTGAACGGTTGGAAAATGAATTCAAACGCGTCGTGGTTCGACAGCTCTAGCGTCGGAGGAATAGGTTGGGTTGTGCATGACTCGATTGGGTCCCTAATCTGTTTCGGATTCCAAAAAATAACAAGAAATTGGGGGATCAAGGTTTTGGAGGCCAAAGCAATTCTAGTAGGAATCAAAGTTATTTCCAATACCTGTATTCAGAAGAAGATCCCAATGGAATTCGAGTCGGACTCTTTGGAAGTGGTCAGATCTTTCCGTGGTGAAGACGAAGATCTCTCAGAACTGAAGCCGGTGGTCGAAGAAATCCTGTGCGTCTCTTCGAAGCTGGAGTCAGCGACTTTTTTGCACTGTAATCGCCATGCCAACGCAGTAGCCCACTGGTTGGCAAGGAAGGCAATCGTTTTTTGTAGCTCCGGTCAAGCGAATCCCCATTTGAGGGATTGTGGGCAAGTTTTTTGGGCCCTAACCCTTCGTTTTCTCTCTCCTTTTTATGAGGGTGGTTGTTTTGTTGGTTAG

mRNA sequence

ATGTGGCACATCTGGAATTTTAGGAACAAATCAAGGGACCAAATCTATTCCCACAACAAATTGGCAGTAGTCGATTCTATAATCAAAGCAATTGAAGGATCCATATCAGAATGGGAAGGAATTTACCTGAAGAGCAACGACCCGAAAAGATTAGGGAACCAAGTGAGTCAAGTTCAGTGGCAGCTCCCGAGTGTGAACGGTTGGAAAATGAATTCAAACGCGTCGTGGTTCGACAGCTCTAGCGTCGGAGGAATAGGTTGGGTTGTGCATGACTCGATTGGGTCCCTAATCTGTTTCGGATTCCAAAAAATAACAAGAAATTGGGGGATCAAGGTTTTGGAGGCCAAAGCAATTCTAGTAGGAATCAAAGTTATTTCCAATACCTGTATTCAGAAGAAGATCCCAATGGAATTCGAGTCGGACTCTTTGGAAGTGGTCAGATCTTTCCGTGGTGAAGACGAAGATCTCTCAGAACTGAAGCCGGTGGTCGAAGAAATCCTGTGCGTCTCTTCGAAGCTGGAGTCAGCGACTTTTTTGCACTGTAATCGCCATGCCAACGCAGTAGCCCACTGGTTGGCAAGGAAGGCAATCGTTTTTTGTAGCTCCGGTCAAGCGAATCCCCATTTGAGGGATTGTGGGCAAGTTTTTTGGGCCCTAACCCTTCGTTTTCTCTCTCCTTTTTATGAGGGTGGTTGTTTTGTTGGTTAG

Coding sequence (CDS)

ATGTGGCACATCTGGAATTTTAGGAACAAATCAAGGGACCAAATCTATTCCCACAACAAATTGGCAGTAGTCGATTCTATAATCAAAGCAATTGAAGGATCCATATCAGAATGGGAAGGAATTTACCTGAAGAGCAACGACCCGAAAAGATTAGGGAACCAAGTGAGTCAAGTTCAGTGGCAGCTCCCGAGTGTGAACGGTTGGAAAATGAATTCAAACGCGTCGTGGTTCGACAGCTCTAGCGTCGGAGGAATAGGTTGGGTTGTGCATGACTCGATTGGGTCCCTAATCTGTTTCGGATTCCAAAAAATAACAAGAAATTGGGGGATCAAGGTTTTGGAGGCCAAAGCAATTCTAGTAGGAATCAAAGTTATTTCCAATACCTGTATTCAGAAGAAGATCCCAATGGAATTCGAGTCGGACTCTTTGGAAGTGGTCAGATCTTTCCGTGGTGAAGACGAAGATCTCTCAGAACTGAAGCCGGTGGTCGAAGAAATCCTGTGCGTCTCTTCGAAGCTGGAGTCAGCGACTTTTTTGCACTGTAATCGCCATGCCAACGCAGTAGCCCACTGGTTGGCAAGGAAGGCAATCGTTTTTTGTAGCTCCGGTCAAGCGAATCCCCATTTGAGGGATTGTGGGCAAGTTTTTTGGGCCCTAACCCTTCGTTTTCTCTCTCCTTTTTATGAGGGTGGTTGTTTTGTTGGTTAG

