
Lag0036943 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGACCCCGAAACCCTACCCGCATTCGAATCCTCTGCTATCCATTCCCTCTTTCATCCACCATCACTGTTCCAGACTCGGAGCTGAGCTCTCCAATCGTCTCGAAGAGACAAAGCGCTTTGCCGGAACCTTCGCCAGAAGATGGCCGGCGGAGGCTAATTGGCGATCCTTTACTACACCAGCTTTCGCGTCCCTCGCGCAGCACACTAATTCCTTGGCTGCCACTCTGAGCTCCGACCAAGTGGCTAAGTCTCTCGTCGGCACGGCGGTCTACACTGTTAGCAATTCGAACAACGAGTTTGTGCTCATTTCTGATCCCAATGGAGTCAAGTCAATTGGGTTGCTATGCTTCCGCAAGGAAGATGCCGAGACCTTTTTGGCTCAGGTATGGTTTGCTCCTGTTTTTTTTTTTCCATCTATGAATTGTGAAATGACAGTGGAGAAGGGTAGGAAAAACTTGTCGCAATCAGTTTTGTGGGTGTTTTTTTTTAGTGGAATTTGTGTTTGATGATGTGGAAACTTTTTAGCTTTTGGAGTAAGTTTACCATTCTAATTCTTCTTTTGGAATGTGATGTTTTATCCATAGTTGTTTAGAGTTCTGATGTTTATATTACAATATGATATCTGTTATAGTGAATTTCAGGTCCGATCGAGGAAAAGAGAACTGAGAAGTAATGCGAAGGTTGTCCCAATTACCCTTGACCAGGTACCTTGCTTGCATCATCAAATTTTGCTTCTTGAGTACCAAACTTGTTCTGTGCTGTAGTTATTTTGTTCTTTCCCCCAATGTTCAACTGTGTGGTGGAATTCCGTAGCGTAGTGCCTATAATGTGGGTGGTAGGTAACTGAATTTGCTGGTTTATATTCCTGATGAATGGTATGAGACAATGAGGAGGTTTGACCCGATGAGATAAATCAGTTCTATTGTCATCTAGGTGGTGAACATTTTCATCTTTAAGAATGTTTCCAAAATGTGGAGGGAAAGAAATTCGAAGAATTAAGTTTAACTTGTACAATAAAGATTTTGAATTTGATGATGAGAACTGTAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTGTGTGTGTGTGTGTGTGTGTTTGAAATACAAGATGAACAATACTTTGCTGCATATCGATATGTAGGGATCTTCCTACATACCCCATTAAAATCTTGACGACTAAGAATGAGAAAGGTAGAAAATGAGAATCTCTCCTAGTTGTCAAACATTTTAATGTTGGTATGTAGGAAGATCCCTACATATCGGTATGTAGCCAAGTATTTTTCATTCAAGATTCATATGACTATATGAGAACTAAATGTCAATTACCATGTTCTTCTTCCTCCTCATTCACCCTTTTGTACTTCAATAAATTGTTTTATTGTTTCTGCTCACTCTTAATGATTCACAGGTTTATATGTTGAAAGTAGAAGGTATTGCATTCCGCTTTTTGCCAGATCCTGTTCAGATAAAGAATGCATTAGAGGCAAGTTTCATTGGCTCGTGTTAGAGAATATTATATGCCATGCTATATGGAATTCACTCATATGGTTTCTAGATTTTAACTTCATAGAAATAGCAAGACTCTGATAAGAGATGCTGCGTTGATATCCATAGGTTAGTCTAGTGGTTAAGGGGCAAGTTAAAATGGTAAAATTAAAATGACTTTGGAGTTATGAGTCCAAATCTCGTGGTGACCACCTACTGAAGATGTTAAGGTCCTATGAGTTTTTTGACAAATGTCGTAGGTTCATATGGTTCTCACAGTCACAAAATTGAGCTGTGATAATATACAGATATATAGAAGCTGGGTTTAACTTGCTCTTGACAATATTTAAAGATGAGAGATGCCTTGGCAATTCAATTCAAGATTAGTGATGTTATATGTTATTGTCGGTTGAAATGTAGCAAAGCATTTACAAACCTCAAACATTTTGTATACATGCTGTATGTCTGTTAACGTATGAGAACTGAACTCATAATTGTATCTCTTTGTTTATAGCTCAAAGCTTCGGATACCAGAAGCAGTTTTGATGGAGTTCCTGTTTTTCAGGTATGATGGTCCACACCTAATTAAATGTTTTTTTTTAATGAAGGCAAAAATTTGCATTGTGAAAATTACAGACAGATCCATATATTAGATCACTGGATGCTTTCCAAATTTCTAATGCAGAGCGTAAACAGTTCTCAATCATGATTGTCAGTGTGCATACTTCAAGCAAGATACAAGCATGATAATAATTGGGTCTAAAGTTCTTATAAAATTATTTCTATGTACAATTGAGTAGACACTTTTTATATTAACTTAAATTTTTTTTTACAGTCTGACCTTCTGATCGTGAAAAAGAAGAACAAGCGTTATTGTCCTATTTACTTTACAAAGGTCTGTATAATTTCTGAGAAACTATGGATGCATCTAACCATTCAGAATGTGCTTTGATTAGGTGGTGTTATAACCCCAGCATCCTGTGATACTTGTTTTTTTCCTTGAAATATAGGAAGATATAGAAAAGGAACTGTCGAAAGTCTCAAAGGCATCGAGAGGATTAGGAACTTCTCAACATATCATGGTAGGATTTCTATCCTTTTCTTTGGTATATTCTACTCATTGAATGGGTTAAACTTTGTGGCTCGATTCAGCACTCCCTACAATATGGTGTTTATATTTTTCTTTCCTTTGCATTTTGGTACATTACTGCTTGTTACATTTTAGAAGTGATCTGTCACTGTCAGTGTCAGATATGCTACTCTCTCTTAAATGAAAGATTGATTTTGTTAATTTTCCCATTGTAGTTTACTGTTTAAAGTGCTTTTTTGCCATAAGCAATTTGAGAAATGTTAACAGTCCTATTCAGGCAGAATGTCTGAAATTACTATCTTCTTTCTTGTGAAAAAAAATATCTGTTCAGTTAGTCCTCGTTTATGTTGTCTCTTCCCTTCATTTAACCGGAATTGTAATACGACAGGTTGGTAGTTTGGAAGATGTTCTTAAGAAAATGGAGGTAAGGTTTCTTGATCTCAAGTAGCAATATCTTTTAGAGCATAGAAATTGCCCTCCATCTTAGTTTTCTTGATCAATTACAGTTGAATGAGAAGAATTCAGCCTGGGAAGATCTAATTTTTATTCCACCTGGCAAAAGCCACTCTCAACACATTCAAGAAGTGGGCAAAGCATGA ATGGAGACCCCGAAACCCTACCCGCATTCGAATCCTCTGCTATCCATTCCCTCTTTCATCCACCATCACTGTTCCAGACTCGGAGCTGAGCTCTCCAATCGTCTCGAAGAGACAAAGCGCTTTGCCGGAACCTTCGCCAGAAGATGGCCGGCGGAGGCTAATTGGCGATCCTTTACTACACCAGCTTTCGCGTCCCTCGCGCAGCACACTAATTCCTTGGCTGCCACTCTGAGCTCCGACCAAGTGGCTAAGTCTCTCGTCGGCACGGCGGTCTACACTGTTAGCAATTCGAACAACGAGTTTGTGCTCATTTCTGATCCCAATGGAGTCAAGTCAATTGGGTTGCTATGCTTCCGCAAGGAAGATGCCGAGACCTTTTTGGCTCAGGTCCGATCGAGGAAAAGAGAACTGAGAAGTAATGCGAAGGTTGTCCCAATTACCCTTGACCAGGTTTATATGTTGAAAGTAGAAGGTATTGCATTCCGCTTTTTGCCAGATCCTGTTCAGATAAAGAATGCATTAGAGCTCAAAGCTTCGGATACCAGAAGCAGTTTTGATGGAGTTCCTGTTTTTCAGTCTGACCTTCTGATCGTGAAAAAGAAGAACAAGCGTTATTGTCCTATTTACTTTACAAAGGAAGATATAGAAAAGGAACTGTCGAAAGTCTCAAAGGCATCGAGAGGATTAGGAACTTCTCAACATATCATGGTTGGTAGTTTGGAAGATGTTCTTAAGAAAATGGAGTTGAATGAGAAGAATTCAGCCTGGGAAGATCTAATTTTTATTCCACCTGGCAAAAGCCACTCTCAACACATTCAAGAAGTGGGCAAAGCATGA ATGGAGACCCCGAAACCCTACCCGCATTCGAATCCTCTGCTATCCATTCCCTCTTTCATCCACCATCACTGTTCCAGACTCGGAGCTGAGCTCTCCAATCGTCTCGAAGAGACAAAGCGCTTTGCCGGAACCTTCGCCAGAAGATGGCCGGCGGAGGCTAATTGGCGATCCTTTACTACACCAGCTTTCGCGTCCCTCGCGCAGCACACTAATTCCTTGGCTGCCACTCTGAGCTCCGACCAAGTGGCTAAGTCTCTCGTCGGCACGGCGGTCTACACTGTTAGCAATTCGAACAACGAGTTTGTGCTCATTTCTGATCCCAATGGAGTCAAGTCAATTGGGTTGCTATGCTTCCGCAAGGAAGATGCCGAGACCTTTTTGGCTCAGGTCCGATCGAGGAAAAGAGAACTGAGAAGTAATGCGAAGGTTGTCCCAATTACCCTTGACCAGGTTTATATGTTGAAAGTAGAAGGTATTGCATTCCGCTTTTTGCCAGATCCTGTTCAGATAAAGAATGCATTAGAGCTCAAAGCTTCGGATACCAGAAGCAGTTTTGATGGAGTTCCTGTTTTTCAGTCTGACCTTCTGATCGTGAAAAAGAAGAACAAGCGTTATTGTCCTATTTACTTTACAAAGGAAGATATAGAAAAGGAACTGTCGAAAGTCTCAAAGGCATCGAGAGGATTAGGAACTTCTCAACATATCATGGTTGGTAGTTTGGAAGATGTTCTTAAGAAAATGGAGTTGAATGAGAAGAATTCAGCCTGGGAAGATCTAATTTTTATTCCACCTGGCAAAAGCCACTCTCAACACATTCAAGAAGTGGGCAAAGCATGA