Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTTCTTCTTCTTTAATGGCGTTCCTTGTTATGGCAGTTTTGGTGGCATCCTTAAGCTTGCCATCTGCAACTGGCCAAGGCTATGATTCCTCTCCTCCACCTCCACCTGTTAGTTATTCTCCTCCACCACCAGTTTACTACTATCCTCCACCGCCTCGTAAGAATGACGATGAGTATAAGTCTCCTCCGCCGCCACCAAAGAAGAACGAAGACAAGTCACCACCTCCACCACCACCAAAAAAGAACGAAGACAAGTCGCCACCTCCTCCACCACCAAAGAAGAACGAAGGCAAGTCGCCTCCACCTCCACCACCAAAGAAGAATGAAGAGAAGTCGCCGCCTCCGCCTCCACCAAAGAAGAACGAAGGCAAGTCACCTCCACCACCACCAAAGAAGAAGGAAGACAAGTCGCCGCCTCCACCACCATCACCAAAGAAGTCTCCTCCACCGCCGCCACCAAGGAAGTCATTGCGTCCACCACCACCACCCAAAAAGTCTCCACCACCGCCACCTCCAAAGAAGTCGCCACCTCCACCACCACCAAAGAAGTATCCTCCACCAAGTGATTACGAGTACAAGTCTCCTCCTCCTCCGCCATATCCTTACTAA
mRNA sequence
ATGGGTTCTTCTTCTTTAATGGCGTTCCTTGTTATGGCAGTTTTGGTGGCATCCTTAAGCTTGCCATCTGCAACTGGCCAAGGCTATGATTCCTCTCCTCCACCTCCACCTGTTAGTTATTCTCCTCCACCACCAGTTTACTACTATCCTCCACCGCCTCGTAAGAATGACGATGAGTATAAGTCTCCTCCGCCGCCACCAAAGAAGAACGAAGACAAGTCACCACCTCCACCACCACCAAAAAAGAACGAAGACAAGTCGCCACCTCCTCCACCACCAAAGAAGAACGAAGGCAAGTCGCCTCCACCTCCACCACCAAAGAAGAATGAAGAGAAGTCGCCGCCTCCGCCTCCACCAAAGAAGAACGAAGGCAAGTCACCTCCACCACCACCAAAGAAGAAGGAAGACAAGTCGCCGCCTCCACCACCATCACCAAAGAAGTCTCCTCCACCGCCGCCACCAAGGAAGTCATTGCGTCCACCACCACCACCCAAAAAGTCTCCACCACCGCCACCTCCAAAGAAGTCGCCACCTCCACCACCACCAAAGAAGTATCCTCCACCAAGTGATTACGAGTACAAGTCTCCTCCTCCTCCGCCATATCCTTACTAA
Coding sequence (CDS)
ATGGGTTCTTCTTCTTTAATGGCGTTCCTTGTTATGGCAGTTTTGGTGGCATCCTTAAGCTTGCCATCTGCAACTGGCCAAGGCTATGATTCCTCTCCTCCACCTCCACCTGTTAGTTATTCTCCTCCACCACCAGTTTACTACTATCCTCCACCGCCTCGTAAGAATGACGATGAGTATAAGTCTCCTCCGCCGCCACCAAAGAAGAACGAAGACAAGTCACCACCTCCACCACCACCAAAAAAGAACGAAGACAAGTCGCCACCTCCTCCACCACCAAAGAAGAACGAAGGCAAGTCGCCTCCACCTCCACCACCAAAGAAGAATGAAGAGAAGTCGCCGCCTCCGCCTCCACCAAAGAAGAACGAAGGCAAGTCACCTCCACCACCACCAAAGAAGAAGGAAGACAAGTCGCCGCCTCCACCACCATCACCAAAGAAGTCTCCTCCACCGCCGCCACCAAGGAAGTCATTGCGTCCACCACCACCACCCAAAAAGTCTCCACCACCGCCACCTCCAAAGAAGTCGCCACCTCCACCACCACCAAAGAAGTATCCTCCACCAAGTGATTACGAGTACAAGTCTCCTCCTCCTCCGCCATATCCTTACTAA
Protein sequence
MGSSSLMAFLVMAVLVASLSLPSATGQGYDSSPPPPPVSYSPPPPVYYYPPPPRKNDDEYKSPPPPPKKNEDKSPPPPPPKKNEDKSPPPPPPKKNEGKSPPPPPPKKNEEKSPPPPPPKKNEGKSPPPPPKKKEDKSPPPPPSPKKSPPPPPPRKSLRPPPPPKKSPPPPPPKKSPPPPPPKKYPPPSDYEYKSPPPPPYPY
