Lag0037732 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0037732
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionUnknown protein
Locationchr2: 8658941 .. 8659567 (-)
RNA-Seq ExpressionLag0037732
SyntenyLag0037732
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACATGTGTTCTTGGGAAGACGACGAGGAGAAAGAGAGACTGATCAAAGTGGTGGAGTATTTGGAGCCATTGATGTCCAAAGAGCTTCTCTGCAAATTCCCCGACAACTCCGCCTTCGATTTCGACTACTCTCAGAGCACCATCTGGTCCCCTTTGGTCCCTCGGCCTTACAACTCCATGGATTTGGACGTCATTACCCCCATCAAGCTTCCTTCTGATTCGGAAATGGCGATGGAGCAGTCGACCACGGCGGAGAAGAACAGTTTGAAGAAAGTCACCTCCAACCTCAAGAAGAAGCTCCTCTCCAATGGCTTCAGCATCGGTTTCGGCATTTCAAAGAGCAACAGGAAGATGAAGAGGATGAAGAACAAGAAAATGGCCTCTGATTTCTCCCCCACGCCTCTGAAAGGTGCTTGTTATCCAAATAACAAAAAGGTCAGTTTTGAATCTTGATTTCATTTTGTGTAGCTACTGAAAGCTGACTGCTCTTATTGTTCTTCACTGCATTTTAACTTAAACTCCATGAATGATTAGGGATGGAGCAAGTTGCTGAGAGCAGCCACCAAGCATTTCAAGAAGAAGAAGAAGAAGGATCCTACCTCTCAAATGAAACTCTATTTCTAA

mRNA sequence

ATGAACATGTGTTCTTGGGAAGACGACGAGGAGAAAGAGAGACTGATCAAAGTGGTGGAGTATTTGGAGCCATTGATGTCCAAAGAGCTTCTCTGCAAATTCCCCGACAACTCCGCCTTCGATTTCGACTACTCTCAGAGCACCATCTGGTCCCCTTTGGTCCCTCGGCCTTACAACTCCATGGATTTGGACGTCATTACCCCCATCAAGCTTCCTTCTGATTCGGAAATGGCGATGGAGCAGTCGACCACGGCGGAGAAGAACAGTTTGAAGAAAGTCACCTCCAACCTCAAGAAGAAGCTCCTCTCCAATGGCTTCAGCATCGGTTTCGGCATTTCAAAGAGCAACAGGAAGATGAAGAGGATGAAGAACAAGAAAATGGCCTCTGATTTCTCCCCCACGCCTCTGAAAGGTGCTTGTTATCCAAATAACAAAAAGGGATGGAGCAAGTTGCTGAGAGCAGCCACCAAGCATTTCAAGAAGAAGAAGAAGAAGGATCCTACCTCTCAAATGAAACTCTATTTCTAA

Coding sequence (CDS)

ATGAACATGTGTTCTTGGGAAGACGACGAGGAGAAAGAGAGACTGATCAAAGTGGTGGAGTATTTGGAGCCATTGATGTCCAAAGAGCTTCTCTGCAAATTCCCCGACAACTCCGCCTTCGATTTCGACTACTCTCAGAGCACCATCTGGTCCCCTTTGGTCCCTCGGCCTTACAACTCCATGGATTTGGACGTCATTACCCCCATCAAGCTTCCTTCTGATTCGGAAATGGCGATGGAGCAGTCGACCACGGCGGAGAAGAACAGTTTGAAGAAAGTCACCTCCAACCTCAAGAAGAAGCTCCTCTCCAATGGCTTCAGCATCGGTTTCGGCATTTCAAAGAGCAACAGGAAGATGAAGAGGATGAAGAACAAGAAAATGGCCTCTGATTTCTCCCCCACGCCTCTGAAAGGTGCTTGTTATCCAAATAACAAAAAGGGATGGAGCAAGTTGCTGAGAGCAGCCACCAAGCATTTCAAGAAGAAGAAGAAGAAGGATCCTACCTCTCAAATGAAACTCTATTTCTAA

Protein sequence

MNMCSWEDDEEKERLIKVVEYLEPLMSKELLCKFPDNSAFDFDYSQSTIWSPLVPRPYNSMDLDVITPIKLPSDSEMAMEQSTTAEKNSLKKVTSNLKKKLLSNGFSIGFGISKSNRKMKRMKNKKMASDFSPTPLKGACYPNNKKGWSKLLRAATKHFKKKKKKDPTSQMKLYF
Homology
[Close]
BLAST of Lag0037732 vs. NCBI nr
Match: XP_022976862.1 (uncharacterized protein LOC111477106 [Cucurbita maxima])

HSP 1 Score: 296.6 bits (758), Expect = 1.4e-76
Identity = 153/176 (86.93%), Postives = 162/176 (92.05%), Query Frame = 0 

