Lag0038296 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTATGTTCCCAGCCCCCACTCGGTCTTGCCCCTGAAATGGTAGGCTTATTGGGTCGGCAAACTGGTCACTCTCACCCATAAAAATCTAAGGACAATCCGTCCTGAAAAGGGATTCATAACATACTCAGGATTTAGATTGAGTTACATAGGTCATCATATTGAAATAGAAACCTAAACTAGTTAACGGTGTTACATCTAGTGGTTACTATTTCGCGGTCAGATCTTATGCAAACTCATTGCACAAGATACCCCTACTCGCATGTCTCCTACATGGATGCTTTGGATCATTGCATCTGTATCGAATACAAAGTGGGACGTATCTCATAGTGTCACCAGGATAAGGTACCCAGCCTTATCCCTATACTATAGACCATTTAGGTTGTTAATTACTTGAACACTGATCTCCATATGTCCCCACATACTAGTCCAAGTCTCATCTAAACAACCTAGGATCGTAGTTTATTGGATTTGGGTCAAATTATGTAATTTCAAAAACAATAACTCTTTATTGTAAAGAGAATTTGCGGTGGGTGACAAATAAGATTTCTATAATTGCAAATATAGCACAATATAAAAAGAATGACAAATATGACACAATCTATCAGAGTATATCACTGATAGACTCTAATAAATTAGAATCTATCAATCTTTACTGATAGACTTTGATTCATTTAATATATTATTTTATTTTAAAAATTAATAAAAAAAGTATATATTTTTTAATAAAAACTAATGTCACGTGAGCCATTTGTTAGTATTTGACAGAAAATTTGACGGAGGGACTAAAAACGTAACGAAAACCAAATCTCAGGGGCTAAATTGTTGAGTTTGAAAACTCAATGACCAAAATGAAACCTAATCCAAACCTCAGGGACCAAAAATGTATTTTTCCTAATTTAAAAGTTGATTCATAAATTGGACTCCAGTCTTTTAGGCCCCGTTTGATAACCATTTCGTTTTTTGTTTTTTGTTTTTGAAAATTAAACCTAAAAACACTATTTTTACCCACAAGCTTCTTTGTTTTTTATCTACCTCCTTTTCCATGTTTTCAAAAACCAAGCCAAATTTTGAAAACAAAAAAAAAAAGTAGTTTTCAAAAACTTGTTTGTGTTTTTGGAATTTGGCTAGGAACTCGAATGTCTCATTAACAAAAAAGAAAACTAAGAAGATTGAGAGAAAACAAGCACAAATTTCAAAAACCAAAAACTAAAAACGAAATGGTTATCAAACGGACCTTAATGAATTATGAATTTCTATCTTAGTCTTTTAACAACCGTCCATTTTACACTTAATTTAATTATTGTTTTTTTTCTCAATTAATAAGTCGTTGATATTTAAATTTATATAATGGCATGTCAACCAAAACATAGCTCCAATTAAGACCTATGTCATAAAAATTAAAAAAATTAAAAAAAAAATTAAAGGTTGATATCCACACACTCCTGAAGTACTAAGAAAACAAAATAGAGAATTTCAAAAAAAAAAAAAAAAAAATAGAAAACAAAATAGAGACGTGTAAATTCTCTAAAAACTAGAGGCCACTTTATAGAAACCGTAAATTAAAAATATGCTCCAAACTTTCTTCTTCTTGTTTATTGAGAAATCCAAAATGTCATTGCCATTTCCTTGTCATAAAATAAATAAACAACGAAACGAGTTAGAGATGAGAATTTAAACGTCAATATATATTTAGATGAGGTCTTTTAATATATATATATATATATTTTTTTTTTTTATCGTTTTTTCCAAAGCAATAACTTTTTTAACCTACCCTTAACCCATTTATGAAAACAAGGAAGAATATTCTTCCATCATTGCATTCTATCAAAACTTTGAACTTGGAATTTTTTCAAAAAAAAACTTTAAACTTGAAAGAGAAGCAAACCCTATTTTCCCCTCTATATATATACAATTTATATATCCTCCATTCTTATCCAAGTTTTTCATCTTCACATTTCAACTCATTTTCTCTCCCTATTTTCTCCTCCTCCCTATGGATGTAGAAATGGAAAATTTGCAGTTTCTTGGGATCTATGGAATTCTTCAAGAAACCATCAAATTGTTACACAAATGGAGAAAAAATTTCACTCAAATCACAATTGCTTTCATTCTTCCTCTTGCTCTCTTATACTTGGCCAACATGGAAATATCCAATTTCTTCATTGAAAAAATTACCCAAAACATACTAATTTCACAACAAACACAAAATCCACACCCGAAATCCCAGAACTATCCCATGATGATGTTGTACCTTTAGCAACAATTTCTTATGTTCTCTTAAACTTGGCTTACTTCATCTTTTCCGCCATTTTTTCCCTCGTCGCCACCTCCACCGTCGTCTACACCGTCGCCTGTATCTACACGACACGTGACGTTTCTTTCAAGCACGTGATCAAAATCATCCCCAAGGTCTGGAAGCGGCTTCTCATCACCTCTCTGTGTTACTTGGTAGCGCTTTTTTTCTTCAACTTTGTTGCTTTCTTTCTGCTCCTTTTGACACTATCAATCGCGGCGCTAATTTATGGCCAAAATGCCCTTACCTTCAACAATAATAACGGCATGACTGGAATGATTCTCTTGTTCTTCATCATCTTCTATTGTTTGGCTGGTTTGTATTTGACGATAATTTGGCAACTGTCGAGTGTCGTGTCGGTCTTGGAAGAGTCGTGTGGGTTCGAAGCCATGGCCAAAAGCAAGGCGTTGCTTAAGGGGAAGATTTGGATGGTTACGAAGCTGTCGATGTTGCTAAGTTTGCCATTTGGAGTCGTTCATCTTTTGTCTTTTGTTCTTGCTTTTCGGTTGGCGTCGGCGGGGGCTGTTGGCAGGGGCATTTCGGGGATTATTTCGGTCTTGCAATTTTTGATCTTCTATTTGGTTAAGCTTGTGGTGGAGACTGTGGTGTATTTTGTTTGTAAATCGTACCACAGTGAGAGTATCGACAAGTTGGCTTTCTCAAACCCTGTTCGAGGTTACCTATTGGCAGACTATGATCCCTCCAAGGGTGAGAAATTGCAAGTTGTTTGA ATGTTATGTTCCCAGCCCCCACTCGGTCTTGCCCCTGAAATGATCTTATGCAAACTCATTGCACAAGATACCCCTACTCGCATGTCTCCTACATGGATGCTTTGGATCATTGCATCTGTATCGAATACAAAGTGGGACGTATCTCATAGTGTCACCAGGATAAGTTTCTTGGGATCTATGGAATTCTTCAAGAAACCATCAAATTCAACAATTTCTTATGTTCTCTTAAACTTGGCTTACTTCATCTTTTCCGCCATTTTTTCCCTCGTCGCCACCTCCACCGTCGTCTACACCGTCGCCTGTATCTACACGACACGTGACGTTTCTTTCAAGCACGTGATCAAAATCATCCCCAAGGTCTGGAAGCGGCTTCTCATCACCTCTCTGTGTTACTTGGTAGCGCTTTTTTTCTTCAACTTTGTTGCTTTCTTTCTGCTCCTTTTGACACTATCAATCGCGGCGCTAATTTATGGCCAAAATGCCCTTACCTTCAACAATAATAACGGCATGACTGGAATGATTCTCTTGTTCTTCATCATCTTCTATTGTTTGGCTGGTTTGTATTTGACGATAATTTGGCAACTGTCGAGTGTCGTGTCGGTCTTGGAAGAGTCGTGTGGGTTCGAAGCCATGGCCAAAAGCAAGGCGTTGCTTAAGGGGAAGATTTGGATGGTTACGAAGCTGTCGATGTTGCTAAGTTTGCCATTTGGAGTCGTTCATCTTTTGTCTTTTGTTCTTGCTTTTCGGTTGGCGTCGGCGGGGGCTGTTGGCAGGGGCATTTCGGGGATTATTTCGGTCTTGCAATTTTTGATCTTCTATTTGGTTAAGCTTGTGGTGGAGACTGTGGTGTATTTTGTTTGTAAATCGTACCACAGTGAGAGTATCGACAAGTTGGCTTTCTCAAACCCTGTTCGAGGTTACCTATTGGCAGACTATGATCCCTCCAAGGGTGAGAAATTGCAAGTTGTTTGA ATGTTATGTTCCCAGCCCCCACTCGGTCTTGCCCCTGAAATGATCTTATGCAAACTCATTGCACAAGATACCCCTACTCGCATGTCTCCTACATGGATGCTTTGGATCATTGCATCTGTATCGAATACAAAGTGGGACGTATCTCATAGTGTCACCAGGATAAGTTTCTTGGGATCTATGGAATTCTTCAAGAAACCATCAAATTCAACAATTTCTTATGTTCTCTTAAACTTGGCTTACTTCATCTTTTCCGCCATTTTTTCCCTCGTCGCCACCTCCACCGTCGTCTACACCGTCGCCTGTATCTACACGACACGTGACGTTTCTTTCAAGCACGTGATCAAAATCATCCCCAAGGTCTGGAAGCGGCTTCTCATCACCTCTCTGTGTTACTTGGTAGCGCTTTTTTTCTTCAACTTTGTTGCTTTCTTTCTGCTCCTTTTGACACTATCAATCGCGGCGCTAATTTATGGCCAAAATGCCCTTACCTTCAACAATAATAACGGCATGACTGGAATGATTCTCTTGTTCTTCATCATCTTCTATTGTTTGGCTGGTTTGTATTTGACGATAATTTGGCAACTGTCGAGTGTCGTGTCGGTCTTGGAAGAGTCGTGTGGGTTCGAAGCCATGGCCAAAAGCAAGGCGTTGCTTAAGGGGAAGATTTGGATGGTTACGAAGCTGTCGATGTTGCTAAGTTTGCCATTTGGAGTCGTTCATCTTTTGTCTTTTGTTCTTGCTTTTCGGTTGGCGTCGGCGGGGGCTGTTGGCAGGGGCATTTCGGGGATTATTTCGGTCTTGCAATTTTTGATCTTCTATTTGGTTAAGCTTGTGGTGGAGACTGTGGTGTATTTTGTTTGTAAATCGTACCACAGTGAGAGTATCGACAAGTTGGCTTTCTCAAACCCTGTTCGAGGTTACCTATTGGCAGACTATGATCCCTCCAAGGGTGAGAAATTGCAAGTTGTTTGA MLCSQPPLGLAPEMILCKLIAQDTPTRMSPTWMLWIIASVSNTKWDVSHSVTRISFLGSMEFFKKPSNSTISYVLLNLAYFIFSAIFSLVATSTVVYTVACIYTTRDVSFKHVIKIIPKVWKRLLITSLCYLVALFFFNFVAFFLLLLTLSIAALIYGQNALTFNNNNGMTGMILLFFIIFYCLAGLYLTIIWQLSSVVSVLEESCGFEAMAKSKALLKGKIWMVTKLSMLLSLPFGVVHLLSFVLAFRLASAGAVGRGISGIISVLQFLIFYLVKLVVETVVYFVCKSYHSESIDKLAFSNPVRGYLLADYDPSKGEKLQVV Homology