Homology
BLAST of Lag0038508 vs. NCBI nr
Match:
XP_022976649.1 (extensin-3-like [Cucurbita maxima])
HSP 1 Score: 114.8 bits (286), Expect = 8.9e-22
Identity = 120/191 (62.83%), Postives = 129/191 (67.54%), Query Frame = 0
Query: 34 PPPPVSYSPPPPVYYYPPPPRKNDDEYKSPPPPPKKNEDKSPPPPPPKKN------EDKS 93
PPPPV YS PPP YY PPP K DDEYKSPPPP K KSPPPPPP+K KS
Sbjct: 492 PPPPVKYSSPPPPAYYSPPPPKKDDEYKSPPPPEVK---KSPPPPPPRKKPPPPPAPKKS 551
Query: 94 PPPPPPKKNE------GKSPPPPPPKKNE------EKSPPPPPPKKNE------GKSPPP 153
PPPPPP+K KSPPPPPP+K +KSPPPPPP+K KSPPP
Sbjct: 552 PPPPPPRKKSPPPPAPKKSPPPPPPRKKSPPPPAPKKSPPPPPPRKKSPPPPAPKKSPPP 611
Query: 154 PPKKKEDKSPPPPPSPKKSPPPPPPRKSLRPPPPPKKSPPPPPPKKSPPPPPPKKYPPPS 201
PP +K+ PPPP+PKKSPPPPPPRK PPPPPKKSPPPP PKKSPPPPPP+K PPP
Sbjct: 612 PPPRKKS---PPPPAPKKSPPPPPPRKKSPPPPPPKKSPPPPSPKKSPPPPPPRKKPPPP 671
BLAST of Lag0038508 vs. NCBI nr
Match:
KAG6592193.1 (hypothetical protein SDJN03_14539, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 104.0 bits (258), Expect = 1.6e-18
Identity = 126/204 (61.76%), Postives = 137/204 (67.16%), Query Frame = 0
Query: 1 MGSSSLMAFLVMAVLVASLSLPSATGQGYDS-SPPPPPVSYSPPPPVYYYPPPPRKNDDE 60
M S++ LV+ V V +LSL S + +GYD PPPPV YSPPPPV Y PP
Sbjct: 1 MSPPSIIVHLVIVVFVVALSLSSTSAEGYDDYYSPPPPVYYSPPPPVKYSSPP-----RV 60
Query: 61 YKSPPPPPKKNEDKSPPPPPPKKNEDKSPPPPPPKKNEGKSPPPPPPKKNEEKSPPPPPP 120
Y SPPPP K +EDKSPPPPPPK K+PPPP K KSPPPPPP+K KSPPPP P
Sbjct: 61 YYSPPPPKKDDEDKSPPPPPPK----KTPPPPEVK----KSPPPPPPRK---KSPPPPAP 120
Query: 121 KKNEGKSPPPPPKKKEDKSPPPPPSPKKSPPPPPPRKSLRPPPPPKKSPPPPPPKKSPPP 180
K KSPPPPP +K KSPPP PKKSPPPPPP K PPPPP+K PPPPPKKSPP
Sbjct: 121 K----KSPPPPPPRK--KSPPP---PKKSPPPPPPPKK-SPPPPPQKKSPPPPPKKSPPQ 178
Query: 181 PPPKKYPPPSDYEYKSPPPPPYPY 204
P PKK PPP EYK PPPPP PY
Sbjct: 181 PEPKKSPPPPSPEYKWPPPPPSPY 178
BLAST of Lag0038508 vs. NCBI nr
Match:
XP_023535874.1 (extensin-3-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 102.8 bits (255), Expect = 3.5e-18
Identity = 123/204 (60.29%), Postives = 137/204 (67.16%), Query Frame = 0