Protein sequence

MWHIWNFRNKSRDQIYSHNKLAVVDSIIKAIEGSISEWEGIYLKSNDPKRLGNQVSQVQWQLPSVNGWKMNSNASWFDSSSVGGIGWVVHDSIGSLICFGFQKITRNWGIKVLEAKAILVGIKVISNTCIQKKIPMEFESDSLEVVRSFRGEDEDLSELKPVVEEILCVSSKLESATFLHCNRHANAVAHWLARKAIVFCSSGQANPHLRDCGQVFWALTLRFLSPFYEGGCFVG

Homology

[Close]

BLAST of Lag0038511 vs. NCBI nr
Match: XP_022143535.1 (uncharacterized protein LOC111013412 [Momordica charantia])

HSP 1 Score: 97.1 bits (240), Expect = 2.2e-16
Identity = 63/201 (31.34%), Postives = 100/201 (49.75%), Query Frame = 0


Query: 2   WHIWNFRNKSRDQIYSHNKLAVVDSIIKAIEGSISEWEGIYLKSNDP-----KRLGNQVS 61
           W IW  RNKS  +        +  +I + I  S      +  KS +      +R+ +   
Sbjct: 17  WQIWEMRNKSIFKGVHPETRDIQLAIDRYIINSAGRNTNLKGKSTNKDLHLIRRIEDNTG 76

Query: 62  QVQWQLPSVNGWKMNSNASWFDSSSVGGIGWVVHDSIGSLICFGFQKITRNWGIKVLEAK 121
             QW+ P+ N WK+N+NA+W   ++ GGIGW++ D  G +I    + I     I  LE  
Sbjct: 77  -AQWKPPTSNSWKLNTNAAWRADTNTGGIGWILRDEKGEVIKASCRIIRAERNITYLEVM 136

Query: 122 AILVGIKVISNTCIQKKIPMEFESDSLEVVRSFRGEDEDLSELKPVVEEILCVSSKLESA 181
           AI  G++ I     +   P+  ESDSLE +     + +D +E+  ++EEI  +   +E  
Sbjct: 137 AICEGLRAIRQEHCR---PIHLESDSLEAIHLLHRQCQDQTEIIWLLEEIWQMMKDMEIV 196

Query: 182 TFLHCNRHANAVAHWLARKAI 198
           +  H +R AN VAH LAR+A+
Sbjct: 197 SMRHISREANKVAHGLARRAM 213

[Close]

BLAST of Lag0038511 vs. NCBI nr
Match: XP_022155262.1 (uncharacterized protein LOC111022403 [Momordica charantia])

HSP 1 Score: 95.5 bits (236), Expect = 6.5e-16
Identity = 63/201 (31.34%), Postives = 104/201 (51.74%), Query Frame = 0


Query: 2   WHIWNFRNKSRDQIYSHNKLAVVDSIIKAIEGSISEWEGIYLKSNDPKRLGNQVSQVQWQ 61
           W IWN RN    +    +   ++  + K +  + S ++     S   K L N   +++W+
Sbjct: 18  WVIWNHRNYVIFRGEHSSFSTMIQQLTKFV--TESSYQSETSLSMLHKTLNN---KLKWE 77

Query: 62  LPSVNGWKMNSNASWFDSSSVGGIGWVVHDSIGSLICFGFQKITRNWGIKVLEAKAILVG 121
            P ++ W +N++ASW DS+  GGIGW++    G ++  G + +     +K+LEA AIL G
Sbjct: 78  PPPMHIWTLNADASWSDSTHRGGIGWIIRSWDGDIVLAGNRFVEACNNVKLLEASAILEG 137

Query: 122 IKVISNTCIQKKIPMEFESDSLEVVRSFRGEDEDLSELKPVVEEILCVSSKLESATFLHC 181
           ++ ++N  + +  P+  E+DS EV      + EDL++   VVEEIL +    E   F   
Sbjct: 138 LRNLTNLGVLR--PLHIETDSAEVESLLNRKREDLTKTGWVVEEILNLRDSCEILAFAKV 197

