Lag0035255 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0035255
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionUnknown protein
Locationchr3: 17543569 .. 17545787 (-)
RNA-Seq ExpressionLag0035255
SyntenyLag0035255
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATATCCAAGCAAGGGGATATTAGAAGAACAGTGATGGATTCAAGGATTAGGAAAATAAATTTGAAGTCAAGCAAAGGTGAGATCAATAATGGAAGGGCTCGGTAAAAATTATAGAGGAAATGCTTATAATATAATCCTAAGAAATTGCCAACTATTTTTGCTACATATCTACATCAAACTCATAATTAACTATTCCTATTTTTTATATTGTCCTTTGAAATCTCACAATACTCTTTCTCATCCTTCCCTGCAACACTTCGCCCCTAACCTTGATCACTCATTGTCCACCAGTTTTAATTACAAAATTTGATTTAACCATGCAAAAGCAATATATAAAAAGTTTAACGTACTTAAATTTTATAGTAAATTGTTTTAGCTTCAAAAAGTGGAGAGTCCTATATTAACTAGATGTTCGGTATCTAAAACTTGTTAGTGGATTGAGCAAGGAGGTGATGAAAATAGATAGTCATAATGATGTAACTGATCCAATAAAGAAACAATAGAGGTGATTAGACATTGATTGCTGCAAAAAAAAAATGGCAAATCTAAAATATATATATATATACATTTATGTTTAAAAATTAAAAAGATATACATTAGGATATTTTAAATATAAAATCACATAACAAAAAAGTTTGAGAAATAAGAGATTTAGCCGGAAAATTCAAATACAAAGTTATTTGAGTGTGGGAGGTAAATACCAGCGGCTCTAGACGAAGAAGTTGCAAGAGTTTCACCATGTTTGTAAAGTTTCCTCGATGTGAAAACCAATGGAAGAACTTGATGTGAAAACTAATGGAAGAACGTGAAATATTTATAGAAAGAATTTAAATTCAAATTCTAATTTGATTAGATTTTGGATCAAATCTACGGACCATAAATTAAAATATATAGACCATAATATTAATCTATGTTATTAAATTTTATAAGATAAAAATAATATTAATTACAAAAAAAGAATACCTTTAAAAAAAGAAAAAAAAAGAATAAAAAGCAAAATTTAATATCATAAGATATTATTCTGTTATTAAATTTTATATTTGAAAAAATAACATTCGATTTTGACAATTAAAAAATATATTTATTTCTTTACTTTTTTTTTATATTTTATAACTAAAACAATTTCGAAATTTGATTCTTTTTTTTAATATTTTTTAATTAAAAAGATTATTTTTTCGTTTTTCTTTTTTTTTAATTAAAACAATTTAAAAACTTGATTTAGAAAATTGAAAACTAATTAATTTTAATAGGTTATAGATTAAAAAAATAAAAAAATACCCTATTTGTTTTTATTAAAAAAAAAGAAAAATAAAAAAAAGGGAAAAATACACTTTTAGTCCCTGAGGTGTGGGTTAAGTGACAGTTTGGTCCCTGAGTTTTCAAACTCAACAAAAATACCCCTGAGTTTTGAGATAAGGAGCATTTTGGTCCCTGCCATCAACTTTTCTGTTAAATTTTAACAATTGCTGACGTGGCACTATTATTTTAATAAAGAAAATTATTTTTAAAATAAAAAAATAAAAAAATATTATTATTATTTTTAATTATTTAATTTTTTCTCCATCTCTCTTTACTTCCCTTCTTCTTCTCCATCTTCTTCCTCTTCATCCTTTCATTCTTCTTCTTCATATCTCCGGTGCCGGCGGCCACCACTCGCCGGCGCCGGCGCCGGCCGCCGGCAACTCTCTTTTTTTTTCTTCTCTCCCTCTCCTTTTCTTTTTCTTTCTCCTCTTTTTACTGTTAAAAATAAAAAAAATAGAAACGAAGGGGGAAAACCCCCTTCGATTCCGGCGCCGGAGAGGGAGGAGGGTCATCCCTCCTCTGTCTCGCCACTAGAGACGGAGGAGGGGGGAGGGTCCTCCCTCCTCTGTCTCGCCGCTGGAGACGGAGGAGGGAGGTCCCTCCTCCCTCCTCATTCCAGATCTGGAACGGGGAGTCCCTCCCTCTTCGGCGCCGAAATCGAAGGGCGTTTTCCCCCTTCGTTTCTATTTTTTTTTACAGTAAAAAGAGGGAGAAAGAAAAAGAAAGGGAGAGGGAGAGAAAAAAAAAAGAGAGTTGTCAGCGGCCGGCGCCGGCGCCGGCGAGTGGTGGTCGCCGGCCGCCAGCCGCCGGCCACAGGAGATATGAAGAAGAAGAATGAAAGGATGAAGAGGAAGAAGATGGAGAAGAAGATGGAGAAGAAGAAGGGAAGTAAAGAGAGATGGAGAAAAAATTAA