BLAST of Lag0038296 vs. NCBI nr
Match: XP_023536183.1 (uncharacterized protein LOC111797428 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 240.7 bits (613), Expect = 1.7e-59 Identity = 145/246 (58.94%), Postives = 173/246 (70.33%), Query Frame = 0
BLAST of Lag0038296 vs. NCBI nr
Match: KAG6592156.1 (hypothetical protein SDJN03_14502, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 240.0 bits (611), Expect = 2.9e-59 Identity = 145/246 (58.94%), Postives = 173/246 (70.33%), Query Frame = 0
BLAST of Lag0038296 vs. NCBI nr
Match: XP_022936200.1 (uncharacterized protein LOC111442875 [Cucurbita moschata]) HSP 1 Score: 239.6 bits (610), Expect = 3.8e-59 Identity = 145/246 (58.94%), Postives = 173/246 (70.33%), Query Frame = 0
BLAST of Lag0038296 vs. NCBI nr
Match: KAG7025019.1 (hypothetical protein SDJN02_13841, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 238.4 bits (607), Expect = 8.5e-59 Identity = 144/246 (58.54%), Postives = 173/246 (70.33%), Query Frame = 0
BLAST of Lag0038296 vs. NCBI nr
Match: XP_022153697.1 (uncharacterized protein LOC111021150 [Momordica charantia]) HSP 1 Score: 224.6 bits (571), Expect = 1.3e-54 Identity = 138/264 (52.27%), Postives = 183/264 (69.32%), Query Frame = 0
BLAST of Lag0038296 vs. ExPASy TrEMBL
Match: A0A6J1FCY9 (uncharacterized protein LOC111442875 OS=Cucurbita moschata OX=3662 GN=LOC111442875 PE=4 SV=1) HSP 1 Score: 239.6 bits (610), Expect = 1.8e-59 Identity = 145/246 (58.94%), Postives = 173/246 (70.33%), Query Frame = 0
BLAST of Lag0038296 vs. ExPASy TrEMBL
Match: A0A6J1DJN3 (uncharacterized protein LOC111021150 OS=Momordica charantia OX=3673 GN=LOC111021150 PE=4 SV=1) HSP 1 Score: 224.6 bits (571), Expect = 6.1e-55 Identity = 138/264 (52.27%), Postives = 183/264 (69.32%), Query Frame = 0
BLAST of Lag0038296 vs. ExPASy TrEMBL
Match: A0A6J1DI62 (uncharacterized protein LOC111021151 OS=Momordica charantia OX=3673 GN=LOC111021151 PE=4 SV=1) HSP 1 Score: 214.9 bits (546), Expect = 4.9e-52 Identity = 139/264 (52.65%), Postives = 173/264 (65.53%), Query Frame = 0
BLAST of Lag0038296 vs. ExPASy TrEMBL
Match: A0A0A0KFW2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G398210 PE=4 SV=1) HSP 1 Score: 206.5 bits (524), Expect = 1.7e-49 Identity = 131/253 (51.78%), Postives = 168/253 (66.40%), Query Frame = 0
