Lag0035639 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0035639
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionRNase H domain-containing protein
Locationchr3: 26024607 .. 26029456 (+)
RNA-Seq ExpressionLag0035639
SyntenyLag0035639
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTATGCGTTTTCTGCGGGAAGCGGGGGGAATCTAGCATGCATTTTTTTGGGAATGCAAATGGGCCAAATCGATCCTACGAGAAGCGGGTTTTGGGGAGATCTTGGAGAAAGTCCGAGCAGGATGTTGTCTACTACTCTGTCGGGACATCAGAGAGGTGATAGAGGGGGAGAAGTTTGAGGAACTGGTGGTGTTATGGTGGTCGATGTGGTCGACCCTGGAATAAAGTTCGTCTTAAAGGGGCTGAGAGGCCGAGTGGGCTAGTGGAATGGGCGAAGGGGTATGTGGTGGCTTTTCGTGAGGTTGGGAGGAGTAGTGGGGAAGTGGGGCGGGAATGGTTGGTCGGGAGAGGGTTGTGTGGCGGGCCCCGAGGAATGGCTGGTATAAGGTGAATTTTGATGCCTCTTTCCTTTCTCATTTGTCCAGGGCCGGCCTAGGGATAATTGTGCGGGATCCTTTGGGCCAAGTAATGCTGTCGGCGACCTTTACTAAGGATAATGTGAGGGATGTTGACATGGCTGAAGGATATGCGGCCGTGAAAAGTTTGGAGTTGGTGGCAGATATGGGTTTGGCTCCAGCAATTCTTGAGACGGATTCGAGTAGAGTTTCCAGATCCTTAATCGAGAACGTGAGGATATTTCTGAGCTAGGTATGATTATTGCAGATGCACTAATGGCTTTTCCCTCTAATTTGCAGGTACTGTTTCAGTTCGTTCACCGTGAAGGGAATCAGGCGGCGCACCGATTGGCGAGGTTAGCAATAGCCCAGTGGAGTGATGAGGTTTGGATGAAGACTTGTCCTAGGTGCCTGGAGGACGTGGTTTTGAACGATTCAATGTACATGAAGGCATGAGGTGGGGACTAAGCTATGCAAACTTCGGCCTGTATGCCAACTGACGTGACACGCAATCAGGGGAGGTTTCTGTTTCCTCTTTTTCTTGGGTTGTGTATGCCTGATGTGGACTACATCGGGGAGAGTGCATGGTCATGGGGGTTTTGGGTTGTTGCCTGCATGCTAGTGAATATTAGACTGACGATGTTTGCATATGAGCATCAGGACAATTTTAATTCATGTTTATTTATGTGTTTTCCATGAATTTTGGCTGGGGGTCATGCATCTGAGTAGTGGGCCTTTTGTTTTCTGGGATTAATGGAAGTCGTGGTGAAGTCTAATGGCTGAGTTCTGGGTTCGGGTTTTTGAGTCATGATACTGCTGTTGAGTACTCGCATACTCTTTCTTTGGTGTATAGGTGAGGTTTTAGCTTGCTAGCATAATTTTGGGGCTAGTCTGTTGCTTTCTGAATGTCTTGCACTTTTTGAGCACTTGGCCTTCCTTTATGTAGGTTTGAAGGCCTAGACCGGCTTTATGGGGTTCATAAGTCTGTTGTCACTCCGATAGGGGTTAGGTTTTCGCTAGGGAGTATCTGATCTTTGTAGTTTTGGTTTGTTGTCTTGGCCTTTGGGGAATTGAGAGGCTTTGAAAAAGGAATAAAAGAAAAGAAAGAAAAGAAATGGAAAAGCGAAAATGCAAAAAGAAGGAAGAAATGGAAAAGCGAAAATGCGAAAAAGAAAGAAAAGAAATGAAAAGCATGAGTGATTTGGGGCTTGGGGGTCTCCTTTTGGGGAAAGTACATGCACACTGTTTGTTTTCCTAAAAGCTTGTTATGTGTCTCTGATTACTTATAAGCATGGGGTAAAAAGAGCTACCTTTCAGTGTGTTCAGTTAGGCCAACCAAGGGCTGTAGCCTGGGTTAGGGGTCCCTGCACTGTAGTGTGAAAGCTAGTGCTCTTGATTGTAGCATCAGTGTGCATTAGGATAAGGAAAAGGAAAGTGAATCCTTTTCTGGTTCCTGGGTTTTGAGATAGCTTTCTAAATCTGCGCCAGTCGGTCTCCCTTGCGAAACCTTAGTTGTCAGTGTAGGGGGAAGATAGGTGGAGGATCCCATAAATCTGTTGCTGGGCCATTAGAGACTCCTTTAGGTTGGCTAATCACACACACACGCGAGTTTCTTGGAAGCTTTGATCTGTGTCCATATTTTACTAGCTGTGATAACTTCTCTTAGGCTAAAGTTTGAGTAGATGTCGTCCAGGATAATGAGTATTTTTGCAACCCCTAGAATCTGCTATTGGTATTTCGTTCAGGGGTATGGGTTACATGTGGATTGATGAGATTAGGGTAGGGGTGATAGGGGTTTGGGTTTTTCTATCTAAGCTGCTTATCTCTTTGATGTTTTAAGATGGTTTGTTCGGGTGTTCTGTTACAGGTGGTGAGCCTAAGGCCACAAACCTACATGGAACATTTCATACTTATCTAGGACGCAAAAGGATGGATGTTTGGAGAGCTAGCTGAATCCAAATGACATCTACTAACTGGTGGCTTGGCGCTCTCATCGCATACTCGTCAGAAAAGGAGAGTGTTTTGTCTGGCTTGGAAGGATGATGCCTCTCAATGTGTAGAGTTTTTGTTCCCTTCTGACTGTCGATTGTATTGGTTTTGCCGTTGGGCAATCTGCTTGCTTACAATGAAAGGTTAATGTTATAAAAAAAAAACTTAATAATTATATATTATATCTAAAAAAAATTTAAATTTGTTTCCGAACTTTATTATTATTATTATTATTATTATTATTATTTACTATGGTTTCCAACGTTTCTCTAGGTAGACATTAACTTACCAAGTTAATGAATAAAAGGCTTATACATATTAAATATTTTCATATAATTTTTTTAAAATCAATATAAGGATTAAAAATATATTTTACAAAAAAAAATTAAATACTTGATAATGAAAAAGAAATAAATTTTATAAACCAACAATAAGAAGAAAAAAAGAGGATGAACTCATCTTCATTCATTTTGATTTGGTGATAATTGTTGTAATTGACCTTATCACGATCGATGACCTTCAAGAAATCAATGATCGTGGAACACTTGTGGGAGTTTAAGTTAGATATACATATCATTGTGGTTAAAGAAATACAAGTTGTGTTGTGGGGTAGTTCGAATCTTCTATTTTTCTATAAAAAAAAAATGAAAGAAAAAAACAACACACAAGCCCATCTAAAAGAAAAAAAAAGAATTATTAAATTATCTCATTGGGAGTGATTCCAATATTACATTTCTTTATAAAAAATTAAAAAAAAAAAAACATGCAAGCATAGCTATGAGAAATTAGATGCACCAATAATGAGAAATTAGAATAAATGAATGAAGTAAAAAAGTTACCATGAATCTTTGCCTTTGCATTTTGGTTTCGGTTTTGAGGTTGATGATAAGTTCCATCAATTTATTTAGAAATGTAAAATGAAGAGGGAGGAATGATATATGACATATGGTAAGTTGCTAACCAAAGAAGATGAAGAATTGTAAGGGTAGAGTGAGAGAAATTGTAGGGAAGTAGGTACTATTTTCATTCACTTTCATCAATACATTTAACACACAAAAAATAAAAGTAATTATAATGAAAATTGGATGCAAGACACGTGAGGATGGGAGAGATAACATAGAGAGAGTGTATGATTAAGGGGGAGAGAAAAGTGATTAAAATGAAAGTAAGGAAAGGACAACTTAGGTATTTCTAGTAAGGGTGTACAAGTAACCCGACAATCCAACCCAAACCGTAAGGATTGGGTTGGGTTAGAAATTTTTTCACTTTGGGTTGGGTTGTTTTTTTTTAAAAAAAAAAAACCGAAAATTCGGTTTAGTTCTCGAGTTAGGTTTTCTTGGGTTGGGTTCAACCCAAACCGAACCGAATTCCTTATTTTTTAAAAAAAAAAATTATATATATCTTTATATATATATATATATATATATATATTACAACTTTTTTGGATGTTTTTCTTAAAAGAAAAATTATTCTAACTTTATTTTTTTTCATAGATTTATTTAGATTTGTTTTTTTTTTTTACAAAATATTTAGATTTGTTTTATTGCTATTTGTTTAATTTTTTTAAATCAATATTCTATTTCTTGAATAAGGTTAATCTGATTTGAATATTGTGTTGGGATTTAGATAGAAATATGTATTTTGTGTTAGGATTAGAGGTAAAGATTGAACTTGTGTATTTTCAAATTGGAAATTGGGAATTGAGTTTAGTTTAATTTTTTTTAAAAAAATTGAACAACTCGATGACCCAACCCAACCCAACCCGAAATAAAAGGGTTGGGTTGGGTTGGGTTGCCAACTTTATTCGGTTCTTTCGGGTCGTCAACCCGACCAACCCGATATTAAGATAGTCCATTAGTTATTATTTGTATTTGTATTTGTATCTTGGCCCAATTGTTTTAGGCCCAATATTTCAACCCTTTTCCTCTCGTTATTTCAGTATGTATTAGGGCAGATGATGAAGATTCTGGAAGATGTATTTTTCTTATTATTTTTGCAAGAGTTTTTTTATATCCAGGCCTTTATATATGGCGTGAACAGTGTAATCCCCATATATGAATACGTAGGGTTTTTCTCCTACAAGATTGGTGTCCTCTTCTTCTTTCTTCTTTCAATATGATTTTTTTTTTGAAGGAAAACTTCTTTCAATATGATTTTTGCAATGTTATGATGGTCTCAGAATTTAAGTCTAACAACTAAGCATCTGACCTAATTTTTTTTCGAAGCTGTCTTCCCAGAGTGGTACCAGTGCGGCATTGGAAGAGTCTTCTGCTTCATCTCAAATTTTTGAACCTGGTAATAAGGTTTCGATTGTGAAACTTACTGATGATAACTTTCTTTTATGGAAATTTCAGATTCAATTTGCTCTTAAGGATTACAACTTGGAATCCTATTTGCATGATGATCCGCTTGCTCAATATTTACAACCCCCTCTGATTCTGTCACAAGAGAAGGTTCTTCGGTAG

