Lag0037630 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0037630
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Photosystem II 10 kDa polypeptide, chloroplastic
Location	chr2: 7853685 .. 7856526 (+)
RNA-Seq Expression	Lag0037630
Synteny	Lag0037630

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAACCTCCGTCGTCGCTTCTTCTCTCGCCCTCAAACCGGCCAATTTCACCGTCGAGAGATCGGCGGCCGCTCGAGGCCTTCTTCCTTCACTCGCGAGAACTTCTTCGTTCAGAATCGAGGCCAGCGGCGGCAAGAAAATCAAGACCGATAAGCCCTACGGTTCGTATTTATAGTCCTACGCGTAATGCGATTCGATTTCGACTATTTCGGTCGCGTAAATCTCTTTCGTCGAGGATCGAAACTTGTTCTTCTTCCGTAAAATTGATTGAAATTTTGGAAAATTTGGCCGGATGTTTACAGGAATCGGCGGCGGCATGAACTTGAGGAACGGCGTCGATGCGTCCGGGAGGAAACCGACGGTAAGATTGCAAAGATGCCGATTCCCTCTGTAGAAATTCCGTCCTCGTAATTTGCTTGTGAAATGCCTCCTTGCATGAATGCAATCGATCGGAATTTCATTTCATGCAATCTTCTTCCTCACGCTTTTGAACTTCTTCTTCACGTTCCATGCTTATGAAGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGATACCATGCTTATGAAGATTTCGAGTTCATGTATATTACGTCAAAATTAATATAATTTGTATTTTAACGTGGCAAAACTTATACTCTAAAAAGGCAAGGCGCAATACGTGTAAATTATGAACTCTTATATTTGAGAAAATTATTTATTTTGATATGGATAAAAATATTTCATCAATATTAAGAGAGAAGTTAATACGATGCATTAATCAACTGAGAGTATATCATAAATAATATTTTATATTTTTTTACATATTTTAAAGAAAAATACTTGGTTGCATACTGATAAAATGTTGATAACTAAGAACGATAAAATGTAGGGAGATCCATACATATCATTATGCAGTCAAATATTGTTCTATTTTAAATATCAACTCGAACATAGTTCTATAGGTCTGAACAAAAGGTCTAAGATTTATATCTCCATCCTTACTTGTTGAACTAAAAATAAATTATGAGGTTGGAAGACAATATTTTTTTTGTTATATCTCCATCCTTAATATTTATTGTTATATCAATATATATATATATATATTTTTTATACAACTTCTGAACGTTTGGTTAAGATTTTAAAGCATTTTTCAAAATGTAGGTTGGAAGACAAATAAATCATTAGTCAGCTGGCAAACTAAATTTAAAGTTTAAACAAAATTTTTATCACGTAGTCTTACACTAATACAATTCACATCTTAAAACTTTATTTTAAACGACTATATCATCTATGTATTTGTTTTTTTTTCTAGATATCTTACAATAAATTTCCAAATGTGTCTAATTTTTCTTTTCCAAAAAAAAAAAAAAAGGAAAAACAAAGTCTTACCTCTCCTATTTGTAAAAAATTTAATGGTAACTGGTAAGAAATTATTATTATTATTATTATTTTTTAGAAAAAAATGGTAAGAAATTATTACTAATAGGTAAGGTTGAGAAAGAATCTCTTTCATCATTCTAATGTTGTTTGGTTACAATCTAAAAGACACAAGTTTGATTCAGGGCAAGGGAGTGTACCAATACGTGGACAAGTACGGTGCCAATGTTGATGGATACAGGTACATCTACTCTTTATTCTTTAGATTTACTTTAAAATTGGTAACGATTCAATTTACACCGTGAAAAATCCTATCGAAATTAAATGCCAATATGTATTACTAAAGATTTAGTTTATGAAGTTTATAAACACATTTGGTGTCTTATTAATTTTAGGTTAAATTACATGTTTAGTCTCCGAACTTTTAGGATTGTGTCAATTTAATCTCTAAACTTAAAAAAGTTTCAAATATGACCTCAAACTTCAATAAGTCCTTGAACTTTAAAAAGTATGCAATAGGTCTTTAAACTTTTACTTTTGTATCCAATAGGTTCTTCAACTTTTAATTTTGTATTTAATAAGTCATTGACCTCTTCAACATTTTTTGTTTTTTTAGTAATTTGGGGGTGGAGGAATTCGAATTTCTGACCTTATGGTCGAGGGTACATGCCAATTAACGCGGACCTAAGCTCGCTTTGGCCTCTTCAACATTTTTTTAAAATACAATATTTGAAGTTTAGAGTCTCAATAAGCATAAAATTCAATTTCTTATATATATAGTAGATTGGTTAATTTTTAAAAATCTCAAATATGTCAAAGACCTATTAGACTATTTTAAAATTCGAGGACCAATTAGACATTTTAAAAGTTTAAGGTCCTATTAGATACAACTCTGAAAGTTAGGACTAAACTTGTAATAAAATCTTAATTTTACCAGTATAAGAAATCCATTACAATATTTTTAGCATAAGTTAACTCATAAGTACAATTGTTTTTTTTTTTTTTTTTTCCTTATTAGAAAGTTCAATGACTTAATGGGTAAGAATTAAAGTTCATGAACTAAATTGATACTTTCCTAAAAGTTTAGAGACCAACTAGATATATTTATGATCCTTTTATGCTCCATAGTTTACAGTCATAATTTATTAGAAATGTATGTATATCAAAGAAGTTTACACGATTATTTGGTTTTTGCAGTCCTATCTACAACACTGACGAATGGTCTCCTACTGGTGATGTCTATGTTGGGGGTAAGAAATTCTAACCAATAGTTTTTCATTAAAAAGAAATTAGAAATTTCTAACGCATTTCAATAAGGAATGAGAATTTACCTTAAAATCGGCTGAAATGAAAAATATTGCATTGTAGGCACAACTGGGCTGGCAATTTGGGCCGTAACCCTGCTGGGCCTGCTTGCTGGAGGGGCCCTTCTTGTCTACAACACAAGTGCTCTGGCCCAGTGA