Query: 182 NRHANAVAHWLARKAIVFCSS 203
            R  N  AH LA++A V   S
Sbjct: 198 GRETNGCAHSLAQRASVLRES 211

[Close]

BLAST of Lag0038511 vs. NCBI nr
Match: XP_022156777.1 (uncharacterized protein LOC111023608 [Momordica charantia])

HSP 1 Score: 92.4 bits (228), Expect = 5.5e-15
Identity = 67/209 (32.06%), Postives = 110/209 (52.63%), Query Frame = 0


Query: 2   WHIWNFRNKSRDQ-IYSHNK--LAVVDSIIKAIEGSISEWEGIYLKSNDP-----KRLGN 61
           W IW  RNKS  + ++S  +    V+D  I    G  +  +G   KS +      +R+G+
Sbjct: 17  WQIWEMRNKSIFKGVHSETRDIQLVIDRYIINSAGRDTNLKG---KSANKDLHLIRRIGD 76

Query: 62  QVSQVQWQLPSVNGWKMNSNASWFDSSSVGGIGWVVHDSIGSLICFGFQKITRNWGIKVL 121
                +W+ P+ N WK+N++A+W   ++ GGIGW++ D  G +I    + I     I  L
Sbjct: 77  NTG-ARWKPPTSNSWKLNTDAAWRADTNTGGIGWILRDEKGEVIKADCRIIRTERNITYL 136

Query: 122 EAKAILVGIKVI-SNTC--IQKK--IPMEFESDSLEVVRSFRGEDEDLSELKPVVEEILC 181
           E  AI  G++ I    C  IQ++   P+  ESDSLE +     + +D +E+  ++EEI  
Sbjct: 137 EVMAICEGLRAIRQEHCRPIQQEHCRPIHLESDSLEAIHLLHRQCQDQTEIIWLLEEIWQ 196

Query: 182 VSSKLESATFLHCNRHANAVAHWLARKAI 198
           +   ++  +  H +R AN VAH LAR+A+
Sbjct: 197 MMEDMKIVSMRHISREANKVAHDLARRAM 221

[Close]

BLAST of Lag0038511 vs. NCBI nr
Match: XP_019095662.1 (PREDICTED: uncharacterized protein LOC104763574 [Camelina sativa])

HSP 1 Score: 84.7 bits (208), Expect = 1.1e-12
Identity = 56/203 (27.59%), Postives = 100/203 (49.26%), Query Frame = 0


Query: 1    MWHIWNFRNKSRDQIYSHNKLAVVDSIIKAIEGSISEWEGIYLKSNDPKRLGNQVS---- 60
            +W +W    KSR+++  + K   V+ +IK +E    EW G   +  +  RL    S    
Sbjct: 1581 LWRLW----KSRNELCFNGKDIGVERLIKLVEEDAEEWRG---REENTGRLRPNPSALSL 1640

Query: 61   QVQWQLPSVNGWKMNSNASWFDSSSVGGIGWVVHDSIGSLICFGFQKITRNWGIKVLEAK 120
            +V+W+ P +   K N + +W       G+GWV+ D  GS++  G + + R   +  +E +
Sbjct: 1641 EVRWRPPPLEWVKCNMDGAWPREGDRSGVGWVLRDHQGSVLWMGARALPRTRSVLEVETE 1700

Query: 121  AILVGIKVISNTCIQKKIPMEFESDSLEVVRSFRGEDEDLSELKPVVEEILCVSSKLESA 180
            A+   +  ++    +K I   FESDS +++ +  G DE    +  ++E+I C+  + E  
Sbjct: 1701 ALRWAMVSVARFQYKKVI---FESDSQDLISAING-DERRPPIATLLEDIKCLCRQFEEV 1760

Query: 181  TFLHCNRHANAVAHWLARKAIVF 200
            TF    R  NAVA  +A++   F
Sbjct: 1761 TFKFTKRGGNAVADRIAQETTSF 1772

[Close]

