Lag0035661 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0035661
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Reverse transcriptase
Location	chr3: 26538702 .. 26543713 (+)
RNA-Seq Expression	Lag0035661
Synteny	Lag0035661

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGGAAGTAAGTTGTATTCTTGGAAAGCCTTTTCCTAGGGTTTTTCTATTAAGAAAAAGAACGAAAATAAAGAAAAGAAAAGAATTAAGGAAAAGGAAAAAGGCCAAAACCTCTATCTTCCCTTCATTCTTTCATGGAAGCCACCAACCCCCCTCTCGATTTCATCTTGCCGAAAGCCCACCAGCCACTGTCGCTGCCCACCAGCTGTCGTCTATAGGAGCTTCCGTTGCCGTCGTGTTGTCGTTCCCACCAGTTGTTCGTCACAACTTGAGCACGCTGCAACGCATCATGCGATTTCCCTCGCCGCCTGCTCGAGCCACTGCCGTTGCACGCTGCTCTCTCTCCCGCTCCGTCCGTGCATTTTTCTCCCTCTCAGTGGGTCTGTCCGTGGAGATTTTTCTCTCCCCTTGTGTTCGCGACGCCACCATTTCTCTCCTCCATCCCGGTGTCGCAATCTCCTTGAGGAATCGGCGTAAGTTTCCCTTCTTTGATTTCGCTTGGTTAAGATTCAAGTATTTGGGTCTAAGTTCTGATCTGCAGTACCGTCTAGGAAGCATTTGGCCTCGAATTTGCAGCATTCCTTCGGTGTCTTTTGGAAACTCTAGTAAATGTAGCTCGGCCCATTGAGTGTTTGCTTCAAATCTTGGTTACCCAAGCCACAACGACTTCTAAATTGCAGGTTTTGGGCCATTTGCAGTCACTGTACAATGCTTAATCGAGCTTGTTTGGTGTTGATCGGTAAGTTTCTGCGCCCTAAAACCTTTCGTAATAGTCGTAGTCAGCTTTAAAGTAGCTGTTAACCATTGGATGTCCTTTAGTTTTAGTTTCGAGTCAATTTGGATCTCGAACAACGTTAATTAAGGATTTTGGTGCTGGTCGACAAATTCCAACAAGCAGGTTGGCTCGTTTATGCAATTCGGTAAGGTTTCCAATGCCTTTAAGCCTTTTAAATGCCCTTCTTAATGCTGAAAATCGATTCCTTATAGTAGATAAGTCTTTTAGTAGCTGGAATCATTTTAGAGCATTCTCGAGCACATTAAGCCATTTACCAAGGACTTAAGGTTGATCTTGAGTAAGTTTTCTCCCTTAGACGAAGCTAGCTAAATTATGTTTTCCTAATTGCTTAGGAGTTTATTTGGATCATTTAGAATTGATTAAGGGTGTTATAAGGAGCCTTCAAAGTTCTCTAGAGCATTTCTATGTAATGTAAGCAGTTTCCACTTGCTACTCTATGTAATGTAAGCAGTTTCCACTTGTTAGATTTTGTTTGATTGCCTGTAGCATGTGTGTGGTGTTACTTGCCTTACTTATATACTTGTGTGAAACACGATTTGCTATGTTGATAATTGCGGTTTTGCATGAGTTGAACATGTTCTGTTGTATTGCTTGAGATAAGCATGTTCTGTTGTGTTTAAGCATGAGGAGGTGTCGCATTTTAGCATGATGGGATGTCGTGTTAAGTAGGCTAGCATGTTGTCACGGGAAGTGTAGCAAGAGTCTAGCGGTTGCGTTACATGACGCGTAATTCATGTGATGGTGTGCAGCGTGGCGCGTAATTAACGTGTTTGGTTTTGCGTAGCATGATGCGTAATGCATGTGTTCGATTTTGCGTAGCATGACGCGTAATGCATGCGTTTGTTTAGCCTAGCATGGTGCAGAAATCATGTGGGCTAGGTGTGCAGCATGACGCATAATTCACGTGTTGGTTTGCGCAACATGACACGTAATTCATGCGTTAGGTGCAGAGCATGATGCATAAATCATGTGATGTCTAGTAGGGTGTGGGTGCATAGTGTGGAAAACATGTGCATGGTGGATATTTATTGCTTTGTTAGCATCTTGGGTTTTTTTTTGCTTTTTAAGCATGTTTGTGTGCGTGAAGCATGTTGTTTGACATCGGTTGTTGCTTGTGACCTAAGATGATCCAAGCCTTGGTTGCGAGGAGGAGAACTATGAGGAAGATTCCTAGGATGTTAGAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAATATGCTTGGATAGGCTAGTTTAGTGTTGGTTTGGTCGAAACATTGTTTGTCATGGTGAGAGATTCACCTAGATGATTTGGTTTCCTGTTTTAGGATCTTGTGGTTATTGCTGTTGTTAGCTTGGTGGAATAATATAAATTGGATTAGCTAGAAGGTTGCTAATTGAGTTGCTAGACTTAATAAAGAATTGATAACTCAACCTGTTGATTGGTTTGGTTTAATAATCTTGTGTGTCTGATGCTATGAGACTTGACTCGTATAGTGAAGTTAGGTTGTGAAAACTACTGGTAGTTTGGTGGAGTTTGGTTTGTGAATGTTTGAGAGTGTTGGATTTATTTATCAAATGTTAAAAATTTTGGGTTAACCAGTTTTACGTCCTTATGCTGCCGAAATTTTCGATGCATTCGATTTAAAATAGTTCAGTTTTGTGTTTAAGGGTTTAAAATTTTGAAGTAGCGTTGTTAGGCTAGTGGTTGAAAAACCTGGAGCGTTACAGTTGGTATCGGAGCAGAGTTGTTCCTGTAGACTGACCTAGGTAGCCTAGGTTGTTGAGTTGTGTGTGTTTGAGGTTTTTCTCATTCTCCTCTCCATCACCAGGTATGGAATCATCAATATTTAATTGTTTATTGATATATTATTGGATGTATGAGTGGTCTGTTTGCCTAATATTAGCTTGCTTGTTACATGCTTTACATGTCTTTTTCAAGCATGATTGTTTTCCTTGGTTGCTTGATCTGGTAGAAGCTAGGCTTAGGATGTTCCCTTTAAGTGGCTAGATAGCTTGTATTGATTGCATGGCTTTTAAGTGGTAGTGGGATTAGTTTGTTGCCTAGACTCAGGTTAGAGCTTGTATCCTAGTTTGTAATCCATTCTTTGACCTTAATACCCTATCTATTCAGTCGATGGTTCGTGGCCATGGACCCAGAATCCCAGCTAATAGGTAGGAGGATCAGGTCGACGATGTCCATGCTCAGCAGGAGATTAACCCGCCGATTCCTCCTGATCAGCACGAAGTTGACCCTCCGCCCCCTTCTAGGCAGCAGAAGGTTGTTCCTCAAGTGCCGCATGCAGCCCCGCATATGTTGATTTCTACTAAAGCCATGTAGACCATGTTCGAAAATGTGGCTCAACCGAACGTTTGACAGTCCTGCCAGCCAAATTGGACAGTCGAGGACCCGATAGTGTCCCAATTCATTCTCGACTTCAAGCAGTATGGTCCTCCCTCTTTCGACGGGCGTTCAGATAACCCGTTGGCAGTCAAGTGTTGGATTGACAACCTCGAAGCTATGTTTGACTACATGAACTGTGATGACTGCCTGAAAGCTCGAGGCGTAGTTTTCATGTTGAGGGGCGAAGCTCGTAATTGGTGGAAGTCAGTAGCAGTCGTCGTGGATCATGCTAATGAACCAGTTTCGTGGGAGAGGTTCAAAGATCTTCTTTACGATTATTACTTCCTCGAGACTGTCAGAGATGACAAAGAGACAGAGTTCTTGCATTTAACTCAGGGAACCATGTCCGTGATTTAGTATGAGCGGAAGTTCACTAAGCTGTCACGTTTTGCTCCTGACATAGTCAGCACATCGAAGCGGAAGATTAAGAGGTTCATCAAGGCCTCCGGGAAGAAATTTGTGGTACAATTTTCCTGAATGCACCTACGACCTTTGCTGCAGCCCTCCGTGGAGTGTTGGTCATGGATAAAAATTTGGCCAAGAAGGTGCAATCTCGTTGGGAGGTCGGTTCGTCTTCTGGGGTTAAAAGAAAGCCCCCACCAACTCAAGCGAGACCACCACAGAAGGGCTTGGGCTTATCTAGCGAGTGTGGTAGATACCAGCAAGGAAGCCTGATGCGCAATTTGCTTACCGCAAGTGTACGGGTGAAGTAATAATATAGTGTTTTCGTGTAAAACGAGTGTCGTCCTCTGGATTGGTTTTCTAGCAAACGAGTGTCGTCCTCAGGTTAGAGCTTGTATCCTAGTTTGTAATCCATTCTTTGACCTTAATACCCTATCTATTCAGTCGATGGTTCGTGGCCATGGACCCAGAATCCCAGCTAATAGGTAGGAGGATCAGGTCGACGATGTCCATGCTCAGCAGGAGATTAACCCGCCGTTTCCTCCTGATCAGCACGAAGTTGACCCTCCGCCCCCTTCTAGGCAGCAGAAGGTTGTTCCTCCAGTGCCGCATGCAGCCCCGCATATGTTGATTTCTACTAAAGCCATGTAGACCATGTTCGAAAATGTGGCTCAACCGAACGTTTGACAGTCCTGCCAGCCAAATTAGACAGTCGAGGACCCGATAGTGTCCCAATTCATTCGCGACTTCAAGCAGTATGGTCCTCCCTCTTTCGACGGGCGTTCAGATAACCCGTTGGCAGTCAAGCGTTGGATTGACAACCTCGAAGCTATGTTTGACTACATGAACTGTGATGACTGCCTGAAAGCTCGAGGCGTAGTTTTCATGTTGAGGGGCGAAGCTCGTAATTGGTGGAAGTCAGTAGCAGTCGTCGAGGATCATGCTAATGAACCAGTTTCGTGGGAGAGGTTCAAAGATCTTCTTTACGATTATTACTTCCTCGAGACTGTCAGAGATGACAAAGAGACAGAGTTCTTGCATTTAACTCAGGGAACCATGTCCGTGATTTAGTATGAGCGGAAGTTCACTAAGCTGTCACGTTTTGCTCCTGACATAGTCAACACATCGAAGCGGAAGATTAAGAGGTTCATCAACGCCTCCGAGAAGAAATTTGTGGTACAATTTTCCTGAATGCACCTACGACCTTTGCTGCAGCCCTCCGTGGAGTGTTGGTCATGGATAAAAATTTGGCCAAGAAGGTGCAATCTCGTTGGGAGGTCGGTTCGTCTTCTGGGGTTAAAAGAAAGCCCCCACCAACTCAAGCGAGACCATCACAGAAGGGCTTGGGCTTATCTAGCGAGTGTGGTAGATACCAGCAAGGAAGCCTGATGCGCAATTTGCTTACCGCAAGTGTACGGGTGAAGTAA