mRNA sequence

ATGTATGCGTTTTCTGCGGGAAGCGGGGGGAATCTAGCATGCATTTTTTTGGGAATGCAAATGGGCCAAATCGATCCTACGAGAAGCGGGTTTTGGGGAGATCTTGGAGAAAGTCCGAGCAGGATGTTGTCTACTACTCTGTCGGGACATCAGAGAGGGGCTGAGAGGCCGAGTGGGCTAGTGGAATGGGCGAAGGGGTATGTGGTGGCTTTTCGTGAGGTTGGGAGGAGTAGTGGGGAAGTGGGGCGGGAATGGGCCGGCCTAGGGATAATTGTGCGGGATCCTTTGGGCCAAGTAATGCTGTCGGCGACCTTTACTAAGGATAATGTGAGGGATGTTGACATGGCTGAAGGATATGCGGCCGTGAAAAGTTTGGAGTTGGTGGCAGATATGGGTTTGGCTCCAGCAATTCTTGAGACGGATTCGAGTAGAGTTTCCAGATCCTTAATCGAGAACGTACTGTTTCAGTTCGTTCACCGTGAAGGGAATCAGGCGGCGCACCGATTGGCGAGGTTAGCAATAGCCCAGTGGAGTGATGAGGTTTGGATGAAGACTTGTCCTAGGTGCCTGGAGGACGTGGTTTTGAACGATTCAATGTTTGAAGGCCTAGACCGGCTTTATGGGGTTCATAAGTCTGTTGTCACTCCGATAGGGGTTAGTCGGTCTCCCTTGCGAAACCTTAGTTGTCAGTGTAGGGGGAAGATAGGTGGAGGATCCCATAAATCTGTTGCTGGGCCATTAGAGACTCCTTTAGAATCTGCTATTGGTATTTCGTTCAGGGGTATGGGTTACATGTGGATTGATGAGATTAGGAGTGGTACCAGTGCGGCATTGGAAGAGTCTTCTGCTTCATCTCAAATTTTTGAACCTGGTAATAAGGTTTCGATTGTGAAACTTACTGATGATAACTTTCTTTTATGGAAATTTCAGATTCAATTTGCTCTTAAGGATTACAACTTGGAATCCTATTTGCATGATGATCCGCTTGCTCAATATTTACAACCCCCTCTGATTCTGTCACAAGAGAAGGTTCTTCGGTAG

Coding sequence (CDS)

ATGTATGCGTTTTCTGCGGGAAGCGGGGGGAATCTAGCATGCATTTTTTTGGGAATGCAAATGGGCCAAATCGATCCTACGAGAAGCGGGTTTTGGGGAGATCTTGGAGAAAGTCCGAGCAGGATGTTGTCTACTACTCTGTCGGGACATCAGAGAGGGGCTGAGAGGCCGAGTGGGCTAGTGGAATGGGCGAAGGGGTATGTGGTGGCTTTTCGTGAGGTTGGGAGGAGTAGTGGGGAAGTGGGGCGGGAATGGGCCGGCCTAGGGATAATTGTGCGGGATCCTTTGGGCCAAGTAATGCTGTCGGCGACCTTTACTAAGGATAATGTGAGGGATGTTGACATGGCTGAAGGATATGCGGCCGTGAAAAGTTTGGAGTTGGTGGCAGATATGGGTTTGGCTCCAGCAATTCTTGAGACGGATTCGAGTAGAGTTTCCAGATCCTTAATCGAGAACGTACTGTTTCAGTTCGTTCACCGTGAAGGGAATCAGGCGGCGCACCGATTGGCGAGGTTAGCAATAGCCCAGTGGAGTGATGAGGTTTGGATGAAGACTTGTCCTAGGTGCCTGGAGGACGTGGTTTTGAACGATTCAATGTTTGAAGGCCTAGACCGGCTTTATGGGGTTCATAAGTCTGTTGTCACTCCGATAGGGGTTAGTCGGTCTCCCTTGCGAAACCTTAGTTGTCAGTGTAGGGGGAAGATAGGTGGAGGATCCCATAAATCTGTTGCTGGGCCATTAGAGACTCCTTTAGAATCTGCTATTGGTATTTCGTTCAGGGGTATGGGTTACATGTGGATTGATGAGATTAGGAGTGGTACCAGTGCGGCATTGGAAGAGTCTTCTGCTTCATCTCAAATTTTTGAACCTGGTAATAAGGTTTCGATTGTGAAACTTACTGATGATAACTTTCTTTTATGGAAATTTCAGATTCAATTTGCTCTTAAGGATTACAACTTGGAATCCTATTTGCATGATGATCCGCTTGCTCAATATTTACAACCCCCTCTGATTCTGTCACAAGAGAAGGTTCTTCGGTAG