BLAST of Lag0038511 vs. NCBI nr
Match: XP_022143317.1 (uncharacterized protein LOC111013216 [Momordica charantia])

HSP 1 Score: 84.7 bits (208), Expect = 1.1e-12
Identity = 55/164 (33.54%), Postives = 87/164 (53.05%), Query Frame = 0


Query: 2   WHIWNFRNKSRDQIYSHNKLAVVDSIIKAIEGSISEWEGI----YLKSND---PKRLGN- 61
           W IW  RN+S  +  + ++  +  SI+  I  +I +   I      + ND   P+   N 
Sbjct: 39  WQIWESRNRSIFRGETIDEQQLDRSIVLFINSNIDKGTCISQTRRSQQNDGYLPRGRENL 98

Query: 62  QVSQVQWQLPSVNGWKMNSNASWFDSSSVGGIGWVVHDSIGSLICFGFQKITRNWGIKVL 121
            +  V+W  P  N WK+N++ASW +   VGGIGW++ D  G ++  G  KI     I  L
Sbjct: 99  NMLGVRWSAPPTNCWKLNTDASWSEEREVGGIGWILCDCRGEIVLAGNCKIREKKEINAL 158

Query: 122 EAKAILVGIKVISNTCIQKKIPMEFESDSLEVVRSFRGEDEDLS 158
           E   I+ G++ I+   +Q + P+  ESDS+EV+R  + ED DL+
Sbjct: 159 ELMTIIRGLQFIN---MQSRSPIYLESDSVEVIRLMKKEDVDLT 199

[Close]

BLAST of Lag0038511 vs. ExPASy TrEMBL
Match: A0A6J1CP26 (uncharacterized protein LOC111013412 OS=Momordica charantia OX=3673 GN=LOC111013412 PE=4 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 1.1e-16
Identity = 63/201 (31.34%), Postives = 100/201 (49.75%), Query Frame = 0


Query: 2   WHIWNFRNKSRDQIYSHNKLAVVDSIIKAIEGSISEWEGIYLKSNDP-----KRLGNQVS 61
           W IW  RNKS  +        +  +I + I  S      +  KS +      +R+ +   
Sbjct: 17  WQIWEMRNKSIFKGVHPETRDIQLAIDRYIINSAGRNTNLKGKSTNKDLHLIRRIEDNTG 76

Query: 62  QVQWQLPSVNGWKMNSNASWFDSSSVGGIGWVVHDSIGSLICFGFQKITRNWGIKVLEAK 121
             QW+ P+ N WK+N+NA+W   ++ GGIGW++ D  G +I    + I     I  LE  
Sbjct: 77  -AQWKPPTSNSWKLNTNAAWRADTNTGGIGWILRDEKGEVIKASCRIIRAERNITYLEVM 136

Query: 122 AILVGIKVISNTCIQKKIPMEFESDSLEVVRSFRGEDEDLSELKPVVEEILCVSSKLESA 181
           AI  G++ I     +   P+  ESDSLE +     + +D +E+  ++EEI  +   +E  
Sbjct: 137 AICEGLRAIRQEHCR---PIHLESDSLEAIHLLHRQCQDQTEIIWLLEEIWQMMKDMEIV 196

Query: 182 TFLHCNRHANAVAHWLARKAI 198
           +  H +R AN VAH LAR+A+
Sbjct: 197 SMRHISREANKVAHGLARRAM 213

[Close]

BLAST of Lag0038511 vs. ExPASy TrEMBL
Match: A0A6J1DNV9 (uncharacterized protein LOC111022403 OS=Momordica charantia OX=3673 GN=LOC111022403 PE=4 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 3.1e-16
Identity = 63/201 (31.34%), Postives = 104/201 (51.74%), Query Frame = 0


Query: 2   WHIWNFRNKSRDQIYSHNKLAVVDSIIKAIEGSISEWEGIYLKSNDPKRLGNQVSQVQWQ 61
           W IWN RN    +    +   ++  + K +  + S ++     S   K L N   +++W+
Sbjct: 18  WVIWNHRNYVIFRGEHSSFSTMIQQLTKFV--TESSYQSETSLSMLHKTLNN---KLKWE 77