mRNA sequence

ATGGGGGAAGTAAGTTGTATTCTTGGAAAGCCTTTTCCTAGGGTTTTTCTATTAAGAAAAAGAACGAAAATAAAGAAAAGAAAAGAATTAAGGAAAAGGAAAAAGGCCAAAACCTCTATCTTCCCTTCATTCTTTCATGGAAGCCACCAACCCCCCTCTCGATTTCATCTTGCCGAAAGCCCACCAGCCACTGTCGCTGCCCACCAGCTGTCGTCTATAGGAGCTTCCGTTGCCGTCGTGTTGTCGTTCCCACCAGTTGTTCGTCACAACTTGAGCACGCTGCAACGCATCATGCGATTTCCCTCGCCGCCTGCTCGAGCCACTGCCGTTGCACGCTGCTCTCTCTCCCGCTCCGTCCGTGCATTTTTCTCCCTCTCAGTGGGTCTGTCCGTGGAGATTTTTCTCTCCCCTTGTGTTCGCGACGCCACCATTTCTCTCCTCCATCCCGGTGTCGCAATCTCCTTGAGGAATCGGCGTAAGTTTCCCTTCTTTGATTTCGCTTGGTTAAGATTCAAGTATTTGGGTCTAAGTTCTGATCTGCAGTACCGTCTAGGAAGCATTTGGCCTCGAATTTGCAGCATTCCTTCGGTGTCTTTTGGAAACTCTATTTTAGTTTCGAGTCAATTTGGATCTCGAACAACGTTAATTAAGGATTTTGGTGCTGGTCGACAAATTCCAACAAGCAGGTTGGCTCGTTTATGCAATTCGGAGGATCAGGTCGACGATGTCCATGCTCAGCAGGAGATTAACCCGCCGATTCCTCCTGATCAGCACGAAGTTGACCCTCCGCCCCCTTCTAGGCAGCAGAAGTCCTGCCAGCCAAATTGGACAGTCGAGGACCCGATAGTGTCCCAATTCATTCTCGACTTCAAGCAGTATGGTCCTCCCTCTTTCGACGGGCGTTCAGATAACCCGTTGGCAGTCAAGTGTTGGATTGACAACCTCGAAGCTATGTTTGACTACATGAACTGTGATGACTGCCTGAAAGCTCGAGGCGTAGTTTTCATGTTGAGGGGCGAAGCTCGTAATTGGTGGAAGTCAGTAGCAGTCGTCGTGGATCATGCTAATGAACCAGTTTCGTGGGAGAGGTTCAAAGATCTTCTTTACGATTATTACTTCCTCGAGACTGTCAGAGATGACAAAGAGACAGAGTTCTTGCATTTAACTCAGGGAACCATGTCCGTTCATCAAGGCCTCCGGGAAGAAATTTGTGGTACAATTTTCCTGAATGCACCTACGACCTTTGCTGCAGCCCTCCGTGGAGTGTTGGTCATGGATAAAAATTTGGCCAAGAAGGTGCAATCTCGTTGGGAGGTCGGTTCGTCTTCTGGGGTTAAAAGAAAGCCCCCACCAACTCAAGCGAGACCACCACAGAAGGGCTTGGGCTTATCTAGCGAGTGTGGTAGATACCAGCAAGGAAGCCTGATGCGCAATTTGCTTACCGCAAGTGAGGATCAGGTCGACGATGTCCATGCTCAGCAGGAGATTAACCCGCCGTTTCCTCCTGATCAGCACGAAGTTGACCCTCCGCCCCCTTCTAGGCAGCAGAAGACAGTCGAGGACCCGATAGTGTCCCAATTCATTCGCGACTTCAAGCAGTATGGTCCTCCCTCTTTCGACGGGCGTTCAGATAACCCGTTGGCAGTCAAGCGTTGGATTGACAACCTCGAAGCTATGTTTGACTACATGAACTGTGATGACTGCCTGAAAGCTCGAGGCGTAGTTTTCATGTTGAGGGGCGAAGCTCGTAATTGGTGGAAGTCAGTAGCAGTCGTCGAGGATCATGCTAATGAACCAGTTTCGTGGGAGAGGTTCAAAGATCTTCTTTACGATTATTACTTCCTCGAGACTGTCAGAGATGACAAAGAGACAGAGTTCTTGCATTTAACTCAGGGAACCATGTCCGTTCATCAACGCCTCCGAGAAGAAATTTGTGGTACAATTTTCCTGAATGCACCTACGACCTTTGCTGCAGCCCTCCGTGGAGTGTTGGTCATGGATAAAAATTTGGCCAAGAAGGTGCAATCTCGTTGGGAGGTCGGTTCGTCTTCTGGGGTTAAAAGAAAGCCCCCACCAACTCAAGCGAGACCATCACAGAAGGGCTTGGGCTTATCTAGCGAGTGTGGTAGATACCAGCAAGGAAGCCTGATGCGCAATTTGCTTACCGCAAGTGTACGGGTGAAGTAA