BLAST of Lag0038296 vs. ExPASy TrEMBL
Match: A0A5A7V1U2 (Putative transmembrane protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold184G00470 PE=4 SV=1) HSP 1 Score: 203.8 bits (517), Expect = 1.1e-48 Identity = 135/259 (52.12%), Postives = 173/259 (66.80%), Query Frame = 0
BLAST of Lag0038296 vs. TAIR 10
Match: AT1G31130.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G19950.1); Has 246 Blast hits to 244 proteins in 29 species: Archae - 2; Bacteria - 16; Metazoa - 0; Fungi - 0; Plants - 222; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). ) HSP 1 Score: 105.9 bits (263), Expect = 6.1e-23 Identity = 88/244 (36.07%), Postives = 133/244 (54.51%), Query Frame = 0
BLAST of Lag0038296 vs. TAIR 10
Match: AT4G19950.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G44860.1); Has 338 Blast hits to 330 proteins in 72 species: Archae - 2; Bacteria - 94; Metazoa - 7; Fungi - 0; Plants - 232; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). ) HSP 1 Score: 100.1 bits (248), Expect = 3.4e-21 Identity = 88/276 (31.88%), Postives = 141/276 (51.09%), Query Frame = 0
BLAST of Lag0038296 vs. TAIR 10
Match: AT5G44860.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G19950.1); Has 233 Blast hits to 227 proteins in 25 species: Archae - 0; Bacteria - 13; Metazoa - 1; Fungi - 0; Plants - 216; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). ) HSP 1 Score: 88.6 bits (218), Expect = 1.0e-17 Identity = 87/244 (35.66%), Postives = 127/244 (52.05%), Query Frame = 0
BLAST of Lag0038296 vs. TAIR 10
Match: AT2G18690.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF975 (InterPro:IPR010380); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G18680.1); Has 213 Blast hits to 211 proteins in 20 species: Archae - 0; Bacteria - 8; Metazoa - 0; Fungi - 0; Plants - 205; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 53.5 bits (127), Expect = 3.6e-07 Identity = 73/229 (31.88%), Postives = 115/229 (50.22%), Query Frame = 0
BLAST of Lag0038296 vs. TAIR 10
Match: AT2G18690.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF975 (InterPro:IPR010380); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G18680.1); Has 186 Blast hits to 184 proteins in 18 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 182; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 53.5 bits (127), Expect = 3.6e-07 Identity = 73/229 (31.88%), Postives = 115/229 (50.22%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
|