Query: 62  LPSVNGWKMNSNASWFDSSSVGGIGWVVHDSIGSLICFGFQKITRNWGIKVLEAKAILVG 121
            P ++ W +N++ASW DS+  GGIGW++    G ++  G + +     +K+LEA AIL G
Sbjct: 78  PPPMHIWTLNADASWSDSTHRGGIGWIIRSWDGDIVLAGNRFVEACNNVKLLEASAILEG 137

Query: 122 IKVISNTCIQKKIPMEFESDSLEVVRSFRGEDEDLSELKPVVEEILCVSSKLESATFLHC 181
           ++ ++N  + +  P+  E+DS EV      + EDL++   VVEEIL +    E   F   
Sbjct: 138 LRNLTNLGVLR--PLHIETDSAEVESLLNRKREDLTKTGWVVEEILNLRDSCEILAFAKV 197

Query: 182 NRHANAVAHWLARKAIVFCSS 203
            R  N  AH LA++A V   S
Sbjct: 198 GRETNGCAHSLAQRASVLRES 211

[Close]

BLAST of Lag0038511 vs. ExPASy TrEMBL
Match: A0A6J1DSV1 (uncharacterized protein LOC111023608 OS=Momordica charantia OX=3673 GN=LOC111023608 PE=4 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 2.6e-15
Identity = 67/209 (32.06%), Postives = 110/209 (52.63%), Query Frame = 0


Query: 2   WHIWNFRNKSRDQ-IYSHNK--LAVVDSIIKAIEGSISEWEGIYLKSNDP-----KRLGN 61
           W IW  RNKS  + ++S  +    V+D  I    G  +  +G   KS +      +R+G+
Sbjct: 17  WQIWEMRNKSIFKGVHSETRDIQLVIDRYIINSAGRDTNLKG---KSANKDLHLIRRIGD 76

Query: 62  QVSQVQWQLPSVNGWKMNSNASWFDSSSVGGIGWVVHDSIGSLICFGFQKITRNWGIKVL 121
                +W+ P+ N WK+N++A+W   ++ GGIGW++ D  G +I    + I     I  L
Sbjct: 77  NTG-ARWKPPTSNSWKLNTDAAWRADTNTGGIGWILRDEKGEVIKADCRIIRTERNITYL 136

Query: 122 EAKAILVGIKVI-SNTC--IQKK--IPMEFESDSLEVVRSFRGEDEDLSELKPVVEEILC 181
           E  AI  G++ I    C  IQ++   P+  ESDSLE +     + +D +E+  ++EEI  
Sbjct: 137 EVMAICEGLRAIRQEHCRPIQQEHCRPIHLESDSLEAIHLLHRQCQDQTEIIWLLEEIWQ 196

Query: 182 VSSKLESATFLHCNRHANAVAHWLARKAI 198
           +   ++  +  H +R AN VAH LAR+A+
Sbjct: 197 MMEDMKIVSMRHISREANKVAHDLARRAM 221

[Close]

BLAST of Lag0038511 vs. ExPASy TrEMBL
Match: A0A6J1CQG0 (uncharacterized protein LOC111013216 OS=Momordica charantia OX=3673 GN=LOC111013216 PE=4 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 5.5e-13
Identity = 55/164 (33.54%), Postives = 87/164 (53.05%), Query Frame = 0


Query: 2   WHIWNFRNKSRDQIYSHNKLAVVDSIIKAIEGSISEWEGI----YLKSND---PKRLGN- 61
           W IW  RN+S  +  + ++  +  SI+  I  +I +   I      + ND   P+   N 
Sbjct: 39  WQIWESRNRSIFRGETIDEQQLDRSIVLFINSNIDKGTCISQTRRSQQNDGYLPRGRENL 98

Query: 62  QVSQVQWQLPSVNGWKMNSNASWFDSSSVGGIGWVVHDSIGSLICFGFQKITRNWGIKVL 121
            +  V+W  P  N WK+N++ASW +   VGGIGW++ D  G ++  G  KI     I  L
Sbjct: 99  NMLGVRWSAPPTNCWKLNTDASWSEEREVGGIGWILCDCRGEIVLAGNCKIREKKEINAL 158