Query: 1 MGSSSLMAFLVMAVLVASLSLPSATGQGYDS-SPPPPPVSYSPPPPVYYYPPPPRKNDDE 60
MG S++ LV+AV VA+LSL + + +GYD PPPPV YSPPPPV Y PP
Sbjct: 1 MGPPSIIVHLVIAVFVAALSLSTTSAEGYDDYYSPPPPVYYSPPPPVKYSSPP-----RV 60
Query: 61 YKSPPPPPKKNEDKSPPPPPPKKNEDKSPPPPPPKKNEGKSPPPPPPKKNEEKSPPPPPP 120
Y SPPPP K +EDKSPPPP PKK+ PPPP+ KSPPPPPP+K KSPPPP P
Sbjct: 61 YYSPPPPKKDDEDKSPPPPSPKKSPPPKKTPPPPEVK--KSPPPPPPRK---KSPPPPAP 120
Query: 121 KKNEGKSPPPPPKKKEDKSPPPPPSPKKSPPPPPPRKSLRPPPPPKKSPPPPPPKKSPPP 180
KK+ PPPPP+KK PPPPSPKKSPPPPPP+KS PPPPPKKSPP PKKSPPP
Sbjct: 121 KKS---PPPPPPRKKS----PPPPSPKKSPPPPPPKKS--PPPPPKKSPPRSEPKKSPPP 176
Query: 181 PPPKKYPPPSDYEYKSPPPPPYPY 204
P P EYK PPPPP PY
Sbjct: 181 PSP---------EYKWPPPPPSPY 176
BLAST of Lag0038508 vs. NCBI nr
Match:
XP_022039692.1 (extensin-3-like [Helianthus annuus] >KAF5807649.1 hypothetical protein HanXRQr2_Chr05g0235981 [Helianthus annuus])
HSP 1 Score: 101.3 bits (251), Expect = 1.0e-17
Identity = 139/238 (58.40%), Postives = 151/238 (63.45%), Query Frame = 0
Query: 10 LVMAVLVASLSLPSATGQGYDSSPPPPPVSYS--------------PPPPVYYYPPPPRK 69
+ + V++ SLS PS T Y S PPPP S PPPPVY PPPP K
Sbjct: 17 ITLLVVIVSLSFPSLTTANYPYSSPPPPTKKSPPPPTPHYLYKSPPPPPPVYKSPPPPPK 76
Query: 70 NDDEYKSPPPPPKKNE-DKSPPPPPPKKN-EDKSPPPPPPKKN-EGKSPPPPPPKKN-EE 129
+YKSPPPPPK + KSPPPPPPKK+ E KSPPPP PKK+ E KSPPPPPPKK+
Sbjct: 77 KPYKYKSPPPPPKTHYIYKSPPPPPPKKHYEYKSPPPPLPKKHYEYKSPPPPPPKKHYYY 136
Query: 130 KSPPPPPPKKN-EGKSPPPPPKKK--EDKSPPPPPSPK----KSPPPPPPR---KSLRPP 189
KSPPPPPPKK+ E KSPPPPP K + KSPPPPP K KSPPPPPP+ K PP
Sbjct: 137 KSPPPPPPKKHYEYKSPPPPPPKTHYKYKSPPPPPPKKHYEYKSPPPPPPKTHYKYKSPP 196
Query: 190 PPPK-----KSPPPPPPK-----KSPPPPPPK---KY------PPPSDYEYKSPPPPP 201
PPPK KSPPPPPPK KSPPPPPPK KY PP YEYKSPPPPP
Sbjct: 197 PPPKKHYEYKSPPPPPPKKHYEYKSPPPPPPKTHYKYKSPPPPPPKKHYEYKSPPPPP 254
BLAST of Lag0038508 vs. NCBI nr
Match:
KAG7025048.1 (hypothetical protein SDJN02_13871, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 97.8 bits (242), Expect = 1.1e-16
Identity = 122/204 (59.80%), Postives = 132/204 (64.71%), Query Frame = 0
Query: 1 MGSSSLMAFLVMAVLVASLSLPSATGQGYDS-SPPPPPVSYSPPPPVYYYPPPPRKNDDE 60