mRNA sequence

ATGGCAACCTCCGTCGTCGCTTCTTCTCTCGCCCTCAAACCGGCCAATTTCACCGTCGAGAGATCGGCGGCCGCTCGAGGCCTTCTTCCTTCACTCGCGAGAACTTCTTCGTTCAGAATCGAGGCCAGCGGCGGCAAGAAAATCAAGACCGATAAGCCCTACGGAATCGGCGGCGGCATGAACTTGAGGAACGGCGTCGATGCGTCCGGGAGGAAACCGACGGGCAAGGGAGTGTACCAATACGTGGACAAGTACGGTGCCAATGTTGATGGATACAGTCCTATCTACAACACTGACGAATGGTCTCCTACTGGTGATGTCTATGTTGGGGGCACAACTGGGCTGGCAATTTGGGCCGTAACCCTGCTGGGCCTGCTTGCTGGAGGGGCCCTTCTTGTCTACAACACAAGTGCTCTGGCCCAGTGA

Coding sequence (CDS)

ATGGCAACCTCCGTCGTCGCTTCTTCTCTCGCCCTCAAACCGGCCAATTTCACCGTCGAGAGATCGGCGGCCGCTCGAGGCCTTCTTCCTTCACTCGCGAGAACTTCTTCGTTCAGAATCGAGGCCAGCGGCGGCAAGAAAATCAAGACCGATAAGCCCTACGGAATCGGCGGCGGCATGAACTTGAGGAACGGCGTCGATGCGTCCGGGAGGAAACCGACGGGCAAGGGAGTGTACCAATACGTGGACAAGTACGGTGCCAATGTTGATGGATACAGTCCTATCTACAACACTGACGAATGGTCTCCTACTGGTGATGTCTATGTTGGGGGCACAACTGGGCTGGCAATTTGGGCCGTAACCCTGCTGGGCCTGCTTGCTGGAGGGGCCCTTCTTGTCTACAACACAAGTGCTCTGGCCCAGTGA

Protein sequence

MATSVVASSLALKPANFTVERSAAARGLLPSLARTSSFRIEASGGKKIKTDKPYGIGGGMNLRNGVDASGRKPTGKGVYQYVDKYGANVDGYSPIYNTDEWSPTGDVYVGGTTGLAIWAVTLLGLLAGGALLVYNTSALAQ

Homology

[Close]

BLAST of Lag0037630 vs. NCBI nr
Match: XP_038899014.1 (photosystem II 10 kDa polypeptide, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 233.4 bits (594), Expect = 1.2e-57
Identity = 127/146 (86.99%), Postives = 133/146 (91.10%), Query Frame = 0