Query: 122 EAKAILVGIKVISNTCIQKKIPMEFESDSLEVVRSFRGEDEDLS 158
           E   I+ G++ I+   +Q + P+  ESDS+EV+R  + ED DL+
Sbjct: 159 ELMTIIRGLQFIN---MQSRSPIYLESDSVEVIRLMKKEDVDLT 199

[Close]

BLAST of Lag0038511 vs. ExPASy TrEMBL
Match: A0A3P6ESY2 (RNase H domain-containing protein (Fragment) OS=Brassica oleracea OX=3712 GN=BOLC7T41032H PE=4 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 4.7e-12
Identity = 55/202 (27.23%), Postives = 95/202 (47.03%), Query Frame = 0


Query: 1   MWHIWNFRNKSRDQIYSHNKLAVVDSIIKAIEGSISEWEG-IYLKSNDPKRLGNQVSQVQ 60
           MW +W  RN     ++  N      +I K  E  + EW     +K  + K        V+
Sbjct: 364 MWRLWKNRNTF---VFRGNDHDAALTIWKVWE-DVFEWTSRAEVKEQEVKEPTAPKPDVK 423

Query: 61  WQLPSVNGWKMNSNASWFDSSSVGGIGWVVHDSIGSLICFGFQKITRNWGIKVLEAKAIL 120
           W+ P+    K N++A+W      GG GW++ D  G LI  G +K+         EA+A+ 
Sbjct: 424 WRPPAERYLKCNTDAAWLKEERSGGAGWILRDHRGRLIWAGAKKLAEVRSAIEAEAEAVW 483

Query: 121 VGIKVISNTCIQKKIPMEFESDSLEVVRSFRGEDEDLSELKPVVEEILCVSSKLESATFL 180
             ++ ++     +   ++ E+DSL+++R   GE+E    L+P+++EI  + S  E  T +
Sbjct: 484 WALQTVTGFGYDR---VQIETDSLQLMRMINGEEETWPLLEPIIQEIAALMSVREEITVV 543

Query: 181 HCNRHANAVAHWLARKAIVFCS 202
           +  R  N  A  +AR+   F S
Sbjct: 544 YYPRSGNKTADRIARETSTFTS 558

[Close]

BLAST of Lag0038511 vs. TAIR 10
Match: AT2G34320.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 65.1 bits (157), Expect = 8.7e-11
Identity = 51/202 (25.25%), Postives = 92/202 (45.54%), Query Frame = 0


Query: 1   MWHIWNFRNKSRDQIYSHNKLAVVDSIIKAIEGSISEWEGIYLKSNDPKRLGNQVSQ--- 60
           +W +W    KSR+++    K      +++       EW     +  + K  G QV +   
Sbjct: 81  LWRLW----KSRNELMFKGKEYDAPEVLRRAMEDFEEWS--TRRELEGKASGPQVERNLS 140

Query: 61  VQWQLPSVNGWKMNSNASWFDSSSVGGIGWVVHDSIGSLICFGFQKITRNWGIKVLEAKA 120
           VQW+ P     K N++A+W   +   GIGW++ +  G ++  G + + R   +   E +A
Sbjct: 141 VQWKAPPYQWVKCNTDATWQLENPRCGIGWILRNESGGVLWMGARALPRTKNVLEAELEA 200

Query: 121 ILVGIKVISNTCIQKKIPMEFESDSLEVVRSFRGEDEDLSELKPVVEEILCVSSKLESAT 180
           +   +  +S    ++ I   FESD+  +V +    D+    L+P +E+I  +    E   
Sbjct: 201 LRWAVLTMSRFNYKRII---FESDAQALV-NLLNSDDFWPTLQPALEDIQQLLHHFEEVK 260

Query: 181 FLHCNRHANAVAHWLARKAIVF 200
           F    R  N VA  +AR++I F
Sbjct: 261 FEFTPRGGNKVADRIARESISF 272

[Close]

BLAST of Lag0038511 vs. TAIR 10
Match: AT5G65005.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 54.3 bits (129), Expect = 1.5e-07
Identity = 46/199 (23.12%), Postives = 86/199 (43.22%), Query Frame = 0