METPKPYPHSNPLLSIPSFIHHHCSRLGAELSNRLEETKRFAGTFARRWPAEANWRSFTTPAFASLAQHTNSLAATLSSDQVAKSLVGTAVYTVSNSNNEFVLISDPNGVKSIGLLCFRKEDAETFLAQVRSRKRELRSNAKVVPITLDQVYMLKVEGIAFRFLPDPVQIKNALELKASDTRSSFDGVPVFQSDLLIVKKKNKRYCPIYFTKEDIEKELSKVSKASRGLGTSQHIMVGSLEDVLKKMELNEKNSAWEDLIFIPPGKSHSQHIQEVGKA Homology
BLAST of Lag0036943 vs. NCBI nr
Match: XP_038899812.1 (protein TIC 22, chloroplastic [Benincasa hispida]) HSP 1 Score: 529.6 bits (1363), Expect = 1.6e-146 Identity = 266/278 (95.68%), Postives = 272/278 (97.84%), Query Frame = 0
BLAST of Lag0036943 vs. NCBI nr
Match: XP_023525963.1 (protein TIC 22, chloroplastic isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 525.0 bits (1351), Expect = 3.9e-145 Identity = 263/278 (94.60%), Postives = 270/278 (97.12%), Query Frame = 0
BLAST of Lag0036943 vs. NCBI nr
Match: XP_022937273.1 (protein TIC 22, chloroplastic-like [Cucurbita moschata]) HSP 1 Score: 523.5 bits (1347), Expect = 1.1e-144 Identity = 262/278 (94.24%), Postives = 271/278 (97.48%), Query Frame = 0
BLAST of Lag0036943 vs. NCBI nr
Match: XP_022982278.1 (protein TIC 22, chloroplastic isoform X1 [Cucurbita maxima]) HSP 1 Score: 523.5 bits (1347), Expect = 1.1e-144 Identity = 262/278 (94.24%), Postives = 269/278 (96.76%), Query Frame = 0
BLAST of Lag0036943 vs. NCBI nr
Match: XP_023536488.1 (protein TIC 22, chloroplastic-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 521.5 bits (1342), Expect = 4.3e-144 Identity = 261/278 (93.88%), Postives = 270/278 (97.12%), Query Frame = 0
BLAST of Lag0036943 vs. ExPASy Swiss-Prot
Match: Q9ZST9 (Protein TIC 22, chloroplastic OS=Pisum sativum OX=3888 GN=TIC22 PE=1 SV=1) HSP 1 Score: 355.1 bits (910), Expect = 7.0e-97 Identity = 187/265 (70.57%), Postives = 214/265 (80.75%), Query Frame = 0
BLAST of Lag0036943 vs. ExPASy Swiss-Prot
Match: Q9SZB2 (Protein TIC 22, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TIC22 PE=1 SV=1) HSP 1 Score: 352.4 bits (903), Expect = 4.5e-96 Identity = 178/268 (66.42%), Postives = 221/268 (82.46%), Query Frame = 0
