Lag0038339 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0038339
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionReverse transcriptase domain-containing protein
Locationchr2: 15751467 .. 15752252 (-)
RNA-Seq ExpressionLag0038339
SyntenyLag0038339
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGAATGAGAGCCTTAAAGGGCTAAGAGTGAGCCACCTCCTAGATGAAAACAATCAATGGAAGGAAAATGTTATCAGACAAGGTTTCTCCAATCCTGATGTAGAATCTATTCTCAACATGCCCACGGGATCTAAAGATGCTAAGGATGAGATAACTTGGCATCCCGACAGAAAAGGCCTCTTCACAGTGAAAAGCGCATACCACCTGACAATGGAGCTAAAGAACCAGAACTCAGCCTCCCAATCCGACCCTAGCAAGGCAACATCGTCATGGAAGAACCTTTGGGAGCTTCAAGTTCTGCCTAGAACCAAATCGTGTGTATGGAAGATCATTCAAGATATAATCCCTACAAAGGCCAACATAGCTCAAAAGGGAGTAGATACTAACCTTCTCTGCTGTATCTGTAAAAAGAAAATAGAATCTACAACTCATCTCATGTGGGATTGTAAAATCTCTAAAGAGGGGTGGCTTAGATTTATCCCGAATTCGTACCCGCTGTTTTCGGTTTGCAGGTCCAATTGGTCCCCAAAGGATTTTTGGTGGTGGTTGGAAGATAATCTCAGCAAACACATGGCGATGGGGGCAATCATTCTTTGGAAAATTTGGAATTTTCGCAACAAAGTAGCAGCCAACAGCCAAAAACCTTCAGATCGTTTCCTCTATCAAGACATTGATCAGAGCATTCAAGAATGGAAGTCTGCGTACCTGAAAGGTCAAAATCCGGAAAGAATTGGGAGCCTCTCGAGTCAAGTTCACGAGCAAAACCCAAGCCCTTCCTGCTAG

mRNA sequence

ATGGTGAATGAGAGCCTTAAAGGGCTAAGAGTGAGCCACCTCCTAGATGAAAACAATCAATGGAAGGAAAATGTTATCAGACAAGGTTTCTCCAATCCTGATGTAGAATCTATTCTCAACATGCCCACGGGATCTAAAGATGCTAAGGATGAGATAACTTGGCATCCCGACAGAAAAGGCCTCTTCACAGTGAAAAGCGCATACCACCTGACAATGGAGCTAAAGAACCAGAACTCAGCCTCCCAATCCGACCCTAGCAAGGCAACATCGTCATGGAAGAACCTTTGGGAGCTTCAAGTTCTGCCTAGAACCAAATCGTGTGTATGGAAGATCATTCAAGATATAATCCCTACAAAGGCCAACATAGCTCAAAAGGGAGTAGATACTAACCTTCTCTGCTGTATCTGTAAAAAGAAAATAGAATCTACAACTCATCTCATGTGGGATTGTAAAATCTCTAAAGAGGGGTGGCTTAGATTTATCCCGAATTCGTACCCGCTGTTTTCGGTTTGCAGGTCCAATTGGTCCCCAAAGGATTTTTGGTGGTGGTTGGAAGATAATCTCAGCAAACACATGGCGATGGGGGCAATCATTCTTTGGAAAATTTGGAATTTTCGCAACAAAGTAGCAGCCAACAGCCAAAAACCTTCAGATCGTTTCCTCTATCAAGACATTGATCAGAGCATTCAAGAATGGAAGTCTGCGTACCTGAAAGGTCAAAATCCGGAAAGAATTGGGAGCCTCTCGAGTCAAGTTCACGAGCAAAACCCAAGCCCTTCCTGCTAG

Coding sequence (CDS)