Query: 1   MATSVV-ASSLALKPANFTVERSAA---ARGLLPSLART-SSFRIEASGGKKIKTDKPYG 60
           MA SVV ASSL+LKP+NF V+RSAA       +PSLART SSF++EASGGKKIKTDKPYG
Sbjct: 1   MAISVVAASSLSLKPSNFAVQRSAADLRRHVPIPSLARTSSSFKVEASGGKKIKTDKPYG 60

Query: 61  IGGGMNLRNGVDASGRKPTGKGVYQYVDKYGANVDGYSPIYNTDEWSPTGDVYVGGTTGL 120
           IGGGMNLRNGVDASGRKPTGKGVYQYVDKYGANVDGYSPIYNTDEWSPTGDVY  GTTGL
Sbjct: 61  IGGGMNLRNGVDASGRKPTGKGVYQYVDKYGANVDGYSPIYNTDEWSPTGDVYAAGTTGL 120

Query: 121 AIWAVTLLGLLAGGALLVYNTSALAQ 142
           AIWAVTLLGLLAGGALLVYNTSALAQ
Sbjct: 121 AIWAVTLLGLLAGGALLVYNTSALAQ 146

[Close]

BLAST of Lag0037630 vs. NCBI nr
Match: XP_011097661.1 (photosystem II 10 kDa polypeptide, chloroplastic [Sesamum indicum])

HSP 1 Score: 224.6 bits (571), Expect = 5.5e-55
Identity = 116/138 (84.06%), Postives = 127/138 (92.03%), Query Frame = 0


Query: 4   SVVASSLALKPANFTVERSAAARGLLPSLARTSSFRIEASGGKKIKTDKPYGIGGGMNLR 63
           S V SS++LKPA FT E+S A RG LPSLART+ FR+ ASGGKKIKTDKPYG+GGGM LR
Sbjct: 3   SAVMSSVSLKPAPFTAEKS-AVRG-LPSLARTTRFRVVASGGKKIKTDKPYGLGGGMELR 62

Query: 64  NGVDASGRKPTGKGVYQYVDKYGANVDGYSPIYNTDEWSPTGDVYVGGTTGLAIWAVTLL 123
           NGVDASGRKPTGKGVYQ+VDKYGANVDGYSPIYN DEWSP+GDVYVGGTTGLAIWAVTL+
Sbjct: 63  NGVDASGRKPTGKGVYQFVDKYGANVDGYSPIYNEDEWSPSGDVYVGGTTGLAIWAVTLV 122

Query: 124 GLLAGGALLVYNTSALAQ 142
           G+LAGGALLVYNTSAL+Q
Sbjct: 123 GILAGGALLVYNTSALSQ 138

[Close]

BLAST of Lag0037630 vs. NCBI nr
Match: KAG8386594.1 (hypothetical protein BUALT_Bualt03G0164500 [Buddleja alternifolia])

HSP 1 Score: 223.0 bits (567), Expect = 1.6e-54
Identity = 115/141 (81.56%), Postives = 131/141 (92.91%), Query Frame = 0


Query: 1   MATSVVASSLALKPANFTVERSAAARGLLPSLARTSSFRIEASGGKKIKTDKPYGIGGGM 60
           MAT+V+ SS++LKP+ F V+RSAA RG LPSLART++ R++ASGGKKIKTDKP+GIGGGM
Sbjct: 1   MATTVM-SSISLKPSPFAVDRSAAVRG-LPSLARTTTLRVQASGGKKIKTDKPFGIGGGM 60

Query: 61  NLRNGVDASGRKPTGKGVYQYVDKYGANVDGYSPIYNTDEWSPTGDVYVGGTTGLAIWAV 120
           +LR+G DASGRKPTGKGVYQ+VDKYGANVDGYSPIYN +EWSP+GDVYVGGTTGLAIWA 
Sbjct: 61  DLRDGKDASGRKPTGKGVYQFVDKYGANVDGYSPIYNEEEWSPSGDVYVGGTTGLAIWAA 120

Query: 121 TLLGLLAGGALLVYNTSALAQ 142
           TL GLLAGGALLVYNTSALAQ
Sbjct: 121 TLAGLLAGGALLVYNTSALAQ 139

[Close]

