
Lag0036999 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGCGAGTTGTTCCAGATGTGGATGGGGATCGCCAGATGGGGAAGAAACTCAGGGCCGACACCCAAGATTGTGGAGGAGGAGGAGCCGCCTCCGACAAGACTGGCTTTGTCAATTTGGATGATAATTTGCTCTTTGAGGTTTTCAAGCATGTGGATGCCAGGACTCTGGCTATGGCGGCCTGTGTGAGCAAGCAATGGCACAAAACGGCCGAAGACGAGCGCCTTTGGGAGCTGATCTGCACCAGGCACTGGGCCAACACCGGCTGCGGCAACCAACAACTCCGATCTGTAGTTCTAGCCCTCGGCGGCTTCCGTCGCCTCCACTCGCTCTTCATCTGGCCGCTTACCAAGCCCCAATCGTCATCGTCCACGTCTTCATCGGCTTCGTCCTCTTCGCCGTCGTCGTCGTCTTGGTCTCCGTTTCCGGCGATGATTGGGTCGAAACCGCCCGCCCGGTGGGGGAAGGATGAGGTCCATCTGTCGCTGTCGCTTCTGTCAATTCGTTACTACGAGAAGATGAATTTCAGCAACAGAGGCAGATGA ATGAAGCGAGTTGTTCCAGATGTGGATGGGGATCGCCAGATGGGGAAGAAACTCAGGGCCGACACCCAAGATTGTGGAGGAGGAGGAGCCGCCTCCGACAAGACTGGCTTTGTCAATTTGGATGATAATTTGCTCTTTGAGGTTTTCAAGCATGTGGATGCCAGGACTCTGGCTATGGCGGCCTGTGTGAGCAAGCAATGGCACAAAACGGCCGAAGACGAGCGCCTTTGGGAGCTGATCTGCACCAGGCACTGGGCCAACACCGGCTGCGGCAACCAACAACTCCGATCTGTAGTTCTAGCCCTCGGCGGCTTCCGTCGCCTCCACTCGCTCTTCATCTGGCCGCTTACCAAGCCCCAATCGTCATCGTCCACGTCTTCATCGGCTTCGTCCTCTTCGCCGTCGTCGTCGTCTTGGTCTCCGTTTCCGGCGATGATTGGGTCGAAACCGCCCGCCCGGTGGGGGAAGGATGAGGTCCATCTGTCGCTGTCGCTTCTGTCAATTCGTTACTACGAGAAGATGAATTTCAGCAACAGAGGCAGATGA ATGAAGCGAGTTGTTCCAGATGTGGATGGGGATCGCCAGATGGGGAAGAAACTCAGGGCCGACACCCAAGATTGTGGAGGAGGAGGAGCCGCCTCCGACAAGACTGGCTTTGTCAATTTGGATGATAATTTGCTCTTTGAGGTTTTCAAGCATGTGGATGCCAGGACTCTGGCTATGGCGGCCTGTGTGAGCAAGCAATGGCACAAAACGGCCGAAGACGAGCGCCTTTGGGAGCTGATCTGCACCAGGCACTGGGCCAACACCGGCTGCGGCAACCAACAACTCCGATCTGTAGTTCTAGCCCTCGGCGGCTTCCGTCGCCTCCACTCGCTCTTCATCTGGCCGCTTACCAAGCCCCAATCGTCATCGTCCACGTCTTCATCGGCTTCGTCCTCTTCGCCGTCGTCGTCGTCTTGGTCTCCGTTTCCGGCGATGATTGGGTCGAAACCGCCCGCCCGGTGGGGGAAGGATGAGGTCCATCTGTCGCTGTCGCTTCTGTCAATTCGTTACTACGAGAAGATGAATTTCAGCAACAGAGGCAGATGA MKRVVPDVDGDRQMGKKLRADTQDCGGGGAASDKTGFVNLDDNLLFEVFKHVDARTLAMAACVSKQWHKTAEDERLWELICTRHWANTGCGNQQLRSVVLALGGFRRLHSLFIWPLTKPQSSSSTSSSASSSSPSSSSWSPFPAMIGSKPPARWGKDEVHLSLSLLSIRYYEKMNFSNRGR Homology
BLAST of Lag0036999 vs. NCBI nr
Match: XP_038900230.1 (F-box protein GID2 [Benincasa hispida]) HSP 1 Score: 332.0 bits (850), Expect = 3.2e-87 Identity = 165/181 (91.16%), Postives = 173/181 (95.58%), Query Frame = 0
BLAST of Lag0036999 vs. NCBI nr
Match: XP_011654137.1 (F-box protein GID2 [Cucumis sativus] >KGN55239.1 hypothetical protein Csa_012230 [Cucumis sativus]) HSP 1 Score: 322.0 bits (824), Expect = 3.3e-84 Identity = 166/190 (87.37%), Postives = 173/190 (91.05%), Query Frame = 0
BLAST of Lag0036999 vs. NCBI nr
Match: XP_022977120.1 (F-box protein GID2-like [Cucurbita maxima]) HSP 1 Score: 318.5 bits (815), Expect = 3.6e-83 Identity = 160/181 (88.40%), Postives = 167/181 (92.27%), Query Frame = 0
BLAST of Lag0036999 vs. NCBI nr
Match: XP_008452610.1 (PREDICTED: F-box protein GID2-like [Cucumis melo] >KAA0064421.1 F-box protein GID2-like [Cucumis melo var. makuwa] >TYK20166.1 F-box protein GID2-like [Cucumis melo var. makuwa]) HSP 1 Score: 318.2 bits (814), Expect = 4.7e-83 Identity = 165/190 (86.84%), Postives = 171/190 (90.00%), Query Frame = 0
BLAST of Lag0036999 vs. NCBI nr
Match: KAG6608444.1 (F-box protein GID2, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 315.8 bits (808), Expect = 2.3e-82 Identity = 161/181 (88.95%), Postives = 168/181 (92.82%), Query Frame = 0
BLAST of Lag0036999 vs. ExPASy Swiss-Prot
Match: Q9STX3 (F-box protein GID2 OS=Arabidopsis thaliana OX=3702 GN=GID2 PE=1 SV=1) HSP 1 Score: 186.4 bits (472), Expect = 2.8e-46 Identity = 98/183 (53.55%), Postives = 120/183 (65.57%), Query Frame = 0
BLAST of Lag0036999 vs. ExPASy Swiss-Prot
Match: Q7XAK4 (F-box protein GID2 OS=Oryza sativa subsp. japonica OX=39947 GN=GID2 PE=1 SV=1) HSP 1 Score: 120.2 bits (300), Expect = 2.5e-26 Identity = 64/139 (46.04%), Postives = 85/139 (61.15%), Query Frame = 0
BLAST of Lag0036999 vs. ExPASy Swiss-Prot
Match: Q9LUB6 (F-box protein SNE OS=Arabidopsis thaliana OX=3702 GN=SNE PE=1 SV=1) HSP 1 Score: 67.4 bits (163), Expect = 1.9e-10 Identity = 40/137 (29.20%), Postives = 64/137 (46.72%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|