ATGGTGAATGAGAGCCTTAAAGGGCTAAGAGTGAGCCACCTCCTAGATGAAAACAATCAATGGAAGGAAAATGTTATCAGACAAGGTTTCTCCAATCCTGATGTAGAATCTATTCTCAACATGCCCACGGGATCTAAAGATGCTAAGGATGAGATAACTTGGCATCCCGACAGAAAAGGCCTCTTCACAGTGAAAAGCGCATACCACCTGACAATGGAGCTAAAGAACCAGAACTCAGCCTCCCAATCCGACCCTAGCAAGGCAACATCGTCATGGAAGAACCTTTGGGAGCTTCAAGTTCTGCCTAGAACCAAATCGTGTGTATGGAAGATCATTCAAGATATAATCCCTACAAAGGCCAACATAGCTCAAAAGGGAGTAGATACTAACCTTCTCTGCTGTATCTGTAAAAAGAAAATAGAATCTACAACTCATCTCATGTGGGATTGTAAAATCTCTAAAGAGGGGTGGCTTAGATTTATCCCGAATTCGTACCCGCTGTTTTCGGTTTGCAGGTCCAATTGGTCCCCAAAGGATTTTTGGTGGTGGTTGGAAGATAATCTCAGCAAACACATGGCGATGGGGGCAATCATTCTTTGGAAAATTTGGAATTTTCGCAACAAAGTAGCAGCCAACAGCCAAAAACCTTCAGATCGTTTCCTCTATCAAGACATTGATCAGAGCATTCAAGAATGGAAGTCTGCGTACCTGAAAGGTCAAAATCCGGAAAGAATTGGGAGCCTCTCGAGTCAAGTTCACGAGCAAAACCCAAGCCCTTCCTGCTAG

Protein sequence

MVNESLKGLRVSHLLDENNQWKENVIRQGFSNPDVESILNMPTGSKDAKDEITWHPDRKGLFTVKSAYHLTMELKNQNSASQSDPSKATSSWKNLWELQVLPRTKSCVWKIIQDIIPTKANIAQKGVDTNLLCCICKKKIESTTHLMWDCKISKEGWLRFIPNSYPLFSVCRSNWSPKDFWWWLEDNLSKHMAMGAIILWKIWNFRNKVAANSQKPSDRFLYQDIDQSIQEWKSAYLKGQNPERIGSLSSQVHEQNPSPSC
Homology
BLAST of Lag0038339 vs. NCBI nr
Match: XP_040986468.1 (uncharacterized protein LOC121234565 [Juglans microcarpa x Juglans regia])

HSP 1 Score: 136.7 bits (343), Expect = 2.8e-28
Identity = 78/241 (32.37%), Postives = 128/241 (53.11%), Query Frame = 0

Query: 7   KGLRVSHLLD-ENNQWKENVIRQGFSNPDVESILNMPTGSKDAKDEITWHPDRKGLFTVK 66
           K  +V  L+D +  +W E +IR  FS  +VE IL MP     AKD+I W P +KGLFTV+
Sbjct: 726 KDAKVEELIDRQKGEWNETMIRTIFSEEEVEQILCMPLSRGRAKDKIFWGPTKKGLFTVR 785

Query: 67  SAYHLTMELKNQNSASQSDPSKATSSWKNLWELQVLPRTKSCVWKIIQDIIPTKANIAQK 126
           SAY L MELK +N    S   K    WK++W+L++   TK  +WK    ++PTK N+ ++
Sbjct: 786 SAYFLHMELKERNKGESSTEKKVGDIWKSIWDLEIPGVTKLFLWKAANSLLPTKVNLYRR 845

Query: 127 GVDTNLLCCICKKKIESTTHLMWDCKISKEGWLRFIPNSYPLFSVCRSNWSPKDFWWWLE 186
            +  +  C +C  + ES  H++W+C  + + W     ++  +    RS  +  + W  L 
Sbjct: 846 NISMDKRCPMCDAEEESLIHILWECPAANDLWGN---DASYVKKWTRSEVNFLELWEQLR 905

Query: 187 DNLSKH-MAMGAIILWKIWNFRNKVAANSQKPSDRFLYQDIDQSIQEWKSAYLK-GQNPE 245
             LSK+ +   A++L K+W  RN+     +    R  +     ++QE++   +K  QN +
Sbjct: 906 CQLSKNQLEEVAVMLRKVWLRRNEWIFEKRLACPRNYFITTRVALQEFQEIQVKASQNRQ 963

BLAST of Lag0038339 vs. NCBI nr
Match: XP_042979975.1 (uncharacterized protein LOC122310162 [Carya illinoinensis])

