Lag0038290 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTCGAGGTTTGGGGTCACCTCTGGCATTCCGACGTTTGCACAAACTTGTGCATGCTCAAAAACCCCCACGTGGTGTTTTTATCTGAAACGAAGCTCCAACAACGTGAAATGGATTTTGTGCATCATCAGTTGTGCTTCCAGAATTGTTTTACGGTTAATAGTGTTGGTCGTAGGGGTGGCCTTGCTTTGTTATGGGATTCCTCAGTGGGTTTTAGCCTTCTATCTTTTTCCACGCACCATATCAACGGATGGATTGATTGGAATGGTTTGGCTTGGCAACTGACGGGTTTTTACGGGTTTCCAGATCGGGATGCGCACCATCTTTCTTGGAGTCTTCTTCGGCAGCTACATGGTGATCCAAATACTCCTTGGCTTGTCAGTGGAGATTTCAATGCTATCTTAAATCACTCTCAAAAGGATGGTGGTCGACTAACATTTGAGGGAGAGATTGATGCTTTCCAACAAGTACTTGATGAGTGCTCTCTAATGGATCTGGGGTTTGTGGGTGAACTGTTTACGTGGAAAAATCGTCGAGCGGGTAGGGAAACCATATGTGAATGCTTAGATAGAGTTGTGTGTACTTCGGCTTGGCATCAACTCATAATTTTGTGTCTAGGTCAAAAATTTCCCAAGTGGTTTCTCCAAAAACGACTGCAAAACGATGTATTTATAGAAACATTTGAGGTAGTGTCTAGATGTTGTCCGTAACATCTTGACACCACCGACGAAATGAAAATAGGTTTGCAGGGTGAATTTCAAACCGTTGAGACACTTGGTAGTATCACCTCGATGCTACTACTGTGATACTTTTGGCTTGATAGAATGCAGTATTGCGACATCGTCTCCTTAACTCTCCTGGCTTCAAATTCTCTTATGAAACCTTGA ATGTTCGAGGTTTGGGGTCACCTCTGGCATTCCGACGTTTGCACAAACTTGTGCATGCTCAAAAACCCCCACGTGGTGTTTTTATCTGAAACGAAGCTCCAACAACGTGAAATGGATTTTGTGCATCATCAGTTGTGCTTCCAGAATTGTTTTACGGTTAATAGTGTTGGTCGTAGGGGTGGCCTTGCTTTGTTATGGGATTCCTCAGTGGGTTTTAGCCTTCTATCTTTTTCCACGCACCATATCAACGGATGGATTGATTGGAATGGTTTGGCTTGGCAACTGACGGGTTTTTACGGGTTTCCAGATCGGGATGCGCACCATCTTTCTTGGAGTCTTCTTCGGCAGCTACATGGTGATCCAAATACTCCTTGGCTTGTCAGTGGAGATTTCAATGCTATCTTAAATCACTCTCAAAAGGATGGTGGTCGACTAACATTTGAGGGAGAGATTGATGCTTTCCAACAAGTACTTGATGAGTGCTCTCTAATGGATCTGGGAATGCAGTATTGCGACATCGTCTCCTTAACTCTCCTGGCTTCAAATTCTCTTATGAAACCTTGA ATGTTCGAGGTTTGGGGTCACCTCTGGCATTCCGACGTTTGCACAAACTTGTGCATGCTCAAAAACCCCCACGTGGTGTTTTTATCTGAAACGAAGCTCCAACAACGTGAAATGGATTTTGTGCATCATCAGTTGTGCTTCCAGAATTGTTTTACGGTTAATAGTGTTGGTCGTAGGGGTGGCCTTGCTTTGTTATGGGATTCCTCAGTGGGTTTTAGCCTTCTATCTTTTTCCACGCACCATATCAACGGATGGATTGATTGGAATGGTTTGGCTTGGCAACTGACGGGTTTTTACGGGTTTCCAGATCGGGATGCGCACCATCTTTCTTGGAGTCTTCTTCGGCAGCTACATGGTGATCCAAATACTCCTTGGCTTGTCAGTGGAGATTTCAATGCTATCTTAAATCACTCTCAAAAGGATGGTGGTCGACTAACATTTGAGGGAGAGATTGATGCTTTCCAACAAGTACTTGATGAGTGCTCTCTAATGGATCTGGGAATGCAGTATTGCGACATCGTCTCCTTAACTCTCCTGGCTTCAAATTCTCTTATGAAACCTTGA MFEVWGHLWHSDVCTNLCMLKNPHVVFLSETKLQQREMDFVHHQLCFQNCFTVNSVGRRGGLALLWDSSVGFSLLSFSTHHINGWIDWNGLAWQLTGFYGFPDRDAHHLSWSLLRQLHGDPNTPWLVSGDFNAILNHSQKDGGRLTFEGEIDAFQQVLDECSLMDLGMQYCDIVSLTLLASNSLMKP Homology
BLAST of Lag0038290 vs. NCBI nr
Match: OMO59710.1 (reverse transcriptase [Corchorus capsularis]) HSP 1 Score: 149.4 bits (376), Expect = 3.0e-32 Identity = 75/166 (45.18%), Postives = 99/166 (59.64%), Query Frame = 0
BLAST of Lag0038290 vs. NCBI nr
Match: OMO50714.1 (Endonuclease/exonuclease/phosphatase [Corchorus capsularis]) HSP 1 Score: 147.9 bits (372), Expect = 8.7e-32 Identity = 67/152 (44.08%), Postives = 97/152 (63.82%), Query Frame = 0
BLAST of Lag0038290 vs. NCBI nr
Match: KAF5443558.1 (hypothetical protein F2P56_036105, partial [Juglans regia]) HSP 1 Score: 142.9 bits (359), Expect = 2.8e-30 Identity = 70/158 (44.30%), Postives = 103/158 (65.19%), Query Frame = 0
BLAST of Lag0038290 vs. NCBI nr
Match: XP_018816246.1 (uncharacterized protein LOC108987722 [Juglans regia] >KAF5463276.1 hypothetical protein F2P56_019199 [Juglans regia]) HSP 1 Score: 141.0 bits (354), Expect = 1.1e-29 Identity = 66/148 (44.59%), Postives = 96/148 (64.86%), Query Frame = 0
BLAST of Lag0038290 vs. NCBI nr
Match: XP_018812547.1 (uncharacterized protein LOC108984903 [Juglans regia] >KAF5464528.1 hypothetical protein F2P56_014601 [Juglans regia]) HSP 1 Score: 140.6 bits (353), Expect = 1.4e-29 Identity = 66/155 (42.58%), Postives = 100/155 (64.52%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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