Lag0035386 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0035386
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
Descriptioncleavage stimulating factor 64
Locationchr3: 20698417 .. 20703805 (-)
RNA-Seq ExpressionLag0035386
SyntenyLag0035386
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATGATGGCTCTCTCAGGGAAAAATAAAGAAGGTTTTATCGATGGATCCATTAAGAAACCGACTTCTTCAAAACTGGCAAAGGCTTGGAAGTGCAACAATGACATTATAGCTTCTTGGATTATAAATTTTGTTTCCAAGGAGATTGCCGCAAGTATTGTCTACTCTGGTTGTGTCAAAGATGTTTGGGACGAATTGGTAGATCGATTTAAGGAAATCAATGGACAGAAAATTTATCAATTGCGCAAAGAGTTGATAACTACTACTCAAGGTATGCATTCTGTCAAAGCCTATTTCACAAAATTGAAGACGATATGACAATATCTCAATGATTTTCGCCCTCACATTGAATGCACTTGTGATAAACTTAAGCCTTTTCTTGAACATCTAGAATCAGAGTATATTATGATATTTTTTATGGGATTAAATGATCGGTATGCTCCTATTAGAACTCAAATTTTACTGATCACTACTACAAATTTGACTTTTATTGACGCTTGGCTTTTTAGATTTGTTGACACTTGTATCAAGAAAACGTCAATAAAGAAAATAAATTATTAATAAAAGATAGGTATATTGACGGTTATATTGTGTCAACAAATGATCTCGTCTATGTTGACGATTAAAAAACGTCAATGAATGTTATTAAAAGATTAATTTACGTAGATTTTCGTCCAATTCCGCCTTTTCACATAGTTGACGGACAAAAACCATCAATGAAAAGGGTTTTGTTGACGGTTTTTATTGACGCTTATTAGCTGTCAATGAAAACCGCATTCATTGACGGCTAATAAGTGTCAATAAACATTACTATATTGACGCGCAATAAACGTCAATATGAATGAGGGTTTCTTGACGGGTATTAAACATCAAAAAGTTTAAGCTTTTTTACGATTTAAGTTTAAATTACTCCAAATTTGAAGTGATTTTAGGAGTTTAAATTGGATTCTTAATTGTAAAAAAAGATAAAGTAAAAAAAAAAAAAGAAACCCAAGACTCTCCTCTGTTTTGTTTGTTTGAGGGGATTAAGAAAATAAAAGAAAAAGGAAAAATAAGAAATAAAGATAAAGAAACAAAAACCTAAGCTTCTTCCTCATTCAAAAAAAACCTTAAGCTTCTTCCTCATTCTCTCTTTTTCCCTCTCCATGTCGTAACCCCCTCCCCCTTGCCAACTAGGTCGCCGCCCTTCCTCGTCGTTTTCGTCTTGGCACAGCAAGGTCGCACAACCCTGTGCCGTTTTCTTTGCAGACGGTCGTTACACACGCGCTCACGCTCCTGCGCAAATTTTTTTATAAAGTTGAATGCAGGTAAGAGCGCTAATGGAAAAAAACCATTCTTAGGTTTTTATCCTTTTCTCCTCTTGGTAGAAACGTTGTCATAAGAAATATCTACAGAATTGCTTGTGTAATTTGTTATGAAGGAGGCAGATGATTGCTAATCCAGAAGCTAGACCTTCTCTTTTGCCTCACCCTTCCTTATCAGATGCAAATTTTCAGCCTGGGCCCTCCACAGCGTATAGTGCATCTCAAATAGTTGGTAGTGATGTTGATAAGTCTTCTCAAGTTCCTCTTGGTGTAGATGGTAAAAGAAATATACTTCATGACTTTTCAGGAACAACTAATCGCCCTGTAAAGCAGATAAAATTAGAGGATGGAAAAAGCAACCCTTTTTCAGCTGGAGGTCTAAGTGCATCAGTAGGTACCAATGGATTGGACAACTTAGAATTGCCTCAGATCCCAATGTGGCGGAAATGCAAATCTCTGAGAAACCAACTTCAGTGGTACGTGATTTATCGCAATGCAACATCACAAATTGAAAAACATTTACTCACTTTCTTGTTCATGTTGATTGGTTGCATTGTTCTTCAGAGTTCTCTATCCGAATTGGTTCTTTCTAGGTCTCAGTGTCATCTCATGTAGGAGATCAGTATAATATTTGTGATTGTCTTTTGACGTATTTAGAGGGAGTTTGATATTGGGATGCCTCTTGAGGGCAGTGCTTTTAAATGACATTTTTCCAAAAACCATTACTAATTAAGTGCTTACTCATTTAAGTGTTTTTAGAACTTTCAAAGTCACTTTTGACTCTGCTGTTTCTTACCTCTAAATTCAATTGTTAATCCTTAAGGCATCAACCGTCCACTAGTAAGATGAAACATGGCTACTTTCATTCATAACAGAAAAAATATAGCTAAAATTTTAATTGTTCGAATCAGGGAAAATTAATAAACTCTGCATGTAGAACAAGTAGAATTTGCTGAGATAACTGAAAAACAAATATCGGAGATCTGGTTCGTATTTCTATTATTGGTGAATTCTCTCTAAAGCATCTAGTTTTAGTTCCAAGTATGTGGCCCAAAATGCTCATAGCAGAATACCATCATGGATTGAGAATTTTGTCAGTCCATCAGTTTTAGCTCAAAAACATGTCATTTTCTTTCTGTGCTTAGATATGTTAAAATGTCTTGCTAGTAAGTTCCATCTATGCCAAGATTTGAGCATGTTGCAAAATTCAACATTCTGGTGAAGTTGATTGATTTCTTCTAAATCACAACTGAGAAAACTAGCACTTCTGTTTCTTGTTTTGTTGTATCTTCTTCCTCCACAGCTTCCCCGCGATGTCAAGTCTGCACTACTTCAACAAGTTTTGAATCTAACTCCCGAACAGCTTAACTCGTTGTCGCTCGAACAGAGCCAGCAAGTTGTTAAGCTCCAGCAAGCACTTCGCAGAGATCAAATGCAACCATCCTAGCAAACAAATTGCCACTGATCAACCCGACACTCTCGGCAGCTCCGCTCCGAGCAACAACTGCTGGCAGGTACCAGATTCAGCTAAGTAGGTTGTAAAATATTTGGCTCCACAAAGATTCAGCAAGTGACAATCTAAACACCTGTAAAATTATTGCTTGCCGAAGGGGTCCAAAAGCGACAGGTCCTGCCAACAAGGTATGAGTTTCATAAACAACATTCATGTAAGGCTTACAAGTTTGTGATTATAGTGATTCCTAAATTTTTATGAAGGATGTTTTTCAAATAAATCATCTCAATGGAATGAAATAGTAAAGTTATCTGATGATTTTGGTCAACTTCTTGCATTTTCTCAATGTTTTCTTTGTTATCTAAGATCAAAATTGTATGTGGATTTTCCCACAACTTGTGGATGGAAGTTGCTTGATGATTGTATTCAAGCGAGGAGAAATTGTTCACTATTTTTGTTCCTAAAATACAATACCACGGAAAATAATATGCAAACTCAATTATGTAAAATCTTCTTATCATCCATTATTGCAGGGGTTTTGTTATACTTTTAAATTGTGCTATCAATGTTGTGTTTTCTCCCATTTCAAACACAATTTAATGGTTCAATAAAGCGTTGAAGATGGATATGCTCCACACATAAATATATTTTATTGTAGATCTCCATTGCTTTAATCTTGTTAGTCTAAATTAAATCTTTTGATCTCTCGAATTTCGTATGTGAACATCACGTTTAATTCAAATCACCACTTTACTTTCTTGTACCATTTTTAATTTTTGAAATTGATATCCTGTCTCATAAATGTTTCAACTCTTTGGAATATATTCTTGAAAGTTATATCATACTTATTGCCAACGAATGTTTTATACAAATTTATTTAGTAGAAGAATTTAATTCAAGGAGTTAGAAAAGCATGCTTTAACATGTATCATATGAAATGAATACACCTCAAAGTGCATGACATGTCTCATTCTGAAAATTGAAGTTAAACTAGCTTTGTGTTAGGAATTTATTTTAGTTTGTTAATACCATGTTCGCAACCATTCTGAAAATTTAATTGGGGGATGTGTCCTATGTGGTTAGATTGTGAATTTGATTTTGATTTAGTTACTGGGTTTTTTATAGTTATGAACTCTTGTTTGGTTGCAGGCAAGGTGCAGTTGATTAATCAATTCCTTGTGAATAAAAGTTGGTACATTCTTATATTGTGATTAATCACTTCCTGGTTAGATTGTGAATTTGATTTTGAATTGGTTATTAGGTGTTAATTCTTGAATGTTCCCCTAGTTAGTTATTCATGATTCCAAGGCTTCAAATTAGTAGCAGTGTATCGTGGGCATTGTTTGTGATTAATTTTCTTCTATATACCTTCATGATTTCTGGTTGGTTTCATATATATATATATTTTTAAAAATGCTTATGGGAGTCTACTGTGGTGTTCCTTCTTACGTGCTTGAAAAAGTTCATGGAGATCTAATTGGGACAACATTAATTAGAAACAAATACTACCACTCATGCTCTGTTGATAATTAACACAGGTTAACTTTGTTTGAAGTTACATTTTTTTTCCAGTATTTTAATATATGTTATTTTCTTGAAGTTATATATATATAGGCTGAAGAGTTATTTATTAGATCAATCTCATGTTCAATTGGAATCTAAATAATACTAGTTTTTGTTTTTTTGTTGATAGTTTTTGTTGATAATTGTCCTCTAGCCCTTTTCTAATGCTACAAACTGTATTACTTTCAACTTAGTTCCATGTTGAGTCATGTAGATACATTATATCTTTGGGTGTAAGTTCCTTTTTTGGTGGCTAATAAGAGGATAAATGCACTTTTTAATAGGATGTGTTAAGAGTATCACTTATCAAAAGACTTGTAAAATTCTTAGACTTGTAAGTTCCTTATGAATGACCCATTCTATTTTGTGTTGTATAATTGTCCTCTAGCCATGGTAAATCTTTTGCAAGTTTTAAATGTAAATAAGGATGTTGCGCTATCTTAGCAAGTTTTCATCCCAAAACACATACATGAATGCCACTACCCCTCTTCTTATAAGTTAGTTAAGTATTGTTATTATGGTCATAAGTATTGATTAATTTAATTGTTCGTCTGTCCTATTTTGTTGAGTTTAATATTTATGTTCATGATAAGTCTAGTTGATATGTTCCTAAGTTTTGATGAGCTTAGTTTAATTGTTATATTCACGTTTCGATAACTTTAATAATTCGTGTTAGTTTTTTATGAGTCTAATATTTGTGTTCATTTTAAATTTGGTTGTTATGTTCTTAAGTTTTTCTGTGTTTGTTTAATTGTTATGTTCATGATTTTTTATAAGTTATTTAAGAGTTTGATATTGATATTCAATAAAGTTTTATAACTTTAGTTGTTTGCGTTAATTTGATGAGTTTAGTTGTCTATGTTTCTTTGAGTATATGTATTCATACCTCAAATCTTAAATCTCGTCAATGGCTTCAAGTACAAATTGCACCACGTTCAATCAACTTTCAAAGAGTTATAAGTTTGTTGTTGTGTACTATTTGTCATAGGCCAAAACCAAAGCAAAGGAGAAGCTCCTTGCCAAGGAAGCTGCTCAAAGGGTGCTAAGTGATCGTTTTGAGTTTAAATGA