M S++ LV+AV V +LSL S + +GYD PPPPV YSPPPPV Y PP
Sbjct: 1 MSPPSIIVHLVIAVFVVALSLSSTSAEGYDEYYSPPPPVYYSPPPPVKYSSPP-----RV 60
Query: 61 YKSPPPPPKKNEDKSPPPPPPKKNEDKSPPPPPPKKNEGKSPPPPPPKKNEEKSPPPPPP 120
Y SPPPP K +EDKSPPPPPPKK PPPP+ KSPPPP PK KSPPPPPP
Sbjct: 61 YYSPPPPKKDDEDKSPPPPPPKKT------PPPPE----KSPPPPAPK----KSPPPPPP 120
Query: 121 KKNEGKSPPPPPKKKEDKSPPPPPSPKKSPPPPPPRKSLRPPPPPKKSPPPPPPKKSPPP 180
+K KSPPPP KSPPPPP PKKSPPPPP +KS PPPPPKKSPP PKKSPPP
Sbjct: 121 RK---KSPPPP-----KKSPPPPPPPKKSPPPPPQKKS--PPPPPKKSPPRSEPKKSPPP 166
Query: 181 PPPKKYPPPSDYEYKSPPPPPYPY 204
P P EYK PPPPP PY
Sbjct: 181 PSP---------EYKWPPPPPSPY 166
BLAST of Lag0038508 vs. ExPASy TrEMBL
Match:
A0A6J1IP49 (extensin-3-like OS=Cucurbita maxima OX=3661 GN=LOC111476988 PE=4 SV=1)
HSP 1 Score: 114.8 bits (286), Expect = 4.3e-22
Identity = 120/191 (62.83%), Postives = 129/191 (67.54%), Query Frame = 0
Query: 34 PPPPVSYSPPPPVYYYPPPPRKNDDEYKSPPPPPKKNEDKSPPPPPPKKN------EDKS 93
PPPPV YS PPP YY PPP K DDEYKSPPPP K KSPPPPPP+K KS
Sbjct: 492 PPPPVKYSSPPPPAYYSPPPPKKDDEYKSPPPPEVK---KSPPPPPPRKKPPPPPAPKKS 551
Query: 94 PPPPPPKKNE------GKSPPPPPPKKNE------EKSPPPPPPKKNE------GKSPPP 153
PPPPPP+K KSPPPPPP+K +KSPPPPPP+K KSPPP
Sbjct: 552 PPPPPPRKKSPPPPAPKKSPPPPPPRKKSPPPPAPKKSPPPPPPRKKSPPPPAPKKSPPP 611
Query: 154 PPKKKEDKSPPPPPSPKKSPPPPPPRKSLRPPPPPKKSPPPPPPKKSPPPPPPKKYPPPS 201
PP +K+ PPPP+PKKSPPPPPPRK PPPPPKKSPPPP PKKSPPPPPP+K PPP
Sbjct: 612 PPPRKKS---PPPPAPKKSPPPPPPRKKSPPPPPPKKSPPPPSPKKSPPPPPPRKKPPPP 671
BLAST of Lag0038508 vs. ExPASy TrEMBL
Match:
A0A251U7B1 (Putative extensin 3 OS=Helianthus annuus OX=4232 GN=ATEXT3 PE=4 SV=1)
HSP 1 Score: 90.5 bits (223), Expect = 8.7e-15
Identity = 131/225 (58.22%), Postives = 139/225 (61.78%), Query Frame = 0
Query: 4 SSLMAFLVMAVLVASLSLPSATGQGYD-SSPPPPPVSY------SPPPPVYYYPPPPRKN 63
SS++ LV V+V S PS T Y SSPPPPP + PPPP PPPP K+
Sbjct: 8 SSIVTLLVTLVVVILSSFPSLTTANYPYSSPPPPPKEHYVYKSPPPPPPKKSPPPPPPKH 67
Query: 64 DDEYKSPPPPPKKNE--DKSPPPPPPKKN-EDKSPPPPPPKKNEGKSPPPPPPKKNEEKS 123
YKSPPPPP K KSPPPPPPK++ KSPPPPPPK KSPPPPP KS
Sbjct: 68 PYVYKSPPPPPPKEHYVYKSPPPPPPKEHYVYKSPPPPPPK----KSPPPPPKHHYVYKS 127
Query: 124 PPPPPPKKNEGKSPPPPPKKKEDKSPPPPPSPK-----KSPPPPPPRKSLRPPPPPK--- 183
PPPPPPK KSPPPPPK PPPP PK KSPPPPPP+KS PPPPPK
Sbjct: 128 PPPPPPK----KSPPPPPKHHYVYKSPPPPPPKEHYVYKSPPPPPPKKS--PPPPPKHHY 187
Query: 184 --KSPPPPPPK-----KSPPPPPPKKYPPP---SDYEYKSPPPPP 201
KSPPPPPPK KSPPPPPPKK PPP Y YKSPPPPP
Sbjct: 188 VYKSPPPPPPKEHYVYKSPPPPPPKKSPPPPPKHHYVYKSPPPPP 222
BLAST of Lag0038508 vs. ExPASy TrEMBL
Match:
A0A4V3WQ10 (Uncharacterized protein OS=Camellia sinensis var. sinensis OX=542762 GN=TEA_022275 PE=4 SV=1)
HSP 1 Score: 89.4 bits (220), Expect = 1.9e-14
Identity = 136/240 (56.67%), Postives = 145/240 (60.42%), Query Frame = 0
Query: 2 GSSSLMAFLVMAVLVA--SLSLPSATGQGYD-SSPPPPPVSYSPPPPVYYY-----PPP- 61
G S MA L+ VL+A SLSLP T Y+ SSPPPP S PPPP YYY PPP
Sbjct: 7 GRRSAMASLITTVLLAVVSLSLPLETTANYNYSSPPPPKKSPPPPPPPYYYKSPPPPPPV 66
Query: 62 ---PRKNDDEYKSPPPPPKKNEDKSPPPPPPKKNEDKSPPPPPPKKNEGKSPPPPPPKKN 121
P + +YKSPPPPP + KSPPPPPP + KSPPPPPPKK S PPPPP K
Sbjct: 67 HYSPPSHPYKYKSPPPPPPVYKYKSPPPPPPPVYKYKSPPPPPPKKPYKYSSPPPPPYK- 126
Query: 122 EEKSPPPPPPKKNEGKSPPPPPKKKEDK--SPPPPPSPKKSPPPPPP-RKSLRPPPPPK- 181
KSPPPPPP + KSPPPPP KK K SPPPPP KSPPPPPP K PPPPPK
Sbjct: 127 -YKSPPPPPP-VYKYKSPPPPPPKKPYKYSSPPPPPYKYKSPPPPPPVYKYKSPPPPPKE 186
Query: 182 --------------KSPPPPPP---KKSPPPPPPKK-----YPPPSDYEYKSPPPPPYPY 204
KSPPPPPP KSPPPPPPKK PPP Y+YKSPPPPP Y
Sbjct: 187 PYKYSSPPPPPYKYKSPPPPPPVYKYKSPPPPPPKKPYKYSSPPPPPYKYKSPPPPPPVY 243
BLAST of Lag0038508 vs. ExPASy TrEMBL
Match:
A0A5N5I4V5 (Extensin-3-like OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D8674_025769 PE=4 SV=1)
HSP 1 Score: 89.4 bits (220), Expect = 1.9e-14
Identity = 129/217 (59.45%), Postives = 136/217 (62.67%), Query Frame = 0
Query: 22 PSATGQGYDS-SPPPPPVSYSPPPP--VYYY--PPPPRKNDDEYKSPPPPPKK-NEDKSP 81
PS Y S PPPPP+ +SPPPP Y+Y PPPP K YKSPPPP KK KSP
Sbjct: 75 PSPKPYHYKSPPPPPPPLVHSPPPPKEPYHYKSPPPPPKKPYHYKSPPPPRKKPYHYKSP 134
Query: 82 PPPPPKK-NEDKSPPPPPPKK-NEGKSPPPPPPKK--NEEKSPPPPPPKKNEGKSPPPPP 141
PPPPPKK + KSPPPPPPKK N KSPPPPPPKK + + SPPPPP K KSPPPPP