Query: 1   MNMCSWEDDEEKERLIKVVEYLEPLMSKELLCKFPDNSAFDFDYSQSTIWSPLVPRPYNS 60
           MNM SWEDDEEKERLIKVVEYLEPLMSKELLCKFPDNSAFDFDYSQSTIWSPLVPRPY S
Sbjct: 1   MNMRSWEDDEEKERLIKVVEYLEPLMSKELLCKFPDNSAFDFDYSQSTIWSPLVPRPYQS 60

Query: 61  MDLDVITPIKLPSDSEMAMEQSTTAEKNSLKKVTSNLKKKLLSNGFSIGFGISKSNRKMK 120
           MDLD+ITPIKLPSDSEMA  + TTAEKNSLKK TSNLKKKLLSNG SI FGISKSNRKMK
Sbjct: 61  MDLDLITPIKLPSDSEMAASEKTTAEKNSLKKATSNLKKKLLSNGVSIRFGISKSNRKMK 120

Query: 121 RMKNKKMASDFSPTPLK-GACYPNNKKGWSKLLRAATKHFKKKKKKDPTSQMKLYF 176
           +MKNKK+A+DFSP PL+  ACYP+NKK WSKLL+AATKHF KKKKKDP +QMKLYF
Sbjct: 121 KMKNKKLAADFSPKPLQAAACYPHNKKAWSKLLKAATKHF-KKKKKDPATQMKLYF 175

[Close]
BLAST of Lag0037732 vs. NCBI nr
Match: XP_038898299.1 (uncharacterized protein LOC120085999 [Benincasa hispida])

HSP 1 Score: 294.7 bits (753), Expect = 5.4e-76
Identity = 156/177 (88.14%), Postives = 164/177 (92.66%), Query Frame = 0 

Query: 1   MNMCSWEDDEEKERLIKVVEYLEPLMSKELLCKFPDNSAFDFDYSQSTIWSPLVPRPYNS 60
           MN+ S EDDEE+ERLIKVVEYLEP MSK+LLCKFPDNSAFDF+YSQSTIWSPLVPRPY+S
Sbjct: 1   MNLQSREDDEERERLIKVVEYLEPFMSKQLLCKFPDNSAFDFNYSQSTIWSPLVPRPYHS 60

Query: 61  MDLDVITPIKLPSDSEMAMEQSTTAEKNSLKKVTSNLKKKLLSNGFSIGFGISKSNRKMK 120
           MDLDVITPIKLPSD EMA E  TTAEKNSL+K TSNLKKKLL NGFSI FGISKSNRKM 
Sbjct: 61  MDLDVITPIKLPSDFEMATE--TTAEKNSLRKATSNLKKKLLFNGFSISFGISKSNRKMN 120

Query: 121 RMKNKKMASDFSPTPLK-GACYPNNKKGWSKLLRAATKHF-KKKKKKDPTSQMKLYF 176
           RMKNKK+ASDFSPTPL+ GACYPNNKKGWSKLLRAATKHF KKKKKKDPTSQMKLYF
Sbjct: 121 RMKNKKLASDFSPTPLQGGACYPNNKKGWSKLLRAATKHFKKKKKKKDPTSQMKLYF 175

[Close]
BLAST of Lag0037732 vs. NCBI nr
Match: KAG6591792.1 (hypothetical protein SDJN03_14138, partial [Cucurbita argyrosperma subsp. sororia] >KAG7024669.1 hypothetical protein SDJN02_13487 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 294.3 bits (752), Expect = 7.0e-76
Identity = 155/176 (88.07%), Postives = 163/176 (92.61%), Query Frame = 0 

Query: 1   MNMCSWEDDEEKERLIKVVEYLEPLMSKELLCKFPDNSAFDFDYSQSTIWSPLVPRPYNS 60
           MNM SWEDDEEKERLIKVVEYLEPLMSKELLCKFPDNSAFDFDYSQSTIWSPLVPRPY+S
Sbjct: 1   MNMRSWEDDEEKERLIKVVEYLEPLMSKELLCKFPDNSAFDFDYSQSTIWSPLVPRPYHS 60

Query: 61  MDLDVITPIKLPSDSEMAMEQSTTAEKNSLKKVTSNLKKKLLSNGFSIGFGISKSNRKMK 120
           MDLD+ITPIKLPSDSEMA   STTAEKNSLKK TSNLKKKLLSNG SI FGISKSNRKMK
Sbjct: 61  MDLDLITPIKLPSDSEMA--ASTTAEKNSLKKATSNLKKKLLSNGVSIRFGISKSNRKMK 120