mRNA sequence

ATGATGATGGCTCTCTCAGGGAAAAATAAAGAAGGTTTTATCGATGGATCCATTAAGAAACCGACTTCTTCAAAACTGGCAAAGGCTTGGAAGTGCAACAATGACATTATAGCTTCTTGGATTATAAATTTTGTTTCCAAGGAGATTGCCGCAAGTATTGTCTACTCTGGTTGTGTCAAAGATGTTTGGGACGAATTGGTCGCCGCCCTTCCTCGTCGTTTTCGTCTTGGCACAGCAAGGTCGCACAACCCTGTGCCGTTTTCTTTGCAGACGGTCGTTACACACGCGCTCACGCTCCTGCGCAAATTTTTTTATAAAGTTGAATGCAGGAGGCAGATGATTGCTAATCCAGAAGCTAGACCTTCTCTTTTGCCTCACCCTTCCTTATCAGATGCAAATTTTCAGCCTGGGCCCTCCACAGCGTATAGTGCATCTCAAATAGTTGGTAGTGATGTTGATAAGTCTTCTCAAGTTCCTCTTGGTGTAGATGGTAAAAGAAATATACTTCATGACTTTTCAGGAACAACTAATCGCCCTGTAAAGCAGATAAAATTAGAGGATGGAAAAAGCAACCCTTTTTCAGCTGGAGGTCTAAGTGCATCAGTAGGTACCAATGGATTGGACAACTTAGAATTGCCTCAGATCCCAATGTGGCGGAAATGCAAATCTCTGAGAAACCAACTTCAGTGCTTAACTCGTTGTCGCTCGAACAGAGCCAGCAAGTTGTTAAGCTCCAGCAAGCACTTCGCAGAGATCAAATGCAACCATCCTAGCAAACAAATTGCCACTGATCAACCCGACACTCTCGGCAGCTCCGCTCCGAGCAACAACTGCTGGCAGGCCAAAACCAAAGCAAAGGAGAAGCTCCTTGCCAAGGAAGCTGCTCAAAGGGTGCTAAGTGATCGTTTTGAGTTTAAATGA

Coding sequence (CDS)

ATGATGATGGCTCTCTCAGGGAAAAATAAAGAAGGTTTTATCGATGGATCCATTAAGAAACCGACTTCTTCAAAACTGGCAAAGGCTTGGAAGTGCAACAATGACATTATAGCTTCTTGGATTATAAATTTTGTTTCCAAGGAGATTGCCGCAAGTATTGTCTACTCTGGTTGTGTCAAAGATGTTTGGGACGAATTGGTCGCCGCCCTTCCTCGTCGTTTTCGTCTTGGCACAGCAAGGTCGCACAACCCTGTGCCGTTTTCTTTGCAGACGGTCGTTACACACGCGCTCACGCTCCTGCGCAAATTTTTTTATAAAGTTGAATGCAGGAGGCAGATGATTGCTAATCCAGAAGCTAGACCTTCTCTTTTGCCTCACCCTTCCTTATCAGATGCAAATTTTCAGCCTGGGCCCTCCACAGCGTATAGTGCATCTCAAATAGTTGGTAGTGATGTTGATAAGTCTTCTCAAGTTCCTCTTGGTGTAGATGGTAAAAGAAATATACTTCATGACTTTTCAGGAACAACTAATCGCCCTGTAAAGCAGATAAAATTAGAGGATGGAAAAAGCAACCCTTTTTCAGCTGGAGGTCTAAGTGCATCAGTAGGTACCAATGGATTGGACAACTTAGAATTGCCTCAGATCCCAATGTGGCGGAAATGCAAATCTCTGAGAAACCAACTTCAGTGCTTAACTCGTTGTCGCTCGAACAGAGCCAGCAAGTTGTTAAGCTCCAGCAAGCACTTCGCAGAGATCAAATGCAACCATCCTAGCAAACAAATTGCCACTGATCAACCCGACACTCTCGGCAGCTCCGCTCCGAGCAACAACTGCTGGCAGGCCAAAACCAAAGCAAAGGAGAAGCTCCTTGCCAAGGAAGCTGCTCAAAGGGTGCTAAGTGATCGTTTTGAGTTTAAATGA