Query: 1   MWHIWNFRNKSRDQIYSHNKLAVVDSIIKAIEGSISEW--EGIYLKSNDPKRLGNQVSQV 60
           MW IW   N   D +++H +     ++  A+  +  EW    +  +  +  R  +     
Sbjct: 48  MWRIWKSGN---DLVFNHTRTKFQTTVEMALNDT-KEWLDNTMTNEQQNGNRNADPSRNT 107

Query: 61  QWQLPSVNGWKMNSNASWFDSSSVGGIGWVVHDSIGSLICFGFQKITRNWGIKVLEAKAI 120
           +W  P  +  K N +AS  + ++V G+GW++ +S G++I  G  K       +  E   +
Sbjct: 108 KWSPPGRDKLKCNYDASHHERNTVSGLGWILRNSQGTVIECGMGKFQGRMTTEEAECSTL 167

Query: 121 LVGIKVISNTCIQKKIPMEFESDSLEVVRSFRGEDEDLSELKPVVEEILCVSSKLESATF 180
           +  I+       +K I   FE D+  + R    +  +   L+  ++ I       ES  F
Sbjct: 168 IWAIQASYGFGHKKVI---FEGDNQTITRMINTKSSN-PRLQHFLDTIQSWIPSFESIEF 227

Query: 181 LHCNRHANAVAHWLARKAI 198
              +R  N  A +LA++AI
Sbjct: 228 SFKHREQNGCADFLAKQAI 238

[Close]

BLAST of Lag0038511 vs. TAIR 10
Match: AT3G23320.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 46.2 bits (108), Expect = 4.2e-05
Identity = 41/163 (25.15%), Postives = 71/163 (43.56%), Query Frame = 0


Query: 37  EWEGIYLKSNDPKRLGNQVSQ--VQWQLPSVNGWKMNSNASWFDSSSVGGIGWVVHDSIG 96
           EW  +  K++D  + G   S    +WQ P     K N + S        G+ W++ +S G
Sbjct: 5   EWLDVKHKNDDNVKGGQTKSSRTDKWQKPGAEWVKCNYDVSNHAGRQDSGLRWIIRNSQG 64

Query: 97  SLICFGFQKITRNWGIKVLEAKAILVGIKVISNTCIQKKIPMEFESDSLEVVRSFRGEDE 156
           + +  G  K      IK  E  A++  I+   +   ++   +EFE D++ V R  R ++ 
Sbjct: 65  TCLDCGCGKFQGRQTIKEAECTALIWAIQCAWDLGYRR---VEFEGDNITVNRLIRNKET 124

Query: 157 DLSELKPVVEEILCVSSKLESATFLHCNRHANAVAHWLARKAI 198
           +   L+  +E I   S    +  F   +R  N     LA+KA+
Sbjct: 125 N-PRLRYYLEFIQQWSKAFTTVKFTFRHREQNVCVDVLAKKAV 163

[Close]

BLAST of Lag0038511 vs. TAIR 10
Match: AT1G52990.1 (thioredoxin family protein )

HSP 1 Score: 42.7 bits (99), Expect = 4.6e-04
Identity = 36/129 (27.91%), Postives = 56/129 (43.41%), Query Frame = 0


Query: 69  KMNSNASWFDSSSVGGIGWVVHDSIGSLICFGFQKITRNWGIKVLEAKAILVGIKVISNT 128
           K N +AS  +   V G+GW++ +S G+++  G  K       +  E  A++  I+  S  
Sbjct: 49  KCNYDASHHEGDVVSGLGWLIRNSQGTVLECGMGKFQGRMTPEEAECSALIWAIQATSAF 108

Query: 129 CIQKKIPMEFESDSLEVVRSFRGEDEDLSELKPVVEEILCVSSKLESATFLHCNRHANAV 188
              K I   FE D+  V R    +  D   LK  ++ I        S  F+  +R  N  
Sbjct: 109 GYTKVI---FEGDNSNVNRLINTK-SDNPRLKHYLDTIKSWIPSFTSTEFIFTHREQNQC 168

Query: 189 AHWLARKAI 198
           A  L +KAI
Sbjct: 169 ADTLVKKAI 173

[Close]