BLAST of Lag0037630 vs. NCBI nr
Match: XP_002529952.1 (photosystem II 10 kDa polypeptide, chloroplastic [Ricinus communis] >EEF32429.1 Photosystem II 10 kDa polypeptide, chloroplast precursor, putative [Ricinus communis])

HSP 1 Score: 223.0 bits (567), Expect = 1.6e-54
Identity = 117/141 (82.98%), Postives = 131/141 (92.91%), Query Frame = 0


Query: 1   MATSVVASSLALKPANFTVERSAAARGLLPSLARTSSFRIEASGGKKIKTDKPYGIGGGM 60
           MA+SV+A S++LKP+ FTV++S++ RG LP+L+R  +FRIEASGGKKIKTDKPYGIGGGM
Sbjct: 1   MASSVMA-SVSLKPSPFTVQKSSSVRG-LPTLSR-RTFRIEASGGKKIKTDKPYGIGGGM 60

Query: 61  NLRNGVDASGRKPTGKGVYQYVDKYGANVDGYSPIYNTDEWSPTGDVYVGGTTGLAIWAV 120
            LRNGVDASGRKPTGKGVYQ+VDKYGANVDGYSPIYNTDEWSPTGDVY GG TGLAIWA+
Sbjct: 61  ELRNGVDASGRKPTGKGVYQFVDKYGANVDGYSPIYNTDEWSPTGDVYAGGATGLAIWAI 120

Query: 121 TLLGLLAGGALLVYNTSALAQ 142
           TL GLLAGGALLVYNTSALAQ
Sbjct: 121 TLAGLLAGGALLVYNTSALAQ 138

[Close]

BLAST of Lag0037630 vs. NCBI nr
Match: KAG8365217.1 (hypothetical protein BUALT_Bualt18G0081400 [Buddleja alternifolia])

HSP 1 Score: 222.6 bits (566), Expect = 2.1e-54
Identity = 116/141 (82.27%), Postives = 129/141 (91.49%), Query Frame = 0


Query: 1   MATSVVASSLALKPANFTVERSAAARGLLPSLARTSSFRIEASGGKKIKTDKPYGIGGGM 60
           MAT+ + SSL+LKP+ F VE+SAA RG LPSLART+  R+EASGGKKIKTDKPYGIGGGM
Sbjct: 1   MATT-ITSSLSLKPSPFAVEKSAAVRG-LPSLARTTGLRVEASGGKKIKTDKPYGIGGGM 60

Query: 61  NLRNGVDASGRKPTGKGVYQYVDKYGANVDGYSPIYNTDEWSPTGDVYVGGTTGLAIWAV 120
           +LR+GVDASGRK  GKGVYQ+VDKYGANVDGYSPIYN +EWSP+GDVYVGGTTGLAIWA+
Sbjct: 61  DLRDGVDASGRKGRGKGVYQFVDKYGANVDGYSPIYNEEEWSPSGDVYVGGTTGLAIWAI 120

Query: 121 TLLGLLAGGALLVYNTSALAQ 142
           TL GLLAGGALLVYNTSALAQ
Sbjct: 121 TLAGLLAGGALLVYNTSALAQ 139

[Close]

BLAST of Lag0037630 vs. ExPASy Swiss-Prot
Match: P10690 (Photosystem II 10 kDa polypeptide, chloroplastic OS=Spinacia oleracea OX=3562 GN=PSBR PE=2 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 3.5e-52
Identity = 110/142 (77.46%), Postives = 125/142 (88.03%), Query Frame = 0


Query: 1   MATSVVASSLALKPANFTVERSAAARGLLPSLARTS-SFRIEASGGKKIKTDKPYGIGGG 60
           MATSV+ SSL+LKP++F V+  +A +G LPSL+R+S SF + ASG KKIK DKP GIGGG
Sbjct: 1   MATSVM-SSLSLKPSSFGVDTKSAVKG-LPSLSRSSASFTVRASGVKKIKVDKPLGIGGG 60

Query: 61  MNLRNGVDASGRKPTGKGVYQYVDKYGANVDGYSPIYNTDEWSPTGDVYVGGTTGLAIWA 120
           M LR+GVD+SGRKPTGKGVYQ+VDKYGANVDGYSPIYN +EW+PTGDVY GGTTGL IWA
Sbjct: 61  MKLRDGVDSSGRKPTGKGVYQFVDKYGANVDGYSPIYNEEEWAPTGDVYAGGTTGLLIWA 120