Protein sequence

MMMALSGKNKEGFIDGSIKKPTSSKLAKAWKCNNDIIASWIINFVSKEIAASIVYSGCVKDVWDELVAALPRRFRLGTARSHNPVPFSLQTVVTHALTLLRKFFYKVECRRQMIANPEARPSLLPHPSLSDANFQPGPSTAYSASQIVGSDVDKSSQVPLGVDGKRNILHDFSGTTNRPVKQIKLEDGKSNPFSAGGLSASVGTNGLDNLELPQIPMWRKCKSLRNQLQCLTRCRSNRASKLLSSSKHFAEIKCNHPSKQIATDQPDTLGSSAPSNNCWQAKTKAKEKLLAKEAAQRVLSDRFEFK
Homology
[Close]
BLAST of Lag0035386 vs. NCBI nr
Match: XP_038885247.1 (LOW QUALITY PROTEIN: cleavage stimulating factor 64 [Benincasa hispida])

HSP 1 Score: 175.6 bits (444), Expect = 6.4e-40
Identity = 86/103 (83.50%), Postives = 92/103 (89.32%), Query Frame = 0 

Query: 114 IANPEARPSLLPHPSLSDANFQPGPSTAYSASQIVGSDVDKSSQVPLGVDGKRNILHDFS 173
           IANPEA+PSLLPHPSLSDA+FQPGPSTAY AS IVGSDVDKSSQVPLGVDGKRN+LH FS
Sbjct: 362 IANPEAKPSLLPHPSLSDADFQPGPSTAYGASPIVGSDVDKSSQVPLGVDGKRNVLHGFS 421

Query: 174 GTTNRPVKQIKLEDGKSNPFSAGGLSASVGTNGLDNLELPQIP 217
           GTTNRPVKQIKLEDGK +PFSAGGLSAS+GTNG   L +   P
Sbjct: 422 GTTNRPVKQIKLEDGKGSPFSAGGLSASLGTNGSGQLGISSDP 464

[Close]
BLAST of Lag0035386 vs. NCBI nr
Match: XP_008456694.1 (PREDICTED: cleavage stimulating factor 64 [Cucumis melo] >KAA0031656.1 cleavage stimulating factor 64 [Cucumis melo var. makuwa] >TYK04454.1 cleavage stimulating factor 64 [Cucumis melo var. makuwa])

HSP 1 Score: 166.0 bits (419), Expect = 5.1e-37
Identity = 80/103 (77.67%), Postives = 87/103 (84.47%), Query Frame = 0 

Query: 114 IANPEARPSLLPHPSLSDANFQPGPSTAYSASQIVGSDVDKSSQVPLGVDGKRNILHDFS 173
           I NPEA+PSLLPHPS+SD +FQPGPSTAYS  QIVGSDVDKSS VPLGVDGKR +LH FS
Sbjct: 364 ITNPEAKPSLLPHPSISDVDFQPGPSTAYSTPQIVGSDVDKSSPVPLGVDGKRTMLHGFS 423

Query: 174 GTTNRPVKQIKLEDGKSNPFSAGGLSASVGTNGLDNLELPQIP 217
           GTTNRPVKQIKLEDGK +PFSAGGLS S+GTNG   L +   P
Sbjct: 424 GTTNRPVKQIKLEDGKGSPFSAGGLSTSIGTNGSGQLGIASDP 466

