Lag0035588 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0035588
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionUnknown protein
Locationchr3: 24725542 .. 24725964 (+)
RNA-Seq ExpressionLag0035588
SyntenyLag0035588
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATTTTGCTTCGTTATTATCTGGAGTTTTTACTCTTCATTATTTTCCAGATCTGCAGAATTTCGGCAAGATTACCTTTCTCCAGCCGTTTTTATTTCTTTTTTGAGCTTGACTCCAGGCGCTTACCAATATCTTTCAAATCAGCGGTTTCACTACACAGTGCTTATATTGGTGATGTTTCAACAATGGGTTTTTCATCGCAATCCAAACTCATATTTTTTCTTGACTTCACAGAGTGTTTTTTAGTGATGGCTTTTGAAAACATGCTTGCCAACTGCGAAAGGTTCAGTCTTACGACTGAAGAGGAATCTACTGAAGTGGATGTTGATCGCCAGACGGCTCGGGTCACTGGTCAATCGTTAGGCTTAAGCCTAATTGGGAAGCTGCTGGCCCCTCGGTTTATTTCCAACGATGTAATGTGA

mRNA sequence

ATGATTTTGCTTCGTTATTATCTGGAGTTTTTACTCTTCATTATTTTCCAGATCTGCAGAATTTCGGCAAGATTACCTTTCTCCAGCCGTTTTTATTTCTTTTTTGAGCTTGACTCCAGGCGCTTACCAATATCTTTCAAATCAGCGGTTTCACTACACAGTGCTTATATTGGTGATGTTTCAACAATGGGTTTTTCATCGCAATCCAAACTCATATTTTTTCTTGACTTCACAGAGTGTTTTTTAGTGATGGCTTTTGAAAACATGCTTGCCAACTGCGAAAGGTTCAGTCTTACGACTGAAGAGGAATCTACTGAAGTGGATGTTGATCGCCAGACGGCTCGGGTCACTGGTCAATCGTTAGGCTTAAGCCTAATTGGGAAGCTGCTGGCCCCTCGGTTTATTTCCAACGATGTAATGTGA

Coding sequence (CDS)

ATGATTTTGCTTCGTTATTATCTGGAGTTTTTACTCTTCATTATTTTCCAGATCTGCAGAATTTCGGCAAGATTACCTTTCTCCAGCCGTTTTTATTTCTTTTTTGAGCTTGACTCCAGGCGCTTACCAATATCTTTCAAATCAGCGGTTTCACTACACAGTGCTTATATTGGTGATGTTTCAACAATGGGTTTTTCATCGCAATCCAAACTCATATTTTTTCTTGACTTCACAGAGTGTTTTTTAGTGATGGCTTTTGAAAACATGCTTGCCAACTGCGAAAGGTTCAGTCTTACGACTGAAGAGGAATCTACTGAAGTGGATGTTGATCGCCAGACGGCTCGGGTCACTGGTCAATCGTTAGGCTTAAGCCTAATTGGGAAGCTGCTGGCCCCTCGGTTTATTTCCAACGATGTAATGTGA

Protein sequence

MILLRYYLEFLLFIIFQICRISARLPFSSRFYFFFELDSRRLPISFKSAVSLHSAYIGDVSTMGFSSQSKLIFFLDFTECFLVMAFENMLANCERFSLTTEEESTEVDVDRQTARVTGQSLGLSLIGKLLAPRFISNDVM
Homology
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BLAST of Lag0035588 vs. NCBI nr
Match: XP_022156185.1 (uncharacterized protein LOC111023135 [Momordica charantia] >XP_022156186.1 uncharacterized protein LOC111023135 [Momordica charantia])

HSP 1 Score: 54.3 bits (129), Expect = 9.8e-04
Identity = 27/57 (47.37%), Postives = 38/57 (66.67%), Query Frame = 0 

Query: 84  MAFENMLANCERFSLTTEEESTEVDVDRQTARVTGQSLGLSLIGKLLAPRFISNDVM 141
           M  EN+LA+ ++F LT+EE+   +DVD    ++  Q L  SL+GKLLA R IS DV+
Sbjct: 1   MDHENLLADWQKFKLTSEEDEIAMDVDVDAVKMAEQGLAYSLVGKLLAKRIISADVL 57

The following BLAST results are available for this feature:
BLAST of Lag0035588 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022156185.19.8e-0447.37uncharacterized protein LOC111023135 [Momordica charantia] >XP_022156186.1 uncha... [more]
BLAST of Lag0035588 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0035588.1Lag0035588.1mRNA