Query: 121 RMKNKKMASDFSPTPLK-GACYPNNKKGWSKLLRAATKHFKKKKKKDPTSQMKLYF 176
           +MKNKK+A+DFSP PL+  ACYP+NKK WSKLL+AATKHF KKKKKDP SQMKLYF
Sbjct: 121 KMKNKKLAADFSPKPLQAAACYPHNKKAWSKLLKAATKHF-KKKKKDPASQMKLYF 173

[Close]
BLAST of Lag0037732 vs. NCBI nr
Match: XP_022936857.1 (uncharacterized protein LOC111443318 [Cucurbita moschata])

HSP 1 Score: 292.4 bits (747), Expect = 2.7e-75
Identity = 151/176 (85.80%), Postives = 160/176 (90.91%), Query Frame = 0 

Query: 1   MNMCSWEDDEEKERLIKVVEYLEPLMSKELLCKFPDNSAFDFDYSQSTIWSPLVPRPYNS 60
           MNM SWEDDEEKERLIKVVEYLEPLMSKELLCKFPDNSAFDFDYSQSTIWSPLVPRPY S
Sbjct: 1   MNMRSWEDDEEKERLIKVVEYLEPLMSKELLCKFPDNSAFDFDYSQSTIWSPLVPRPYQS 60

Query: 61  MDLDVITPIKLPSDSEMAMEQSTTAEKNSLKKVTSNLKKKLLSNGFSIGFGISKSNRKMK 120
           MDLD+ITPIKLPSDSEM   + T AEKNSLK+ TSNLKKKLLSNG SI FGISKSNRKMK
Sbjct: 61  MDLDLITPIKLPSDSEMVASEKTMAEKNSLKEATSNLKKKLLSNGVSIRFGISKSNRKMK 120

Query: 121 RMKNKKMASDFSPTPLK-GACYPNNKKGWSKLLRAATKHFKKKKKKDPTSQMKLYF 176
           +MKNKK+A+DFSP PL+  ACYP+NKK WSKLL+AATKHF KKKKKDP SQMKLYF
Sbjct: 121 KMKNKKLAADFSPKPLQPAACYPHNKKAWSKLLKAATKHF-KKKKKDPASQMKLYF 175

[Close]
BLAST of Lag0037732 vs. NCBI nr
Match: XP_023536350.1 (uncharacterized protein LOC111797546 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 292.0 bits (746), Expect = 3.5e-75
Identity = 154/176 (87.50%), Postives = 161/176 (91.48%), Query Frame = 0 

Query: 1   MNMCSWEDDEEKERLIKVVEYLEPLMSKELLCKFPDNSAFDFDYSQSTIWSPLVPRPYNS 60
           MNM  WEDDEEKERLIKVVEYLEPLMSKELLCKFPDNSAFDFDYSQSTIWSPLVPRPY+S
Sbjct: 1   MNMRPWEDDEEKERLIKVVEYLEPLMSKELLCKFPDNSAFDFDYSQSTIWSPLVPRPYHS 60

Query: 61  MDLDVITPIKLPSDSEMAMEQSTTAEKNSLKKVTSNLKKKLLSNGFSIGFGISKSNRKMK 120
           MDLD+ITPIKLPSDSEMA   STT EKNSLKK TSNLKKKLLSNG SI FGISKSNRKMK
Sbjct: 61  MDLDLITPIKLPSDSEMA-ASSTTVEKNSLKKATSNLKKKLLSNGVSIRFGISKSNRKMK 120

Query: 121 RMKNKKMASDFSPTPLK-GACYPNNKKGWSKLLRAATKHFKKKKKKDPTSQMKLYF 176
           +MKNKKMA+DFSP PL+  ACYP+NKK WSKLL+AATKHF KKKKKDP SQMKLYF
Sbjct: 121 KMKNKKMAADFSPKPLQAAACYPHNKKAWSKLLKAATKHF-KKKKKDPASQMKLYF 174

The following BLAST results are available for this feature:
BLAST of Lag0037732 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022976862.11.4e-7686.93uncharacterized protein LOC111477106 [Cucurbita maxima][more]
XP_038898299.15.4e-7688.14uncharacterized protein LOC120085999 [Benincasa hispida][more]
KAG6591792.17.0e-7688.07hypothetical protein SDJN03_14138, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022936857.12.7e-7585.80uncharacterized protein LOC111443318 [Cucurbita moschata][more]
XP_023536350.13.5e-7587.50uncharacterized protein LOC111797546 [Cucurbita pepo subsp. pepo][more]
BLAST of Lag0037732 vs. NCBI nr
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR34287OS06G0551500 PROTEIN-RELATEDcoord: 6..173
NoneNo IPR availablePANTHERPTHR34287:SF4OSJNBB0116K07.5 PROTEINcoord: 6..173

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0037732.1Lag0037732.1mRNA