Coding sequence (CDS)

ATGGGGGAAGTAAGTTGTATTCTTGGAAAGCCTTTTCCTAGGGTTTTTCTATTAAGAAAAAGAACGAAAATAAAGAAAAGAAAAGAATTAAGGAAAAGGAAAAAGGCCAAAACCTCTATCTTCCCTTCATTCTTTCATGGAAGCCACCAACCCCCCTCTCGATTTCATCTTGCCGAAAGCCCACCAGCCACTGTCGCTGCCCACCAGCTGTCGTCTATAGGAGCTTCCGTTGCCGTCGTGTTGTCGTTCCCACCAGTTGTTCGTCACAACTTGAGCACGCTGCAACGCATCATGCGATTTCCCTCGCCGCCTGCTCGAGCCACTGCCGTTGCACGCTGCTCTCTCTCCCGCTCCGTCCGTGCATTTTTCTCCCTCTCAGTGGGTCTGTCCGTGGAGATTTTTCTCTCCCCTTGTGTTCGCGACGCCACCATTTCTCTCCTCCATCCCGGTGTCGCAATCTCCTTGAGGAATCGGCGTAAGTTTCCCTTCTTTGATTTCGCTTGGTTAAGATTCAAGTATTTGGGTCTAAGTTCTGATCTGCAGTACCGTCTAGGAAGCATTTGGCCTCGAATTTGCAGCATTCCTTCGGTGTCTTTTGGAAACTCTATTTTAGTTTCGAGTCAATTTGGATCTCGAACAACGTTAATTAAGGATTTTGGTGCTGGTCGACAAATTCCAACAAGCAGGTTGGCTCGTTTATGCAATTCGGAGGATCAGGTCGACGATGTCCATGCTCAGCAGGAGATTAACCCGCCGATTCCTCCTGATCAGCACGAAGTTGACCCTCCGCCCCCTTCTAGGCAGCAGAAGTCCTGCCAGCCAAATTGGACAGTCGAGGACCCGATAGTGTCCCAATTCATTCTCGACTTCAAGCAGTATGGTCCTCCCTCTTTCGACGGGCGTTCAGATAACCCGTTGGCAGTCAAGTGTTGGATTGACAACCTCGAAGCTATGTTTGACTACATGAACTGTGATGACTGCCTGAAAGCTCGAGGCGTAGTTTTCATGTTGAGGGGCGAAGCTCGTAATTGGTGGAAGTCAGTAGCAGTCGTCGTGGATCATGCTAATGAACCAGTTTCGTGGGAGAGGTTCAAAGATCTTCTTTACGATTATTACTTCCTCGAGACTGTCAGAGATGACAAAGAGACAGAGTTCTTGCATTTAACTCAGGGAACCATGTCCGTTCATCAAGGCCTCCGGGAAGAAATTTGTGGTACAATTTTCCTGAATGCACCTACGACCTTTGCTGCAGCCCTCCGTGGAGTGTTGGTCATGGATAAAAATTTGGCCAAGAAGGTGCAATCTCGTTGGGAGGTCGGTTCGTCTTCTGGGGTTAAAAGAAAGCCCCCACCAACTCAAGCGAGACCACCACAGAAGGGCTTGGGCTTATCTAGCGAGTGTGGTAGATACCAGCAAGGAAGCCTGATGCGCAATTTGCTTACCGCAAGTGAGGATCAGGTCGACGATGTCCATGCTCAGCAGGAGATTAACCCGCCGTTTCCTCCTGATCAGCACGAAGTTGACCCTCCGCCCCCTTCTAGGCAGCAGAAGACAGTCGAGGACCCGATAGTGTCCCAATTCATTCGCGACTTCAAGCAGTATGGTCCTCCCTCTTTCGACGGGCGTTCAGATAACCCGTTGGCAGTCAAGCGTTGGATTGACAACCTCGAAGCTATGTTTGACTACATGAACTGTGATGACTGCCTGAAAGCTCGAGGCGTAGTTTTCATGTTGAGGGGCGAAGCTCGTAATTGGTGGAAGTCAGTAGCAGTCGTCGAGGATCATGCTAATGAACCAGTTTCGTGGGAGAGGTTCAAAGATCTTCTTTACGATTATTACTTCCTCGAGACTGTCAGAGATGACAAAGAGACAGAGTTCTTGCATTTAACTCAGGGAACCATGTCCGTTCATCAACGCCTCCGAGAAGAAATTTGTGGTACAATTTTCCTGAATGCACCTACGACCTTTGCTGCAGCCCTCCGTGGAGTGTTGGTCATGGATAAAAATTTGGCCAAGAAGGTGCAATCTCGTTGGGAGGTCGGTTCGTCTTCTGGGGTTAAAAGAAAGCCCCCACCAACTCAAGCGAGACCATCACAGAAGGGCTTGGGCTTATCTAGCGAGTGTGGTAGATACCAGCAAGGAAGCCTGATGCGCAATTTGCTTACCGCAAGTGTACGGGTGAAGTAA