Sbjct: 135 PPPPPKKPHHHKSPPPPPPKKPNHYKSPPPPPPKKPHHHKSSPPPPPKKPYHYKSPPPPP 194
Query: 142 KKK--EDKSPPPPPSPK---KSPPPPPPRK----SLRPPPPPK-----KSPPPPPPK--- 201
KK KSPPPPP KSPPPPPP+K PPPPPK KSPPPPPPK
Sbjct: 195 PKKPHHHKSPPPPPKKPYHYKSPPPPPPKKPHHHKSPPPPPPKKPYHYKSPPPPPPKKPH 254
BLAST of Lag0038508 vs. ExPASy TrEMBL
Match:
A0A5J5B5J7 (Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_027540 PE=4 SV=1)
HSP 1 Score: 84.7 bits (208), Expect = 4.8e-13
Identity = 128/231 (55.41%), Postives = 144/231 (62.34%), Query Frame = 0
Query: 1 MGSSSLMAFLVMAVLVASLSLPSAT--GQGYDSSPPPPPVSYSPPPPVYYY----PPPPR 60
MGS+ + +++ SLSLPS T Y S PPPPP Y PPPP +YY PPPP
Sbjct: 6 MGSTMASLITTLLMVIVSLSLPSKTTAKYPYSSPPPPPPKKYPPPPPPHYYYKSPPPPPP 65
Query: 61 KNDDE-----YKSPPPPPKKNEDKSPPPPPPKK--NEDKSPPPPPPKKNEGKSPPPPPPK 120
+ YKSPPPPP + KSPPPPPPK+ + KSPPPPPP KSPPPPPPK
Sbjct: 66 VHSPPPPPPVYKSPPPPPPVH--KSPPPPPPKEPPYKYKSPPPPPPVH---KSPPPPPPK 125
Query: 121 K-NEEKSPPPPPPKKNEGKSPPPPPKKK--EDKSPPPPPSPKKSPPPPPPR-----KSLR 180
+ + KSPPPPPP KSPPPPP K+ + KSPPPPP KSPPPPPP+ KS
Sbjct: 126 EPYKYKSPPPPPPVH---KSPPPPPPKEPYKYKSPPPPPPVHKSPPPPPPKEPYKYKSPP 185
Query: 181 PPPPPKKSPPPPPPK-----KSPPPPPP--KKYPPP---SDYEYKSPPPPP 201
PPPP KSPPPPPPK KSPPPPPP K PPP Y+Y SPPPPP
Sbjct: 186 PPPPVHKSPPPPPPKEPYKYKSPPPPPPVHKSPPPPPPKKPYKYTSPPPPP 228
BLAST of Lag0038508 vs. TAIR 10
Match:
AT1G26250.1 (Proline-rich extensin-like family protein )
HSP 1 Score: 44.3 bits (103), Expect = 1.4e-04
Identity = 104/190 (54.74%), Postives = 105/190 (55.26%), Query Frame = 0
Query: 29 YDSSPPPPPVSYSPPPPVYYY--PPPPRKNDDEYKSPPPPPKKNEDKSPPP-----PPPK 88
Y S PPPP V SPPPP Y Y PPPP YKSPPPPP PPP PPP
Sbjct: 97 YSSPPPPPYVYKSPPPPPYVYSSPPPP---PYVYKSPPPPPYVYSSPPPPPYVYSSPPPP 156
Query: 89 KNEDKSPPPPPPKKNEGKSPPPPPPKKNEEKSPPP-----PPPKKNEGKSPPPPPKKKED 148
KSPPPPP SPPPPPP + PPP PPP KSPPPPP
Sbjct: 157 PYVYKSPPPPP----YVYSPPPPPPYVYQSPPPPPYVYSSPPPPPYVYKSPPPPPYVY-- 216
Query: 149 KSPPPPPSPKKSPPPPPPRKSLRPPPP-PKKSPPPPPPKKSPPPPPPKKY--PPPSDYEY 204
SPPPPP KSPPPPP S PPPP KSPPPPP S PPPPP Y PPP Y Y
Sbjct: 217 SSPPPPPYVYKSPPPPPYVYSSPPPPPYVYKSPPPPPYVYSSPPPPPYVYKSPPPPPYVY 276