Protein sequence

MYAFSAGSGGNLACIFLGMQMGQIDPTRSGFWGDLGESPSRMLSTTLSGHQRGAERPSGLVEWAKGYVVAFREVGRSSGEVGREWAGLGIIVRDPLGQVMLSATFTKDNVRDVDMAEGYAAVKSLELVADMGLAPAILETDSSRVSRSLIENVLFQFVHREGNQAAHRLARLAIAQWSDEVWMKTCPRCLEDVVLNDSMFEGLDRLYGVHKSVVTPIGVSRSPLRNLSCQCRGKIGGGSHKSVAGPLETPLESAIGISFRGMGYMWIDEIRSGTSAALEESSASSQIFEPGNKVSIVKLTDDNFLLWKFQIQFALKDYNLESYLHDDPLAQYLQPPLILSQEKVLR
Homology
[Close]
BLAST of Lag0035639 vs. NCBI nr
Match: XP_022140628.1 (uncharacterized protein LOC111011237 [Momordica charantia])

HSP 1 Score: 97.1 bits (240), Expect = 3.3e-16
Identity = 71/195 (36.41%), Postives = 91/195 (46.67%), Query Frame = 0 

Query: 60  LVEWAKGYVVAFREV------GRSSGEVGREW----------------------AGLGII 119
           LVEWA  YV+ FRE       GR +      W                      AGLGII
Sbjct: 3   LVEWANKYVMEFREANSNPFPGRVTNTAEVLWLPPDKRIYKINTDASFLASDQHAGLGII 62

Query: 120 VRDPLGQVMLSATFTKDNVRDVDMAEGYAAVKSLELVADMGLAPAILETDSSRV------ 179
           +R+  GQVM SAT   +N++ VDMAE   AV+ L+L + +G+ P ILETDSSR+      
Sbjct: 63  IRNDRGQVMASATKYLENIQSVDMAEAIVAVEGLQLASKIGVNPVILETDSSRIFNLFSQ 122

Query: 180 -SRSLIE----------------NVLFQFVHREGNQAAHRLARLAIAQWSDEVWMKTCP- 195
            S  L E                +  F FV REGN+AAH LAR A+      +WM+  P 
Sbjct: 123 PSEDLSETGEIVLKAKNFWTQSLHASFNFVKREGNKAAHMLARRALLLREFSIWMEDWPL 182

[Close]
BLAST of Lag0035639 vs. NCBI nr
Match: XP_022150918.1 (uncharacterized protein LOC111018954 [Momordica charantia])

HSP 1 Score: 85.5 bits (210), Expect = 9.8e-13
Identity = 60/173 (34.68%), Postives = 83/173 (47.98%), Query Frame = 0 

Query: 60   LVEWAKGYVVAFRE------VGRSSGEVGREW----------------------AGLGII 119
            LVEWA  Y + FRE       GR +      W                      AGLGII
Sbjct: 960  LVEWANKYAMEFREAKSNPITGRVTNTAEILWQPPDEGIYKINTDASFLASDQHAGLGII 1019

Query: 120  VRDPLGQVMLSATFTKDNVRDVDMAEGYAAVKSLELVADMGLAPAILETDSSRVSRSLIE 179
            + +  GQVM +AT   +N++ VDMAE  AAV+ L+L +++G+ PA+   D S     +++
Sbjct: 1020 IHNDRGQVMAAATKYLENIQSVDMAEAIAAVEGLQLASEIGMHPAL--EDLSETGEIVLK 1079

Query: 180  ---------NVLFQFVHREGNQAAHRLARLAIAQWSDEVWMKTCP----RCLE 192
                     +  F FV REGN+AAH LAR A+      +WM+  P     CLE
Sbjct: 1080 AKNFWTQSLHASFNFVKREGNKAAHMLARRALLLHEFSIWMEDWPLELKSCLE 1130

[Close]
BLAST of Lag0035639 vs. NCBI nr
Match: XP_040987788.1 (uncharacterized protein LOC121235507 [Juglans microcarpa x Juglans regia])

HSP 1 Score: 69.7 bits (169), Expect = 5.6e-08
Identity = 42/137 (30.66%), Postives = 69/137 (50.36%), Query Frame = 0 

Query: 87  GLGIIVRDPLGQVMLSATFTKDNVRDVDMAEGYAAVKSLELVADMGLAPAILETDSSRVS 146
           GLG+I+RD  G+V  +A  T++    +  AE  A  +++ L  ++GL   I E D+  V 
Sbjct: 478 GLGVIIRDCRGEVYAAACLTREASYGIFRAECIAMWEAMVLCEELGLGEVIFEGDAKSVI 537