Protein sequence

MGEVSCILGKPFPRVFLLRKRTKIKKRKELRKRKKAKTSIFPSFFHGSHQPPSRFHLAESPPATVAAHQLSSIGASVAVVLSFPPVVRHNLSTLQRIMRFPSPPARATAVARCSLSRSVRAFFSLSVGLSVEIFLSPCVRDATISLLHPGVAISLRNRRKFPFFDFAWLRFKYLGLSSDLQYRLGSIWPRICSIPSVSFGNSILVSSQFGSRTTLIKDFGAGRQIPTSRLARLCNSEDQVDDVHAQQEINPPIPPDQHEVDPPPPSRQQKSCQPNWTVEDPIVSQFILDFKQYGPPSFDGRSDNPLAVKCWIDNLEAMFDYMNCDDCLKARGVVFMLRGEARNWWKSVAVVVDHANEPVSWERFKDLLYDYYFLETVRDDKETEFLHLTQGTMSVHQGLREEICGTIFLNAPTTFAAALRGVLVMDKNLAKKVQSRWEVGSSSGVKRKPPPTQARPPQKGLGLSSECGRYQQGSLMRNLLTASEDQVDDVHAQQEINPPFPPDQHEVDPPPPSRQQKTVEDPIVSQFIRDFKQYGPPSFDGRSDNPLAVKRWIDNLEAMFDYMNCDDCLKARGVVFMLRGEARNWWKSVAVVEDHANEPVSWERFKDLLYDYYFLETVRDDKETEFLHLTQGTMSVHQRLREEICGTIFLNAPTTFAAALRGVLVMDKNLAKKVQSRWEVGSSSGVKRKPPPTQARPSQKGLGLSSECGRYQQGSLMRNLLTASVRVK

Homology

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BLAST of Lag0035661 vs. NCBI nr
Match: XP_022155000.1 (uncharacterized protein LOC111022144 [Momordica charantia])

HSP 1 Score: 203.0 bits (515), Expect = 8.9e-48
Identity = 102/202 (50.50%), Postives = 126/202 (62.38%), Query Frame = 0


Query: 525 SQFIRDFKQYGPPSFDGRSDNPLAVKRWIDNLEAMFDYMNCDDCLKARGVVFMLRGEARN 584
           + FI+DFK+YGPP+FDG S+   A + WI  LEA + Y+ C+D  K +G VFMLRGEA N
Sbjct: 11  AHFIKDFKRYGPPTFDGESERATAAEEWIRELEAFYAYLGCEDQFKVKGAVFMLRGEALN 70

Query: 585 WWKSVAVVEDHANEPVSWERFKDLLYDYYFLETVRDDKETEFLHLTQGTMSVHQ------ 644
           WW S+A  EDHAN  + W RFKDLLYDYY+LETV+D KE EFLHL QGT+SV Q      
Sbjct: 71  WWDSIAAAEDHANVTIPWARFKDLLYDYYYLETVKDMKEAEFLHLVQGTLSVAQYERKFT 130

Query: 645 ----------------------RLREEICGTIFLNAPTTFAAALRGVLVMDKNLAKKVQS 699
                                  L + I G + L  P ++A A+RG L+MDK+++ K  S
Sbjct: 131 ELSRFALELILNAAMKIKRFVKGLSKGIRGPVDLQRPASYAEAVRGALIMDKDVSNKAPS 190

[Close]

BLAST of Lag0035661 vs. NCBI nr
Match: XP_022156326.1 (uncharacterized protein LOC111023247 [Momordica charantia])

HSP 1 Score: 203.0 bits (515), Expect = 8.9e-48
Identity = 109/225 (48.44%), Postives = 135/225 (60.00%), Query Frame = 0


Query: 499 PFPPDQHEVDPPPPSRQQKTVEDPIVSQFIRDFKQYGPPSFDGRSDNPLAVKRWIDNLEA 558
           P P     V  PPP        +   ++FI+DFK+YGPP+FDG S+   AV+ WI  LEA
Sbjct: 15  PAPGGVGGVQAPPPQHLHTPQSE---ARFIKDFKRYGPPTFDGESERATAVEEWIRELEA 74

Query: 559 MFDYMNCDDCLKARGVVFMLRGEARNWWKSVAVVEDHANEPVSWERFKDLLYDYYFLETV 618
           ++ Y+ C+D  K +G VFMLRGEA NWW SVA  ED+AN P+ W RFK+LLYDYY+ ETV
Sbjct: 75  LYAYLGCEDQFKVKGAVFMLRGEALNWWDSVAAAEDYANVPIPWARFKNLLYDYYYPETV 134

Query: 619 RDDKETEFLHLTQGTMSVHQ----------------------------RLREEICGTIFL 678
           +D KE EFLHL QGT+SV Q                             LR+ I G + L
Sbjct: 135 KDMKEAEFLHLVQGTLSVAQYERKFTELSRFALELIPTEALKIKRFVKGLRKGIRGPVDL 194

Query: 679 NAPTTFAAALRGVLVMDKNLAKKVQSRWEVGSSSGVKRKPPPTQA 696
             PTT+A A+RG LVMDK+++ K     EVGSSSGVKRK P T A
Sbjct: 195 QRPTTYAEAVRGALVMDKDVSNKASPLPEVGSSSGVKRKFPSTYA 236

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BLAST of Lag0035661 vs. NCBI nr
Match: XP_022151688.1 (uncharacterized protein LOC111019603 [Momordica charantia])

HSP 1 Score: 198.7 bits (504), Expect = 1.7e-46
Identity = 100/204 (49.02%), Postives = 131/204 (64.22%), Query Frame = 0


