Lag0035669 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0035669
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	protein MON2 homolog isoform X1
Location	chr3: 26678874 .. 26680219 (-)
RNA-Seq Expression	Lag0035669
Synteny	Lag0035669

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGTTATTAAGGTATTGCACCAACATTAATATAATTAATTTGGTAATGCTAATATTGATCTCGATTCATTTTATCTTCAAAATAGATTAAAAGTCAATACTAAAAAAATATGCATTCTAAATATAATATAAAAAAGTAAAATCAAAATTTGAATGAAAAAGATGATTAAAATTTGATCCAGACATAAAAATTAAAAGTATAAAAAATATACTGTTAATTTTTCTAAAGATAGAGATAATTTATTGTACTATATTTATTGAATTAAAAATTACACTATAATATTACTTAAAAAAATTACACTATAATATACAAAAAATGTGCATTTTTAATCTTAAACAAGTGGACATCAAATAAATAAATATATATGTGTGTGTGTTTAAGTTAAATATATATAAAAAATATTGCAAAGAAAATGAAACACAAAATAAAACCAAATACAAATTATCTCCATCTTTATAAAGTTTACTTATGTCCTCCTACAGGGAGTCTCTTTGTAACTTTTAACTGATCTAATGAATGTCATTTCTTCATGTTTTTTCTCTTAATTTTTTATTTGTTGCTTGTAGGTTCATTTTGTCAAATTATGTTGCTGTTTTCAGGATATTAGTTCCATATGAGCAGGTAAACTATGGCTTACCTATGGAAACTCTCTTTTGGCTTTTATCTGTGTTTTGTTTTTGACAAAAGTTTTAAAATTGAAATGATTGCTTAAAAATTTAACAGGTTTTGCGCCATCAGATATGTTCTCTTCTCATGACATCACTTCGTACAAATGCTGAGGTGATTGATTTGGAAAATCTGTTGACTAAATGTTTAGCTTCGATAACCATGCTTATTGAGATCTTGGTAACAAATTGGCTTCCTTTTGCCCCATTTTGATGTCATGTTAGCTTGAAGGGGAAGCGGGGGAGCCTTATTTCCGTCGCATAGTCTTGCGGTCAGTTGCTCATATTATCAGACTATATAGTACATCCCTCATCACTGAATGTGAGGTCTGTTCTATGAGAATAAACTTTTTGATTGTGACTTGACAATTTGGATCATGACCTTTATTAATAGTTGTTTTGCCATTGTTTGACATCCTCAACTTTTGGTATACGTATATCCATCCTTAATTAGTTCACAAATTTAAGTACCAAGACTTGAATGTTTCATATGTATGATCTTCTGATATTTTTCTGGTATAAACACTTGAAGCAATAACCTAAGCATCTTGATAGGAAGAAACAGCACCAACGATATTTCTATGCCTTGTGGAACATTTGGCTAGAATGAAATTTGAGAGCTTTTATGGCTGTAGTATAGTTTCTTCTAAGCAACTTTTTGAACTCTGTGCACCTTAA

mRNA sequence

ATGGTGTTATTAAGGTTCATTTTGTCAAATTATGTTGCTGTTTTCAGGATATTAGTTCCATATGAGCAGGTTTTGCGCCATCAGATATGTTCTCTTCTCATGACATCACTTCGTACAAATGCTGAGCTTGAAGGGGAAGCGGGGGAGCCTTATTTCCGTCGCATAGTCTTGCGGTCAGTTGCTCATATTATCAGACTATATAGTACATCCCTCATCACTGAATGTGAGGAAGAAACAGCACCAACGATATTTCTATGCCTTGTGGAACATTTGGCTAGAATGAAATTTGAGAGCTTTTATGGCTGTAGTATAGTTTCTTCTAAGCAACTTTTTGAACTCTGTGCACCTTAA

Coding sequence (CDS)

ATGGTGTTATTAAGGTTCATTTTGTCAAATTATGTTGCTGTTTTCAGGATATTAGTTCCATATGAGCAGGTTTTGCGCCATCAGATATGTTCTCTTCTCATGACATCACTTCGTACAAATGCTGAGCTTGAAGGGGAAGCGGGGGAGCCTTATTTCCGTCGCATAGTCTTGCGGTCAGTTGCTCATATTATCAGACTATATAGTACATCCCTCATCACTGAATGTGAGGAAGAAACAGCACCAACGATATTTCTATGCCTTGTGGAACATTTGGCTAGAATGAAATTTGAGAGCTTTTATGGCTGTAGTATAGTTTCTTCTAAGCAACTTTTTGAACTCTGTGCACCTTAA

Protein sequence

MVLLRFILSNYVAVFRILVPYEQVLRHQICSLLMTSLRTNAELEGEAGEPYFRRIVLRSVAHIIRLYSTSLITECEEETAPTIFLCLVEHLARMKFESFYGCSIVSSKQLFELCAP

Homology

[Close]

BLAST of Lag0035669 vs. NCBI nr
Match: XP_022155396.1 (protein MON2 homolog isoform X3 [Momordica charantia])

HSP 1 Score: 141.4 bits (355), Expect = 5.1e-30
Identity = 72/74 (97.30%), Postives = 73/74 (98.65%), Query Frame = 0