HSP 1 Score: 126.7 bits (317), Expect = 2.9e-25
Identity = 69/238 (28.99%), Postives = 117/238 (49.16%), Query Frame = 0

Query: 10   RVSHLLD-ENNQWKENVIRQGFSNPDVESILNMPTGSKDAKDEITWHPDRKGLFTVKSAY 69
            +V  L+D +  +W E  IR+ F   + E IL+MP  S+  KD + W P +KGLF+VKSAY
Sbjct: 1382 KVEELIDTQKGEWDEAKIREIFVTEEAEIILSMPLSSRGTKDRLVWGPSQKGLFSVKSAY 1441

Query: 70   HLTMELKNQNSASQSDPSKATSSWKNLWELQVLPRTKSCVWKIIQDIIPTKANIAQKGVD 129
            +L +EL  +N    S   K    W  +W+L+V   TK  +W+   +++PTK N+ ++ V 
Sbjct: 1442 YLQLELWGRNQGESSVEEKRDDRWNRIWDLKVPGVTKLFIWRAANNLLPTKENLYKRKVI 1501

Query: 130  TNLLCCICKKKIESTTHLMWDCKISKEGWLRFIPNSYPLFSVCRSNWSPKDFWWWLEDNL 189
                C +C  + E+  H +W+C  +   W     +   +    R+ W+    W    D L
Sbjct: 1502 EEKRCPLCDAEEETIMHALWECPAANNLWGN---DESCVKKWARTEWNFMSLWEKFMDRL 1561

Query: 190  SK-HMAMGAIILWKIWNFRNKVAANSQKPSDRFLYQDIDQSIQEWKSAYLKGQNPERI 246
            +K  M   AI+L K+W  RN      +    +  +     ++ E++++ L     E +
Sbjct: 1562 TKDQMEEMAILLRKVWLRRNDWVFERRMACPKNSFSATKAALHEFQASQLASNQNEMV 1616

BLAST of Lag0038339 vs. NCBI nr
Match: XP_042939230.1 (uncharacterized protein LOC122274265 isoform X9 [Carya illinoinensis])

HSP 1 Score: 126.3 bits (316), Expect = 3.8e-25
Identity = 68/238 (28.57%), Postives = 117/238 (49.16%), Query Frame = 0

Query: 10   RVSHLLD-ENNQWKENVIRQGFSNPDVESILNMPTGSKDAKDEITWHPDRKGLFTVKSAY 69
            +V  L+D +  +W E  IR+ F   + E IL+MP  S+  KD + W P +KGLF+VKSAY
Sbjct: 971  KVEELIDTQKGEWDEAKIREIFVTEEAEIILSMPLSSRGTKDRLVWGPSQKGLFSVKSAY 1030

Query: 70   HLTMELKNQNSASQSDPSKATSSWKNLWELQVLPRTKSCVWKIIQDIIPTKANIAQKGVD 129
            +L +EL  +N    S   K    W  +W+L+V   TK  +W+   +++PTK N+ ++ V 
Sbjct: 1031 YLQLELWGRNQGESSVEEKRDDRWNRIWDLKVPGVTKLFIWRAANNLLPTKENLYKRKVI 1090

Query: 130  TNLLCCICKKKIESTTHLMWDCKISKEGWLRFIPNSYPLFSVCRSNWSPKDFWWWLEDNL 189
                C +C  + E+  H +W+C  +   W     +   +    R+ W+    W    D L
Sbjct: 1091 EEKRCPLCDAEEETIMHALWECPAANNLWGN---DESCVKKWARTEWNFMSLWEKFMDRL 1150

Query: 190  SK-HMAMGAIILWKIWNFRNKVAANSQKPSDRFLYQDIDQSIQEWKSAYLKGQNPERI 246
            +K  M   A++L K+W  RN      +    +  +     ++ E++++ L     E +
Sbjct: 1151 TKDQMEEMAVLLRKVWLRRNDWVFERRMACPKNSFSATKAALHEFQASQLASNQNEMV 1205

BLAST of Lag0038339 vs. NCBI nr
Match: KAG6628833.1 (hypothetical protein CIPAW_14G039600 [Carya illinoinensis])