Query: 525 SQFIRDFKQYGPPSFDGRSDNPLAVKRWIDNLEAMFDYMNCDDCLKARGVVFMLRGEARN 584
           +QFIRDF++YGPP+F+G S+    V+ WI  LEA++ Y+ C D LK +G VFMLRGEA N
Sbjct: 64  AQFIRDFRRYGPPTFNGESEKATVVEEWIRELEALYTYLGCSDQLKVKGAVFMLRGEALN 123

Query: 585 WWKSVAVVEDHANEPVSWERFKDLLYDYYFLETVRDDKETEFLHLTQGTMSVHQ------ 644
           WW  VA VEDH NEP++W   KDLLYDYYF +T++D+KE EFLHLTQ T+ V Q      
Sbjct: 124 WWDVVATVEDHTNEPITWTTSKDLLYDYYFPKTIKDEKEIEFLHLTQRTLMVAQYEKKFT 183

Query: 645 ----------------------RLREEICGTIFLNAPTTFAAALRGVLVMDKNLAKKVQS 700
                                  L + I G I L  PTT+A A++G LVMDK++ +K Q 
Sbjct: 184 EFSRFALDLIPTEARKIKRFVRGLWKGIKGPIDLQRPTTYAEAIKGALVMDKDVIEKAQP 243

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BLAST of Lag0035661 vs. NCBI nr
Match: XP_022156546.1 (uncharacterized protein LOC111023424 [Momordica charantia])

HSP 1 Score: 191.8 bits (486), Expect = 2.0e-44
Identity = 109/250 (43.60%), Postives = 139/250 (55.60%), Query Frame = 0


Query: 497 NPPFPP--DQHEVDPP-PPSRQQKTV--------------------EDPIVSQFIRDFKQ 556
           +PP PP  DQ  V PP PP+  Q+                           +QFI+DFK+
Sbjct: 24  DPPPPPIGDQAGVVPPFPPAAAQELALINNTAGVGGAQTQPPRHLHTPQSEAQFIKDFKR 83

Query: 557 YGPPSFDGRSDNPLAVKRWIDNLEAMFDYMNCDDCLKARGVVFMLRGEARNWWKSVAVVE 616
           YGPP+F G S+     + W+  LEA++ Y+ C+D  K +G VFMLR EA NWW SVA  E
Sbjct: 84  YGPPTFGGGSERATLAEEWVRELEALYAYLGCEDQFKVKGAVFMLRSEALNWWDSVAATE 143

Query: 617 DHANEPVSWERFKDLLYDYYFLETVRDDKETEFLHLTQGTMSVHQ--------------- 676
           DHAN PV W RFK+LLYD+Y+ ETV D KE EFLHL QGT++V Q               
Sbjct: 144 DHANVPVPWARFKNLLYDHYYRETVEDMKEVEFLHLVQGTLTVAQYERKFTELSSFALEL 203

Query: 677 -------------RLREEICGTIFLNAPTTFAAALRGVLVMDKNLAKKVQSRWEVGSSSG 696
                         L + I G++ L  P T+A A+RG L+MDK+++ +VQ   EVGSS G
Sbjct: 204 IPTEAMKIKRFVKGLHKGIRGSVDLQRPVTYAEAVRGTLIMDKDVSNRVQPLVEVGSSLG 263

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BLAST of Lag0035661 vs. NCBI nr
Match: XP_022155925.1 (uncharacterized protein LOC111022925 [Momordica charantia])

HSP 1 Score: 189.1 bits (479), Expect = 1.3e-43
Identity = 103/206 (50.00%), Postives = 129/206 (62.62%), Query Frame = 0


Query: 512 PSRQQKTVEDPIVSQFIRDFKQYGPPSFDGRSDNPLAVKRWIDNLEAMFDYMNCDDCLKA 571
           PSR Q + E+    QFIRDFK++GPP F+G S+ P A + W+  LEA++ Y+ C D  K 
Sbjct: 60  PSRGQISQEE---VQFIRDFKRFGPPVFNGVSERPTAAEEWVRELEALYVYLGCSDDFKV 119

Query: 572 RGVVFMLRGEARNWWKSVAVVEDHANEPVSWERFKDLLYDYYFLETVRDDKETEFLHLTQ 631
           RG VFML+GEA NWW+SVA  EDHAN PV+W RFKDLLY+YYF  TVR++K  EFL LTQ
Sbjct: 120 RGAVFMLQGEAVNWWESVAAAEDHANVPVTWARFKDLLYEYYFPVTVRNEKRAEFLRLTQ 179

Query: 632 GTMSVHQ----------------------------RLREEICGTIFLNAPTTFAAALRGV 690
            ++ V Q                             LR EI G + L  PTT+AAA+R  
Sbjct: 180 ESLIVAQYERKFTELSRFGMQYIPTEQLKIDKFIDGLRREIKGLLVLKEPTTYAAAVRCA 239

[Close]

BLAST of Lag0035661 vs. ExPASy TrEMBL
Match: A0A6J1DUM2 (uncharacterized protein LOC111023247 OS=Momordica charantia OX=3673 GN=LOC111023247 PE=4 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 4.3e-48
Identity = 109/225 (48.44%), Postives = 135/225 (60.00%), Query Frame = 0


Query: 499 PFPPDQHEVDPPPPSRQQKTVEDPIVSQFIRDFKQYGPPSFDGRSDNPLAVKRWIDNLEA 558
           P P     V  PPP        +   ++FI+DFK+YGPP+FDG S+   AV+ WI  LEA
Sbjct: 15  PAPGGVGGVQAPPPQHLHTPQSE---ARFIKDFKRYGPPTFDGESERATAVEEWIRELEA 74