mRNA sequence

ATGATATCCAAGCAAGGGGATATTAGAAGAACAGTGATGGATTCAAGGATTAGGAAAATAAATTTGAAGTCAAGCAAAGGTGAGATCAATAATGGAAGGGCTCGAAACGAAGGGGGAAAACCCCCTTCGATTCCGGCGCCGGAGAGGGAGGAGGGTCATCCCTCCTCTGTCTCGCCACTAGAGACGGAGGAGGGGGGAGGGTCCTCCCTCCTCTGTCTCGCCGCTGGAGACGGAGGAGGGAGGTCCCTCCTCCCTCCTCATTCCAGATCTGGAACGGGGAGTCCCTCCCTCTTCGGCGCCGAAATCGAAGGGCGTTTTCCCCCTTCGTTTCTATTTTTTTTTACAGTAAAAAGAGGGAGAAAGAAAAAGAAAGGGAGAGGGAGAGAAAAAAAAAAGAGAGTTGTCAGCGGCCGGCGCCGGCGCCGGCGAGTGGTGGTCGCCGGCCGCCAGCCGCCGGCCACAGGAGATATGAAGAAGAAGAATGAAAGGATGAAGAGGAAGAAGATGGAGAAGAAGATGGAGAAGAAGAAGGGAAGTAAAGAGAGATGGAGAAAAAATTAA

Coding sequence (CDS)

ATGATATCCAAGCAAGGGGATATTAGAAGAACAGTGATGGATTCAAGGATTAGGAAAATAAATTTGAAGTCAAGCAAAGGTGAGATCAATAATGGAAGGGCTCGAAACGAAGGGGGAAAACCCCCTTCGATTCCGGCGCCGGAGAGGGAGGAGGGTCATCCCTCCTCTGTCTCGCCACTAGAGACGGAGGAGGGGGGAGGGTCCTCCCTCCTCTGTCTCGCCGCTGGAGACGGAGGAGGGAGGTCCCTCCTCCCTCCTCATTCCAGATCTGGAACGGGGAGTCCCTCCCTCTTCGGCGCCGAAATCGAAGGGCGTTTTCCCCCTTCGTTTCTATTTTTTTTTACAGTAAAAAGAGGGAGAAAGAAAAAGAAAGGGAGAGGGAGAGAAAAAAAAAAGAGAGTTGTCAGCGGCCGGCGCCGGCGCCGGCGAGTGGTGGTCGCCGGCCGCCAGCCGCCGGCCACAGGAGATATGAAGAAGAAGAATGAAAGGATGAAGAGGAAGAAGATGGAGAAGAAGATGGAGAAGAAGAAGGGAAGTAAAGAGAGATGGAGAAAAAATTAA

Protein sequence

MISKQGDIRRTVMDSRIRKINLKSSKGEINNGRARNEGGKPPSIPAPEREEGHPSSVSPLETEEGGGSSLLCLAAGDGGGRSLLPPHSRSGTGSPSLFGAEIEGRFPPSFLFFFTVKRGRKKKKGRGREKKKRVVSGRRRRRRVVVAGRQPPATGDMKKKNERMKRKKMEKKMEKKKGSKERWRKN
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 157..186
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 161..186
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 118..146
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 118..186
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..100
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 9..23

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0035255.1Lag0035255.1mRNA