Query: 121 VTLLGLLAGGALLVYNTSALAQ 142
           VTL GLLAGGALLVYNTSALAQ
Sbjct: 121 VTLAGLLAGGALLVYNTSALAQ 140

[Close]

BLAST of Lag0037630 vs. ExPASy Swiss-Prot
Match: P06183 (Photosystem II 10 kDa polypeptide, chloroplastic OS=Solanum tuberosum OX=4113 GN=PSBR PE=2 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 4.5e-52
Identity = 111/139 (79.86%), Postives = 125/139 (89.93%), Query Frame = 0


Query: 4   SVVASSLALKPANFTVERSAAARGLLPSLAR-TSSFRIEASGGKKIKTDKPYGIGGGMNL 63
           S V SSL+LKP  FT+E++ + +G LPSLAR +SSF++ ASG KK+KTDKPYGI G M L
Sbjct: 3   STVMSSLSLKP-TFTLEKT-SVKG-LPSLARSSSSFKVVASGVKKLKTDKPYGINGSMAL 62

Query: 64  RNGVDASGRKPTGKGVYQYVDKYGANVDGYSPIYNTDEWSPTGDVYVGGTTGLAIWAVTL 123
           R+GVDASGRKP GKGVYQYVDKYGANVDGYSPIYNTDEWSP+GDVYVGGTTGLAIWAVTL
Sbjct: 63  RDGVDASGRKPKGKGVYQYVDKYGANVDGYSPIYNTDEWSPSGDVYVGGTTGLAIWAVTL 122

Query: 124 LGLLAGGALLVYNTSALAQ 142
           +G+LAGGALLVYNTSALAQ
Sbjct: 123 VGILAGGALLVYNTSALAQ 138

[Close]

BLAST of Lag0037630 vs. ExPASy Swiss-Prot
Match: Q40163 (Photosystem II 10 kDa polypeptide, chloroplastic OS=Solanum lycopersicum OX=4081 GN=PSBR PE=2 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 1.3e-51
Identity = 111/139 (79.86%), Postives = 123/139 (88.49%), Query Frame = 0


Query: 4   SVVASSLALKPANFTVERSAAARGLLPSLAR-TSSFRIEASGGKKIKTDKPYGIGGGMNL 63
           S V SSL+LKP  FT+E+  + +G LPSL R +SSF++ ASG KK+KTDKPYGI G M L
Sbjct: 3   STVMSSLSLKP-TFTLEK-ISVKG-LPSLTRSSSSFKVVASGVKKLKTDKPYGINGSMAL 62

Query: 64  RNGVDASGRKPTGKGVYQYVDKYGANVDGYSPIYNTDEWSPTGDVYVGGTTGLAIWAVTL 123
           R+GVDASGRKP GKGVYQYVDKYGANVDGYSPIYNTDEWSP+GDVYVGGTTGLAIWAVTL
Sbjct: 63  RDGVDASGRKPKGKGVYQYVDKYGANVDGYSPIYNTDEWSPSGDVYVGGTTGLAIWAVTL 122

Query: 124 LGLLAGGALLVYNTSALAQ 142
           LG+LAGGALLVYNTSALAQ
Sbjct: 123 LGILAGGALLVYNTSALAQ 138

[Close]

BLAST of Lag0037630 vs. ExPASy Swiss-Prot
Match: Q40519 (Photosystem II 10 kDa polypeptide, chloroplastic OS=Nicotiana tabacum OX=4097 GN=PSBR PE=2 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 6.6e-51
Identity = 105/138 (76.09%), Postives = 126/138 (91.30%), Query Frame = 0


Query: 5   VVASSLALKPANFTVERSAAARGLLPSLAR-TSSFRIEASGGKKIKTDKPYGIGGGMNLR 64
           + ++ ++LKPA F+VE++ A +G LPSLAR +SSFR++ASG KK+KTDKPYGI G M+LR
Sbjct: 1   MASTVMSLKPAPFSVEKT-AVKG-LPSLARSSSSFRVQASGVKKLKTDKPYGINGSMSLR 60