Query: 559 MFDYMNCDDCLKARGVVFMLRGEARNWWKSVAVVEDHANEPVSWERFKDLLYDYYFLETV 618
           ++ Y+ C+D  K +G VFMLRGEA NWW SVA  ED+AN P+ W RFK+LLYDYY+ ETV
Sbjct: 75  LYAYLGCEDQFKVKGAVFMLRGEALNWWDSVAAAEDYANVPIPWARFKNLLYDYYYPETV 134

Query: 619 RDDKETEFLHLTQGTMSVHQ----------------------------RLREEICGTIFL 678
           +D KE EFLHL QGT+SV Q                             LR+ I G + L
Sbjct: 135 KDMKEAEFLHLVQGTLSVAQYERKFTELSRFALELIPTEALKIKRFVKGLRKGIRGPVDL 194

Query: 679 NAPTTFAAALRGVLVMDKNLAKKVQSRWEVGSSSGVKRKPPPTQA 696
             PTT+A A+RG LVMDK+++ K     EVGSSSGVKRK P T A
Sbjct: 195 QRPTTYAEAVRGALVMDKDVSNKASPLPEVGSSSGVKRKFPSTYA 236

[Close]

BLAST of Lag0035661 vs. ExPASy TrEMBL
Match: A0A6J1DL73 (uncharacterized protein LOC111022144 OS=Momordica charantia OX=3673 GN=LOC111022144 PE=4 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 4.3e-48
Identity = 102/202 (50.50%), Postives = 126/202 (62.38%), Query Frame = 0


Query: 525 SQFIRDFKQYGPPSFDGRSDNPLAVKRWIDNLEAMFDYMNCDDCLKARGVVFMLRGEARN 584
           + FI+DFK+YGPP+FDG S+   A + WI  LEA + Y+ C+D  K +G VFMLRGEA N
Sbjct: 11  AHFIKDFKRYGPPTFDGESERATAAEEWIRELEAFYAYLGCEDQFKVKGAVFMLRGEALN 70

Query: 585 WWKSVAVVEDHANEPVSWERFKDLLYDYYFLETVRDDKETEFLHLTQGTMSVHQ------ 644
           WW S+A  EDHAN  + W RFKDLLYDYY+LETV+D KE EFLHL QGT+SV Q      
Sbjct: 71  WWDSIAAAEDHANVTIPWARFKDLLYDYYYLETVKDMKEAEFLHLVQGTLSVAQYERKFT 130

Query: 645 ----------------------RLREEICGTIFLNAPTTFAAALRGVLVMDKNLAKKVQS 699
                                  L + I G + L  P ++A A+RG L+MDK+++ K  S
Sbjct: 131 ELSRFALELILNAAMKIKRFVKGLSKGIRGPVDLQRPASYAEAVRGALIMDKDVSNKAPS 190

[Close]

BLAST of Lag0035661 vs. ExPASy TrEMBL
Match: A0A6J1DCW8 (uncharacterized protein LOC111019603 OS=Momordica charantia OX=3673 GN=LOC111019603 PE=4 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 8.1e-47
Identity = 100/204 (49.02%), Postives = 131/204 (64.22%), Query Frame = 0


Query: 525 SQFIRDFKQYGPPSFDGRSDNPLAVKRWIDNLEAMFDYMNCDDCLKARGVVFMLRGEARN 584
           +QFIRDF++YGPP+F+G S+    V+ WI  LEA++ Y+ C D LK +G VFMLRGEA N
Sbjct: 64  AQFIRDFRRYGPPTFNGESEKATVVEEWIRELEALYTYLGCSDQLKVKGAVFMLRGEALN 123

Query: 585 WWKSVAVVEDHANEPVSWERFKDLLYDYYFLETVRDDKETEFLHLTQGTMSVHQ------ 644
           WW  VA VEDH NEP++W   KDLLYDYYF +T++D+KE EFLHLTQ T+ V Q      
Sbjct: 124 WWDVVATVEDHTNEPITWTTSKDLLYDYYFPKTIKDEKEIEFLHLTQRTLMVAQYEKKFT 183

Query: 645 ----------------------RLREEICGTIFLNAPTTFAAALRGVLVMDKNLAKKVQS 700
                                  L + I G I L  PTT+A A++G LVMDK++ +K Q 
Sbjct: 184 EFSRFALDLIPTEARKIKRFVRGLWKGIKGPIDLQRPTTYAEAIKGALVMDKDVIEKAQP 243

[Close]

BLAST of Lag0035661 vs. ExPASy TrEMBL
Match: A0A6J1DVA0 (uncharacterized protein LOC111023424 OS=Momordica charantia OX=3673 GN=LOC111023424 PE=4 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 9.9e-45
Identity = 109/250 (43.60%), Postives = 139/250 (55.60%), Query Frame = 0


Query: 497 NPPFPP--DQHEVDPP-PPSRQQKTV--------------------EDPIVSQFIRDFKQ 556
           +PP PP  DQ  V PP PP+  Q+                           +QFI+DFK+
Sbjct: 24  DPPPPPIGDQAGVVPPFPPAAAQELALINNTAGVGGAQTQPPRHLHTPQSEAQFIKDFKR 83