HSP 1 Score: 125.6 bits (314), Expect = 6.5e-25
Identity = 62/230 (26.96%), Postives = 116/230 (50.43%), Query Frame = 0

Query: 10  RVSHLLD-ENNQWKENVIRQGFSNPDVESILNMPTGSKDAKDEITWHPDRKGLFTVKSAY 69
           +VS L+D  N  WK ++I + F+  D E I  +P    D +D++ W P + G F+VKSAY
Sbjct: 152 KVSLLIDVGNGYWKRDLISESFNKMDAEQICKLPISRLDVEDKMVWEPTKNGRFSVKSAY 211

Query: 70  HLTMELKNQNSASQSDPSKATSSWKNLWELQVLPRTKSCVWKIIQDIIPTKANIAQKGVD 129
            L  E   +     S   K    WK +W L V    K  +WK+ Q+++P K N+ ++ V 
Sbjct: 212 FLGKERIRRKRGEGSGKDKVEEMWKQIWNLDVQGVVKLFLWKVGQELLPIKENLHRRKVS 271

Query: 130 TNLLCCICKKKIESTTHLMWDCKISKEGWLRFIPNSYPLFSVCRSNWSPKDFWWWLEDNL 189
            + +C IC++++E+  H++W C  + + W     +  P+   C + W   + W  +   L
Sbjct: 272 ASNMCPICERRVETAVHMIWGCSAASDVWAM---DESPVRKWCNAEWGFAELWASMFQKL 331

Query: 190 S-KHMAMGAIILWKIWNFRNKVAANSQKPSDRFLYQDIDQSIQEWKSAYL 238
             + + + A  + ++W  RN +   ++  +   +++    ++ E+K A L
Sbjct: 332 RIEDVELMAYTMMRLWLRRNLLVFENKFDAPENVFKAAKLAMSEFKEANL 378

BLAST of Lag0038339 vs. NCBI nr
Match: XP_042962692.1 (uncharacterized protein LOC122296963 [Carya illinoinensis])

HSP 1 Score: 124.8 bits (312), Expect = 1.1e-24
Identity = 65/200 (32.50%), Postives = 104/200 (52.00%), Query Frame = 0

Query: 10   RVSHLLD-ENNQWKENVIRQGFSNPDVESILNMPTGSKDAKDEITWHPDRKGLFTVKSAY 69
            +V  L+D +  +W E  IR+ F   + E IL+MP  S+  KD + W P +KGLF+VKSAY
Sbjct: 1276 KVEELIDTQKGEWDEAKIREIFVTEEAEIILSMPLSSRGTKDRLVWGPSQKGLFSVKSAY 1335

Query: 70   HLTMELKNQNSASQSDPSKATSSWKNLWELQVLPRTKSCVWKIIQDIIPTKANIAQKGVD 129
            +L +EL  +N    S   K    W  +W+L+V   TK  +W+   +++PTK N+ ++ V 
Sbjct: 1336 YLQLELWGRNQGESSVEEKRDDRWNRIWDLKVPGVTKLFIWRAANNLLPTKENLYKRKVI 1395

Query: 130  TNLLCCICKKKIESTTHLMWDCKISKEGWLRFIPNSYPLFSVCRSNWSPKDFWWWLEDNL 189
                C +C  + E+  H +W+C  +   W     +   +    R+ W+    W    D L
Sbjct: 1396 EEKRCPLCDAEEETIMHALWECPAANNLWGN---DESCVKKWARTEWNFMSLWEKFMDRL 1455

Query: 190  SK-HMAMGAIILWKIWNFRN 208
            +K  M   A++L K+W  RN
Sbjct: 1456 TKDQMEEMAVLLRKVWLRRN 1472

BLAST of Lag0038339 vs. ExPASy Swiss-Prot
Match: P0C2F6 (Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1g65750 PE=3 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 1.1e-11
Identity = 50/206 (24.27%), Postives = 93/206 (45.15%), Query Frame = 0