BLAST of Lag0038511 vs. TAIR 10
Match: AT3G09510.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 42.0 bits (97), Expect = 7.9e-04
Identity = 43/197 (21.83%), Postives = 84/197 (42.64%), Query Frame = 0


Query: 1   MWHIWNFRNKSRDQIYSHNKLAVVDSIIKAIEGSISEWEGI---YLKSNDPKRLGNQVSQ 60
           +W IW  RN   + +++  + +   +++ A +    +W      + K+  P R   + ++
Sbjct: 269 IWRIWKARN---NVVFNKFRESPSKTVLSA-KAETHDWLNATQSHKKTPSPTRQIAE-NK 328

Query: 61  VQWQLPSVNGWKMNSNASWFDSSSVGGIGWVVHDSIGSLICFGFQKITRNWGIKVLEAKA 120
           ++W+ P     K N +A +         GW++ +  G+ I +G  K+         E KA
Sbjct: 329 IEWRNPPATYVKCNFDAGFDVQKLEATGGWIIRNHYGTPISWGSMKLAHTSNPLEAETKA 388

Query: 121 ILVGIKVISNTCIQKKIPMEFESDSLEVVRSFRGEDEDLSELKPVVEEILCVSSKLESAT 180
           +L  ++    T I+    +  E D   ++    G     S L   +E+I   ++K  S  
Sbjct: 389 LLAALQ---QTWIRGYTQVFMEGDCQTLINLINGISFH-SSLANHLEDISFWANKFASIQ 448

Query: 181 FLHCNRHANAVAHWLAR 195
           F    R  N +AH LA+
Sbjct: 449 FGFIRRKGNKLAHVLAK 456

The following BLAST results are available for this feature:

BLAST of Lag0038511 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022143535.1	2.2e-16	31.34	uncharacterized protein LOC111013412 [Momordica charantia]	[more]
XP_022155262.1	6.5e-16	31.34	uncharacterized protein LOC111022403 [Momordica charantia]	[more]
XP_022156777.1	5.5e-15	32.06	uncharacterized protein LOC111023608 [Momordica charantia]	[more]
XP_019095662.1	1.1e-12	27.59	PREDICTED: uncharacterized protein LOC104763574 [Camelina sativa]	[more]
XP_022143317.1	1.1e-12	33.54	uncharacterized protein LOC111013216 [Momordica charantia]	[more]

BLAST of Lag0038511 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Lag0038511 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CP26	1.1e-16	31.34	uncharacterized protein LOC111013412 OS=Momordica charantia OX=3673 GN=LOC111013...	[more]
A0A6J1DNV9	3.1e-16	31.34	uncharacterized protein LOC111022403 OS=Momordica charantia OX=3673 GN=LOC111022...	[more]
A0A6J1DSV1	2.6e-15	32.06	uncharacterized protein LOC111023608 OS=Momordica charantia OX=3673 GN=LOC111023...	[more]
A0A6J1CQG0	5.5e-13	33.54	uncharacterized protein LOC111013216 OS=Momordica charantia OX=3673 GN=LOC111013...	[more]
A0A3P6ESY2	4.7e-12	27.23	RNase H domain-containing protein (Fragment) OS=Brassica oleracea OX=3712 GN=BOL...	[more]

BLAST of Lag0038511 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G34320.1	8.7e-11	25.25	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT5G65005.1	1.5e-07	23.12	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT3G23320.1	4.2e-05	25.15	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT1G52990.1	4.6e-04	27.91	thioredoxin family protein	[more]
AT3G09510.1	7.9e-04	21.83	Ribonuclease H-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 68..199 e-value: 6.2E-10 score: 41.1
IPR002156	Ribonuclease H domain	PFAM	PF13456	RVT_3	coord: 71..196 e-value: 3.3E-20 score: 72.1
None	No IPR available	PANTHER	PTHR47723	OS05G0353850 PROTEIN	coord: 49..198
IPR044730	Ribonuclease H-like domain, plant type	CDD	cd06222	RNase_H_like	coord: 71..194 e-value: 6.89802E-16 score: 69.6504
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 68..198

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0038511.1	Lag0038511.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0004523	RNA-DNA hybrid ribonuclease activity