Query: 557 YGPPSFDGRSDNPLAVKRWIDNLEAMFDYMNCDDCLKARGVVFMLRGEARNWWKSVAVVE 616
           YGPP+F G S+     + W+  LEA++ Y+ C+D  K +G VFMLR EA NWW SVA  E
Sbjct: 84  YGPPTFGGGSERATLAEEWVRELEALYAYLGCEDQFKVKGAVFMLRSEALNWWDSVAATE 143

Query: 617 DHANEPVSWERFKDLLYDYYFLETVRDDKETEFLHLTQGTMSVHQ--------------- 676
           DHAN PV W RFK+LLYD+Y+ ETV D KE EFLHL QGT++V Q               
Sbjct: 144 DHANVPVPWARFKNLLYDHYYRETVEDMKEVEFLHLVQGTLTVAQYERKFTELSSFALEL 203

Query: 677 -------------RLREEICGTIFLNAPTTFAAALRGVLVMDKNLAKKVQSRWEVGSSSG 696
                         L + I G++ L  P T+A A+RG L+MDK+++ +VQ   EVGSS G
Sbjct: 204 IPTEAMKIKRFVKGLHKGIRGSVDLQRPVTYAEAVRGTLIMDKDVSNRVQPLVEVGSSLG 263

[Close]

BLAST of Lag0035661 vs. ExPASy TrEMBL
Match: A0A6J1DNV8 (uncharacterized protein LOC111022925 OS=Momordica charantia OX=3673 GN=LOC111022925 PE=4 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 6.4e-44
Identity = 103/206 (50.00%), Postives = 129/206 (62.62%), Query Frame = 0


Query: 512 PSRQQKTVEDPIVSQFIRDFKQYGPPSFDGRSDNPLAVKRWIDNLEAMFDYMNCDDCLKA 571
           PSR Q + E+    QFIRDFK++GPP F+G S+ P A + W+  LEA++ Y+ C D  K 
Sbjct: 60  PSRGQISQEE---VQFIRDFKRFGPPVFNGVSERPTAAEEWVRELEALYVYLGCSDDFKV 119

Query: 572 RGVVFMLRGEARNWWKSVAVVEDHANEPVSWERFKDLLYDYYFLETVRDDKETEFLHLTQ 631
           RG VFML+GEA NWW+SVA  EDHAN PV+W RFKDLLY+YYF  TVR++K  EFL LTQ
Sbjct: 120 RGAVFMLQGEAVNWWESVAAAEDHANVPVTWARFKDLLYEYYFPVTVRNEKRAEFLRLTQ 179

Query: 632 GTMSVHQ----------------------------RLREEICGTIFLNAPTTFAAALRGV 690
            ++ V Q                             LR EI G + L  PTT+AAA+R  
Sbjct: 180 ESLIVAQYERKFTELSRFGMQYIPTEQLKIDKFIDGLRREIKGLLVLKEPTTYAAAVRCA 239

The following BLAST results are available for this feature:

BLAST of Lag0035661 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022155000.1	8.9e-48	50.50	uncharacterized protein LOC111022144 [Momordica charantia]	[more]
XP_022156326.1	8.9e-48	48.44	uncharacterized protein LOC111023247 [Momordica charantia]	[more]
XP_022151688.1	1.7e-46	49.02	uncharacterized protein LOC111019603 [Momordica charantia]	[more]
XP_022156546.1	2.0e-44	43.60	uncharacterized protein LOC111023424 [Momordica charantia]	[more]
XP_022155925.1	1.3e-43	50.00	uncharacterized protein LOC111022925 [Momordica charantia]	[more]

BLAST of Lag0035661 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Lag0035661 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DUM2	4.3e-48	48.44	uncharacterized protein LOC111023247 OS=Momordica charantia OX=3673 GN=LOC111023...	[more]
A0A6J1DL73	4.3e-48	50.50	uncharacterized protein LOC111022144 OS=Momordica charantia OX=3673 GN=LOC111022...	[more]
A0A6J1DCW8	8.1e-47	49.02	uncharacterized protein LOC111019603 OS=Momordica charantia OX=3673 GN=LOC111019...	[more]
A0A6J1DVA0	9.9e-45	43.60	uncharacterized protein LOC111023424 OS=Momordica charantia OX=3673 GN=LOC111023...	[more]
A0A6J1DNV8	6.4e-44	50.00	uncharacterized protein LOC111022925 OS=Momordica charantia OX=3673 GN=LOC111022...	[more]

BLAST of Lag0035661 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005162	Retrotransposon gag domain	PFAM	PF03732	Retrotrans_gag	coord: 574..638 e-value: 4.3E-9 score: 36.5 coord: 333..397 e-value: 1.6E-8 score: 34.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 247..273
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 494..518
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 439..466
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 681..706
None	No IPR available	PANTHER	PTHR34482:SF4	POLYMERASES SUPERFAMILY PROTEIN, PUTATIVE ISOFORM 1-RELATED	coord: 297..396
None	No IPR available	PANTHER	PTHR34482	DNA DAMAGE-INDUCIBLE PROTEIN 1-LIKE	coord: 297..396
None	No IPR available	PANTHER	PTHR34482	DNA DAMAGE-INDUCIBLE PROTEIN 1-LIKE	coord: 538..637
None	No IPR available	PANTHER	PTHR34482:SF4	POLYMERASES SUPERFAMILY PROTEIN, PUTATIVE ISOFORM 1-RELATED	coord: 538..637

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0035661.1	Lag0035661.1	mRNA