Query: 38  ILNMPTGSKDAKDEITWHPDRKGLFTVKSAYHLTM--ELKNQNSASQSDPSKATSSWKNL 97
           +L++ TG   A+D ++W   + G F+V+SAY +    E+   N A         S +  L
Sbjct: 244 VLDLVTG---ARDRLSWKFSQDGQFSVRSAYEMLTVDEVPRPNMA---------SFFNCL 303

Query: 98  WELQVLPRTKSCVWKIIQDIIPTKANIAQKGVDTNLLCCICKKKIESTTHLMWDCKISKE 157
           W+++V  R K+ +W +    + T+    ++ +  + +C +CK  +ES  H++ DC     
Sbjct: 304 WKVRVPERVKTFLWLVGNQAVMTEEERHRRHLSASNVCQVCKGGVESMLHVLRDCPAQLG 363

Query: 158 GWLRFIPNSYPLFSVCRSNWSPKDFWWWLEDNLSKH--------MAMGAIILWKIWNFR- 217
            W+R +P         +  +  K  + WL DNL             + A+I+W  W +R 
Sbjct: 364 IWVRVVPQRR------QQGFFSKSLFEWLYDNLGDRSGCEDIPWSTIFAVIIWWGWKWRC 423

Query: 218 NKVAANSQKPSDRFLYQDIDQSIQEW 233
             +   + K  DR  +      ++EW
Sbjct: 424 GNIFGENTKCRDRVKF------VKEW 425

BLAST of Lag0038339 vs. ExPASy TrEMBL
Match: A0A803QEG9 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 8.2e-26
Identity = 71/231 (30.74%), Postives = 122/231 (52.81%), Query Frame = 0

Query: 11   VSHLLDENNQWKENVIRQGFSNPDVESILNMPTGSKDAKDEITWHPDRKGLFTVKSAYHL 70
            V++L+ +  QW   +++Q F   D+E IL +P      +D++ WH    G FTV+SAYHL
Sbjct: 1469 VANLITDERQWNIPLLQQYFCPLDIEKILTLPLSFFPTRDKLIWHHHSSGNFTVQSAYHL 1528

Query: 71   TMELKNQNSASQSDPSKATSSWKNLWELQVLPRTKSCVWKIIQDIIPTKANIAQKGVDTN 130
               L+N++ +S S  + A   WK+ W LQ+  + K   W++I D +P   ++ ++ + T+
Sbjct: 1529 ATSLENEDLSSSS--TSAVQWWKHFWSLQIPQKVKIFAWRVIHDALPVATSLVRRKIITD 1588

Query: 131  LLCCICKKKIESTTHLMWDCKISKEGWLRFIPNSYPLFSVCRSNWSPKDFWWWLEDNLSK 190
              C ICK+  EST H ++ CK +K  W  F  N     ++   N    D+  +L    +K
Sbjct: 1589 STCSICKQAWESTGHALFGCKYAKAVWRSFHFNFNWSAAISMKN---GDYLMYLSSIYNK 1648

Query: 191  -HMAMGAIILWKIWNFRNKV--AANSQKPSDRFLYQDIDQSIQEWKSAYLK 239
              M     I+W IW  RNKV    N+++ +D  ++  +   +Q +++A  K
Sbjct: 1649 AEMEELFCIMWAIWGERNKVVHGKNARRANDLAVFATV--FLQNFRAAQHK 1692

BLAST of Lag0038339 vs. ExPASy TrEMBL
Match: A0A2N9FC29 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS12323 PE=4 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 9.1e-25
Identity = 69/238 (28.99%), Postives = 129/238 (54.20%), Query Frame = 0

Query: 11   VSHLLDEN-NQWKENVIRQGFSNPDVESILNMPTGSKDAKDEITWHPDRKGLFTVKSAYH 70
            V  L+D+N  +WK N++++ F   D+E I  +P  S++ +D++ W     G F+VKSAYH
Sbjct: 1352 VDSLIDDNLMRWKVNLLKEIFLPRDLEVIKQIPLSSRNPRDKLIWTGTTNGRFSVKSAYH 1411

Query: 71   LTM-ELKNQNSASQSDPSKATSSWKNLWELQVLPRTKSCVWKIIQDIIPTKANIAQKGVD 130
            L + E  + + +S S  S     W N+W  QV P+ +  +W+   DI+PT+  +  KG+ 
Sbjct: 1412 LLLGEANSSSGSSSSGGSLDRHLWSNIWSSQVQPKIRLFMWRACLDILPTRTKLFDKGIL 1471

