Lag0038316 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0038316
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Unknown protein
Location	chr2: 15159235 .. 15159747 (+)
RNA-Seq Expression	Lag0038316
Synteny	Lag0038316

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAGATGGCCATTCTTCCAACCAAACCATATTTGAACGAGAAGAGAAAGCTAATTTGGCCAGCCCATGCGCAGTTGTATTACCAGAGCGAGGAGTAAAGCTAAAAGAGCAAGAAGCATGCAAAATGGAGCCTCGCAAGGCTGCCGCAAAAACGCCCAACTCCGACAGATCTTCTGTCACCGACGATAACAAACGAAATAGACGCAAAGAGTCGGTTTCAAGAATCCACGGAAAGAAACCCAAATCACGAGCCAAAAGAAGTCCCTCTCTAATCGCAGACCCCGAAATCCACGGACGGAAGATTCCCAAAGAAAGCAGTCGCAGCGAGGAAGACGACGCCCCGTTCGTCACGGATAATAACCCCACCGGCAGCAAGATTTTCCCCCGCCAAGAAACTCGCATCCACATTTATTTTAAAATAACCAGGCCGAGGGGGAGACCACGAAGCCGGCGATTCCATGCAACTGATTTGTATGGGCCTCATCGGGATGGAAAACGCTATGAATCTTGA

mRNA sequence

ATGGCAGATGGCCATTCTTCCAACCAAACCATATTTGAACGAGAAGAGAAAGCTAATTTGGCCAGCCCATGCGCAGTTGTATTACCAGAGCGAGGAGTAAAGCTAAAAGAGCAAGAAGCATGCAAAATGGAGCCTCGCAAGGCTGCCGCAAAAACGCCCAACTCCGACAGATCTTCTGTCACCGACGATAACAAACGAAATAGACGCAAAGAGTCGGTTTCAAGAATCCACGGAAAGAAACCCAAATCACGAGCCAAAAGAAGTCCCTCTCTAATCGCAGACCCCGAAATCCACGGACGGAAGATTCCCAAAGAAAGCAGTCGCAGCGAGGAAGACGACGCCCCGTTCGTCACGGATAATAACCCCACCGGCAGCAAGATTTTCCCCCGCCAAGAAACTCGCATCCACATTTATTTTAAAATAACCAGGCCGAGGGGGAGACCACGAAGCCGGCGATTCCATGCAACTGATTTGTATGGGCCTCATCGGGATGGAAAACGCTATGAATCTTGA

Coding sequence (CDS)

ATGGCAGATGGCCATTCTTCCAACCAAACCATATTTGAACGAGAAGAGAAAGCTAATTTGGCCAGCCCATGCGCAGTTGTATTACCAGAGCGAGGAGTAAAGCTAAAAGAGCAAGAAGCATGCAAAATGGAGCCTCGCAAGGCTGCCGCAAAAACGCCCAACTCCGACAGATCTTCTGTCACCGACGATAACAAACGAAATAGACGCAAAGAGTCGGTTTCAAGAATCCACGGAAAGAAACCCAAATCACGAGCCAAAAGAAGTCCCTCTCTAATCGCAGACCCCGAAATCCACGGACGGAAGATTCCCAAAGAAAGCAGTCGCAGCGAGGAAGACGACGCCCCGTTCGTCACGGATAATAACCCCACCGGCAGCAAGATTTTCCCCCGCCAAGAAACTCGCATCCACATTTATTTTAAAATAACCAGGCCGAGGGGGAGACCACGAAGCCGGCGATTCCATGCAACTGATTTGTATGGGCCTCATCGGGATGGAAAACGCTATGAATCTTGA

Protein sequence

MADGHSSNQTIFEREEKANLASPCAVVLPERGVKLKEQEACKMEPRKAAAKTPNSDRSSVTDDNKRNRRKESVSRIHGKKPKSRAKRSPSLIADPEIHGRKIPKESSRSEEDDAPFVTDNNPTGSKIFPRQETRIHIYFKITRPRGRPRSRRFHATDLYGPHRDGKRYES

Homology

The following BLAST results are available for this feature:

BLAST of Lag0038316 vs.


Match Name	E-value	Identity	Description

BLAST of Lag0038316 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 151..170
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 37..129
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..22
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 143..170
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 71..86
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 87..115
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 37..51

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0038316.1	Lag0038316.1	mRNA