[Close]
BLAST of Lag0035386 vs. NCBI nr
Match: KAG7016387.1 (Cleavage stimulating factor 64 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 165.6 bits (418), Expect = 6.6e-37
Identity = 81/103 (78.64%), Postives = 90/103 (87.38%), Query Frame = 0 

Query: 114 IANPEARPSLLPHPSLSDANFQPGPSTAYSASQIVGSDVDKSSQVPLGVDGKRNILHDFS 173
           IA+PEA+PSLLPHPSLSDA+FQPGP+TA S SQIVGSD+DKSS VPLGVDGKRN+LH FS
Sbjct: 364 IADPEAKPSLLPHPSLSDADFQPGPATANSTSQIVGSDIDKSSLVPLGVDGKRNMLHGFS 423

Query: 174 GTTNRPVKQIKLEDGKSNPFSAGGLSASVGTNGLDNLELPQIP 217
           GTTNRPVKQIKLEDGK  PFS+GGLSAS+GTNG   L +   P
Sbjct: 424 GTTNRPVKQIKLEDGKGIPFSSGGLSASIGTNGSGQLGIASDP 466

[Close]
BLAST of Lag0035386 vs. NCBI nr
Match: XP_022939679.1 (cleavage stimulating factor 64-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 165.6 bits (418), Expect = 6.6e-37
Identity = 81/103 (78.64%), Postives = 90/103 (87.38%), Query Frame = 0 

Query: 114 IANPEARPSLLPHPSLSDANFQPGPSTAYSASQIVGSDVDKSSQVPLGVDGKRNILHDFS 173
           IA+PEA+PSLLPHPSLSDA+FQPGP+TA S SQIVGSD+DKSS VPLGVDGKRN+LH FS
Sbjct: 358 IADPEAKPSLLPHPSLSDADFQPGPATANSTSQIVGSDIDKSSLVPLGVDGKRNMLHGFS 417

Query: 174 GTTNRPVKQIKLEDGKSNPFSAGGLSASVGTNGLDNLELPQIP 217
           GTTNRPVKQIKLEDGK  PFS+GGLSAS+GTNG   L +   P
Sbjct: 418 GTTNRPVKQIKLEDGKGIPFSSGGLSASIGTNGSGQLGIASDP 460

[Close]
BLAST of Lag0035386 vs. NCBI nr
Match: KAG6578854.1 (Cleavage stimulating factor 64, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 165.6 bits (418), Expect = 6.6e-37
Identity = 81/103 (78.64%), Postives = 90/103 (87.38%), Query Frame = 0 

Query: 114 IANPEARPSLLPHPSLSDANFQPGPSTAYSASQIVGSDVDKSSQVPLGVDGKRNILHDFS 173
           IA+PEA+PSLLPHPSLSDA+FQPGP+TA S SQIVGSD+DKSS VPLGVDGKRN+LH FS
Sbjct: 358 IADPEAKPSLLPHPSLSDADFQPGPATANSTSQIVGSDIDKSSLVPLGVDGKRNMLHGFS 417

Query: 174 GTTNRPVKQIKLEDGKSNPFSAGGLSASVGTNGLDNLELPQIP 217
           GTTNRPVKQIKLEDGK  PFS+GGLSAS+GTNG   L +   P
Sbjct: 418 GTTNRPVKQIKLEDGKGIPFSSGGLSASIGTNGSGQLGIASDP 460

[Close]
BLAST of Lag0035386 vs. ExPASy TrEMBL
Match: A0A5D3BZN4 (Cleavage stimulating factor 64 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold409G00590 PE=4 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 2.5e-37
Identity = 80/103 (77.67%), Postives = 87/103 (84.47%), Query Frame = 0 