Query: 131  TNLLCCICKKKIESTTHLMWDCKISKEGWLRFIPNSYPLFSVCRSNWSPKDFWWWLEDNL 190
             +  C  C+   E+++H++W C  +++ W +  P   P+ S C  N S +DF     D L
Sbjct: 1472 HSFSCQWCETDPETSSHVLWQCAFAQKVW-KACP--VPIPSSCNENLSFRDFIVHCIDAL 1531

Query: 191  S-KHMAMGAIILWKIWNFRNKVAANSQKPSDRFLYQDIDQSIQEWKSAYLKGQNPERI 246
                +A+     W+IWN RN++  +++  +   +++     + ++ +  L+ Q PE++
Sbjct: 1532 EVTQIAVLFTTAWEIWNARNRLNWDNKLTTVDDIWRKAAGMVSDFLAVNLRVQVPEKV 1586

BLAST of Lag0038339 vs. ExPASy TrEMBL
Match: A0A803PEK8 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 1.6e-24
Identity = 73/221 (33.03%), Postives = 108/221 (48.87%), Query Frame = 0

Query: 7    KGLRVSHLLDENNQWKENVIRQGFSNPDVESILNMPTGSKDAKDEITWHPDRKGLFTVKS 66
            + L V+ L   + +W EN +R  F+  D E IL+ P+   D +D+I WH  + G +TVKS
Sbjct: 1208 ENLYVADLKHGDGRWDENFVRSVFNMEDAELILSTPSTGWDLEDKIMWHYSKNGEYTVKS 1267

Query: 67   AYHLTMELKNQNSASQSDPSKATSSWKNLWELQVLPRTKSCVWKIIQDIIPTKANIAQKG 126
             Y +   L  +    QSD       WK LW L++ P+ K  VWK+  + IPT AN+A++G
Sbjct: 1268 GYKMASSLATEQ--YQSDDQLYVDWWKTLWHLKIPPKIKHFVWKLAYNWIPTSANLAKRG 1327

Query: 127  VDTNLLCCICK-KKIESTTHLMWDCKISKEGW--------LRFIPNSYPLFSVCRSN--W 186
            V  + +C  C    +E+T H +W+CK SKE W        ++ I     L  + R    W
Sbjct: 1328 VALDNICERCSGHVVETTAHALWECKRSKELWAVSGLKDDMKQIKGEDLLSFLMRMARLW 1387

Query: 187  SPKDFWWWLEDNLSKHMAMGAIILWKIWNFRNKVAANSQKP 217
                F ++L            +I W IWN RN V    + P
Sbjct: 1388 DKTRFEFFL------------VITWNIWNVRNNVVHGGKAP 1414

BLAST of Lag0038339 vs. ExPASy TrEMBL
Match: A0A2N9GI95 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS27032 PE=4 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 2.7e-24
Identity = 63/211 (29.86%), Postives = 114/211 (54.03%), Query Frame = 0

Query: 11   VSHLLD-ENNQWKENVIRQGFSNPDVESILNMPTGSKDAKDEITWHPDRKGLFTVKSAYH 70
            V+HL+D ++  WKE +IR+ F   D  +I+ +P  S    D + W   R G + V+S YH
Sbjct: 933  VAHLIDHQSRTWKEELIRETFLPHDAGAIMGIPLSSHPQSDCLVWGGTRNGRYAVRSGYH 992

Query: 71   LTMELKNQNSASQSDPSKATSSWKNLWELQVLPRTKSCVWKIIQDIIPTKANIAQKGVDT 130
            L ++ K Q      D ++ T+ W ++W LQV P+T+ C+W+   + +PT+ N+  + +  
Sbjct: 993  LLIQEKAQADPGPFDTTEMTNLWHSIWSLQVPPKTRHCLWRACHESLPTRRNLHHRHIID 1052