BLAST of Lag0038508 vs. TAIR 10
Match:
AT5G07740.1 (actin binding )
HSP 1 Score: 43.9 bits (102), Expect = 1.8e-04
Identity = 96/210 (45.71%), Postives = 108/210 (51.43%), Query Frame = 0
Query: 18 SLSLPSATGQGYDSSPPPPPVSYS------PPPPVYYYPPPPRKNDDEYKS--PPPPPKK 77
S+ P G PPPPP SY PPPP Y PPPP Y S PPPPP
Sbjct: 965 SVLSPPPPSYGSPPPPPPPPPSYGSPPPPPPPPPSYGSPPPPPPPPPGYGSPPPPPPPPP 1024
Query: 78 NEDKSPPPPPPKKNEDKS--PPPPPPKKNEGKSPPPPPPKKNEEKSPPPPPPKKNEGKSP 137
+ PPPPPP + S PPPPPP + G PPPPPP + PPPPPP + G P
Sbjct: 1025 SYGSPPPPPPPPFSHVSSIPPPPPPPPMHGGAPPPPPPPPMHGGAPPPPPPPPMHGGAPP 1084
Query: 138 PPPPKKKEDKSPPPPPSPK---KSPPPPPPRKSLRPPPPPK-----KSPPPPPPKK--SP 197
PPPP +PPPPP P PPPPPP + PPPPP PPPPPP + +P
Sbjct: 1085 PPPPPPMHGGAPPPPPPPMFGGAQPPPPPPMRGGAPPPPPPPMRGGAPPPPPPPMRGGAP 1144
Query: 198 PPPPPKKY-----PPPSDYEYKSPPPPPYP 203
PPPPP + PPP +PPPPP P
Sbjct: 1145 PPPPPPMHGGAPPPPPPPMRGGAPPPPPPP 1174
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022976649.1 | 8.9e-22 | 62.83 | extensin-3-like [Cucurbita maxima] | [more] |
KAG6592193.1 | 1.6e-18 | 61.76 | hypothetical protein SDJN03_14539, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
XP_023535874.1 | 3.5e-18 | 60.29 | extensin-3-like [Cucurbita pepo subsp. pepo] | [more] |
XP_022039692.1 | 1.0e-17 | 58.40 | extensin-3-like [Helianthus annuus] >KAF5807649.1 hypothetical protein HanXRQr2_... | [more] |
KAG7025048.1 | 1.1e-16 | 59.80 | hypothetical protein SDJN02_13871, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1IP49 | 4.3e-22 | 62.83 | extensin-3-like OS=Cucurbita maxima OX=3661 GN=LOC111476988 PE=4 SV=1 | [more] |
A0A251U7B1 | 8.7e-15 | 58.22 | Putative extensin 3 OS=Helianthus annuus OX=4232 GN=ATEXT3 PE=4 SV=1 | [more] |
A0A4V3WQ10 | 1.9e-14 | 56.67 | Uncharacterized protein OS=Camellia sinensis var. sinensis OX=542762 GN=TEA_0222... | [more] |
A0A5N5I4V5 | 1.9e-14 | 59.45 | Extensin-3-like OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D8674_025769... | [more] |
A0A5J5B5J7 | 4.8e-13 | 55.41 | Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_027540 PE=4 SV=1 | [more] |