Query: 65  NGVDASGRKPTGKGVYQYVDKYGANVDGYSPIYNTDEWSPTGDVYVGGTTGLAIWAVTLL 124
           +GVDASGRK  GKGVYQ+VDKYGANVDGYSPIYNTD+WSP+GDVYVGGTTGLAIWAVTL+
Sbjct: 61  DGVDASGRKQKGKGVYQFVDKYGANVDGYSPIYNTDDWSPSGDVYVGGTTGLAIWAVTLV 120

Query: 125 GLLAGGALLVYNTSALAQ 142
           G+LAGGALLV+NTSALAQ
Sbjct: 121 GILAGGALLVFNTSALAQ 136

[Close]

BLAST of Lag0037630 vs. ExPASy Swiss-Prot
Match: P49108 (Photosystem II 10 kDa polypeptide, chloroplastic OS=Brassica campestris OX=3711 GN=PSBR PE=2 SV=1)

HSP 1 Score: 195.3 bits (495), Expect = 4.7e-49
Identity = 108/143 (75.52%), Postives = 120/143 (83.92%), Query Frame = 0


Query: 1   MATSVVASSLALKPANFTVERSAAARGLLPSLART--SSFRIEASGGKKIKTDKPYGIGG 60
           MA SV+ SS+ LKPA FTVE+  +ARG LPSL R   SSFRI ASG KKIKTDKP+G+ G
Sbjct: 1   MAASVMLSSVTLKPAGFTVEK-MSARG-LPSLTRASPSSFRIVASGVKKIKTDKPFGVNG 60

Query: 61  GMNLRNGVDASGRKPTGKGVYQYVDKYGANVDGYSPIYNTDEWSPTGDVYVGGTTGLAIW 120
            M+LR+GVDASGRK  G GVY++VDKYGANVDGYSPIYN DEWS +GDVY GG TGLAIW
Sbjct: 61  SMDLRDGVDASGRKGKGYGVYKFVDKYGANVDGYSPIYNEDEWSASGDVYKGGVTGLAIW 120

Query: 121 AVTLLGLLAGGALLVYNTSALAQ 142
           AVTL G+LAGGALLVYNTSALAQ
Sbjct: 121 AVTLAGILAGGALLVYNTSALAQ 141

The following BLAST results are available for this feature:

BLAST of Lag0037630 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038899014.1	1.2e-57	86.99	photosystem II 10 kDa polypeptide, chloroplastic-like [Benincasa hispida]	[more]
XP_011097661.1	5.5e-55	84.06	photosystem II 10 kDa polypeptide, chloroplastic [Sesamum indicum]	[more]
KAG8386594.1	1.6e-54	81.56	hypothetical protein BUALT_Bualt03G0164500 [Buddleja alternifolia]	[more]
XP_002529952.1	1.6e-54	82.98	photosystem II 10 kDa polypeptide, chloroplastic [Ricinus communis] >EEF32429.1 ...	[more]
KAG8365217.1	2.1e-54	82.27	hypothetical protein BUALT_Bualt18G0081400 [Buddleja alternifolia]	[more]

BLAST of Lag0037630 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P10690	3.5e-52	77.46	Photosystem II 10 kDa polypeptide, chloroplastic OS=Spinacia oleracea OX=3562 GN...	[more]
P06183	4.5e-52	79.86	Photosystem II 10 kDa polypeptide, chloroplastic OS=Solanum tuberosum OX=4113 GN...	[more]
Q40163	1.3e-51	79.86	Photosystem II 10 kDa polypeptide, chloroplastic OS=Solanum lycopersicum OX=4081...	[more]
Q40519	6.6e-51	76.09	Photosystem II 10 kDa polypeptide, chloroplastic OS=Nicotiana tabacum OX=4097 GN...	[more]
P49108	4.7e-49	75.52	Photosystem II 10 kDa polypeptide, chloroplastic OS=Brassica campestris OX=3711 ...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006814	Photosystem II PsbR	PFAM	PF04725	PsbR	coord: 43..140 e-value: 2.5E-50 score: 168.9
IPR006814	Photosystem II PsbR	PANTHER	PTHR34369	PHOTOSYSTEM II 10 KDA POLYPEPTIDE, CHLOROPLASTIC	coord: 1..141
None	No IPR available	PANTHER	PTHR34369:SF7	OS07G0147550 PROTEIN	coord: 1..141

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0037630.1	Lag0037630.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015979	photosynthesis
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009654	photosystem II oxygen evolving complex
cellular_component	GO:0009523	photosystem II
cellular_component	GO:0042651	thylakoid membrane