Query: 131  NLLCCICKKKIESTTHLMWDCKISKEGWLRFIPNSYPLFSVCRSNWSPKDFWWWLEDNLS 190
            +  C  C  ++E+T H +W+CK  +  W + +P    L  V  +++   D W      LS
Sbjct: 1053 DPTCENCSNQVETTLHALWNCKTIQVVW-QTLPWGRRLQGVTYADF--MDLWHRCTQLLS 1112

Query: 191  -KHMAMGAIILWKIWNFRNKVAANSQKPSDR 220
               + + +++ W IW  RN+V  +  +P+D+
Sbjct: 1113 TTELQLFSMVTWLIWYHRNRVRLH--QPTDQ 1138

BLAST of Lag0038339 vs. ExPASy TrEMBL
Match: A0A6P9ERU0 (uncharacterized protein LOC118349853 OS=Juglans regia OX=51240 GN=LOC118349853 PE=4 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 2.7e-24
Identity = 54/149 (36.24%), Postives = 92/149 (61.74%), Query Frame = 0

Query: 10  RVSHLLDEN-NQWKENVIRQGFSNPDVESILNMPTGSKDAKDEITWHPDRKGLFTVKSAY 69
           RV  LLD++ + W EN++R+ F   + E I ++P     ++D++ W P ++GLFTVKSAY
Sbjct: 591 RVCELLDQSGSSWNENLVREIFLKEEAEQICSLPVSKLGSEDKLIWGPSKRGLFTVKSAY 650

Query: 70  HLTMELKNQNSASQSDPSKATSSWKNLWELQVLPRTKSCVWKIIQDIIPTKANIAQKGVD 129
           +L  E K++     S   KA S WKN+W L+V    K+ +WK+  D++ T+ N+ ++ V 
Sbjct: 651 YLEQERKSRLKGECSTEKKADSIWKNIWSLRVPGVVKTFLWKVGNDVLATRKNLWRRRVI 710

Query: 130 TNLLCCICKKKIESTTHLMWDCKISKEGW 158
            +  C ICK++ E+  H++W C  +++ W
Sbjct: 711 ESATCPICKREGETAMHILWQCPAARDVW 739

BLAST of Lag0038339 vs. TAIR 10
Match: AT4G29090.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 85.1 bits (209), Expect = 9.0e-17
Identity = 55/233 (23.61%), Postives = 111/233 (47.64%), Query Frame = 0

Query: 9   LRVSHLLDEN-NQWKENVIRQGFSNPDVESILNMPTGSKDAKDEITWHPDRKGLFTVKSA 68
           L+VS L+DE+  +W+++VI   F   + + I  +  G +   D  TW     G +TVKS 
Sbjct: 169 LKVSDLIDESGREWRKDVIEMLFPEVERKLIGELRPGGRRILDSYTWDYTSSGDYTVKSG 228

Query: 69  YHLTMELKNQNSASQ--SDPSKATSSWKNLWELQVLPRTKSCVWKIIQDIIPTKANIAQK 128
           Y +  ++ N+ S+ Q  S+PS     ++ +W+ Q  P+ +  +WK + + +P    +A +
Sbjct: 229 YWVLTQIINKRSSPQEVSEPS-LNPIYQKIWKSQTSPKIQHFLWKCLSNSLPVAGALAYR 288

Query: 129 GVDTNLLCCICKKKIESTTHLMWDCKISKEGW-LRFIPNSYPLFSVCRSNWSPKDFWWWL 188
            +     C  C    E+  HL++ C  ++  W +  IP   PL      +     +W + 
Sbjct: 289 HLSKESACIRCPSCKETVNHLLFKCTFARLTWAISSIP--IPLGGEWADSIYVNLYWVFN 348

Query: 189 EDN----LSKHMAMGAIILWKIWNFRNKVAANSQKPSDRFLYQDIDQSIQEWK 234
             N      K   +   +LW++W  RN++    ++ + + + +  +  ++EW+
Sbjct: 349 LGNGNPQWEKASQLVPWLLWRLWKNRNELVFRGREFNAQEVLRRAEDDLEEWR 398

BLAST of Lag0038339 vs. TAIR 10
Match: AT1G60720.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )

HSP 1 Score: 51.2 bits (121), Expect = 1.4e-06
Identity = 32/143 (22.38%), Postives = 65/143 (45.45%), Query Frame = 0