Query: 147 RS-------------LIENVL----------FQFVHREGNQAAHRLARLAIAQWSDEVWM 201
            +             L+EN+             F+HREGN+ AH+LA+LA+   +D  W+
Sbjct: 538 DAVSSGEKDDSSYGHLVENLQQKLNFYSRWEVAFIHREGNEVAHQLAKLALYGDNDMYWV 597

[Close]
BLAST of Lag0035639 vs. NCBI nr
Match: XP_042958143.1 (uncharacterized protein LOC122293710 [Carya illinoinensis])

HSP 1 Score: 69.7 bits (169), Expect = 5.6e-08
Identity = 49/171 (28.65%), Postives = 79/171 (46.20%), Query Frame = 0 

Query: 58  SGLVEWAK---GYVVAFREVGRSSGEVGREWAGLGIIVRDPLGQVMLSATFTKDNVRDVD 117
           SG   W K   G++ A      ++  +     GLGI++RD +G+V+  A F K  + D  
Sbjct: 67  SGSQRWIKPIQGFIKANWNASTNTSNL-----GLGIVLRDEVGEVLACACFKKPPISDSS 126

Query: 118 MAEGYAAVKSLELVADMGLAPAILETDSSRVSRS-------------LIENV-------- 177
           +AE  A  +++EL  ++G    ILE D+  V  +             ++E+V        
Sbjct: 127 LAETMALWQAVELSHELGFNRVILEGDAQVVISAVNSVDEDLSSGGHIVEDVKAVLRERR 186

Query: 178 --LFQFVHREGNQAAHRLARLAIAQWSDEVWMKTCPRCLEDVVLNDSMFEG 203
               QF  REGN+ AH LA+ A+    D++W+  CP  +   V  +S   G
Sbjct: 187 SWKIQFTRREGNEVAHLLAKKALLVEQDQIWIDECPDFISLQVCKESYCTG 232

[Close]
BLAST of Lag0035639 vs. NCBI nr
Match: XP_021736443.1 (uncharacterized protein LOC110702992 [Chenopodium quinoa])

HSP 1 Score: 68.6 bits (166), Expect = 1.2e-07
Identity = 44/134 (32.84%), Postives = 64/134 (47.76%), Query Frame = 0 

Query: 87  GLGIIVRDPLGQVMLSATFTKDNVRDVDMAEGYAAVKSLELVADMGLAPAILETDSSRVS 146
           GLG +VRD +G V+LS  +      DVD+ E  AA  SL +  + G    ILETD+ ++ 
Sbjct: 70  GLGCVVRDHVGDVLLSTCWRSREEYDVDIGEALAARHSLSISLEAGFRKVILETDNLKLL 129

Query: 147 RS-------------LIENVLF----------QFVHREGNQAAHRLARLAIAQWSDEVWM 198
           +              +++++L+            V R GN  AHRLA+ +I      VWM
Sbjct: 130 QHVKHRKTQCTSFGLIVKDILYLADSCVFFYVSQVGRMGNGVAHRLAKASIMYDVMRVWM 189

[Close]
BLAST of Lag0035639 vs. ExPASy TrEMBL
Match: A0A6J1CIF1 (uncharacterized protein LOC111011237 OS=Momordica charantia OX=3673 GN=LOC111011237 PE=4 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 1.6e-16
Identity = 71/195 (36.41%), Postives = 91/195 (46.67%), Query Frame = 0 

Query: 60  LVEWAKGYVVAFREV------GRSSGEVGREW----------------------AGLGII 119
           LVEWA  YV+ FRE       GR +      W                      AGLGII
Sbjct: 3   LVEWANKYVMEFREANSNPFPGRVTNTAEVLWLPPDKRIYKINTDASFLASDQHAGLGII 62