Query: 114 IANPEARPSLLPHPSLSDANFQPGPSTAYSASQIVGSDVDKSSQVPLGVDGKRNILHDFS 173
           I NPEA+PSLLPHPS+SD +FQPGPSTAYS  QIVGSDVDKSS VPLGVDGKR +LH FS
Sbjct: 364 ITNPEAKPSLLPHPSISDVDFQPGPSTAYSTPQIVGSDVDKSSPVPLGVDGKRTMLHGFS 423

Query: 174 GTTNRPVKQIKLEDGKSNPFSAGGLSASVGTNGLDNLELPQIP 217
           GTTNRPVKQIKLEDGK +PFSAGGLS S+GTNG   L +   P
Sbjct: 424 GTTNRPVKQIKLEDGKGSPFSAGGLSTSIGTNGSGQLGIASDP 466

[Close]
BLAST of Lag0035386 vs. ExPASy TrEMBL
Match: A0A1S3C3F6 (cleavage stimulating factor 64 OS=Cucumis melo OX=3656 GN=LOC103496563 PE=4 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 2.5e-37
Identity = 80/103 (77.67%), Postives = 87/103 (84.47%), Query Frame = 0 

Query: 114 IANPEARPSLLPHPSLSDANFQPGPSTAYSASQIVGSDVDKSSQVPLGVDGKRNILHDFS 173
           I NPEA+PSLLPHPS+SD +FQPGPSTAYS  QIVGSDVDKSS VPLGVDGKR +LH FS
Sbjct: 364 ITNPEAKPSLLPHPSISDVDFQPGPSTAYSTPQIVGSDVDKSSPVPLGVDGKRTMLHGFS 423

Query: 174 GTTNRPVKQIKLEDGKSNPFSAGGLSASVGTNGLDNLELPQIP 217
           GTTNRPVKQIKLEDGK +PFSAGGLS S+GTNG   L +   P
Sbjct: 424 GTTNRPVKQIKLEDGKGSPFSAGGLSTSIGTNGSGQLGIASDP 466

[Close]
BLAST of Lag0035386 vs. ExPASy TrEMBL
Match: A0A6J1FMA3 (cleavage stimulating factor 64-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111445495 PE=4 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 3.2e-37
Identity = 81/103 (78.64%), Postives = 90/103 (87.38%), Query Frame = 0 

Query: 114 IANPEARPSLLPHPSLSDANFQPGPSTAYSASQIVGSDVDKSSQVPLGVDGKRNILHDFS 173
           IA+PEA+PSLLPHPSLSDA+FQPGP+TA S SQIVGSD+DKSS VPLGVDGKRN+LH FS
Sbjct: 358 IADPEAKPSLLPHPSLSDADFQPGPATANSTSQIVGSDIDKSSLVPLGVDGKRNMLHGFS 417

Query: 174 GTTNRPVKQIKLEDGKSNPFSAGGLSASVGTNGLDNLELPQIP 217
           GTTNRPVKQIKLEDGK  PFS+GGLSAS+GTNG   L +   P
Sbjct: 418 GTTNRPVKQIKLEDGKGIPFSSGGLSASIGTNGSGQLGIASDP 460

[Close]
BLAST of Lag0035386 vs. ExPASy TrEMBL
Match: A0A6J1FHX2 (cleavage stimulating factor 64-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111445495 PE=4 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 3.2e-37
Identity = 81/103 (78.64%), Postives = 90/103 (87.38%), Query Frame = 0 

Query: 114 IANPEARPSLLPHPSLSDANFQPGPSTAYSASQIVGSDVDKSSQVPLGVDGKRNILHDFS 173
           IA+PEA+PSLLPHPSLSDA+FQPGP+TA S SQIVGSD+DKSS VPLGVDGKRN+LH FS
Sbjct: 358 IADPEAKPSLLPHPSLSDADFQPGPATANSTSQIVGSDIDKSSLVPLGVDGKRNMLHGFS 417