Query: 93  KNLWELQVLPRTKSCVWKIIQDIIPTKANIAQKGVDTNLLCCICKKKIESTTHLMWDCKI 152
           K +W    +P+    +W    D +PT+  +A  G   +  CC+C  + ES  HL++ C+ 
Sbjct: 129 KAVWFKGAVPKHAFNMWISQLDRLPTRQRLASWGHIQSFDCCLCTIETESRDHLLFSCEF 188

Query: 153 SKEGWLRFIPNSYPLFSVCRSNWSPKDFWWWLEDNLSKHMAM-----GAIILWKIWNFRN 212
           + + W        P   +  S W+  +   W+  + S   ++        I++ IW  RN
Sbjct: 189 AAQVWRLAFSRLCPRQRLFCS-WA--ELLSWMRSSSSSAPSLLRKVSAHAIIYNIWRQRN 248

Query: 213 KVAANSQKPSDRFLYQDIDQSIQ 231
            V  N+ + +   +++ +D+ I+
Sbjct: 249 NVLHNNLRIAPIIIFKIVDREIR 268

BLAST of Lag0038339 vs. TAIR 10
Match: AT4G10613.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )

HSP 1 Score: 48.9 bits (115), Expect = 7.2e-06
Identity = 31/125 (24.80%), Postives = 52/125 (41.60%), Query Frame = 0

Query: 108 VWKIIQDIIPTKANIAQKGVDTNLLCCICKKKIESTTHLMWDCKISKEGWLRFIPNSYPL 167
           +W    D +PT+A +   G+  + LCC+C + +E+  HL+  C  S   W   +     L
Sbjct: 1   MWISNLDRLPTRARLVSWGLQISPLCCLCSQSVETRDHLILTCGFSSSIW-NMVQARLRL 60

Query: 168 FSVCRSNWSPKDFWWWLEDNLSKHM---AMGAIILWKIWNFRNKVAANSQKPSDRFLYQD 227
             V    W     W  L    S  +    +    +  IW  RN +  N Q      ++++
Sbjct: 61  QPVQFRVWESLLSWIKLSTASSPSIIRKLVAQATVCAIWKQRNNLLHNLQDILPSIIFKN 120

Query: 228 IDQSI 230
           ID+ I
Sbjct: 121 IDREI 124

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_040986468.12.8e-2832.37uncharacterized protein LOC121234565 [Juglans microcarpa x Juglans regia][more]
XP_042979975.12.9e-2528.99uncharacterized protein LOC122310162 [Carya illinoinensis][more]
XP_042939230.13.8e-2528.57uncharacterized protein LOC122274265 isoform X9 [Carya illinoinensis][more]
KAG6628833.16.5e-2526.96hypothetical protein CIPAW_14G039600 [Carya illinoinensis][more]
XP_042962692.11.1e-2432.50uncharacterized protein LOC122296963 [Carya illinoinensis][more]
Match NameE-valueIdentityDescription
P0C2F61.1e-1124.27Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1... [more]
Match NameE-valueIdentityDescription
A0A803QEG98.2e-2630.74Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
A0A2N9FC299.1e-2528.99Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=F... [more]
A0A803PEK81.6e-2433.03Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
A0A2N9GI952.7e-2429.86Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=F... [more]
A0A6P9ERU02.7e-2436.24uncharacterized protein LOC118349853 OS=Juglans regia OX=51240 GN=LOC118349853 P... [more]
Match NameE-valueIdentityDescription
AT4G29090.19.0e-1723.61Ribonuclease H-like superfamily protein [more]
AT1G60720.11.4e-0622.38RNA-directed DNA polymerase (reverse transcriptase)-related family protein [more]
AT4G10613.17.2e-0624.80RNA-directed DNA polymerase (reverse transcriptase)-related family protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR026960Reverse transcriptase zinc-binding domainPFAMPF13966zf-RVTcoord: 62..157
e-value: 4.9E-16
score: 59.2
NoneNo IPR availablePANTHERPTHR46736FAMILY NOT NAMEDcoord: 23..210
NoneNo IPR availablePANTHERPTHR46736:SF6SUBFAMILY NOT NAMEDcoord: 23..210

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0038339.1Lag0038339.1mRNA