Query: 3   LLRFILSNYVAVFRILVPYEQVLRHQICSLLMTSLRTNAELEGEAGEPYFRRIVLRSVAH 62
           +L FILSNYVAVFRILVPYEQVLRHQICSLLMTSLRTNAELEGEAGEPYFRRIVLRSVAH
Sbjct: 261 ILEFILSNYVAVFRILVPYEQVLRHQICSLLMTSLRTNAELEGEAGEPYFRRIVLRSVAH 320

Query: 63  IIRLYSTSLITECE 77
           IIRLYSTSLITECE
Sbjct: 321 IIRLYSTSLITECE 334

[Close]

BLAST of Lag0035669 vs. NCBI nr
Match: XP_022155395.1 (protein MON2 homolog isoform X2 [Momordica charantia])

HSP 1 Score: 141.4 bits (355), Expect = 5.1e-30
Identity = 72/74 (97.30%), Postives = 73/74 (98.65%), Query Frame = 0


Query: 3   LLRFILSNYVAVFRILVPYEQVLRHQICSLLMTSLRTNAELEGEAGEPYFRRIVLRSVAH 62
           +L FILSNYVAVFRILVPYEQVLRHQICSLLMTSLRTNAELEGEAGEPYFRRIVLRSVAH
Sbjct: 261 ILEFILSNYVAVFRILVPYEQVLRHQICSLLMTSLRTNAELEGEAGEPYFRRIVLRSVAH 320

Query: 63  IIRLYSTSLITECE 77
           IIRLYSTSLITECE
Sbjct: 321 IIRLYSTSLITECE 334

[Close]

BLAST of Lag0035669 vs. NCBI nr
Match: XP_022155397.1 (protein MON2 homolog isoform X4 [Momordica charantia])

HSP 1 Score: 141.4 bits (355), Expect = 5.1e-30
Identity = 72/74 (97.30%), Postives = 73/74 (98.65%), Query Frame = 0


Query: 3   LLRFILSNYVAVFRILVPYEQVLRHQICSLLMTSLRTNAELEGEAGEPYFRRIVLRSVAH 62
           +L FILSNYVAVFRILVPYEQVLRHQICSLLMTSLRTNAELEGEAGEPYFRRIVLRSVAH
Sbjct: 261 ILEFILSNYVAVFRILVPYEQVLRHQICSLLMTSLRTNAELEGEAGEPYFRRIVLRSVAH 320

Query: 63  IIRLYSTSLITECE 77
           IIRLYSTSLITECE
Sbjct: 321 IIRLYSTSLITECE 334

[Close]

BLAST of Lag0035669 vs. NCBI nr
Match: XP_022155394.1 (protein MON2 homolog isoform X1 [Momordica charantia])

HSP 1 Score: 141.4 bits (355), Expect = 5.1e-30
Identity = 72/74 (97.30%), Postives = 73/74 (98.65%), Query Frame = 0


Query: 3   LLRFILSNYVAVFRILVPYEQVLRHQICSLLMTSLRTNAELEGEAGEPYFRRIVLRSVAH 62
           +L FILSNYVAVFRILVPYEQVLRHQICSLLMTSLRTNAELEGEAGEPYFRRIVLRSVAH
Sbjct: 261 ILEFILSNYVAVFRILVPYEQVLRHQICSLLMTSLRTNAELEGEAGEPYFRRIVLRSVAH 320

Query: 63  IIRLYSTSLITECE 77
           IIRLYSTSLITECE
Sbjct: 321 IIRLYSTSLITECE 334

[Close]

BLAST of Lag0035669 vs. NCBI nr
Match: KAG7020887.1 (Protein MON2-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 140.6 bits (353), Expect = 8.6e-30
Identity = 71/74 (95.95%), Postives = 73/74 (98.65%), Query Frame = 0


Query: 3   LLRFILSNYVAVFRILVPYEQVLRHQICSLLMTSLRTNAELEGEAGEPYFRRIVLRSVAH 62
           +L FILSNYVAVFRILVPYEQVLRHQICSLLMTSLRTNAE+EGEAGEPYFRRIVLRSVAH
Sbjct: 260 ILEFILSNYVAVFRILVPYEQVLRHQICSLLMTSLRTNAEIEGEAGEPYFRRIVLRSVAH 319

Query: 63  IIRLYSTSLITECE 77
           IIRLYSTSLITECE
Sbjct: 320 IIRLYSTSLITECE 333

The following BLAST results are available for this feature:

BLAST of Lag0035669 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022155396.1	5.1e-30	97.30	protein MON2 homolog isoform X3 [Momordica charantia]	[more]
XP_022155395.1	5.1e-30	97.30	protein MON2 homolog isoform X2 [Momordica charantia]	[more]
XP_022155397.1	5.1e-30	97.30	protein MON2 homolog isoform X4 [Momordica charantia]	[more]
XP_022155394.1	5.1e-30	97.30	protein MON2 homolog isoform X1 [Momordica charantia]	[more]
KAG7020887.1	8.6e-30	95.95	Protein MON2-like protein [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of Lag0035669 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR032691	Guanine nucleotide exchange factor, N-terminal	PFAM	PF12783	Sec7_N	coord: 3..76 e-value: 3.1E-7 score: 30.5
IPR026829	Protein Mon2-like	PANTHER	PTHR10663:SF333	PROTEIN MON2 HOMOLOG	coord: 3..91
None	No IPR available	PANTHER	PTHR10663	GUANYL-NUCLEOTIDE EXCHANGE FACTOR	coord: 3..91

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0035669.1	Lag0035669.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015031	protein transport
cellular_component	GO:0005737	cytoplasm