Query: 174 GTTNRPVKQIKLEDGKSNPFSAGGLSASVGTNGLDNLELPQIP 217
           GTTNRPVKQIKLEDGK  PFS+GGLSAS+GTNG   L +   P
Sbjct: 418 GTTNRPVKQIKLEDGKGIPFSSGGLSASIGTNGSGQLGIASDP 460

[Close]
BLAST of Lag0035386 vs. ExPASy TrEMBL
Match: A0A6J1JW71 (cleavage stimulating factor 64-like isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111489426 PE=4 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 9.3e-37
Identity = 81/103 (78.64%), Postives = 89/103 (86.41%), Query Frame = 0 

Query: 114 IANPEARPSLLPHPSLSDANFQPGPSTAYSASQIVGSDVDKSSQVPLGVDGKRNILHDFS 173
           IA+PEA+PSLLPHPSLSDA+FQPGPSTA S SQIVGSD+DKSS VPLGVDGKRN+LH FS
Sbjct: 364 IADPEAKPSLLPHPSLSDADFQPGPSTANSTSQIVGSDIDKSSLVPLGVDGKRNMLHGFS 423

Query: 174 GTTNRPVKQIKLEDGKSNPFSAGGLSASVGTNGLDNLELPQIP 217
           GTT+RPVKQIKLEDGK  PFS GGLSAS+GTNG   L +   P
Sbjct: 424 GTTDRPVKQIKLEDGKGIPFSPGGLSASIGTNGSGQLGIASDP 466

The following BLAST results are available for this feature:
BLAST of Lag0035386 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038885247.16.4e-4083.50LOW QUALITY PROTEIN: cleavage stimulating factor 64 [Benincasa hispida][more]
XP_008456694.15.1e-3777.67PREDICTED: cleavage stimulating factor 64 [Cucumis melo] >KAA0031656.1 cleavage ... [more]
KAG7016387.16.6e-3778.64Cleavage stimulating factor 64 [Cucurbita argyrosperma subsp. argyrosperma][more]
XP_022939679.16.6e-3778.64cleavage stimulating factor 64-like isoform X2 [Cucurbita moschata][more]
KAG6578854.16.6e-3778.64Cleavage stimulating factor 64, partial [Cucurbita argyrosperma subsp. sororia][more]
BLAST of Lag0035386 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Lag0035386 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3BZN42.5e-3777.67Cleavage stimulating factor 64 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s... [more]
A0A1S3C3F62.5e-3777.67cleavage stimulating factor 64 OS=Cucumis melo OX=3656 GN=LOC103496563 PE=4 SV=1[more]
A0A6J1FMA33.2e-3778.64cleavage stimulating factor 64-like isoform X1 OS=Cucurbita moschata OX=3662 GN=... [more]
A0A6J1FHX23.2e-3778.64cleavage stimulating factor 64-like isoform X2 OS=Cucurbita moschata OX=3662 GN=... [more]
A0A6J1JW719.3e-3778.64cleavage stimulating factor 64-like isoform X3 OS=Cucurbita maxima OX=3661 GN=LO... [more]
BLAST of Lag0035386 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029472Retrotransposon Copia-like, N-terminalPFAMPF14244Retrotran_gag_3coord: 1..21
e-value: 4.9E-7
score: 29.4
NoneNo IPR availablePANTHERPTHR37610:SF55SUBFAMILY NOT NAMEDcoord: 1..72
NoneNo IPR availablePANTHERPTHR37610FAMILY NOT NAMEDcoord: 1..72

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0035386.1Lag0035386.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042868 antisense RNA metabolic process
biological_process GO:0048589 developmental growth
biological_process GO:0031047 gene silencing by RNA
biological_process GO:0045892 negative regulation of transcription, DNA-templated
biological_process GO:0098789 pre-mRNA cleavage required for polyadenylation
cellular_component GO:0005847 mRNA cleavage and polyadenylation specificity factor complex
molecular_function GO:0003729 mRNA binding