BLAST of Lag0036943 vs. ExPASy Swiss-Prot
Match: F4J469 (Protein TIC 22-like, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TIC22L PE=3 SV=1) HSP 1 Score: 153.3 bits (386), Expect = 4.0e-36 Identity = 84/195 (43.08%), Postives = 120/195 (61.54%), Query Frame = 0
BLAST of Lag0036943 vs. ExPASy TrEMBL
Match: A0A6J1J4F6 (protein TIC 22, chloroplastic isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111481156 PE=4 SV=1) HSP 1 Score: 523.5 bits (1347), Expect = 5.5e-145 Identity = 262/278 (94.24%), Postives = 269/278 (96.76%), Query Frame = 0
BLAST of Lag0036943 vs. ExPASy TrEMBL
Match: A0A6J1FFN8 (protein TIC 22, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111443609 PE=4 SV=1) HSP 1 Score: 523.5 bits (1347), Expect = 5.5e-145 Identity = 262/278 (94.24%), Postives = 271/278 (97.48%), Query Frame = 0
BLAST of Lag0036943 vs. ExPASy TrEMBL
Match: A0A6J1CN57 (protein TIC 22, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111012654 PE=4 SV=1) HSP 1 Score: 520.0 bits (1338), Expect = 6.1e-144 Identity = 261/278 (93.88%), Postives = 267/278 (96.04%), Query Frame = 0
BLAST of Lag0036943 vs. ExPASy TrEMBL
Match: A0A6J1IIY6 (protein TIC 22, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111476704 PE=4 SV=1) HSP 1 Score: 517.3 bits (1331), Expect = 3.9e-143 Identity = 259/278 (93.17%), Postives = 269/278 (96.76%), Query Frame = 0
BLAST of Lag0036943 vs. ExPASy TrEMBL
Match: A0A5D3D9N1 (Protein TIC 22 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G003450 PE=4 SV=1) HSP 1 Score: 511.9 bits (1317), Expect = 1.7e-141 Identity = 255/278 (91.73%), Postives = 268/278 (96.40%), Query Frame = 0
BLAST of Lag0036943 vs. TAIR 10
Match: AT4G33350.1 (Tic22-like family protein ) HSP 1 Score: 352.4 bits (903), Expect = 3.2e-97 Identity = 178/268 (66.42%), Postives = 221/268 (82.46%), Query Frame = 0
BLAST of Lag0036943 vs. TAIR 10
Match: AT4G33350.2 (Tic22-like family protein ) HSP 1 Score: 305.1 bits (780), Expect = 5.9e-83 Identity = 160/268 (59.70%), Postives = 198/268 (73.88%), Query Frame = 0
BLAST of Lag0036943 vs. TAIR 10
Match: AT3G23710.1 (Tic22-like family protein ) HSP 1 Score: 153.3 bits (386), Expect = 2.9e-37 Identity = 84/195 (43.08%), Postives = 120/195 (61.54%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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