Query: 120 VRDPLGQVMLSATFTKDNVRDVDMAEGYAAVKSLELVADMGLAPAILETDSSRV------ 179
           +R+  GQVM SAT   +N++ VDMAE   AV+ L+L + +G+ P ILETDSSR+      
Sbjct: 63  IRNDRGQVMASATKYLENIQSVDMAEAIVAVEGLQLASKIGVNPVILETDSSRIFNLFSQ 122

Query: 180 -SRSLIE----------------NVLFQFVHREGNQAAHRLARLAIAQWSDEVWMKTCP- 195
            S  L E                +  F FV REGN+AAH LAR A+      +WM+  P 
Sbjct: 123 PSEDLSETGEIVLKAKNFWTQSLHASFNFVKREGNKAAHMLARRALLLREFSIWMEDWPL 182

[Close]
BLAST of Lag0035639 vs. ExPASy TrEMBL
Match: A0A6J1DAR4 (uncharacterized protein LOC111018954 OS=Momordica charantia OX=3673 GN=LOC111018954 PE=4 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 4.8e-13
Identity = 60/173 (34.68%), Postives = 83/173 (47.98%), Query Frame = 0 

Query: 60   LVEWAKGYVVAFRE------VGRSSGEVGREW----------------------AGLGII 119
            LVEWA  Y + FRE       GR +      W                      AGLGII
Sbjct: 960  LVEWANKYAMEFREAKSNPITGRVTNTAEILWQPPDEGIYKINTDASFLASDQHAGLGII 1019

Query: 120  VRDPLGQVMLSATFTKDNVRDVDMAEGYAAVKSLELVADMGLAPAILETDSSRVSRSLIE 179
            + +  GQVM +AT   +N++ VDMAE  AAV+ L+L +++G+ PA+   D S     +++
Sbjct: 1020 IHNDRGQVMAAATKYLENIQSVDMAEAIAAVEGLQLASEIGMHPAL--EDLSETGEIVLK 1079

Query: 180  ---------NVLFQFVHREGNQAAHRLARLAIAQWSDEVWMKTCP----RCLE 192
                     +  F FV REGN+AAH LAR A+      +WM+  P     CLE
Sbjct: 1080 AKNFWTQSLHASFNFVKREGNKAAHMLARRALLLHEFSIWMEDWPLELKSCLE 1130

[Close]
BLAST of Lag0035639 vs. ExPASy TrEMBL
Match: A0A5J9T963 (RNase H domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_41234 PE=4 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 1.8e-07
Identity = 45/138 (32.61%), Postives = 66/138 (47.83%), Query Frame = 0 

Query: 82  GREWAGLGIIVRDPLGQVMLSATFTKDNVRDVDMAEGYAAVKSLELVADMGLAPAILETD 141
           G   AGLGII+R+ LGQV+LSA     +V  V+  E  A ++ ++L ++      I+E+D
Sbjct: 15  GSRVAGLGIIIRNELGQVILSAWRAVFDVESVEEVEARACLEGVQLASEWCRQKIIVESD 74

Query: 142 SSRV----------------------SRSLIENVLFQFVHREGNQAAHRLARLAIAQWSD 198
              V                      S  ++ +V FQ V RE N  AH L++LA      
Sbjct: 75  CQNVVAPLNSGLPDKSLVFLLREIKSSSLVLPDVSFQTVKRERNVIAHELSQLAKRNVHT 134

[Close]
BLAST of Lag0035639 vs. ExPASy TrEMBL
Match: A2Q2Z8 (Polynucleotidyl transferase, Ribonuclease H fold OS=Medicago truncatula OX=3880 GN=MtrDRAFT_AC153128g17v2 PE=4 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 1.8e-07
Identity = 42/155 (27.10%), Postives = 78/155 (50.32%), Query Frame = 0 

Query: 52  RGAERPSGLVEWAKGYVVAFREVGRSSGEVGREWAGLGIIVRDPLGQVMLSATFTKDNVR 111
           R   RP+   +W +  +   +    ++ +   +W GLGII+RD +G VM ++T+  D   
Sbjct: 33  RSQHRPAKNTKWKRPNLGLVKVNTDANLQNHGKW-GLGIIIRDEVGLVMAASTWETDGND 92

Query: 112 DVDMAEGYAAVKSLELVADMGLAPAILETDSSRV-------SRSLIENVLFQFVHREGNQ 171
               AE YA +  +    D G    + E D+ ++       ++S  +   FQF  R GN+
Sbjct: 93  RALEAEAYALLTGMRFAKDCGFRKVVFEGDNEKLMKMEIHKAKSGFDICQFQFTFRSGNK 152

Query: 172 AAHRLARLAIAQWSDEVWMKTCPRCLEDVVLNDSM 200
            A+RLA+LA ++  ++VW++  P  +  +   D++
Sbjct: 153 VANRLAQLAHSE-PNKVWIEEVPIAISSLYFQDNL 185

[Close]
BLAST of Lag0035639 vs. ExPASy TrEMBL
Match: A0A2N9I7P8 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS47753 PE=4 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 1.8e-07
Identity = 52/172 (30.23%), Postives = 78/172 (45.35%), Query Frame = 0 

Query: 50   HQRGAERPSGLVEWAKGYVVAFREVGRSSGEVGREW--AGLGIIVRDPLGQVMLSATFTK 109
            H     +P+  V W     + ++      G V +E   AG+G+IVRD LG VM S T   
Sbjct: 1539 HSSVQHQPAPAVRWKPPRTLRYKI--NYDGAVFKETNEAGIGVIVRDSLGLVMASLTQKV 1598

Query: 110  DNVRDVDMAEGYAAVKSLELVADMGLAPAILETDSSRVSRSL------------------ 169
                 V   E +A  +S++   ++G+A A  E DS  +  +L                  
Sbjct: 1599 RFPHLVPSIEAWAVKRSIQFTLEIGIAEAEFEGDSQTIMNALNAPRPSLALFGLLIADAK 1658

Query: 170  -----IENVLFQFVHREGNQAAHRLARLAIAQWSDEVWMKTCPRCLEDVVLN 197
                 +++  F  V REGN+ AH LAR A +  S EVWM++ P  LE + L+
Sbjct: 1659 MLASQLQSFSFSHVKREGNRLAHALARKAHSCNSLEVWMESVPPDLEPLYLS 1708

The following BLAST results are available for this feature:
BLAST of Lag0035639 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022140628.13.3e-1636.41uncharacterized protein LOC111011237 [Momordica charantia][more]
XP_022150918.19.8e-1334.68uncharacterized protein LOC111018954 [Momordica charantia][more]
XP_040987788.15.6e-0830.66uncharacterized protein LOC121235507 [Juglans microcarpa x Juglans regia][more]
XP_042958143.15.6e-0828.65uncharacterized protein LOC122293710 [Carya illinoinensis][more]
XP_021736443.11.2e-0732.84uncharacterized protein LOC110702992 [Chenopodium quinoa][more]
BLAST of Lag0035639 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Lag0035639 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1CIF11.6e-1636.41uncharacterized protein LOC111011237 OS=Momordica charantia OX=3673 GN=LOC111011... [more]
A0A6J1DAR44.8e-1334.68uncharacterized protein LOC111018954 OS=Momordica charantia OX=3673 GN=LOC111018... [more]
A0A5J9T9631.8e-0732.61RNase H domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=E... [more]
A2Q2Z81.8e-0727.10Polynucleotidyl transferase, Ribonuclease H fold OS=Medicago truncatula OX=3880 ... [more]
A0A2N9I7P81.8e-0730.23Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS47753 PE=4 SV=1[more]
BLAST of Lag0035639 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002156Ribonuclease H domainPFAMPF13456RVT_3coord: 82..149
e-value: 4.1E-7
score: 29.8
IPR044730Ribonuclease H-like domain, plant typeCDDcd06222RNase_H_likecoord: 75..171
e-value: 5.29232E-10
score: 54.6276
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 85..182

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0035639.1Lag0035639.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0004523 RNA-DNA hybrid ribonuclease activity